pycom14g15680

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
18229782 .. 18232630
2849 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g15680.1

Sequence Viewer

Length: 1611 bp
ATGCATTGGCGGAAATGGACGAGTCCGAGCTTGTATTGTGTTCGGTTTGCTGTCGAATTTTGTTTGACTTTGCTTGGTGGGTTTTGGGTTTTGTATCAGAAATTGACGGCGCTGAAGAAGGCGTACGCCGAGATAATCCTCAACACGGCGAAAGAGGCGGCGGTTCGAATTGTGGTGTCGGAGAGGAAAGCTCTGCGGTTCCAGAGGGAGCTCTTTACGGCGAAAGACGAGGCCTTTCGGATGCTTCTTAGGCTCAAACAAATGTTGGATTCGAAGGCTGGTGAGGCAAAGATGATGTCCTTGAGTCAACAAGAAAAGATTGACGAACTCGAAGCGCAGCTGCAGGAAGCTGAGGATATAGTGAAGGAGCTTAGGGAAGAGTTGAGTGAAGTGCAGGCTCAACTGGAGAAGGCGAGAAGCAATCCAAGACAGCCGGATGGGCAAAATTTAGAGAGTGATACTGCAGCTCGAGGGTCAATAACATCGCAATTGAATTTGCAGCTAGATGCAATTGCAACTCAAGAAACGAATTCAATTTCGAATGGGACATATGAGAGGAAAGGGTGTTACGGTGGAAATGATTCTCTTAAGGATAATTACTATGTTCAAAATCCTGATTTCGCCTCGTTAGTAATGAGAAGTAAAGATCCTGAGTTATACAGAAATGGATGCACTCAGAGAATTCGTGCATTTGAAAGAAACCTGTTGGATGAAAAATTCTCTCTTTCTGGACTTGTTGATGATGGGAAGAATGTAACACTCATCGGAGGAGATGATGAACAACTGTGTAAAACCCCTAAAATAAACAGTGATAATACGAATGGGGTAGAGGAGAACCTGGAAGAACTGAAAGTGATGCAGGCAGATGGTAGCCATATTCAAGCACCTGCCTTTACGTCCTTTCAGAAGAAGAGAAAGAGAGCAGCTAGATTTAGGAGAAGTAAAGCTCCCTCATGCAGGTATCTTGATCCTCATCAGTTGATGGAAATGCGCCAAGTATCTGATTTATCATGCACTAGAACTTCTGCTTCTTCACTCAATAACAGTGTTCTCGCAGATAATGCTTCCAAGAAGTCTGAAGATGAAATTCAAAAAGTCACATCATCCATTTCAACCTCAAAAATACTCCCGGATAAAACTGAAACGAGTATACAGTCGGAATGTGGTAATGTTACTGAAAATGATAGTGTTCATAAGGCAACGAATGATGACAAGACGTTTATTGAAGAATCCAGATTGACCGGACAGGCGTGTATATCTGCTGAGAGCTTGAAGGTTCTGGCATGCAAAACAGATGTTGAAAAAGATTATCCATTAGATAAGTCAGATACGAAAGTATCCGATTTAGATGATGGCACTGCCAGTCAACCTGAAAACAATAAATTTCTCAAATATACATTCTGCAGAAAGCGCAAGAAGGACACGTTGAGCAACCCTGAAAGCAAGTCTCTTCTTGACAATGACACTTTGGAAAGGAACACAGGCGAGGAACAAAATGGTTCTATAGAGCCACAGAAATCGAGCTTGTTGATTGAATCATCCCGGGAAAGTCGACGACTAGCACAGGTTGCTCGTCAGCTTATATCTTTGTCGGAGAAGAAGTGGCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

537

Amino Acids

60.52

Weight (kDa)

6.29

Isoelectric Point (pI)

44.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 895
Acc36I ACCTGC 2 cut(s) 895, 948
AccI GTMKAC 2 cut(s) 1150, 1552
AciI CCGC 5 cut(s) 10, 158, 161, 196, 1606
AclWI GGATC 2 cut(s) 641, 962
AcsI RAATTY 8 cut(s) 56, 445, 493, 529, 681, 716, 1086, 1382
AcuI CTGAAG 2 cut(s) 134, 1098
AfaI GTAC 1 cut(s) 125
AfiI CCNNNNNNNGG 2 cut(s) 145, 957
AflII CTTAAG 1 cut(s) 587
AflIII ACRYGT 1 cut(s) 1422
AjnI CCWGG 1 cut(s) 837
Alw21I GWGCWC 1 cut(s) 213
Alw26I GTCTC 1 cut(s) 1452
AlwI GGATC 2 cut(s) 641, 962
Ama87I CYCGRG 2 cut(s) 468, 1542
AoxI GGCC 1 cut(s) 231
ApeKI GCWGC 5 cut(s) 337, 340, 464, 499, 923
ApoI RAATTY 8 cut(s) 56, 445, 493, 529, 681, 716, 1086, 1382
ArsI GACNNNNNNTTYG 2 cut(s) 281, 313
Asp700I GAANNNNTTC 1 cut(s) 580
AspLEI GCGC 4 cut(s) 112, 337, 993, 1413
AsuC2I CCSGG 3 cut(s) 1130, 1543, 1544
AsuHPI GGTGA 1 cut(s) 293
AsuII TTCGAA 3 cut(s) 166, 272, 539
AvaI CYCGRG 2 cut(s) 468, 1542
BaeI ACNNNNGTAYC 4 cut(s) 1320, 1320, 1353, 1353
BanII GRGCYC 1 cut(s) 213
BarI GAAGNNNNNNTAC 2 cut(s) 107, 139
Bbv12I GWGCWC 1 cut(s) 213
BbvCI CCTCAGC 1 cut(s) 351
BbvI GCAGC 5 cut(s) 327, 349, 476, 511, 935
BccI CCATC 5 cut(s) 431, 737, 860, 976, 1346
BceAI ACGGC 3 cut(s) 123, 162, 234
BciT130I CCWGG 1 cut(s) 839
BciVI GTATCC 1 cut(s) 1348
BcnI CCSGG 3 cut(s) 1130, 1543, 1544
BcoDI GTCTC 1 cut(s) 1452
BfaI CTAG 4 cut(s) 503, 927, 1017, 1559
BfmI CTRYAG 4 cut(s) 341, 462, 1402, 1503
BfoI RGCGCY 1 cut(s) 113
BfrI CTTAAG 1 cut(s) 587
BfuAI ACCTGC 2 cut(s) 895, 948
BfuI GTATCC 1 cut(s) 1348
BglI GCCNNNNNGGC 1 cut(s) 439
BisI GCNGC 6 cut(s) 159, 338, 341, 465, 500, 924
BlsI GCNGC 6 cut(s) 160, 339, 342, 466, 501, 925
Bme1390I CCNGG 4 cut(s) 839, 1130, 1543, 1544
BmeT110I CYCGRG 2 cut(s) 468, 1542
BmiI GGNNCC 1 cut(s) 200
BmrFI CCNGG 4 cut(s) 839, 1130, 1543, 1544
BmsI GCATC 4 cut(s) 231, 496, 659, 846
BplI GAGNNNNNCTC 2 cut(s) 175, 207
BpmI CTGGAG 1 cut(s) 425
Bpu10I CCTNAGC 2 cut(s) 351, 371
Bpu14I TTCGAA 3 cut(s) 166, 272, 539
BpuEI CTTGAG 2 cut(s) 322, 504
BpuMI CCSGG 3 cut(s) 1130, 1543, 1544
BsaBI GATNNNNATC 1 cut(s) 972
BsaJI CCNNGG 1 cut(s) 1542
BsaWI WCCGGW 1 cut(s) 1241
BsaXI ACNNNNNCTCC 1 cut(s) 1586
Bsc4I CCNNNNNNNGG 2 cut(s) 145, 957
Bse1I ACTGG 2 cut(s) 408, 1362
Bse8I GATNNNNATC 1 cut(s) 972
BseBI CCWGG 1 cut(s) 839
BseDI CCNNGG 1 cut(s) 1542
BseGI GGATG 6 cut(s) 246, 442, 674, 715, 1103, 1538
BseJI GATNNNNATC 1 cut(s) 972
BseLI CCNNNNNNNGG 2 cut(s) 145, 957
BseMII CTCAG 4 cut(s) 342, 642, 689, 1254
BseNI ACTGG 2 cut(s) 408, 1362
BseRI GAGGAG 2 cut(s) 783, 845
BseXI GCAGC 5 cut(s) 327, 349, 476, 511, 935
BsgI GTGCAG 1 cut(s) 413
BshFI GGCC 1 cut(s) 233
BsiHKAI GWGCWC 1 cut(s) 213
BsiHKCI CYCGRG 2 cut(s) 468, 1542
BsiSI CCGG 4 cut(s) 434, 1130, 1242, 1543
BsiWI CGTACG 1 cut(s) 123
BslFI GGGAC 1 cut(s) 559
BslI CCNNNNNNNGG 2 cut(s) 145, 957
BsmAI GTCTC 1 cut(s) 1452
BsmFI GGGAC 1 cut(s) 559
BsnI GGCC 1 cut(s) 233
BsoBI CYCGRG 2 cut(s) 468, 1542
Bsp119I TTCGAA 3 cut(s) 166, 272, 539
Bsp1286I GDGCHC 1 cut(s) 213
Bsp143I GATC 2 cut(s) 646, 967
BspACI CCGC 5 cut(s) 10, 158, 161, 196, 1606
BspANI GGCC 1 cut(s) 233
BspCNI CTCAG 4 cut(s) 343, 643, 688, 1255
BspLI GGNNCC 1 cut(s) 200
BspMAI CTGCAG 3 cut(s) 345, 466, 1406
BspMI ACCTGC 2 cut(s) 895, 948
BspPI GGATC 2 cut(s) 641, 962
BspT104I TTCGAA 3 cut(s) 166, 272, 539
BspTI CTTAAG 1 cut(s) 587
BsrI ACTGG 2 cut(s) 408, 1362
BssECI CCNNGG 1 cut(s) 1542
BssMI GATC 2 cut(s) 646, 967
BssNAI GTATAC 1 cut(s) 1151
Bst1107I GTATAC 1 cut(s) 1151
Bst2UI CCWGG 1 cut(s) 839
Bst4CI ACNGT 5 cut(s) 572, 786, 809, 1046, 1155
Bst6I CTCTTC 3 cut(s) 372, 905, 1455
BstAFI CTTAAG 1 cut(s) 587
BstAPI GCANNNNNTGC 2 cut(s) 1061, 1568
BstBI TTCGAA 3 cut(s) 166, 272, 539
BstC8I GCNNGC 3 cut(s) 396, 861, 1285
BstDEI CTNAG 6 cut(s) 248, 351, 371, 651, 675, 1263
BstENI CCTNNNNNAGG 1 cut(s) 955
BstF5I GGATG 6 cut(s) 246, 442, 674, 715, 1103, 1538
BstH2I RGCGCY 1 cut(s) 113
BstHHI GCGC 4 cut(s) 112, 337, 993, 1413
BstKTI GATC 2 cut(s) 649, 970
BstMAI GTCTC 1 cut(s) 1452
BstMBI GATC 2 cut(s) 646, 967
BstMWI GCNNNNNNNGC 7 cut(s) 155, 250, 284, 439, 1061, 1410, 1568
BstNI CCWGG 1 cut(s) 839
BstNSI RCATGY 1 cut(s) 1287
BstSCI CCNGG 4 cut(s) 837, 1128, 1541, 1542
BstSFI CTRYAG 4 cut(s) 341, 462, 1402, 1503
BstV1I GCAGC 5 cut(s) 327, 349, 476, 511, 935
BstX2I RGATCY 1 cut(s) 646
BstYI RGATCY 1 cut(s) 646
BstZ17I GTATAC 1 cut(s) 1151
BsuI GTATCC 1 cut(s) 1348
BsuRI GGCC 1 cut(s) 233
BtgZI GCGATG 1 cut(s) 468
BtsCI GGATG 6 cut(s) 246, 442, 674, 715, 1103, 1538
BtsI GCAGTG 1 cut(s) 1356
BtsIMutI CAGTG 3 cut(s) 814, 1051, 1356
BveI ACCTGC 2 cut(s) 895, 948
Cac8I GCNNGC 3 cut(s) 396, 861, 1285
CfoI GCGC 4 cut(s) 112, 337, 993, 1413
Cfr9I CCCGGG 1 cut(s) 1542
Csp6I GTAC 1 cut(s) 124
CviAII CATG 3 cut(s) 954, 1011, 1284
CviQI GTAC 1 cut(s) 124
DdeI CTNAG 6 cut(s) 248, 351, 371, 651, 675, 1263
DpnI GATC 2 cut(s) 648, 969
DpnII GATC 2 cut(s) 646, 967
Eam1104I CTCTTC 3 cut(s) 372, 905, 1455
EarI CTCTTC 3 cut(s) 372, 905, 1455
EciI GGCGGA 1 cut(s) 25
Ecl136II GAGCTC 1 cut(s) 211
Eco147I AGGCCT 1 cut(s) 233
Eco24I GRGCYC 1 cut(s) 213
Eco53kI GAGCTC 1 cut(s) 211
Eco57I CTGAAG 2 cut(s) 134, 1098
Eco88I CYCGRG 2 cut(s) 468, 1542
EcoICRI GAGCTC 1 cut(s) 211
EcoNI CCTNNNNNAGG 1 cut(s) 955
EcoRI GAATTC 2 cut(s) 529, 681
EcoRII CCWGG 1 cut(s) 837
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 213
FaeI CATG 3 cut(s) 957, 1014, 1287
FaqI GGGAC 1 cut(s) 559
FatI CATG 3 cut(s) 953, 1010, 1283
FauNDI CATATG 1 cut(s) 550
FblI GTMKAC 2 cut(s) 1150, 1552
Fnu4HI GCNGC 6 cut(s) 159, 338, 341, 465, 500, 924
FokI GGATG 6 cut(s) 253, 449, 681, 722, 1090, 1525
FriOI GRGCYC 1 cut(s) 213
Fsp4HI GCNGC 6 cut(s) 159, 338, 341, 465, 500, 924
FspBI CTAG 4 cut(s) 503, 927, 1017, 1559
GlaI GCGC 4 cut(s) 111, 336, 992, 1412
GluI GCNGC 6 cut(s) 159, 338, 341, 465, 500, 924
GsuI CTGGAG 1 cut(s) 425
HaeII RGCGCY 1 cut(s) 113
HaeIII GGCC 1 cut(s) 233
HapII CCGG 4 cut(s) 434, 1130, 1242, 1543
HhaI GCGC 4 cut(s) 112, 337, 993, 1413
Hin1II CATG 3 cut(s) 957, 1014, 1287
Hin6I GCGC 4 cut(s) 110, 335, 991, 1411
HinP1I GCGC 4 cut(s) 110, 335, 991, 1411
HincII GTYRAC 3 cut(s) 308, 1367, 1553
HindII GTYRAC 3 cut(s) 308, 1367, 1553
HinfI GANTC 6 cut(s) 22, 269, 304, 581, 1229, 1535
HpaII CCGG 4 cut(s) 434, 1130, 1242, 1543
HphI GGTGA 1 cut(s) 293
Hpy166II GTNNAC 4 cut(s) 308, 1151, 1367, 1553
Hpy188III TCNNGA 8 cut(s) 202, 521, 614, 650, 729, 965, 1233, 1454
Hpy8I GTNNAC 4 cut(s) 308, 1151, 1367, 1553
Hpy99I CGWCG 1 cut(s) 1557
HpyAV CCTTC 6 cut(s) 112, 268, 358, 403, 1267, 1411
HpyCH4III ACNGT 5 cut(s) 572, 786, 809, 1046, 1155
HpyCH4IV ACGT 3 cut(s) 896, 1217, 1424
HpyF10VI GCNNNNNNNGC 7 cut(s) 155, 250, 284, 439, 1061, 1410, 1568
HpyF3I CTNAG 6 cut(s) 248, 351, 371, 651, 675, 1263
HpySE526I ACGT 3 cut(s) 896, 1217, 1424
Hsp92II CATG 3 cut(s) 957, 1014, 1287
HspAI GCGC 4 cut(s) 110, 335, 991, 1411
Kzo9I GATC 2 cut(s) 646, 967
LmnI GCTCC 3 cut(s) 208, 367, 952
Lsp1109I GCAGC 5 cut(s) 327, 349, 476, 511, 935
LweI GCATC 4 cut(s) 231, 496, 659, 846
MaeI CTAG 4 cut(s) 503, 927, 1017, 1559
MaeII ACGT 3 cut(s) 896, 1217, 1424
MaeIII GTNAC 4 cut(s) 566, 754, 1096, 1171
MalI GATC 2 cut(s) 648, 969
MboI GATC 2 cut(s) 646, 967
MfeI CAATTG 2 cut(s) 488, 510
MflI RGATCY 1 cut(s) 646
MhlI GDGCHC 1 cut(s) 213
MlyI GAGTC 2 cut(s) 31, 313
MmeI TCCRAC 5 cut(s) 159, 246, 687, 1137, 1572
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 580
MseI TTAA 1 cut(s) 588
MspA1I CMGCKG 1 cut(s) 340
MspCI CTTAAG 1 cut(s) 587
MspI CCGG 4 cut(s) 434, 1130, 1242, 1543
MspR9I CCNGG 4 cut(s) 839, 1130, 1543, 1544
MunI CAATTG 2 cut(s) 488, 510
MvaI CCWGG 1 cut(s) 839
MwoI GCNNNNNNNGC 7 cut(s) 155, 250, 284, 439, 1061, 1410, 1568
NciI CCSGG 3 cut(s) 1130, 1543, 1544
NdeI CATATG 1 cut(s) 550
NdeII GATC 2 cut(s) 646, 967
NlaIII CATG 3 cut(s) 957, 1014, 1287
NlaIV GGNNCC 1 cut(s) 200
NmeAIII GCCGAG 1 cut(s) 154
NmuCI GTSAC 1 cut(s) 1096
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 1287
NspV TTCGAA 3 cut(s) 166, 272, 539
PaeI GCATGC 1 cut(s) 1287
PaeR7I CTCGAG 1 cut(s) 468
PaqCI CACCTGC 1 cut(s) 895
PceI AGGCCT 1 cut(s) 233
PdmI GAANNNNTTC 1 cut(s) 580
PfeI GAWTC 4 cut(s) 269, 581, 1229, 1535
Pfl23II CGTACG 1 cut(s) 123
PfoI TCCNGGA 1 cut(s) 1128
PkrI GCNGC 6 cut(s) 160, 339, 342, 466, 501, 925
PleI GAGTC 2 cut(s) 30, 312
PpsI GAGTC 2 cut(s) 30, 312
Psp124BI GAGCTC 1 cut(s) 213
Psp6I CCWGG 1 cut(s) 837
PspGI CCWGG 1 cut(s) 837
PspLI CGTACG 1 cut(s) 123
PspN4I GGNNCC 1 cut(s) 200
PspXI VCTCGAGB 1 cut(s) 468
PstI CTGCAG 3 cut(s) 345, 466, 1406
PsuI RGATCY 1 cut(s) 646
PvuII CAGCTG 1 cut(s) 340
RsaI GTAC 1 cut(s) 125
RsaNI GTAC 1 cut(s) 124
SacI GAGCTC 1 cut(s) 213
SalI GTCGAC 1 cut(s) 1551
SaqAI TTAA 1 cut(s) 588
SatI GCNGC 6 cut(s) 159, 338, 341, 465, 500, 924
Sau3AI GATC 2 cut(s) 646, 967
SchI GAGTC 2 cut(s) 31, 313
ScrFI CCNGG 4 cut(s) 839, 1130, 1543, 1544
SduI GDGCHC 1 cut(s) 213
SfaNI GCATC 4 cut(s) 231, 496, 659, 846
SfcI CTRYAG 4 cut(s) 341, 462, 1402, 1503
Sfr274I CTCGAG 1 cut(s) 468
SfuI TTCGAA 3 cut(s) 166, 272, 539
SlaI CTCGAG 1 cut(s) 468
SmaI CCCGGG 1 cut(s) 1544
SmlI CTYRAG 4 cut(s) 301, 468, 519, 587
SmoI CTYRAG 4 cut(s) 301, 468, 519, 587
SphI GCATGC 1 cut(s) 1287
SseBI AGGCCT 1 cut(s) 233
SsiI CCGC 5 cut(s) 10, 158, 161, 196, 1606
SspMI CTAG 4 cut(s) 503, 927, 1017, 1559
SstI GAGCTC 1 cut(s) 213
StuI AGGCCT 1 cut(s) 233
StyD4I CCNGG 4 cut(s) 837, 1128, 1541, 1542
TaaI ACNGT 5 cut(s) 572, 786, 809, 1046, 1155
TaiI ACGT 3 cut(s) 899, 1220, 1427
TaqI TCGA 8 cut(s) 54, 166, 272, 330, 469, 539, 1520, 1552
TauI GCSGC 1 cut(s) 161
TfiI GAWTC 4 cut(s) 269, 581, 1229, 1535
Tru1I TTAA 1 cut(s) 588
Tru9I TTAA 1 cut(s) 588
TscAI CASTG 3 cut(s) 814, 1051, 1363
TseFI GTSAC 1 cut(s) 1096
TseI GCWGC 5 cut(s) 337, 340, 464, 499, 923
Tsp45I GTSAC 1 cut(s) 1096
TspDTI ATGAA 4 cut(s) 726, 792, 1098, 1181
TspMI CCCGGG 1 cut(s) 1542
TspRI CASTG 3 cut(s) 814, 1051, 1363
Vha464I CTTAAG 1 cut(s) 587
XagI CCTNNNNNAGG 1 cut(s) 955
XapI RAATTY 8 cut(s) 56, 445, 493, 529, 681, 716, 1086, 1382
XceI RCATGY 1 cut(s) 1287
XhoI CTCGAG 1 cut(s) 468
XmaI CCCGGG 1 cut(s) 1542
XmiI GTMKAC 2 cut(s) 1150, 1552
XmnI GAANNNNTTC 1 cut(s) 580
XspI CTAG 4 cut(s) 503, 927, 1017, 1559
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.