Rorug06G0429300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0002918
Physical Location & Seq
Reverse (-)
56522712 .. 56525965
3254 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0429300.1

Sequence Viewer

Length: 1650 bp
ATGTCTCCGACTGCCGCAGCGGAAAATGGAAGTGTAAGAAGTAGTCATGAGGCTGCCGGCAGCATCTTTGACATCGGAGACTCCGAAATTCTCAAGTTGCTGGAGAGACCTAGAACAATAAATGTGGAGAGGAAGAGGTCCTTTGATGAAAGGTCATTCAGTGAAATGTCAAACATTGAACACCTCGAGTATATGTCCTCGTCAGTTTTGAACACTGCCACGCCTAGGTCATGCTATGACTCGCATTTCATGGTTTCCGATGCTTGGGAGACCTTGAGGCGCTCTGTTGTTCACTTTCGCGGCCAGCCTGTTGGGACTCTTGCTGCAGTCGACAGTTCCGTTGAACAACTTAACTATGATCAGGTATTTGTTAGAGACTTTGTCCCGAGTGCATTGGCCTTTTTGATGAATGGGGAAGAAGAAATAGTGAAGAACTTTCTTCTGAAAACGCTTCGCCTCCAATCATGGGAGAAAATAGTCGATGAGTTTAAGCTAGGAGCAGGGGTAATGCCAGCCAGTTTCAAAGTAGAGCACGACCAAGTAAGAAACAATGATACCATCACTGCAGATTTTGGCGAGAGTGCAATAGGAAGAGTTGCTCCGGTTGATTCAGGGTTTTGGTGGATCATATTGCTTCGTGCTTACACAAAGTCTACCGGGGACTCTTCACTCGCCGAACTGCCCGAATGCCAAAACGGTATTCGCCTCATTCTCAGCCTCTGTCTATCCGAAGGCTTCGACACTTTCCCAACTCTGTTATGTGCTGATGGATGTTGTATGATTGATCGTAGAATGGGCGTGTATGGGTACCCCATAGAAATACAAGCACTATTCTTCATGGCTCTGAGATGTGCTTGCTTCCTGCTCAAGCAAGACGATGTGGGTAAGGAATTTGTAGAGAGGATAACTGATCGTCTCCATGCTTTGAGCTTTCACATGCGGAGCTATTTCTGGCTGGACCTGAAGCAGCTCAATGATATATATCGCTATAAAACAGAGGAGTATTCTCACACAGCAGTGAACAAGTTCAATGTAATGCCCGATTCGCTTCCGGATTGGGTGTTCGATTTCATGCCGAGTCGTGGTGGCTACTTCATCGGAAATGTGAGCCCTGCGAGAATGGATTTCCGGTGGTTCTGTTTGGGTAATTGTGTGGCGATTCTGTCGTCTCTGGCAACCCCTGAGCAATCTGCAGCCATAATGGACCTTATTGAAGAACGTTGGGATGAGCTGGTTGGAGAAATGCCTATGAAAATTTGTTATCCTACCATTGAAAGCCATGAGTATCGAATTGTCACGGGCTGTGACCCCAAGAACACTAAGTGGAGTTACCACAATGGGGGCTCTTGGCCAGTGCTTCTATGGCTGTTGACAGCGGCATGTATAAAGACGGGACGTCCCCAAATTGCCAGGCGTGCGATTGATCTGACTGAAAGCCGGTTGTCGAGAGACCACTGGCCGGAGTACTATGATGGCAAGTCGGGGAGGTACATTGGAAAGCAGGCACGTAAGTTCCAAACATGGTCCATTGCAGGCTACTTGGTGGCGAAGATGATGTTGGATGACCCTTCTCATTTGGGGATGATATCACTAGAGGAAGATAAGCAAATGAAGCCCCTTATAAAAAGATCTGCTTCATGGACATCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

549

Amino Acids

62.57

Weight (kDa)

5.59

Isoelectric Point (pI)

57.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_100 PF12899 88 - 523 3.3e-220 Alkaline and neutral invertase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1622
AatII GACGTC 1 cut(s) 1399
Acc65I GGTACC 1 cut(s) 807
AccB1I GGYRCC 1 cut(s) 807
AccI GTMKAC 2 cut(s) 330, 653
AccII CGCG 1 cut(s) 300
AccIII TCCGGA 1 cut(s) 1051
AciI CCGC 5 cut(s) 15, 20, 300, 940, 1376
AclI AACGTT 1 cut(s) 1219
AclWI GGATC 1 cut(s) 632
AcoI YGGCCR 3 cut(s) 301, 1349, 1457
AcsI RAATTY 3 cut(s) 87, 890, 1254
AcuI CTGAAG 1 cut(s) 983
AcyI GRCGYC 1 cut(s) 1396
AdeI CACNNNGTG 1 cut(s) 1323
AfaI GTAC 3 cut(s) 809, 1466, 1490
AfiI CCNNNNNNNGG 6 cut(s) 225, 264, 466, 1082, 1339, 1459
AgsI TTSAA 7 cut(s) 179, 211, 344, 523, 1030, 1214, 1274
AhdI GACNNNNNGTC 1 cut(s) 1395
AjnI CCWGG 1 cut(s) 1409
AjuI GAANNNNNNNTTGG 4 cut(s) 684, 716, 1541, 1573
AleI CACNNNNGTG 1 cut(s) 1016
AloI GAACNNNNNNTCC 2 cut(s) 1046, 1078
AluBI AGCT 5 cut(s) 493, 930, 945, 970, 1231
AluI AGCT 5 cut(s) 493, 930, 945, 970, 1231
Alw21I GWGCWC 1 cut(s) 534
Alw26I GTCTC 8 cut(s) 9, 72, 100, 263, 369, 920, 1173, 1443
AlwI GGATC 1 cut(s) 632
AlwNI CAGNNNCTG 1 cut(s) 720
Ama87I CYCGRG 2 cut(s) 185, 385
Aor13HI TCCGGA 1 cut(s) 1051
AoxI GGCC 4 cut(s) 301, 396, 1349, 1457
ApeKI GCWGC 6 cut(s) 17, 53, 60, 323, 967, 1193
ApoI RAATTY 3 cut(s) 87, 890, 1254
Asp700I GAANNNNTTC 1 cut(s) 1025
Asp718I GGTACC 1 cut(s) 807
AspA2I CCTAGG 1 cut(s) 224
AspLEI GCGC 1 cut(s) 282
AspS9I GGNCC 4 cut(s) 138, 958, 1204, 1524
AsuC2I CCSGG 1 cut(s) 658
AvaI CYCGRG 2 cut(s) 185, 385
AvaII GGWCC 4 cut(s) 138, 958, 1204, 1524
AvrII CCTAGG 1 cut(s) 224
BalI TGGCCA 1 cut(s) 1351
BanI GGYRCC 1 cut(s) 807
BanII GRGCYC 2 cut(s) 1112, 1346
Bbv12I GWGCWC 1 cut(s) 534
BbvI GCAGC 6 cut(s) 29, 40, 72, 310, 979, 1205
BccI CCATC 3 cut(s) 566, 761, 1466
BciT130I CCWGG 1 cut(s) 1411
BclI TGATCA 1 cut(s) 358
BcnI CCSGG 1 cut(s) 658
BcoDI GTCTC 8 cut(s) 9, 72, 100, 263, 369, 920, 1173, 1443
BfaI CTAG 4 cut(s) 111, 225, 494, 1592
BfmI CTRYAG 3 cut(s) 324, 564, 1191
BfoI RGCGCY 1 cut(s) 283
BglII AGATCT 1 cut(s) 1628
BisI GCNGC 9 cut(s) 15, 18, 54, 61, 301, 324, 968, 1194, 1377
BlnI CCTAGG 1 cut(s) 224
BlsI GCNGC 9 cut(s) 16, 19, 55, 62, 302, 325, 969, 1195, 1378
BmcAI AGTACT 1 cut(s) 1466
Bme1390I CCNGG 2 cut(s) 658, 1411
Bme18I GGWCC 4 cut(s) 138, 958, 1204, 1524
BmeRI GACNNNNNGTC 1 cut(s) 1395
BmeT110I CYCGRG 2 cut(s) 185, 385
BmgT120I GGNCC 4 cut(s) 138, 958, 1204, 1524
BmiI GGNNCC 1 cut(s) 809
BmrFI CCNGG 2 cut(s) 658, 1411
BmsI GCATC 2 cut(s) 72, 250
BpmI CTGGAG 1 cut(s) 122
Bpu10I CCTNAGC 1 cut(s) 1182
BpuEI CTTGAG 3 cut(s) 77, 295, 851
BpuMI CCSGG 1 cut(s) 658
BsaAI YACGTR 1 cut(s) 1508
BsaBI GATNNNNATC 1 cut(s) 981
BsaHI GRCGYC 1 cut(s) 1396
BsaI GGTCTC 3 cut(s) 100, 263, 1443
BsaJI CCNNGG 2 cut(s) 224, 657
BsaWI WCCGGW 3 cut(s) 601, 1051, 1128
BsaXI ACNNNNNCTCC 2 cut(s) 489, 519
Bsc4I CCNNNNNNNGG 6 cut(s) 225, 264, 466, 1082, 1339, 1459
Bse118I RCCGGY 2 cut(s) 56, 1437
Bse1I ACTGG 3 cut(s) 516, 1352, 1460
Bse3DI GCAATG 1 cut(s) 1527
Bse8I GATNNNNATC 1 cut(s) 981
BseAI TCCGGA 1 cut(s) 1051
BseBI CCWGG 1 cut(s) 1411
BseDI CCNNGG 2 cut(s) 224, 657
BseGI GGATG 4 cut(s) 776, 1231, 1567, 1587
BseJI GATNNNNATC 1 cut(s) 981
BseLI CCNNNNNNNGG 6 cut(s) 225, 264, 466, 1082, 1339, 1459
BseMI GCAATG 1 cut(s) 1527
BseMII CTCAG 3 cut(s) 727, 836, 1173
BseNI ACTGG 3 cut(s) 516, 1352, 1460
BseRI GAGGAG 1 cut(s) 1013
BseXI GCAGC 6 cut(s) 29, 40, 72, 310, 979, 1205
Bsh1236I CGCG 1 cut(s) 300
BshFI GGCC 4 cut(s) 303, 398, 1351, 1459
BshNI GGYRCC 1 cut(s) 807
BsiHKAI GWGCWC 1 cut(s) 534
BsiHKCI CYCGRG 2 cut(s) 185, 385
BsiSI CCGG 7 cut(s) 57, 602, 657, 1052, 1129, 1438, 1460
BslFI GGGAC 5 cut(s) 328, 368, 674, 1383, 1407
BslI CCNNNNNNNGG 6 cut(s) 225, 264, 466, 1082, 1339, 1459
BsmAI GTCTC 8 cut(s) 9, 72, 100, 263, 369, 920, 1173, 1443
BsmBI CGTCTC 2 cut(s) 920, 1173
BsmFI GGGAC 5 cut(s) 328, 368, 674, 1383, 1407
BsmI GAATGC 1 cut(s) 692
BsnI GGCC 4 cut(s) 303, 398, 1351, 1459
Bso31I GGTCTC 3 cut(s) 100, 263, 1443
BsoBI CYCGRG 2 cut(s) 185, 385
Bsp1286I GDGCHC 3 cut(s) 534, 1112, 1346
Bsp13I TCCGGA 1 cut(s) 1051
Bsp143I GATC 6 cut(s) 358, 624, 784, 910, 1423, 1628
BspACI CCGC 5 cut(s) 15, 20, 300, 940, 1376
BspANI GGCC 4 cut(s) 303, 398, 1351, 1459
BspCNI CTCAG 3 cut(s) 726, 837, 1174
BspEI TCCGGA 1 cut(s) 1051
BspFNI CGCG 1 cut(s) 300
BspHI TCATGA 1 cut(s) 46
BspLI GGNNCC 1 cut(s) 809
BspMAI CTGCAG 3 cut(s) 328, 568, 1195
BspPI GGATC 1 cut(s) 632
BspT107I GGYRCC 1 cut(s) 807
BspTNI GGTCTC 3 cut(s) 100, 263, 1443
BsrDI GCAATG 1 cut(s) 1527
BsrFI RCCGGY 2 cut(s) 56, 1437
BsrI ACTGG 3 cut(s) 516, 1352, 1460
BssAI RCCGGY 2 cut(s) 56, 1437
BssECI CCNNGG 2 cut(s) 224, 657
BssMI GATC 6 cut(s) 358, 624, 784, 910, 1423, 1628
BssNI GRCGYC 1 cut(s) 1396
BssT1I CCWWGG 1 cut(s) 224
Bst2UI CCWGG 1 cut(s) 1411
Bst4CI ACNGT 2 cut(s) 335, 698
Bst6I CTCTTC 3 cut(s) 128, 586, 670
BstACI GRCGYC 1 cut(s) 1396
BstBAI YACGTR 1 cut(s) 1508
BstC8I GCNNGC 7 cut(s) 58, 305, 513, 856, 1416, 1503, 1534
BstDEI CTNAG 5 cut(s) 713, 845, 1182, 1320, 1647
BstF5I GGATG 4 cut(s) 776, 1231, 1567, 1587
BstFNI CGCG 1 cut(s) 300
BstH2I RGCGCY 1 cut(s) 283
BstHHI GCGC 1 cut(s) 282
BstKTI GATC 6 cut(s) 361, 627, 787, 913, 1426, 1631
BstMAI GTCTC 8 cut(s) 9, 72, 100, 263, 369, 920, 1173, 1443
BstMBI GATC 6 cut(s) 358, 624, 784, 910, 1423, 1628
BstMWI GCNNNNNNNGC 4 cut(s) 1045, 1363, 1415, 1612
BstNI CCWGG 1 cut(s) 1411
BstNSI RCATGY 2 cut(s) 940, 1383
BstSCI CCNGG 2 cut(s) 656, 1409
BstSFI CTRYAG 3 cut(s) 324, 564, 1191
BstUI CGCG 1 cut(s) 300
BstV1I GCAGC 6 cut(s) 29, 40, 72, 310, 979, 1205
BstX2I RGATCY 1 cut(s) 1628
BstXI CCANNNNNNTGG 1 cut(s) 311
BstYI RGATCY 1 cut(s) 1628
BsuRI GGCC 4 cut(s) 303, 398, 1351, 1459
BtsCI GGATG 4 cut(s) 776, 1231, 1567, 1587
BtsI GCAGTG 3 cut(s) 213, 561, 1023
BtsIMutI CAGTG 6 cut(s) 166, 213, 561, 1023, 1359, 1453
Cac8I GCNNGC 7 cut(s) 58, 305, 513, 856, 1416, 1503, 1534
CaiI CAGNNNCTG 1 cut(s) 720
CciI TCATGA 1 cut(s) 46
CfoI GCGC 1 cut(s) 282
Cfr10I RCCGGY 2 cut(s) 56, 1437
Cfr13I GGNCC 4 cut(s) 138, 958, 1204, 1524
Csp6I GTAC 3 cut(s) 808, 1465, 1489
CspCI CAANNNNNGTGG 2 cut(s) 105, 140
CviQI GTAC 3 cut(s) 808, 1465, 1489
DdeI CTNAG 5 cut(s) 713, 845, 1182, 1320, 1647
DpnI GATC 6 cut(s) 360, 626, 786, 912, 1425, 1630
DpnII GATC 6 cut(s) 358, 624, 784, 910, 1423, 1628
DraIII CACNNNGTG 1 cut(s) 1323
DriI GACNNNNNGTC 1 cut(s) 1395
EaeI YGGCCR 3 cut(s) 301, 1349, 1457
Eam1104I CTCTTC 3 cut(s) 128, 586, 670
Eam1105I GACNNNNNGTC 1 cut(s) 1395
EarI CTCTTC 3 cut(s) 128, 586, 670
Eco130I CCWWGG 1 cut(s) 224
Eco24I GRGCYC 2 cut(s) 1112, 1346
Eco31I GGTCTC 3 cut(s) 100, 263, 1443
Eco32I GATATC 1 cut(s) 1587
Eco47I GGWCC 4 cut(s) 138, 958, 1204, 1524
Eco57I CTGAAG 1 cut(s) 983
Eco88I CYCGRG 2 cut(s) 185, 385
EcoO109I RGGNCCY 1 cut(s) 138
EcoRII CCWGG 1 cut(s) 1409
EcoRV GATATC 1 cut(s) 1587
EcoT14I CCWWGG 1 cut(s) 224
EcoT38I GRGCYC 2 cut(s) 1112, 1346
ErhI CCWWGG 1 cut(s) 224
Esp3I CGTCTC 2 cut(s) 920, 1173
FalI AAGNNNNNCTT 4 cut(s) 125, 157, 1618, 1650
FaqI GGGAC 5 cut(s) 328, 368, 674, 1383, 1407
FbaI TGATCA 1 cut(s) 358
FblI GTMKAC 2 cut(s) 330, 653
Fnu4HI GCNGC 9 cut(s) 15, 18, 54, 61, 301, 324, 968, 1194, 1377
FokI GGATG 4 cut(s) 783, 1238, 1574, 1594
FriOI GRGCYC 2 cut(s) 1112, 1346
Fsp4HI GCNGC 9 cut(s) 15, 18, 54, 61, 301, 324, 968, 1194, 1377
FspBI CTAG 4 cut(s) 111, 225, 494, 1592
GlaI GCGC 1 cut(s) 281
GluI GCNGC 9 cut(s) 15, 18, 54, 61, 301, 324, 968, 1194, 1377
GsuI CTGGAG 1 cut(s) 122
HaeII RGCGCY 1 cut(s) 283
HaeIII GGCC 4 cut(s) 303, 398, 1351, 1459
HapII CCGG 7 cut(s) 57, 602, 657, 1052, 1129, 1438, 1460
HhaI GCGC 1 cut(s) 282
Hin1I GRCGYC 1 cut(s) 1396
Hin6I GCGC 1 cut(s) 280
HinP1I GCGC 1 cut(s) 280
HincII GTYRAC 2 cut(s) 331, 1371
HindII GTYRAC 2 cut(s) 331, 1371
HinfI GANTC 8 cut(s) 80, 239, 316, 608, 662, 1043, 1078, 1159
HpaII CCGG 7 cut(s) 57, 602, 657, 1052, 1129, 1438, 1460
Hpy166II GTNNAC 5 cut(s) 292, 331, 654, 1021, 1371
Hpy188I TCNGA 9 cut(s) 9, 77, 85, 259, 444, 730, 846, 1100, 1428
Hpy188III TCNNGA 4 cut(s) 47, 385, 1052, 1446
Hpy8I GTNNAC 5 cut(s) 292, 331, 654, 1021, 1371
HpyAV CCTTC 2 cut(s) 725, 1578
HpyCH4III ACNGT 2 cut(s) 335, 698
HpyCH4IV ACGT 3 cut(s) 1219, 1396, 1507
HpyCH4V TGCA 6 cut(s) 326, 392, 566, 584, 1193, 1532
HpyF10VI GCNNNNNNNGC 4 cut(s) 1045, 1363, 1415, 1612
HpyF3I CTNAG 5 cut(s) 713, 845, 1182, 1320, 1647
HpySE526I ACGT 3 cut(s) 1219, 1396, 1507
Hsp92I GRCGYC 1 cut(s) 1396
HspAI GCGC 1 cut(s) 280
Kpn2I TCCGGA 1 cut(s) 1051
KpnI GGTACC 1 cut(s) 811
KroI GCCGGC 1 cut(s) 56
KroNI GCCGGC 1 cut(s) 58
Ksp22I TGATCA 1 cut(s) 358
Kzo9I GATC 6 cut(s) 358, 624, 784, 910, 1423, 1628
LmnI GCTCC 3 cut(s) 497, 604, 942
Lsp1109I GCAGC 6 cut(s) 29, 40, 72, 310, 979, 1205
LweI GCATC 2 cut(s) 72, 250
MaeI CTAG 4 cut(s) 111, 225, 494, 1592
MaeII ACGT 3 cut(s) 1219, 1396, 1507
MaeIII GTNAC 3 cut(s) 1294, 1304, 1328
MalI GATC 6 cut(s) 360, 626, 786, 912, 1425, 1630
MboI GATC 6 cut(s) 358, 624, 784, 910, 1423, 1628
MflI RGATCY 1 cut(s) 1628
MhlI GDGCHC 3 cut(s) 534, 1112, 1346
MlsI TGGCCA 1 cut(s) 1351
MluCI AATT 6 cut(s) 87, 890, 1147, 1254, 1290, 1404
MluNI TGGCCA 1 cut(s) 1351
MlyI GAGTC 5 cut(s) 74, 233, 310, 656, 1087
MmeI TCCRAC 3 cut(s) 32, 1216, 1539
Mox20I TGGCCA 1 cut(s) 1351
MroI TCCGGA 1 cut(s) 1051
MroNI GCCGGC 1 cut(s) 56
MroXI GAANNNNTTC 1 cut(s) 1025
MscI TGGCCA 1 cut(s) 1351
MseI TTAA 2 cut(s) 351, 489
MslI CAYNNNNRTG 1 cut(s) 1016
Msp20I TGGCCA 1 cut(s) 1351
MspA1I CMGCKG 2 cut(s) 20, 1376
MspI CCGG 7 cut(s) 57, 602, 657, 1052, 1129, 1438, 1460
MspR9I CCNGG 2 cut(s) 658, 1411
Mva1269I GAATGC 1 cut(s) 692
MvaI CCWGG 1 cut(s) 1411
MvnI CGCG 1 cut(s) 300
MwoI GCNNNNNNNGC 4 cut(s) 1045, 1363, 1415, 1612
NaeI GCCGGC 1 cut(s) 58
NciI CCSGG 1 cut(s) 658
NdeII GATC 6 cut(s) 358, 624, 784, 910, 1423, 1628
NgoMIV GCCGGC 1 cut(s) 56
NlaIV GGNNCC 1 cut(s) 809
NmeAIII GCCGAG 1 cut(s) 1101
NmuCI GTSAC 2 cut(s) 1294, 1304
NspI RCATGY 2 cut(s) 940, 1383
OliI CACNNNNGTG 1 cut(s) 1016
PaeR7I CTCGAG 1 cut(s) 185
PagI TCATGA 1 cut(s) 46
PcsI WCGNNNNNNNCGW 2 cut(s) 81, 336
PctI GAATGC 1 cut(s) 692
PdiI GCCGGC 1 cut(s) 58
PdmI GAANNNNTTC 1 cut(s) 1025
PfeI GAWTC 3 cut(s) 608, 1043, 1159
PflFI GACNNNGTC 1 cut(s) 380
PkrI GCNGC 9 cut(s) 16, 19, 55, 62, 302, 325, 969, 1195, 1378
PleI GAGTC 5 cut(s) 74, 233, 310, 656, 1086
PpsI GAGTC 5 cut(s) 74, 233, 310, 656, 1086
Ppu21I YACGTR 1 cut(s) 1508
PpuMI RGGWCCY 1 cut(s) 138
PsiI TTATAA 1 cut(s) 1622
Psp1406I AACGTT 1 cut(s) 1219
Psp5II RGGWCCY 1 cut(s) 138
Psp6I CCWGG 1 cut(s) 1409
PspGI CCWGG 1 cut(s) 1409
PspN4I GGNNCC 1 cut(s) 809
PspPI GGNCC 4 cut(s) 138, 958, 1204, 1524
PspPPI RGGWCCY 1 cut(s) 138
PspXI VCTCGAGB 1 cut(s) 185
PstI CTGCAG 3 cut(s) 328, 568, 1195
PstNI CAGNNNCTG 1 cut(s) 720
PsuI RGATCY 1 cut(s) 1628
PsyI GACNNNGTC 1 cut(s) 380
RsaI GTAC 3 cut(s) 809, 1466, 1490
RsaNI GTAC 3 cut(s) 808, 1465, 1489
RseI CAYNNNNRTG 1 cut(s) 1016
SalI GTCGAC 1 cut(s) 329
SaqAI TTAA 2 cut(s) 351, 489
SatI GCNGC 9 cut(s) 15, 18, 54, 61, 301, 324, 968, 1194, 1377
Sau3AI GATC 6 cut(s) 358, 624, 784, 910, 1423, 1628
Sau96I GGNCC 4 cut(s) 138, 958, 1204, 1524
ScaI AGTACT 1 cut(s) 1466
SchI GAGTC 5 cut(s) 74, 233, 310, 656, 1087
ScrFI CCNGG 2 cut(s) 658, 1411
SduI GDGCHC 3 cut(s) 534, 1112, 1346
SfaNI GCATC 2 cut(s) 72, 250
SfcI CTRYAG 3 cut(s) 324, 564, 1191
Sfr274I CTCGAG 1 cut(s) 185
SinI GGWCC 4 cut(s) 138, 958, 1204, 1524
SlaI CTCGAG 1 cut(s) 185
SmiMI CAYNNNNRTG 1 cut(s) 1016
SmlI CTYRAG 4 cut(s) 92, 185, 274, 866
SmoI CTYRAG 4 cut(s) 92, 185, 274, 866
Sse9I AATT 6 cut(s) 87, 890, 1147, 1254, 1290, 1404
SsiI CCGC 5 cut(s) 15, 20, 300, 940, 1376
SspMI CTAG 4 cut(s) 111, 225, 494, 1592
StyD4I CCNGG 2 cut(s) 656, 1409
StyI CCWWGG 1 cut(s) 224
TaaI ACNGT 2 cut(s) 335, 698
TaiI ACGT 3 cut(s) 1222, 1399, 1510
TaqI TCGA 7 cut(s) 186, 330, 480, 738, 1065, 1288, 1445
TasI AATT 6 cut(s) 87, 890, 1147, 1254, 1290, 1404
TatI WGTACW 1 cut(s) 1464
TauI GCSGC 3 cut(s) 17, 303, 1379
TfiI GAWTC 3 cut(s) 608, 1043, 1159
Tru1I TTAA 2 cut(s) 351, 489
Tru9I TTAA 2 cut(s) 351, 489
TscAI CASTG 6 cut(s) 166, 220, 568, 1023, 1359, 1460
TseFI GTSAC 2 cut(s) 1294, 1304
TseI GCWGC 6 cut(s) 17, 53, 60, 323, 967, 1193
Tsp45I GTSAC 2 cut(s) 1294, 1304
TspDTI ATGAA 9 cut(s) 162, 238, 422, 826, 1060, 1084, 1265, 1625, 1626
TspGWI ACGGA 1 cut(s) 328
TspRI CASTG 6 cut(s) 166, 220, 568, 1023, 1359, 1460
Tth111I GACNNNGTC 1 cut(s) 380
VpaK11BI GGWCC 4 cut(s) 138, 958, 1204, 1524
XapI RAATTY 3 cut(s) 87, 890, 1254
XceI RCATGY 2 cut(s) 940, 1383
XcmI CCANNNNNNNNNTGG 1 cut(s) 1359
XhoI CTCGAG 1 cut(s) 185
XmaJI CCTAGG 1 cut(s) 224
XmiI GTMKAC 2 cut(s) 330, 653
XmnI GAANNNNTTC 1 cut(s) 1025
XspI CTAG 4 cut(s) 111, 225, 494, 1592
ZraI GACGTC 1 cut(s) 1397
ZrmI AGTACT 1 cut(s) 1466
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.