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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G19010 AT1G19010 AT1G74860 |
| fragaria_vesca | FvH4_5g16190 FvH4_5g16190 FvH4_6g49700 FvH4_6g49700 |
| malus_domestica | MD06G1183100.v1.1 MD09G1042200.v1.1 MD14G1189100.v1.1 MD17G1043600.v1.1 |
| prunus_persica | Prupe.3G275400_v2.0.a1 Prupe.3G275500_v2.0.a1 Prupe.5G181500_v2.0.a1 Prupe.5G181800_v2.0.a1 |
| pyrus_communis | pycom06g16210 pycom111g03310 pycom14g15680 pycom17g03890 |
| rosa_chinensis | RchiOBHm_Chr2g0169731 RchiOBHm_Chr7g0179941 |
| rosa_laevigata | RLG00000005308 RLG00000021897 |
| rosa_multiflora | Rmu_ssc0000247.1_g000001 Rmu_ssc0000389.1_g000031 |
| rosa_roxburghii | Rroxscaffold_2G00081840 Rroxscaffold_3G00273290 |
| rosa_rugosa | Rorug02G0542500 Rorug06G0429300 |
| rosa_samantha | Rh2BG627000 Rh2CG596500 Rh2DG637900 Rh7AG029800 Rh7BG029000 Rh7CG030600 Rh7DG030000 |
| rosa_wichuraiana | Rw2G050970 Rw7G002380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 895 |
| Acc36I | ACCTGC | 2 cut(s) | 895, 948 |
| AccI | GTMKAC | 2 cut(s) | 1150, 1552 |
| AciI | CCGC | 5 cut(s) | 10, 158, 161, 196, 1606 |
| AclWI | GGATC | 2 cut(s) | 641, 962 |
| AcsI | RAATTY | 8 cut(s) | 56, 445, 493, 529, 681, 716, 1086, 1382 |
| AcuI | CTGAAG | 2 cut(s) | 134, 1098 |
| AfaI | GTAC | 1 cut(s) | 125 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 145, 957 |
| AflII | CTTAAG | 1 cut(s) | 587 |
| AflIII | ACRYGT | 1 cut(s) | 1422 |
| AjnI | CCWGG | 1 cut(s) | 837 |
| Alw21I | GWGCWC | 1 cut(s) | 213 |
| Alw26I | GTCTC | 1 cut(s) | 1452 |
| AlwI | GGATC | 2 cut(s) | 641, 962 |
| Ama87I | CYCGRG | 2 cut(s) | 468, 1542 |
| AoxI | GGCC | 1 cut(s) | 231 |
| ApeKI | GCWGC | 5 cut(s) | 337, 340, 464, 499, 923 |
| ApoI | RAATTY | 8 cut(s) | 56, 445, 493, 529, 681, 716, 1086, 1382 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 281, 313 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 580 |
| AspLEI | GCGC | 4 cut(s) | 112, 337, 993, 1413 |
| AsuC2I | CCSGG | 3 cut(s) | 1130, 1543, 1544 |
| AsuHPI | GGTGA | 1 cut(s) | 293 |
| AsuII | TTCGAA | 3 cut(s) | 166, 272, 539 |
| AvaI | CYCGRG | 2 cut(s) | 468, 1542 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1320, 1320, 1353, 1353 |
| BanII | GRGCYC | 1 cut(s) | 213 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 107, 139 |
| Bbv12I | GWGCWC | 1 cut(s) | 213 |
| BbvCI | CCTCAGC | 1 cut(s) | 351 |
| BbvI | GCAGC | 5 cut(s) | 327, 349, 476, 511, 935 |
| BccI | CCATC | 5 cut(s) | 431, 737, 860, 976, 1346 |
| BceAI | ACGGC | 3 cut(s) | 123, 162, 234 |
| BciT130I | CCWGG | 1 cut(s) | 839 |
| BciVI | GTATCC | 1 cut(s) | 1348 |
| BcnI | CCSGG | 3 cut(s) | 1130, 1543, 1544 |
| BcoDI | GTCTC | 1 cut(s) | 1452 |
| BfaI | CTAG | 4 cut(s) | 503, 927, 1017, 1559 |
| BfmI | CTRYAG | 4 cut(s) | 341, 462, 1402, 1503 |
| BfoI | RGCGCY | 1 cut(s) | 113 |
| BfrI | CTTAAG | 1 cut(s) | 587 |
| BfuAI | ACCTGC | 2 cut(s) | 895, 948 |
| BfuI | GTATCC | 1 cut(s) | 1348 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 439 |
| BisI | GCNGC | 6 cut(s) | 159, 338, 341, 465, 500, 924 |
| BlsI | GCNGC | 6 cut(s) | 160, 339, 342, 466, 501, 925 |
| Bme1390I | CCNGG | 4 cut(s) | 839, 1130, 1543, 1544 |
| BmeT110I | CYCGRG | 2 cut(s) | 468, 1542 |
| BmiI | GGNNCC | 1 cut(s) | 200 |
| BmrFI | CCNGG | 4 cut(s) | 839, 1130, 1543, 1544 |
| BmsI | GCATC | 4 cut(s) | 231, 496, 659, 846 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 175, 207 |
| BpmI | CTGGAG | 1 cut(s) | 425 |
| Bpu10I | CCTNAGC | 2 cut(s) | 351, 371 |
| Bpu14I | TTCGAA | 3 cut(s) | 166, 272, 539 |
| BpuEI | CTTGAG | 2 cut(s) | 322, 504 |
| BpuMI | CCSGG | 3 cut(s) | 1130, 1543, 1544 |
| BsaBI | GATNNNNATC | 1 cut(s) | 972 |
| BsaJI | CCNNGG | 1 cut(s) | 1542 |
| BsaWI | WCCGGW | 1 cut(s) | 1241 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 1586 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 145, 957 |
| Bse1I | ACTGG | 2 cut(s) | 408, 1362 |
| Bse8I | GATNNNNATC | 1 cut(s) | 972 |
| BseBI | CCWGG | 1 cut(s) | 839 |
| BseDI | CCNNGG | 1 cut(s) | 1542 |
| BseGI | GGATG | 6 cut(s) | 246, 442, 674, 715, 1103, 1538 |
| BseJI | GATNNNNATC | 1 cut(s) | 972 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 145, 957 |
| BseMII | CTCAG | 4 cut(s) | 342, 642, 689, 1254 |
| BseNI | ACTGG | 2 cut(s) | 408, 1362 |
| BseRI | GAGGAG | 2 cut(s) | 783, 845 |
| BseXI | GCAGC | 5 cut(s) | 327, 349, 476, 511, 935 |
| BsgI | GTGCAG | 1 cut(s) | 413 |
| BshFI | GGCC | 1 cut(s) | 233 |
| BsiHKAI | GWGCWC | 1 cut(s) | 213 |
| BsiHKCI | CYCGRG | 2 cut(s) | 468, 1542 |
| BsiSI | CCGG | 4 cut(s) | 434, 1130, 1242, 1543 |
| BsiWI | CGTACG | 1 cut(s) | 123 |
| BslFI | GGGAC | 1 cut(s) | 559 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 145, 957 |
| BsmAI | GTCTC | 1 cut(s) | 1452 |
| BsmFI | GGGAC | 1 cut(s) | 559 |
| BsnI | GGCC | 1 cut(s) | 233 |
| BsoBI | CYCGRG | 2 cut(s) | 468, 1542 |
| Bsp119I | TTCGAA | 3 cut(s) | 166, 272, 539 |
| Bsp1286I | GDGCHC | 1 cut(s) | 213 |
| Bsp143I | GATC | 2 cut(s) | 646, 967 |
| BspACI | CCGC | 5 cut(s) | 10, 158, 161, 196, 1606 |
| BspANI | GGCC | 1 cut(s) | 233 |
| BspCNI | CTCAG | 4 cut(s) | 343, 643, 688, 1255 |
| BspLI | GGNNCC | 1 cut(s) | 200 |
| BspMAI | CTGCAG | 3 cut(s) | 345, 466, 1406 |
| BspMI | ACCTGC | 2 cut(s) | 895, 948 |
| BspPI | GGATC | 2 cut(s) | 641, 962 |
| BspT104I | TTCGAA | 3 cut(s) | 166, 272, 539 |
| BspTI | CTTAAG | 1 cut(s) | 587 |
| BsrI | ACTGG | 2 cut(s) | 408, 1362 |
| BssECI | CCNNGG | 1 cut(s) | 1542 |
| BssMI | GATC | 2 cut(s) | 646, 967 |
| BssNAI | GTATAC | 1 cut(s) | 1151 |
| Bst1107I | GTATAC | 1 cut(s) | 1151 |
| Bst2UI | CCWGG | 1 cut(s) | 839 |
| Bst4CI | ACNGT | 5 cut(s) | 572, 786, 809, 1046, 1155 |
| Bst6I | CTCTTC | 3 cut(s) | 372, 905, 1455 |
| BstAFI | CTTAAG | 1 cut(s) | 587 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1061, 1568 |
| BstBI | TTCGAA | 3 cut(s) | 166, 272, 539 |
| BstC8I | GCNNGC | 3 cut(s) | 396, 861, 1285 |
| BstDEI | CTNAG | 6 cut(s) | 248, 351, 371, 651, 675, 1263 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 955 |
| BstF5I | GGATG | 6 cut(s) | 246, 442, 674, 715, 1103, 1538 |
| BstH2I | RGCGCY | 1 cut(s) | 113 |
| BstHHI | GCGC | 4 cut(s) | 112, 337, 993, 1413 |
| BstKTI | GATC | 2 cut(s) | 649, 970 |
| BstMAI | GTCTC | 1 cut(s) | 1452 |
| BstMBI | GATC | 2 cut(s) | 646, 967 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 155, 250, 284, 439, 1061, 1410, 1568 |
| BstNI | CCWGG | 1 cut(s) | 839 |
| BstNSI | RCATGY | 1 cut(s) | 1287 |
| BstSCI | CCNGG | 4 cut(s) | 837, 1128, 1541, 1542 |
| BstSFI | CTRYAG | 4 cut(s) | 341, 462, 1402, 1503 |
| BstV1I | GCAGC | 5 cut(s) | 327, 349, 476, 511, 935 |
| BstX2I | RGATCY | 1 cut(s) | 646 |
| BstYI | RGATCY | 1 cut(s) | 646 |
| BstZ17I | GTATAC | 1 cut(s) | 1151 |
| BsuI | GTATCC | 1 cut(s) | 1348 |
| BsuRI | GGCC | 1 cut(s) | 233 |
| BtgZI | GCGATG | 1 cut(s) | 468 |
| BtsCI | GGATG | 6 cut(s) | 246, 442, 674, 715, 1103, 1538 |
| BtsI | GCAGTG | 1 cut(s) | 1356 |
| BtsIMutI | CAGTG | 3 cut(s) | 814, 1051, 1356 |
| BveI | ACCTGC | 2 cut(s) | 895, 948 |
| Cac8I | GCNNGC | 3 cut(s) | 396, 861, 1285 |
| CfoI | GCGC | 4 cut(s) | 112, 337, 993, 1413 |
| Cfr9I | CCCGGG | 1 cut(s) | 1542 |
| Csp6I | GTAC | 1 cut(s) | 124 |
| CviAII | CATG | 3 cut(s) | 954, 1011, 1284 |
| CviQI | GTAC | 1 cut(s) | 124 |
| DdeI | CTNAG | 6 cut(s) | 248, 351, 371, 651, 675, 1263 |
| DpnI | GATC | 2 cut(s) | 648, 969 |
| DpnII | GATC | 2 cut(s) | 646, 967 |
| Eam1104I | CTCTTC | 3 cut(s) | 372, 905, 1455 |
| EarI | CTCTTC | 3 cut(s) | 372, 905, 1455 |
| EciI | GGCGGA | 1 cut(s) | 25 |
| Ecl136II | GAGCTC | 1 cut(s) | 211 |
| Eco147I | AGGCCT | 1 cut(s) | 233 |
| Eco24I | GRGCYC | 1 cut(s) | 213 |
| Eco53kI | GAGCTC | 1 cut(s) | 211 |
| Eco57I | CTGAAG | 2 cut(s) | 134, 1098 |
| Eco88I | CYCGRG | 2 cut(s) | 468, 1542 |
| EcoICRI | GAGCTC | 1 cut(s) | 211 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 955 |
| EcoRI | GAATTC | 2 cut(s) | 529, 681 |
| EcoRII | CCWGG | 1 cut(s) | 837 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| EcoT38I | GRGCYC | 1 cut(s) | 213 |
| FaeI | CATG | 3 cut(s) | 957, 1014, 1287 |
| FaqI | GGGAC | 1 cut(s) | 559 |
| FatI | CATG | 3 cut(s) | 953, 1010, 1283 |
| FauNDI | CATATG | 1 cut(s) | 550 |
| FblI | GTMKAC | 2 cut(s) | 1150, 1552 |
| Fnu4HI | GCNGC | 6 cut(s) | 159, 338, 341, 465, 500, 924 |
| FokI | GGATG | 6 cut(s) | 253, 449, 681, 722, 1090, 1525 |
| FriOI | GRGCYC | 1 cut(s) | 213 |
| Fsp4HI | GCNGC | 6 cut(s) | 159, 338, 341, 465, 500, 924 |
| FspBI | CTAG | 4 cut(s) | 503, 927, 1017, 1559 |
| GlaI | GCGC | 4 cut(s) | 111, 336, 992, 1412 |
| GluI | GCNGC | 6 cut(s) | 159, 338, 341, 465, 500, 924 |
| GsuI | CTGGAG | 1 cut(s) | 425 |
| HaeII | RGCGCY | 1 cut(s) | 113 |
| HaeIII | GGCC | 1 cut(s) | 233 |
| HapII | CCGG | 4 cut(s) | 434, 1130, 1242, 1543 |
| HhaI | GCGC | 4 cut(s) | 112, 337, 993, 1413 |
| Hin1II | CATG | 3 cut(s) | 957, 1014, 1287 |
| Hin6I | GCGC | 4 cut(s) | 110, 335, 991, 1411 |
| HinP1I | GCGC | 4 cut(s) | 110, 335, 991, 1411 |
| HincII | GTYRAC | 3 cut(s) | 308, 1367, 1553 |
| HindII | GTYRAC | 3 cut(s) | 308, 1367, 1553 |
| HinfI | GANTC | 6 cut(s) | 22, 269, 304, 581, 1229, 1535 |
| HpaII | CCGG | 4 cut(s) | 434, 1130, 1242, 1543 |
| HphI | GGTGA | 1 cut(s) | 293 |
| Hpy166II | GTNNAC | 4 cut(s) | 308, 1151, 1367, 1553 |
| Hpy188III | TCNNGA | 8 cut(s) | 202, 521, 614, 650, 729, 965, 1233, 1454 |
| Hpy8I | GTNNAC | 4 cut(s) | 308, 1151, 1367, 1553 |
| Hpy99I | CGWCG | 1 cut(s) | 1557 |
| HpyAV | CCTTC | 6 cut(s) | 112, 268, 358, 403, 1267, 1411 |
| HpyCH4III | ACNGT | 5 cut(s) | 572, 786, 809, 1046, 1155 |
| HpyCH4IV | ACGT | 3 cut(s) | 896, 1217, 1424 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 155, 250, 284, 439, 1061, 1410, 1568 |
| HpyF3I | CTNAG | 6 cut(s) | 248, 351, 371, 651, 675, 1263 |
| HpySE526I | ACGT | 3 cut(s) | 896, 1217, 1424 |
| Hsp92II | CATG | 3 cut(s) | 957, 1014, 1287 |
| HspAI | GCGC | 4 cut(s) | 110, 335, 991, 1411 |
| Kzo9I | GATC | 2 cut(s) | 646, 967 |
| LmnI | GCTCC | 3 cut(s) | 208, 367, 952 |
| Lsp1109I | GCAGC | 5 cut(s) | 327, 349, 476, 511, 935 |
| LweI | GCATC | 4 cut(s) | 231, 496, 659, 846 |
| MaeI | CTAG | 4 cut(s) | 503, 927, 1017, 1559 |
| MaeII | ACGT | 3 cut(s) | 896, 1217, 1424 |
| MaeIII | GTNAC | 4 cut(s) | 566, 754, 1096, 1171 |
| MalI | GATC | 2 cut(s) | 648, 969 |
| MboI | GATC | 2 cut(s) | 646, 967 |
| MfeI | CAATTG | 2 cut(s) | 488, 510 |
| MflI | RGATCY | 1 cut(s) | 646 |
| MhlI | GDGCHC | 1 cut(s) | 213 |
| MlyI | GAGTC | 2 cut(s) | 31, 313 |
| MmeI | TCCRAC | 5 cut(s) | 159, 246, 687, 1137, 1572 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MroXI | GAANNNNTTC | 1 cut(s) | 580 |
| MseI | TTAA | 1 cut(s) | 588 |
| MspA1I | CMGCKG | 1 cut(s) | 340 |
| MspCI | CTTAAG | 1 cut(s) | 587 |
| MspI | CCGG | 4 cut(s) | 434, 1130, 1242, 1543 |
| MspR9I | CCNGG | 4 cut(s) | 839, 1130, 1543, 1544 |
| MunI | CAATTG | 2 cut(s) | 488, 510 |
| MvaI | CCWGG | 1 cut(s) | 839 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 155, 250, 284, 439, 1061, 1410, 1568 |
| NciI | CCSGG | 3 cut(s) | 1130, 1543, 1544 |
| NdeI | CATATG | 1 cut(s) | 550 |
| NdeII | GATC | 2 cut(s) | 646, 967 |
| NlaIII | CATG | 3 cut(s) | 957, 1014, 1287 |
| NlaIV | GGNNCC | 1 cut(s) | 200 |
| NmeAIII | GCCGAG | 1 cut(s) | 154 |
| NmuCI | GTSAC | 1 cut(s) | 1096 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 1 cut(s) | 1287 |
| NspV | TTCGAA | 3 cut(s) | 166, 272, 539 |
| PaeI | GCATGC | 1 cut(s) | 1287 |
| PaeR7I | CTCGAG | 1 cut(s) | 468 |
| PaqCI | CACCTGC | 1 cut(s) | 895 |
| PceI | AGGCCT | 1 cut(s) | 233 |
| PdmI | GAANNNNTTC | 1 cut(s) | 580 |
| PfeI | GAWTC | 4 cut(s) | 269, 581, 1229, 1535 |
| Pfl23II | CGTACG | 1 cut(s) | 123 |
| PfoI | TCCNGGA | 1 cut(s) | 1128 |
| PkrI | GCNGC | 6 cut(s) | 160, 339, 342, 466, 501, 925 |
| PleI | GAGTC | 2 cut(s) | 30, 312 |
| PpsI | GAGTC | 2 cut(s) | 30, 312 |
| Psp124BI | GAGCTC | 1 cut(s) | 213 |
| Psp6I | CCWGG | 1 cut(s) | 837 |
| PspGI | CCWGG | 1 cut(s) | 837 |
| PspLI | CGTACG | 1 cut(s) | 123 |
| PspN4I | GGNNCC | 1 cut(s) | 200 |
| PspXI | VCTCGAGB | 1 cut(s) | 468 |
| PstI | CTGCAG | 3 cut(s) | 345, 466, 1406 |
| PsuI | RGATCY | 1 cut(s) | 646 |
| PvuII | CAGCTG | 1 cut(s) | 340 |
| RsaI | GTAC | 1 cut(s) | 125 |
| RsaNI | GTAC | 1 cut(s) | 124 |
| SacI | GAGCTC | 1 cut(s) | 213 |
| SalI | GTCGAC | 1 cut(s) | 1551 |
| SaqAI | TTAA | 1 cut(s) | 588 |
| SatI | GCNGC | 6 cut(s) | 159, 338, 341, 465, 500, 924 |
| Sau3AI | GATC | 2 cut(s) | 646, 967 |
| SchI | GAGTC | 2 cut(s) | 31, 313 |
| ScrFI | CCNGG | 4 cut(s) | 839, 1130, 1543, 1544 |
| SduI | GDGCHC | 1 cut(s) | 213 |
| SfaNI | GCATC | 4 cut(s) | 231, 496, 659, 846 |
| SfcI | CTRYAG | 4 cut(s) | 341, 462, 1402, 1503 |
| Sfr274I | CTCGAG | 1 cut(s) | 468 |
| SfuI | TTCGAA | 3 cut(s) | 166, 272, 539 |
| SlaI | CTCGAG | 1 cut(s) | 468 |
| SmaI | CCCGGG | 1 cut(s) | 1544 |
| SmlI | CTYRAG | 4 cut(s) | 301, 468, 519, 587 |
| SmoI | CTYRAG | 4 cut(s) | 301, 468, 519, 587 |
| SphI | GCATGC | 1 cut(s) | 1287 |
| SseBI | AGGCCT | 1 cut(s) | 233 |
| SsiI | CCGC | 5 cut(s) | 10, 158, 161, 196, 1606 |
| SspMI | CTAG | 4 cut(s) | 503, 927, 1017, 1559 |
| SstI | GAGCTC | 1 cut(s) | 213 |
| StuI | AGGCCT | 1 cut(s) | 233 |
| StyD4I | CCNGG | 4 cut(s) | 837, 1128, 1541, 1542 |
| TaaI | ACNGT | 5 cut(s) | 572, 786, 809, 1046, 1155 |
| TaiI | ACGT | 3 cut(s) | 899, 1220, 1427 |
| TaqI | TCGA | 8 cut(s) | 54, 166, 272, 330, 469, 539, 1520, 1552 |
| TauI | GCSGC | 1 cut(s) | 161 |
| TfiI | GAWTC | 4 cut(s) | 269, 581, 1229, 1535 |
| Tru1I | TTAA | 1 cut(s) | 588 |
| Tru9I | TTAA | 1 cut(s) | 588 |
| TscAI | CASTG | 3 cut(s) | 814, 1051, 1363 |
| TseFI | GTSAC | 1 cut(s) | 1096 |
| TseI | GCWGC | 5 cut(s) | 337, 340, 464, 499, 923 |
| Tsp45I | GTSAC | 1 cut(s) | 1096 |
| TspDTI | ATGAA | 4 cut(s) | 726, 792, 1098, 1181 |
| TspMI | CCCGGG | 1 cut(s) | 1542 |
| TspRI | CASTG | 3 cut(s) | 814, 1051, 1363 |
| Vha464I | CTTAAG | 1 cut(s) | 587 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 955 |
| XapI | RAATTY | 8 cut(s) | 56, 445, 493, 529, 681, 716, 1086, 1382 |
| XceI | RCATGY | 1 cut(s) | 1287 |
| XhoI | CTCGAG | 1 cut(s) | 468 |
| XmaI | CCCGGG | 1 cut(s) | 1542 |
| XmiI | GTMKAC | 2 cut(s) | 1150, 1552 |
| XmnI | GAANNNNTTC | 1 cut(s) | 580 |
| XspI | CTAG | 4 cut(s) | 503, 927, 1017, 1559 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |