Prupe.5G181800_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
15196004 .. 15199549
3546 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G181800.1

Sequence Viewer

Length: 1557 bp
ATGGAGGAGTCTGAACTTAAATTGACGGCTTTGAAGAAGGCCTACGCCGAAATAATCCTCAACACGGCGAAAGAGGCGGCGGCACGTATTGTAGTGTCGGAGAGAAAAGCTCTGCTGTTTCAAAGGGAGCTCTTTTCGACTAAAGAAGAGGCATTTCGGATGCTTCTTAGGCTCAAACAAATGTTGGATTCCAAGGCTAGTGAAGCAAAGATGATGTCCTCGAGTCAACAAAAAAAGATTGACGAACTTGAAGCACAGCTCCAGGAAGCTGAGGATATAGTGAAAGACCTTAGGGAAGAGTTGAGCGAAGCGCAGACTCAACTGGAGAAGGCGACAAAGAATCAACCACAGCCTCTGGCAAGGGAAAGTTTAGACAGTGATACTGCTGCTCCAGGGTTAATGATATCTCAACTGAGTTCGCATATAGATGCAGTTGCAACTTATGAAAAGAATTCAATTTTGAATGGGACATATGAGGGGAGCAGGTGCTACAGTACAAATGATGCTCTTAAGGATCGGTACTGTGTTCCTAATCCCGATTTTGCCTCTTTAGTAATGAGAAGTAAAGAGCCTGAGTTATACAGAAATGGATGCACTCAGAGAATTCGTGCATTTGAAAGAAACCTATTGGATGAAAATTTGTCTCTTTCTGGACTAGTTGATGATGCAAAGAATGCAACATTCATCAGAGGAGATGATGAAGGTAAAGGGATGTGTAACACGCCTAAACCAAAGGTTGGCAATACGCATGGGGTAGAGAAGAACCAAGAACAACTGAAAGTGATGCAGCTAGATGGTAGCCATATTCAAGCACCTGCCTTTAAGTCCTTTCAAAATAAGAGGAAAAGAGCTGCTAGATATAGGAGGAGCAAAGCTCCCTCATGCAGGTATCTTCCTCATCAGTTCAAGGAAATGCACCAAGATCTATCCTGCACCATTACTTCTGCTTCTTCAGTCAATAACAATGTTCTCACAGATAATGCTTCCAAGAAATCTGAAGATGAAATTCGAAAAGTCACAGAATCCGTTTTGACCCCAAAATTACTCTCAGATACAACTGAAATGAGCACACGGTCAGGATGTTCTAACGTAACTGACAATGATGCAGGGTTTGTTAGACCTTGTAGTGTTCAGAAGGCAATGGACAATGATAAGATGATCATTGAAGAATCAGAATTGACCAGACAGGAAAGTTTATCTGCAGAAAAATTGGAGATTCTGGCTTGCAAAACAGATGTTGAGAAAGATAATAGACCATTAAATAAGTCGGATATGAGAGCATCTGATTTAGATGGTGGCACTGCTAGTCAACCTGCAGACAATAAGTTTCTTAAATATACATTCTGCAGAAAGCGCAAGAAGGAGACATTGAGCAGCCCTGAAAGGTTGTCCCTTCTTGACAATGACACTTTGGAAAGAAAGACAGGGGAGGAACAAAATGTTTCTCTCGAGCCACAGAAGTCAAGCTTATTGACTGAATCATCTCGGGAAAGTCGACGACTAGCACAGGTTGCTCGTCAGCTTATATCTTTGTCAGAGAAGAAGTGGTGGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

519

Amino Acids

58.45

Weight (kDa)

7.9

Isoelectric Point (pI)

48.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 474, 823
Acc36I ACCTGC 4 cut(s) 474, 823, 876, 1321
AccB7I CCANNNNNTGG 1 cut(s) 737
AccI GTMKAC 1 cut(s) 1495
AciI CCGC 2 cut(s) 77, 80
AclWI GGATC 1 cut(s) 522
AcsI RAATTY 4 cut(s) 451, 603, 637, 1005
AcuI CTGAAG 2 cut(s) 936, 1017
AfaI GTAC 2 cut(s) 496, 521
AfiI CCNNNNNNNGG 3 cut(s) 64, 737, 885
AflII CTTAAG 1 cut(s) 509
AhlI ACTAGT 1 cut(s) 655
AjnI CCWGG 2 cut(s) 261, 391
AluBI AGCT 9 cut(s) 110, 130, 259, 269, 790, 851, 875, 1467, 1522
AluI AGCT 9 cut(s) 110, 130, 259, 269, 790, 851, 875, 1467, 1522
Alw21I GWGCWC 2 cut(s) 132, 1070
Alw26I GTCTC 2 cut(s) 648, 1358
AlwI GGATC 1 cut(s) 522
AlwNI CAGNNNCTG 1 cut(s) 355
Ama87I CYCGRG 3 cut(s) 220, 1448, 1485
AoxI GGCC 1 cut(s) 39
ApeKI GCWGC 4 cut(s) 386, 787, 851, 1374
ApoI RAATTY 4 cut(s) 451, 603, 637, 1005
ArsI GACNNNNNNTTYG 2 cut(s) 200, 232
AspLEI GCGC 2 cut(s) 313, 1356
AsuII TTCGAA 1 cut(s) 1009
AvaI CYCGRG 3 cut(s) 220, 1448, 1485
AxyI CCTNAGG 1 cut(s) 290
BanII GRGCYC 1 cut(s) 132
BarI GAAGNNNNNNTAC 2 cut(s) 26, 58
Bbv12I GWGCWC 2 cut(s) 132, 1070
BbvCI CCTCAGC 1 cut(s) 270
BbvI GCAGC 4 cut(s) 373, 799, 838, 1386
BccI CCATC 2 cut(s) 788, 1286
BceAI ACGGC 2 cut(s) 42, 81
BciT130I CCWGG 2 cut(s) 263, 393
BclI TGATCA 1 cut(s) 1158
BcoDI GTCTC 2 cut(s) 648, 1358
BcuI ACTAGT 1 cut(s) 655
BfaI CTAG 6 cut(s) 198, 656, 791, 855, 1305, 1502
BfmI CTRYAG 4 cut(s) 490, 1200, 1314, 1345
BfrI CTTAAG 1 cut(s) 509
BfuAI ACCTGC 4 cut(s) 474, 823, 876, 1321
BglII AGATCT 1 cut(s) 922
BisI GCNGC 6 cut(s) 78, 81, 387, 788, 852, 1375
BlsI GCNGC 6 cut(s) 79, 82, 388, 789, 853, 1376
Bme1390I CCNGG 2 cut(s) 263, 393
BmeT110I CYCGRG 3 cut(s) 220, 1448, 1485
BmrFI CCNGG 2 cut(s) 263, 393
BmsI GCATC 8 cut(s) 150, 418, 493, 581, 655, 774, 1093, 1289
BplI GAGNNNNNCTC 4 cut(s) 94, 126, 859, 891
BpmI CTGGAG 3 cut(s) 245, 344, 375
Bpu10I CCTNAGC 1 cut(s) 270
Bpu14I TTCGAA 1 cut(s) 1009
BsaAI YACGTR 1 cut(s) 86
BsaJI CCNNGG 2 cut(s) 192, 392
BsaXI ACNNNNNCTCC 2 cut(s) 373, 403
Bsc4I CCNNNNNNNGG 3 cut(s) 64, 737, 885
Bse1I ACTGG 1 cut(s) 327
Bse21I CCTNAGG 1 cut(s) 290
Bse3DI GCAATG 1 cut(s) 1146
BseBI CCWGG 2 cut(s) 263, 393
BseDI CCNNGG 2 cut(s) 192, 392
BseGI GGATG 5 cut(s) 165, 596, 637, 717, 1085
BseLI CCNNNNNNNGG 3 cut(s) 64, 737, 885
BseMI GCAATG 1 cut(s) 1146
BseMII CTCAG 5 cut(s) 261, 404, 564, 611, 1062
BseNI ACTGG 1 cut(s) 327
BseRI GAGGAG 3 cut(s) 20, 705, 880
BseXI GCAGC 4 cut(s) 373, 799, 838, 1386
BsgI GTGCAG 1 cut(s) 916
BshFI GGCC 1 cut(s) 41
BsiHKAI GWGCWC 2 cut(s) 132, 1070
BsiHKCI CYCGRG 3 cut(s) 220, 1448, 1485
BslFI GGGAC 2 cut(s) 481, 1375
BslI CCNNNNNNNGG 3 cut(s) 64, 737, 885
BsmAI GTCTC 2 cut(s) 648, 1358
BsmFI GGGAC 2 cut(s) 481, 1375
BsmI GAATGC 1 cut(s) 679
BsnI GGCC 1 cut(s) 41
BsoBI CYCGRG 3 cut(s) 220, 1448, 1485
Bsp119I TTCGAA 1 cut(s) 1009
Bsp1286I GDGCHC 2 cut(s) 132, 1070
Bsp143I GATC 3 cut(s) 514, 922, 1158
BspACI CCGC 2 cut(s) 77, 80
BspANI GGCC 1 cut(s) 41
BspCNI CTCAG 5 cut(s) 262, 405, 565, 610, 1061
BspMAI CTGCAG 3 cut(s) 1204, 1318, 1349
BspMI ACCTGC 4 cut(s) 474, 823, 876, 1321
BspPI GGATC 1 cut(s) 522
BspT104I TTCGAA 1 cut(s) 1009
BspTI CTTAAG 1 cut(s) 509
BsrDI GCAATG 1 cut(s) 1146
BsrI ACTGG 1 cut(s) 327
BssECI CCNNGG 2 cut(s) 192, 392
BssMI GATC 3 cut(s) 514, 922, 1158
BssT1I CCWWGG 1 cut(s) 192
Bst2UI CCWGG 2 cut(s) 263, 393
Bst4CI ACNGT 4 cut(s) 377, 494, 524, 1074
Bst6I CTCTTC 2 cut(s) 141, 291
BstAFI CTTAAG 1 cut(s) 509
BstAPI GCANNNNNTGC 2 cut(s) 674, 1511
BstBAI YACGTR 1 cut(s) 86
BstBI TTCGAA 1 cut(s) 1009
BstC8I GCNNGC 1 cut(s) 1225
BstDEI CTNAG 7 cut(s) 167, 270, 290, 413, 573, 597, 1048
BstENI CCTNNNNNAGG 1 cut(s) 883
BstF5I GGATG 5 cut(s) 165, 596, 637, 717, 1085
BstHHI GCGC 2 cut(s) 313, 1356
BstKTI GATC 3 cut(s) 517, 925, 1161
BstMAI GTCTC 2 cut(s) 648, 1358
BstMBI GATC 3 cut(s) 514, 922, 1158
BstMWI GCNNNNNNNGC 6 cut(s) 74, 169, 203, 674, 1353, 1511
BstNI CCWGG 2 cut(s) 263, 393
BstSCI CCNGG 2 cut(s) 261, 391
BstSFI CTRYAG 4 cut(s) 490, 1200, 1314, 1345
BstV1I GCAGC 4 cut(s) 373, 799, 838, 1386
BstX2I RGATCY 1 cut(s) 922
BstYI RGATCY 1 cut(s) 922
Bsu36I CCTNAGG 1 cut(s) 290
BsuRI GGCC 1 cut(s) 41
BtsCI GGATG 5 cut(s) 165, 596, 637, 717, 1085
BtsI GCAGTG 1 cut(s) 1299
BtsIMutI CAGTG 2 cut(s) 382, 1299
BveI ACCTGC 4 cut(s) 474, 823, 876, 1321
Cac8I GCNNGC 1 cut(s) 1225
CaiI CAGNNNCTG 1 cut(s) 355
CfoI GCGC 2 cut(s) 313, 1356
Csp6I GTAC 2 cut(s) 495, 520
CviAII CATG 2 cut(s) 749, 882
CviQI GTAC 2 cut(s) 495, 520
DdeI CTNAG 7 cut(s) 167, 270, 290, 413, 573, 597, 1048
DpnI GATC 3 cut(s) 516, 924, 1160
DpnII GATC 3 cut(s) 514, 922, 1158
Eam1104I CTCTTC 2 cut(s) 141, 291
EarI CTCTTC 2 cut(s) 141, 291
Ecl136II GAGCTC 1 cut(s) 130
Eco130I CCWWGG 1 cut(s) 192
Eco147I AGGCCT 1 cut(s) 41
Eco24I GRGCYC 1 cut(s) 132
Eco32I GATATC 1 cut(s) 405
Eco53kI GAGCTC 1 cut(s) 130
Eco57I CTGAAG 2 cut(s) 936, 1017
Eco81I CCTNAGG 1 cut(s) 290
Eco88I CYCGRG 3 cut(s) 220, 1448, 1485
EcoICRI GAGCTC 1 cut(s) 130
EcoNI CCTNNNNNAGG 1 cut(s) 883
EcoRI GAATTC 2 cut(s) 451, 603
EcoRII CCWGG 2 cut(s) 261, 391
EcoRV GATATC 1 cut(s) 405
EcoT14I CCWWGG 1 cut(s) 192
EcoT38I GRGCYC 1 cut(s) 132
ErhI CCWWGG 1 cut(s) 192
FaeI CATG 2 cut(s) 752, 885
FalI AAGNNNNNCTT 2 cut(s) 1451, 1483
FaqI GGGAC 2 cut(s) 481, 1375
FatI CATG 2 cut(s) 748, 881
FauNDI CATATG 1 cut(s) 472
FbaI TGATCA 1 cut(s) 1158
FblI GTMKAC 1 cut(s) 1495
Fnu4HI GCNGC 6 cut(s) 78, 81, 387, 788, 852, 1375
FokI GGATG 5 cut(s) 172, 603, 644, 724, 1092
FriOI GRGCYC 1 cut(s) 132
Fsp4HI GCNGC 6 cut(s) 78, 81, 387, 788, 852, 1375
FspBI CTAG 6 cut(s) 198, 656, 791, 855, 1305, 1502
GlaI GCGC 2 cut(s) 312, 1355
GluI GCNGC 6 cut(s) 78, 81, 387, 788, 852, 1375
GsuI CTGGAG 3 cut(s) 245, 344, 375
HaeIII GGCC 1 cut(s) 41
HhaI GCGC 2 cut(s) 313, 1356
Hin1II CATG 2 cut(s) 752, 885
Hin6I GCGC 2 cut(s) 311, 1354
HinP1I GCGC 2 cut(s) 311, 1354
HincII GTYRAC 3 cut(s) 227, 1310, 1496
HindII GTYRAC 3 cut(s) 227, 1310, 1496
HindIII AAGCTT 1 cut(s) 1465
HinfI GANTC 9 cut(s) 8, 188, 223, 316, 340, 1022, 1169, 1216, 1478
Hpy166II GTNNAC 3 cut(s) 227, 1310, 1496
Hpy188III TCNNGA 6 cut(s) 536, 651, 1077, 1397, 1448, 1487
Hpy8I GTNNAC 3 cut(s) 227, 1310, 1496
Hpy99I CGWCG 1 cut(s) 1500
HpyAV CCTTC 6 cut(s) 31, 322, 695, 1129, 1354, 1403
HpyCH4III ACNGT 4 cut(s) 377, 494, 524, 1074
HpyCH4IV ACGT 2 cut(s) 85, 1089
HpyF10VI GCNNNNNNNGC 6 cut(s) 74, 169, 203, 674, 1353, 1511
HpyF3I CTNAG 7 cut(s) 167, 270, 290, 413, 573, 597, 1048
HpySE526I ACGT 2 cut(s) 85, 1089
Hsp92II CATG 2 cut(s) 752, 885
HspAI GCGC 2 cut(s) 311, 1354
Ksp22I TGATCA 1 cut(s) 1158
Kzo9I GATC 3 cut(s) 514, 922, 1158
LmnI GCTCC 6 cut(s) 127, 264, 394, 480, 867, 880
Lsp1109I GCAGC 4 cut(s) 373, 799, 838, 1386
LweI GCATC 8 cut(s) 150, 418, 493, 581, 655, 774, 1093, 1289
MaeI CTAG 6 cut(s) 198, 656, 791, 855, 1305, 1502
MaeII ACGT 2 cut(s) 85, 1089
MaeIII GTNAC 3 cut(s) 716, 1015, 1090
MalI GATC 3 cut(s) 516, 924, 1160
MboI GATC 3 cut(s) 514, 922, 1158
MboII GAAGA 9 cut(s) 46, 158, 308, 772, 884, 942, 1010, 1178, 1552
MflI RGATCY 1 cut(s) 922
MhlI GDGCHC 2 cut(s) 132, 1070
MluCI AATT 9 cut(s) 20, 451, 456, 603, 637, 1005, 1040, 1175, 1208
MlyI GAGTC 3 cut(s) 17, 232, 310
MmeI TCCRAC 3 cut(s) 78, 165, 1248
MseI TTAA 6 cut(s) 18, 398, 510, 822, 1259, 1332
MslI CAYNNNNRTG 1 cut(s) 426
MspCI CTTAAG 1 cut(s) 509
MspR9I CCNGG 2 cut(s) 263, 393
Mva1269I GAATGC 1 cut(s) 679
MvaI CCWGG 2 cut(s) 263, 393
MwoI GCNNNNNNNGC 6 cut(s) 74, 169, 203, 674, 1353, 1511
NdeI CATATG 1 cut(s) 472
NdeII GATC 3 cut(s) 514, 922, 1158
NlaIII CATG 2 cut(s) 752, 885
NmuCI GTSAC 1 cut(s) 1015
NspV TTCGAA 1 cut(s) 1009
PaeR7I CTCGAG 2 cut(s) 220, 1448
PaqCI CACCTGC 2 cut(s) 474, 823
PceI AGGCCT 1 cut(s) 41
PcsI WCGNNNNNNNCGW 1 cut(s) 1492
PctI GAATGC 1 cut(s) 679
PfeI GAWTC 6 cut(s) 188, 340, 1022, 1169, 1216, 1478
PflMI CCANNNNNTGG 1 cut(s) 737
PfoI TCCNGGA 1 cut(s) 261
PkrI GCNGC 6 cut(s) 79, 82, 388, 789, 853, 1376
PleI GAGTC 3 cut(s) 16, 231, 310
PpsI GAGTC 3 cut(s) 16, 231, 310
Ppu21I YACGTR 1 cut(s) 86
Psp124BI GAGCTC 1 cut(s) 132
Psp6I CCWGG 2 cut(s) 261, 391
PspGI CCWGG 2 cut(s) 261, 391
PspXI VCTCGAGB 1 cut(s) 220
PstI CTGCAG 3 cut(s) 1204, 1318, 1349
PstNI CAGNNNCTG 1 cut(s) 355
PsuI RGATCY 1 cut(s) 922
RsaI GTAC 2 cut(s) 496, 521
RsaNI GTAC 2 cut(s) 495, 520
RseI CAYNNNNRTG 1 cut(s) 426
SacI GAGCTC 1 cut(s) 132
SalI GTCGAC 1 cut(s) 1494
SaqAI TTAA 6 cut(s) 18, 398, 510, 822, 1259, 1332
SatI GCNGC 6 cut(s) 78, 81, 387, 788, 852, 1375
Sau3AI GATC 3 cut(s) 514, 922, 1158
SchI GAGTC 3 cut(s) 17, 232, 310
ScrFI CCNGG 2 cut(s) 263, 393
SduI GDGCHC 2 cut(s) 132, 1070
SfaNI GCATC 8 cut(s) 150, 418, 493, 581, 655, 774, 1093, 1289
SfcI CTRYAG 4 cut(s) 490, 1200, 1314, 1345
Sfr274I CTCGAG 2 cut(s) 220, 1448
SfuI TTCGAA 1 cut(s) 1009
SlaI CTCGAG 2 cut(s) 220, 1448
SmiMI CAYNNNNRTG 1 cut(s) 426
SmlI CTYRAG 3 cut(s) 220, 509, 1448
SmoI CTYRAG 3 cut(s) 220, 509, 1448
SpeI ACTAGT 1 cut(s) 655
Sse9I AATT 9 cut(s) 20, 451, 456, 603, 637, 1005, 1040, 1175, 1208
SseBI AGGCCT 1 cut(s) 41
SsiI CCGC 2 cut(s) 77, 80
SspMI CTAG 6 cut(s) 198, 656, 791, 855, 1305, 1502
SstI GAGCTC 1 cut(s) 132
StuI AGGCCT 1 cut(s) 41
StyD4I CCNGG 2 cut(s) 261, 391
StyI CCWWGG 1 cut(s) 192
TaaI ACNGT 4 cut(s) 377, 494, 524, 1074
TaiI ACGT 2 cut(s) 88, 1092
TaqI TCGA 5 cut(s) 137, 221, 1009, 1449, 1495
TasI AATT 9 cut(s) 20, 451, 456, 603, 637, 1005, 1040, 1175, 1208
TatI WGTACW 1 cut(s) 494
TauI GCSGC 2 cut(s) 80, 83
TfiI GAWTC 6 cut(s) 188, 340, 1022, 1169, 1216, 1478
Tru1I TTAA 6 cut(s) 18, 398, 510, 822, 1259, 1332
Tru9I TTAA 6 cut(s) 18, 398, 510, 822, 1259, 1332
TscAI CASTG 2 cut(s) 382, 1306
TseFI GTSAC 1 cut(s) 1015
TseI GCWGC 4 cut(s) 386, 787, 851, 1374
Tsp45I GTSAC 1 cut(s) 1015
TspDTI ATGAA 5 cut(s) 459, 648, 673, 714, 1017
TspGWI ACGGA 1 cut(s) 1015
TspRI CASTG 2 cut(s) 382, 1306
Van91I CCANNNNNTGG 1 cut(s) 737
Vha464I CTTAAG 1 cut(s) 509
XagI CCTNNNNNAGG 1 cut(s) 883
XapI RAATTY 4 cut(s) 451, 603, 637, 1005
XhoI CTCGAG 2 cut(s) 220, 1448
XmiI GTMKAC 1 cut(s) 1495
XspI CTAG 6 cut(s) 198, 656, 791, 855, 1305, 1502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.