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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G19010 AT1G19010 AT1G74860 |
| fragaria_vesca | FvH4_5g16190 FvH4_5g16190 FvH4_6g49700 FvH4_6g49700 |
| malus_domestica | MD06G1183100.v1.1 MD09G1042200.v1.1 MD14G1189100.v1.1 MD17G1043600.v1.1 |
| prunus_persica | Prupe.3G275400_v2.0.a1 Prupe.3G275500_v2.0.a1 Prupe.5G181500_v2.0.a1 Prupe.5G181800_v2.0.a1 |
| pyrus_communis | pycom06g16210 pycom111g03310 pycom14g15680 pycom17g03890 |
| rosa_chinensis | RchiOBHm_Chr2g0169731 RchiOBHm_Chr7g0179941 |
| rosa_laevigata | RLG00000005308 RLG00000021897 |
| rosa_multiflora | Rmu_ssc0000247.1_g000001 Rmu_ssc0000389.1_g000031 |
| rosa_roxburghii | Rroxscaffold_2G00081840 Rroxscaffold_3G00273290 |
| rosa_rugosa | Rorug02G0542500 Rorug06G0429300 |
| rosa_samantha | Rh2BG627000 Rh2CG596500 Rh2DG637900 Rh7AG029800 Rh7BG029000 Rh7CG030600 Rh7DG030000 |
| rosa_wichuraiana | Rw2G050970 Rw7G002380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 549 |
| AccII | CGCG | 1 cut(s) | 109 |
| AciI | CCGC | 3 cut(s) | 23, 74, 77 |
| AclWI | GGATC | 3 cut(s) | 487, 570, 625 |
| AcoI | YGGCCR | 1 cut(s) | 654 |
| AcuI | CTGAAG | 3 cut(s) | 288, 633, 1175 |
| AcvI | CACGTG | 1 cut(s) | 83 |
| AfaI | GTAC | 3 cut(s) | 306, 507, 1031 |
| AflII | CTTAAG | 1 cut(s) | 1063 |
| AflIII | ACRYGT | 2 cut(s) | 82, 1032 |
| AgeI | ACCGGT | 1 cut(s) | 537 |
| AgsI | TTSAA | 6 cut(s) | 31, 220, 248, 865, 1039, 1076 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 240, 272 |
| Alw21I | GWGCWC | 1 cut(s) | 321 |
| Alw26I | GTCTC | 4 cut(s) | 8, 194, 825, 1155 |
| AlwI | GGATC | 3 cut(s) | 487, 570, 625 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 404, 446 |
| AoxI | GGCC | 1 cut(s) | 654 |
| ApeKI | GCWGC | 2 cut(s) | 223, 395 |
| AsiGI | ACCGGT | 1 cut(s) | 537 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 150 |
| AspLEI | GCGC | 1 cut(s) | 109 |
| AxyI | CCTNAGG | 1 cut(s) | 414 |
| BalI | TGGCCA | 1 cut(s) | 656 |
| BanII | GRGCYC | 1 cut(s) | 321 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 23, 55 |
| BauI | CACGAG | 1 cut(s) | 431 |
| BbrPI | CACGTG | 1 cut(s) | 83 |
| BbsI | GAAGAC | 3 cut(s) | 663, 704, 1124 |
| Bbv12I | GWGCWC | 1 cut(s) | 321 |
| BbvCI | CCTCAGC | 1 cut(s) | 287 |
| BbvI | GCAGC | 2 cut(s) | 235, 382 |
| BccI | CCATC | 6 cut(s) | 82, 329, 592, 695, 794, 1130 |
| BcoDI | GTCTC | 4 cut(s) | 8, 194, 825, 1155 |
| BfaI | CTAG | 2 cut(s) | 1161, 1182 |
| BfmI | CTRYAG | 3 cut(s) | 396, 447, 678 |
| BfrI | CTTAAG | 1 cut(s) | 1063 |
| BisI | GCNGC | 5 cut(s) | 24, 75, 78, 224, 396 |
| BlpI | GCTNAGC | 1 cut(s) | 252 |
| BlsI | GCNGC | 5 cut(s) | 25, 76, 79, 225, 397 |
| BmcAI | AGTACT | 1 cut(s) | 306 |
| BmrI | ACTGGG | 1 cut(s) | 458 |
| BmsI | GCATC | 7 cut(s) | 168, 198, 382, 468, 760, 980, 1032 |
| BmuI | ACTGGG | 1 cut(s) | 458 |
| BpiI | GAAGAC | 3 cut(s) | 663, 704, 1124 |
| BpmI | CTGGAG | 2 cut(s) | 926, 978 |
| Bpu10I | CCTNAGC | 2 cut(s) | 19, 287 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 252 |
| BpuEI | CTTGAG | 1 cut(s) | 305 |
| BsaAI | YACGTR | 1 cut(s) | 83 |
| BsaI | GGTCTC | 1 cut(s) | 8 |
| BsaJI | CCNNGG | 2 cut(s) | 189, 878 |
| BsaWI | WCCGGW | 1 cut(s) | 537 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 859, 889 |
| Bse118I | RCCGGY | 1 cut(s) | 537 |
| Bse1I | ACTGG | 3 cut(s) | 464, 995, 1170 |
| Bse21I | CCTNAGG | 1 cut(s) | 414 |
| BseDI | CCNNGG | 2 cut(s) | 189, 878 |
| BseGI | GGATG | 3 cut(s) | 340, 459, 847 |
| BseMII | CTCAG | 7 cut(s) | 87, 266, 278, 405, 638, 848, 998 |
| BseNI | ACTGG | 3 cut(s) | 464, 995, 1170 |
| BseRI | GAGGAG | 2 cut(s) | 864, 1109 |
| BseXI | GCAGC | 2 cut(s) | 235, 382 |
| Bsh1236I | CGCG | 1 cut(s) | 109 |
| BshFI | GGCC | 1 cut(s) | 656 |
| BshTI | ACCGGT | 1 cut(s) | 537 |
| BsiHKAI | GWGCWC | 1 cut(s) | 321 |
| BsiSI | CCGG | 1 cut(s) | 538 |
| BsmAI | GTCTC | 4 cut(s) | 8, 194, 825, 1155 |
| BsnI | GGCC | 1 cut(s) | 656 |
| Bso31I | GGTCTC | 1 cut(s) | 8 |
| Bsp1286I | GDGCHC | 1 cut(s) | 321 |
| Bsp143I | GATC | 3 cut(s) | 479, 562, 630 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 252 |
| BspACI | CCGC | 3 cut(s) | 23, 74, 77 |
| BspANI | GGCC | 1 cut(s) | 656 |
| BspCNI | CTCAG | 7 cut(s) | 88, 265, 279, 406, 637, 847, 999 |
| BspFNI | CGCG | 1 cut(s) | 109 |
| BspHI | TCATGA | 1 cut(s) | 361 |
| BspMAI | CTGCAG | 1 cut(s) | 400 |
| BspPI | GGATC | 3 cut(s) | 487, 570, 625 |
| BspTI | CTTAAG | 1 cut(s) | 1063 |
| BspTNI | GGTCTC | 1 cut(s) | 8 |
| BsrFI | RCCGGY | 1 cut(s) | 537 |
| BsrI | ACTGG | 3 cut(s) | 464, 995, 1170 |
| BssAI | RCCGGY | 1 cut(s) | 537 |
| BssECI | CCNNGG | 2 cut(s) | 189, 878 |
| BssMI | GATC | 3 cut(s) | 479, 562, 630 |
| BssSI | CACGAG | 1 cut(s) | 431 |
| BssT1I | CCWWGG | 1 cut(s) | 189 |
| Bst2BI | CACGAG | 1 cut(s) | 431 |
| Bst4CI | ACNGT | 5 cut(s) | 136, 389, 510, 640, 1123 |
| Bst6I | CTCTTC | 4 cut(s) | 26, 585, 835, 1040 |
| BstAFI | CTTAAG | 1 cut(s) | 1063 |
| BstBAI | YACGTR | 1 cut(s) | 83 |
| BstF5I | GGATG | 3 cut(s) | 340, 459, 847 |
| BstFNI | CGCG | 1 cut(s) | 109 |
| BstHHI | GCGC | 1 cut(s) | 109 |
| BstKTI | GATC | 3 cut(s) | 482, 565, 633 |
| BstMAI | GTCTC | 4 cut(s) | 8, 194, 825, 1155 |
| BstMBI | GATC | 3 cut(s) | 479, 562, 630 |
| BstSFI | CTRYAG | 3 cut(s) | 396, 447, 678 |
| BstUI | CGCG | 1 cut(s) | 109 |
| BstV1I | GCAGC | 2 cut(s) | 235, 382 |
| BstV2I | GAAGAC | 3 cut(s) | 663, 704, 1124 |
| Bsu36I | CCTNAGG | 1 cut(s) | 414 |
| BsuRI | GGCC | 1 cut(s) | 656 |
| BtsCI | GGATG | 3 cut(s) | 340, 459, 847 |
| BtsIMutI | CAGTG | 4 cut(s) | 471, 489, 1004, 1177 |
| CaiI | CAGNNNCTG | 2 cut(s) | 404, 446 |
| CciI | TCATGA | 1 cut(s) | 361 |
| CfoI | GCGC | 1 cut(s) | 109 |
| Cfr10I | RCCGGY | 1 cut(s) | 537 |
| Csp6I | GTAC | 3 cut(s) | 305, 506, 1030 |
| CspAI | ACCGGT | 1 cut(s) | 537 |
| CviAII | CATG | 3 cut(s) | 362, 887, 1108 |
| CviQI | GTAC | 3 cut(s) | 305, 506, 1030 |
| DpnI | GATC | 3 cut(s) | 481, 564, 632 |
| DpnII | GATC | 3 cut(s) | 479, 562, 630 |
| EaeI | YGGCCR | 1 cut(s) | 654 |
| Eam1104I | CTCTTC | 4 cut(s) | 26, 585, 835, 1040 |
| EarI | CTCTTC | 4 cut(s) | 26, 585, 835, 1040 |
| Ecl136II | GAGCTC | 1 cut(s) | 319 |
| Eco130I | CCWWGG | 1 cut(s) | 189 |
| Eco24I | GRGCYC | 1 cut(s) | 321 |
| Eco31I | GGTCTC | 1 cut(s) | 8 |
| Eco53kI | GAGCTC | 1 cut(s) | 319 |
| Eco57I | CTGAAG | 3 cut(s) | 288, 633, 1175 |
| Eco72I | CACGTG | 1 cut(s) | 83 |
| Eco81I | CCTNAGG | 1 cut(s) | 414 |
| EcoICRI | GAGCTC | 1 cut(s) | 319 |
| EcoT14I | CCWWGG | 1 cut(s) | 189 |
| EcoT38I | GRGCYC | 1 cut(s) | 321 |
| ErhI | CCWWGG | 1 cut(s) | 189 |
| FaeI | CATG | 3 cut(s) | 365, 890, 1111 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 240, 272, 1046, 1078, 1148, 1180 |
| FatI | CATG | 3 cut(s) | 361, 886, 1107 |
| Fnu4HI | GCNGC | 5 cut(s) | 24, 75, 78, 224, 396 |
| FokI | GGATG | 3 cut(s) | 347, 446, 854 |
| FriOI | GRGCYC | 1 cut(s) | 321 |
| Fsp4HI | GCNGC | 5 cut(s) | 24, 75, 78, 224, 396 |
| FspBI | CTAG | 2 cut(s) | 1161, 1182 |
| GlaI | GCGC | 1 cut(s) | 108 |
| GluI | GCNGC | 5 cut(s) | 24, 75, 78, 224, 396 |
| GsuI | CTGGAG | 2 cut(s) | 926, 978 |
| HaeIII | GGCC | 1 cut(s) | 656 |
| HapII | CCGG | 1 cut(s) | 538 |
| HhaI | GCGC | 1 cut(s) | 109 |
| Hin1II | CATG | 3 cut(s) | 365, 890, 1111 |
| Hin6I | GCGC | 1 cut(s) | 107 |
| HinP1I | GCGC | 1 cut(s) | 107 |
| HinfI | GANTC | 7 cut(s) | 185, 358, 517, 779, 1082, 1148, 1175 |
| HpaII | CCGG | 1 cut(s) | 538 |
| Hpy166II | GTNNAC | 1 cut(s) | 1032 |
| Hpy188I | TCNGA | 6 cut(s) | 97, 342, 627, 837, 879, 1155 |
| Hpy188III | TCNNGA | 8 cut(s) | 311, 322, 362, 431, 716, 1039, 1073, 1182 |
| Hpy8I | GTNNAC | 1 cut(s) | 1032 |
| Hpy99I | CGWCG | 1 cut(s) | 67 |
| HpyAV | CCTTC | 8 cut(s) | 61, 97, 226, 608, 832, 925, 1048, 1070 |
| HpyCH4III | ACNGT | 5 cut(s) | 136, 389, 510, 640, 1123 |
| HpyCH4IV | ACGT | 3 cut(s) | 82, 158, 1034 |
| HpyCH4V | TGCA | 6 cut(s) | 211, 398, 426, 459, 971, 1023 |
| HpySE526I | ACGT | 3 cut(s) | 82, 158, 1034 |
| Hsp92II | CATG | 3 cut(s) | 365, 890, 1111 |
| HspAI | GCGC | 1 cut(s) | 107 |
| Kzo9I | GATC | 3 cut(s) | 479, 562, 630 |
| LpnPI | CCDG | 9 cut(s) | 24, 426, 477, 551, 589, 744, 890, 1008, 1183 |
| Lsp1109I | GCAGC | 2 cut(s) | 235, 382 |
| LweI | GCATC | 7 cut(s) | 168, 198, 382, 468, 760, 980, 1032 |
| MaeI | CTAG | 2 cut(s) | 1161, 1182 |
| MaeII | ACGT | 3 cut(s) | 82, 158, 1034 |
| MaeIII | GTNAC | 4 cut(s) | 130, 428, 569, 1139 |
| MalI | GATC | 3 cut(s) | 481, 564, 632 |
| MboI | GATC | 3 cut(s) | 479, 562, 630 |
| MhlI | GDGCHC | 1 cut(s) | 321 |
| MlsI | TGGCCA | 1 cut(s) | 656 |
| MluCI | AATT | 1 cut(s) | 735 |
| MluNI | TGGCCA | 1 cut(s) | 656 |
| MlyI | GAGTC | 3 cut(s) | 511, 773, 1157 |
| MmeI | TCCRAC | 2 cut(s) | 273, 359 |
| Mox20I | TGGCCA | 1 cut(s) | 656 |
| MroXI | GAANNNNTTC | 1 cut(s) | 150 |
| MscI | TGGCCA | 1 cut(s) | 656 |
| MseI | TTAA | 6 cut(s) | 171, 195, 351, 534, 795, 1064 |
| MslI | CAYNNNNRTG | 2 cut(s) | 464, 891 |
| Msp20I | TGGCCA | 1 cut(s) | 656 |
| MspCI | CTTAAG | 1 cut(s) | 1063 |
| MspI | CCGG | 1 cut(s) | 538 |
| MvnI | CGCG | 1 cut(s) | 109 |
| NdeII | GATC | 3 cut(s) | 479, 562, 630 |
| NlaIII | CATG | 3 cut(s) | 365, 890, 1111 |
| NmuCI | GTSAC | 3 cut(s) | 130, 428, 569 |
| PagI | TCATGA | 1 cut(s) | 361 |
| PdmI | GAANNNNTTC | 1 cut(s) | 150 |
| PfeI | GAWTC | 4 cut(s) | 185, 358, 1082, 1175 |
| PinAI | ACCGGT | 1 cut(s) | 537 |
| PkrI | GCNGC | 5 cut(s) | 25, 76, 79, 225, 397 |
| PleI | GAGTC | 3 cut(s) | 511, 773, 1156 |
| PmaCI | CACGTG | 1 cut(s) | 83 |
| PmlI | CACGTG | 1 cut(s) | 83 |
| PpsI | GAGTC | 3 cut(s) | 511, 773, 1156 |
| Ppu21I | YACGTR | 1 cut(s) | 83 |
| PsiI | TTATAA | 1 cut(s) | 549 |
| Psp124BI | GAGCTC | 1 cut(s) | 321 |
| PspCI | CACGTG | 1 cut(s) | 83 |
| PstI | CTGCAG | 1 cut(s) | 400 |
| PstNI | CAGNNNCTG | 2 cut(s) | 404, 446 |
| RsaI | GTAC | 3 cut(s) | 306, 507, 1031 |
| RsaNI | GTAC | 3 cut(s) | 305, 506, 1030 |
| RseI | CAYNNNNRTG | 2 cut(s) | 464, 891 |
| SacI | GAGCTC | 1 cut(s) | 321 |
| SaqAI | TTAA | 6 cut(s) | 171, 195, 351, 534, 795, 1064 |
| SatI | GCNGC | 5 cut(s) | 24, 75, 78, 224, 396 |
| Sau3AI | GATC | 3 cut(s) | 479, 562, 630 |
| ScaI | AGTACT | 1 cut(s) | 306 |
| SchI | GAGTC | 3 cut(s) | 511, 773, 1157 |
| SduI | GDGCHC | 1 cut(s) | 321 |
| SfaNI | GCATC | 7 cut(s) | 168, 198, 382, 468, 760, 980, 1032 |
| SfcI | CTRYAG | 3 cut(s) | 396, 447, 678 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 464, 891 |
| SmlI | CTYRAG | 2 cut(s) | 320, 1063 |
| SmoI | CTYRAG | 2 cut(s) | 320, 1063 |
| Sse9I | AATT | 1 cut(s) | 735 |
| SsiI | CCGC | 3 cut(s) | 23, 74, 77 |
| SspMI | CTAG | 2 cut(s) | 1161, 1182 |
| SstI | GAGCTC | 1 cut(s) | 321 |
| StyI | CCWWGG | 1 cut(s) | 189 |
| TaaI | ACNGT | 5 cut(s) | 136, 389, 510, 640, 1123 |
| TaiI | ACGT | 3 cut(s) | 85, 161, 1037 |
| TasI | AATT | 1 cut(s) | 735 |
| TatI | WGTACW | 2 cut(s) | 304, 1029 |
| TauI | GCSGC | 3 cut(s) | 26, 77, 80 |
| TfiI | GAWTC | 4 cut(s) | 185, 358, 1082, 1175 |
| Tru1I | TTAA | 6 cut(s) | 171, 195, 351, 534, 795, 1064 |
| Tru9I | TTAA | 6 cut(s) | 171, 195, 351, 534, 795, 1064 |
| TscAI | CASTG | 4 cut(s) | 471, 489, 1011, 1177 |
| TseFI | GTSAC | 3 cut(s) | 130, 428, 569 |
| TseI | GCWGC | 2 cut(s) | 223, 395 |
| Tsp45I | GTSAC | 3 cut(s) | 130, 428, 569 |
| TspDTI | ATGAA | 4 cut(s) | 143, 159, 903, 1124 |
| TspGWI | ACGGA | 1 cut(s) | 347 |
| TspRI | CASTG | 4 cut(s) | 471, 489, 1011, 1177 |
| Vha464I | CTTAAG | 1 cut(s) | 1063 |
| XbaI | TCTAGA | 1 cut(s) | 1181 |
| XmnI | GAANNNNTTC | 1 cut(s) | 150 |
| XspI | CTAG | 2 cut(s) | 1161, 1182 |
| ZrmI | AGTACT | 1 cut(s) | 306 |