Peptidyl-prolyl cis-trans isomerase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G58450 |
| fragaria_vesca | FvH4_2g32840 FvH4_2g32840 FvH4_2g32840 FvH4_2g32840 |
| malus_domestica | MD02G1098400.v1.1 MD15G1067100.v1.1 |
| prunus_persica | Prupe.1G420900_v2.0.a1 |
| pyrus_communis | pycom04g01900 pycom15g06360 |
| rosa_chinensis | RchiOBHm_Chr6g0254891 RchiOBHm_Chr6g0309861 |
| rosa_laevigata | RLG00000010529 RLG00000033960 |
| rosa_multiflora | Rmu_co8350909.1_g000001 Rmu_sc0001554.1_g000012 Rmu_sc0002908.1_g000022 Rmu_sc0021683.1_g000001 Rmu_sc0028480.1_g000001 Rmu_sc0035432.1_g000001 Rmu_ssc0000373.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00116390 Rroxscaffold_7G00159100 Rroxscaffold_7G00210070 Rroxscaffold_7G00210620 |
| rosa_rugosa | Rorug06G0184100 Rorug06G0375400 |
| rosa_samantha | Rh4DG166900 Rh5DG417300 Rh6AG488900 Rh6BG498400 Rh6CG269800 Rh6CG503200 Rh6DG489400 |
| rosa_wichuraiana | Rw6G042570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 228 |
| AciI | CCGC | 1 cut(s) | 252 |
| AgsI | TTSAA | 1 cut(s) | 124 |
| Alw26I | GTCTC | 1 cut(s) | 246 |
| AsuHPI | GGTGA | 1 cut(s) | 158 |
| BbsI | GAAGAC | 1 cut(s) | 181 |
| BcoDI | GTCTC | 1 cut(s) | 246 |
| BmsI | GCATC | 1 cut(s) | 58 |
| BpiI | GAAGAC | 1 cut(s) | 181 |
| BpmI | CTGGAG | 1 cut(s) | 218 |
| BpuEI | CTTGAG | 2 cut(s) | 68, 122 |
| Bse118I | RCCGGY | 1 cut(s) | 65 |
| BseGI | GGATG | 1 cut(s) | 49 |
| BseRI | GAGGAG | 2 cut(s) | 110, 234 |
| BseYI | CCCAGC | 1 cut(s) | 153 |
| BsgI | GTGCAG | 1 cut(s) | 192 |
| BsiSI | CCGG | 1 cut(s) | 66 |
| BsmAI | GTCTC | 1 cut(s) | 246 |
| Bsp143I | GATC | 1 cut(s) | 105 |
| BspACI | CCGC | 1 cut(s) | 252 |
| BsrFI | RCCGGY | 1 cut(s) | 65 |
| BssAI | RCCGGY | 1 cut(s) | 65 |
| BssMI | GATC | 1 cut(s) | 105 |
| Bst4CI | ACNGT | 1 cut(s) | 74 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 55 |
| BstC8I | GCNNGC | 2 cut(s) | 67, 252 |
| BstF5I | GGATG | 1 cut(s) | 49 |
| BstKTI | GATC | 1 cut(s) | 108 |
| BstMAI | GTCTC | 1 cut(s) | 246 |
| BstMBI | GATC | 1 cut(s) | 105 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 55 |
| BstV2I | GAAGAC | 1 cut(s) | 181 |
| BtsCI | GGATG | 1 cut(s) | 49 |
| Cac8I | GCNNGC | 2 cut(s) | 67, 252 |
| Cfr10I | RCCGGY | 1 cut(s) | 65 |
| CviJI | RGCY | 2 cut(s) | 65, 153 |
| CviKI_1 | RGCY | 2 cut(s) | 65, 153 |
| DpnI | GATC | 1 cut(s) | 107 |
| DpnII | GATC | 1 cut(s) | 105 |
| EcoT22I | ATGCAT | 1 cut(s) | 60 |
| FaiI | YATR | 5 cut(s) | 60, 161, 209, 228, 256 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 104, 136 |
| FokI | GGATG | 1 cut(s) | 36 |
| GsaI | CCCAGC | 1 cut(s) | 157 |
| GsuI | CTGGAG | 1 cut(s) | 218 |
| HapII | CCGG | 1 cut(s) | 66 |
| HinfI | GANTC | 1 cut(s) | 130 |
| HpaII | CCGG | 1 cut(s) | 66 |
| HphI | GGTGA | 1 cut(s) | 158 |
| Hpy188I | TCNGA | 1 cut(s) | 110 |
| Hpy188III | TCNNGA | 2 cut(s) | 121, 201 |
| Hpy99I | CGWCG | 1 cut(s) | 74 |
| HpyAV | CCTTC | 5 cut(s) | 19, 94, 137, 143, 170 |
| HpyCH4III | ACNGT | 1 cut(s) | 74 |
| HpyCH4V | TGCA | 2 cut(s) | 58, 173 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 55 |
| KroI | GCCGGC | 1 cut(s) | 65 |
| KroNI | GCCGGC | 1 cut(s) | 67 |
| Kzo9I | GATC | 1 cut(s) | 105 |
| LmnI | GCTCC | 1 cut(s) | 28 |
| LpnPI | CCDG | 4 cut(s) | 79, 139, 206, 248 |
| LweI | GCATC | 1 cut(s) | 58 |
| MalI | GATC | 1 cut(s) | 107 |
| MboI | GATC | 1 cut(s) | 105 |
| MboII | GAAGA | 4 cut(s) | 125, 136, 139, 181 |
| MluCI | AATT | 1 cut(s) | 39 |
| MnlI | CCTC | 3 cut(s) | 88, 242, 255 |
| Mph1103I | ATGCAT | 1 cut(s) | 60 |
| MroNI | GCCGGC | 1 cut(s) | 65 |
| MseI | TTAA | 1 cut(s) | 20 |
| MspI | CCGG | 1 cut(s) | 66 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 55 |
| NaeI | GCCGGC | 1 cut(s) | 67 |
| NdeII | GATC | 1 cut(s) | 105 |
| NgoMIV | GCCGGC | 1 cut(s) | 65 |
| NsiI | ATGCAT | 1 cut(s) | 60 |
| PdiI | GCCGGC | 1 cut(s) | 67 |
| PfeI | GAWTC | 1 cut(s) | 130 |
| PsiI | TTATAA | 1 cut(s) | 228 |
| PspFI | CCCAGC | 1 cut(s) | 153 |
| SaqAI | TTAA | 1 cut(s) | 20 |
| Sau3AI | GATC | 1 cut(s) | 105 |
| SetI | ASST | 4 cut(s) | 90, 148, 226, 234 |
| SfaNI | GCATC | 1 cut(s) | 58 |
| SmlI | CTYRAG | 2 cut(s) | 83, 137 |
| SmoI | CTYRAG | 2 cut(s) | 83, 137 |
| Sse9I | AATT | 1 cut(s) | 39 |
| SsiI | CCGC | 1 cut(s) | 252 |
| TaaI | ACNGT | 1 cut(s) | 74 |
| TasI | AATT | 1 cut(s) | 39 |
| TfiI | GAWTC | 1 cut(s) | 130 |
| Tru1I | TTAA | 1 cut(s) | 20 |
| Tru9I | TTAA | 1 cut(s) | 20 |
| Zsp2I | ATGCAT | 1 cut(s) | 60 |