AT1G80740

C-5 cytosine-specific DNA methylase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
30342394 .. 30347048
4655 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G80740.1

Sequence Viewer

Length: 2376 bp
ATGGCAGCGAGAAACAAACAAAAGAAACGCGCTGAGCCAGAGTCAGATCTGTGCTTCGCTGGCAAACCAATGTCTGTTGTGGAGTCGACGATTCGATGGCCTCATCGCTACCAATCCAAGAAAACAAAGCTCCAAGCTCCGACCAAAAAACCTGCAAATAAGGGTGGCAAAAAAGAAGATGAAGAGATAATAAAGCAAGCTAAATGCCACTTTGACAAAGCTTTGGTTGATGGAGTTCTCATCAACCTAAACGACGATGTCTATGTCACGGGTCTACCAGGGAAGCTGAAATTCATTGCAAAAGTTATCGAGCTCTTTGAAGCTGATGATGGGGTGCCGTATTGTCGCTTTCGATGGTACTATCGGCCTGAAGATACTTTAATCGAAAGATTTTCCCACCTTGTGCAACCAAAGAGAGTGTTTCTCTCAAATGATGAGAATGACAATCCTCTCACCTGCATCTGGTCAAAAGTCAACATCGCTAAAGTCCCATTACCTAAGATTACCTCCAGAATCGAGCAAAGGGTTATTCCTCCTTGTGATTACTACTACGATATGAAGTACGAAGTTCCTTATCTCAACTTTACAAGTGCAGATGATGGTAGTGATGCCTCATCAAGTCTTTCAAGTGACTCTGCCTTGAATTGCTTTGAAAATCTCCACAAGGATGAAAAATTCTTATTGGATCTATACAGTGGGTGCGGAGCGATGTCCACAGGTTTCTGCATGGGAGCTTCCATATCAGGAGTAAAATTGATTACGAAATGGTCTGTGGATATAAATAAGTTTGCTTGTGATAGTCTTAAACTTAATCATCCTGAAACAGAGGTGAGAAACGAAGCCGCAGAAGATTTTCTAGCTCTTCTCAAAGAATGGAAAAGGCTCTGTGAGAAGTTTTCTCTCGTTTCAAGCACCGAACCAGTGGAATCAATTTCTGAGTTAGAAGATGAAGAAGTTGAAGAAAATGATGACATAGATGAGGCAAGTACTGGTGCTGAACTCGAACCTGGAGAGTTTGAAGTAGAAAAGTTCCTTGGCATCATGTTTGGAGATCCTCAAGGCACAGGGGAAAAGACACTTCAACTTATGGTAAGGTGGAAGGGATACAATTCTAGTTATGACACATGGGAACCTTACTCTGGCTTAGGCAACTGCAAGGAGAAGCTGAAGGAGTACGTGATAGATGGGTTTAAGTCTCATCTCTTACCACTTCCGGGTACTGTCTACACAGTGTGCGGTGGGCCCCCTTGCCAAGGGATCAGTGGGTATAACCGGTATAGAAACAATGAAGCACCGCTTGAAGATCAGAAGAACCAGCAACTTTTGGTGTTTTTAGACATCATTGACTTCCTCAAGCCAAACTATGTGCTGATGGAAAATGTTGTAGACCTTCTTAGGTTTTCAAAGGGTTTCCTGGCACGTCATGCTGTAGCTAGCTTTGTTGCGATGAATTACCAGACGCGGTTGGGCATGATGGCTGCTGGATCTTATGGGCTCCCTCAGCTTAGAAACAGGGTTTTTTTATGGGCTGCACAACCATCAGAGAAACTTCCCCCTTATCCCCTCCCAACACATGAAGTTGCTAAAAAGTTCAACACACCTAAAGAATTCAAAGATTTACAAGTTGGACGTATTCAAATGGAGTTCCTTAAATTGGACAACGCTCTTACGCTGGCTGATGCTATTAGTGATCTGCCACCGGTGACAAATTATGTGGCAAATGATGTAATGGATTATAATGATGCTGCTCCTAAGACAGAGTTTGAGAACTTTATTAGCCTCAAAAGATCTGAGACACTTTTACCCGCATTTGGTGGAGATCCGACACGCAGGTTGTTTGATCACCAACCCCTCGTATTAGGAGATGATGACTTGGAAAGAGTTTCCTACATACCAAAACAGAAGGGGGCAAACTATCGCGACATGCCTGGTGTTTTAGTTCACAACAACAAAGCGGAAATTAATCCTAGGTTTCGAGCAAAGTTGAAATCTGGAAAAAATGTGGTCCCTGCTTATGCAATTTCATTCATAAAAGGAAAATCAAAAAAGCCGTTTGGTAGACTTTGGGGTGATGAAATCGTTAACACTGTTGTGACAAGGGCTGAACCTCACAACCAGTGTGTAATCCATCCAATGCAAAACCGTGTGTTGTCTGTTCGTGAGAATGCGAGATTACAGGGGTTCCCTGATTGTTACAAGCTCTGTGGAACAATTAAGGAAAAGTACATCCAGGTTGGGAATGCTGTGGCAGTTCCTGTAGGGGTTGCATTAGGATATGCCTTTGGTATGGCGAGTCAAGGACTGACGGATGATGAACCAGTAATCAAGCTGCCATTCAAGTATCCCGAATGCATGCAGGCAAAGGATCAAATCTGA

Protein Analysis

791

Amino Acids

89.22

Weight (kDa)

5.99

Isoelectric Point (pI)

38.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAH PF01426 81 - 188 4.4e-12 BAH domain
Chromo PF00385 340 - 392 9.7e-09 Chromo (CHRromatin Organisation MOdifier) domain
DNA_methylase PF00145 407 - 759 3e-33 C-5 cytosine-specific DNA methylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1737
AarI CACCTGC 1 cut(s) 464
Acc36I ACCTGC 3 cut(s) 160, 464, 1821
AccB1I GGYRCC 1 cut(s) 334
AccI GTMKAC 5 cut(s) 86, 274, 1224, 1386, 2059
AccII CGCG 3 cut(s) 30, 1462, 1920
AciI CCGC 7 cut(s) 702, 843, 1236, 1295, 1462, 1806, 1955
AclWI GGATC 6 cut(s) 693, 1046, 1265, 1492, 1814, 2373
AcsI RAATTY 3 cut(s) 290, 674, 1607
AcuI CTGAAG 2 cut(s) 390, 1187
AdeI CACNNNGTG 2 cut(s) 403, 1233
AfaI GTAC 6 cut(s) 359, 563, 988, 1175, 1219, 2225
AfiI CCNNNNNNNGG 6 cut(s) 462, 1139, 1214, 1253, 1654, 1811
AgeI ACCGGT 2 cut(s) 1272, 1699
AjiI CACGTC 1 cut(s) 1421
AjnI CCWGG 5 cut(s) 277, 1006, 1413, 1927, 2229
AjuI GAANNNNNNNTTGG 2 cut(s) 1017, 1049
AleI CACNNNNGTG 1 cut(s) 2090
Alw21I GWGCWC 1 cut(s) 315
Alw26I GTCTC 2 cut(s) 1200, 1787
AlwI GGATC 6 cut(s) 693, 1046, 1265, 1492, 1814, 2373
AlwNI CAGNNNCTG 1 cut(s) 2255
AoxI GGCC 3 cut(s) 98, 365, 1241
ApaI GGGCCC 1 cut(s) 1245
ApeKI GCWGC 5 cut(s) 5, 1478, 1529, 1745, 2329
ApoI RAATTY 3 cut(s) 290, 674, 1607
AseI ATTAAT 1 cut(s) 1962
AsiGI ACCGGT 2 cut(s) 1272, 1699
Asp700I GAANNNNTTC 1 cut(s) 852
AspA2I CCTAGG 1 cut(s) 1967
AspLEI GCGC 1 cut(s) 32
AspS9I GGNCC 3 cut(s) 1241, 1242, 2005
AsuC2I CCSGG 1 cut(s) 1215
AsuHPI GGTGA 5 cut(s) 445, 841, 1714, 1835, 2081
AsuNHI GCTAGC 1 cut(s) 1433
AvaII GGWCC 1 cut(s) 2005
AvrII CCTAGG 1 cut(s) 1967
BaeGI GKGCMC 1 cut(s) 1245
BanI GGYRCC 1 cut(s) 334
BanII GRGCYC 3 cut(s) 315, 1245, 1497
Bbv12I GWGCWC 1 cut(s) 315
BbvCI CCTCAGC 1 cut(s) 1500
BbvI GCAGC 5 cut(s) 17, 1465, 1516, 1732, 2316
BceAI ACGGC 2 cut(s) 322, 2035
BciT130I CCWGG 5 cut(s) 279, 1008, 1415, 1929, 2231
BciVI GTATCC 2 cut(s) 1097, 2352
BclI TGATCA 1 cut(s) 1840
BcnI CCSGG 1 cut(s) 1215
BcoDI GTCTC 2 cut(s) 1200, 1787
BfaI CTAG 4 cut(s) 857, 1113, 1434, 1968
BfmI CTRYAG 2 cut(s) 1428, 2256
BfuAI ACCTGC 3 cut(s) 160, 464, 1821
BfuI GTATCC 2 cut(s) 1097, 2352
BglII AGATCT 2 cut(s) 46, 1787
BisI GCNGC 6 cut(s) 6, 843, 1479, 1530, 1746, 2330
BlnI CCTAGG 1 cut(s) 1967
BlpI GCTNAGC 1 cut(s) 33
BlsI GCNGC 6 cut(s) 7, 844, 1480, 1531, 1747, 2331
BmcAI AGTACT 1 cut(s) 988
Bme1390I CCNGG 6 cut(s) 279, 1008, 1215, 1415, 1929, 2231
Bme18I GGWCC 1 cut(s) 2005
BmgBI CACGTC 1 cut(s) 1421
BmgT120I GGNCC 3 cut(s) 1241, 1242, 2005
BmiI GGNNCC 7 cut(s) 336, 1131, 1243, 1244, 1496, 2007, 2183
BmrFI CCNGG 6 cut(s) 279, 1008, 1215, 1415, 1929, 2231
BmsI GCATC 5 cut(s) 468, 598, 1047, 1669, 1732
BmtI GCTAGC 1 cut(s) 1437
BplI GAGNNNNNCTC 2 cut(s) 408, 440
BpmI CTGGAG 2 cut(s) 493, 1029
Bpu10I CCTNAGC 2 cut(s) 1144, 1500
Bpu1102I GCTNAGC 1 cut(s) 33
BpuEI CTTGAG 2 cut(s) 1041, 1337
BpuMI CCSGG 1 cut(s) 1215
BsaAI YACGTR 1 cut(s) 1177
BsaJI CCNNGG 4 cut(s) 278, 1033, 1252, 1967
BsaWI WCCGGW 2 cut(s) 1272, 1699
Bsc4I CCNNNNNNNGG 6 cut(s) 462, 1139, 1214, 1253, 1654, 1811
Bse118I RCCGGY 2 cut(s) 1272, 1699
Bse1I ACTGG 4 cut(s) 920, 994, 2116, 2318
Bse3DI GCAATG 1 cut(s) 294
BseBI CCWGG 5 cut(s) 279, 1008, 1415, 1929, 2231
BseDI CCNNGG 4 cut(s) 278, 1033, 1252, 1967
BseGI GGATG 5 cut(s) 673, 814, 2128, 2226, 2314
BseLI CCNNNNNNNGG 6 cut(s) 462, 1139, 1214, 1253, 1654, 1811
BseMI GCAATG 1 cut(s) 294
BseMII CTCAG 4 cut(s) 24, 927, 1514, 1782
BseNI ACTGG 4 cut(s) 920, 994, 2116, 2318
BseSI GKGCMC 1 cut(s) 1245
BseXI GCAGC 5 cut(s) 17, 1465, 1516, 1732, 2316
BsgI GTGCAG 2 cut(s) 612, 1515
Bsh1236I CGCG 3 cut(s) 30, 1462, 1920
BshFI GGCC 3 cut(s) 100, 367, 1243
BshNI GGYRCC 1 cut(s) 334
BshTI ACCGGT 2 cut(s) 1272, 1699
BsiHKAI GWGCWC 1 cut(s) 315
BsiSI CCGG 3 cut(s) 1214, 1273, 1700
BslFI GGGAC 2 cut(s) 473, 1991
BslI CCNNNNNNNGG 6 cut(s) 462, 1139, 1214, 1253, 1654, 1811
BsmAI GTCTC 2 cut(s) 1200, 1787
BsmFI GGGAC 2 cut(s) 473, 1991
BsmI GAATGC 3 cut(s) 2170, 2245, 2354
BsnI GGCC 3 cut(s) 100, 367, 1243
Bsp120I GGGCCC 1 cut(s) 1241
Bsp1286I GDGCHC 3 cut(s) 315, 1245, 1497
Bsp1720I GCTNAGC 1 cut(s) 33
Bsp68I TCGCGA 1 cut(s) 1920
BspACI CCGC 7 cut(s) 702, 843, 1236, 1295, 1462, 1806, 1955
BspANI GGCC 3 cut(s) 100, 367, 1243
BspCNI CTCAG 4 cut(s) 25, 928, 1513, 1783
BspFNI CGCG 3 cut(s) 30, 1462, 1920
BspLI GGNNCC 7 cut(s) 336, 1131, 1243, 1244, 1496, 2007, 2183
BspMI ACCTGC 3 cut(s) 160, 464, 1821
BspOI GCTAGC 1 cut(s) 1437
BspPI GGATC 6 cut(s) 693, 1046, 1265, 1492, 1814, 2373
BspQI GCTCTTC 1 cut(s) 867
BspT107I GGYRCC 1 cut(s) 334
BsrDI GCAATG 1 cut(s) 294
BsrFI RCCGGY 2 cut(s) 1272, 1699
BsrI ACTGG 4 cut(s) 920, 994, 2116, 2318
BssAI RCCGGY 2 cut(s) 1272, 1699
BssECI CCNNGG 4 cut(s) 278, 1033, 1252, 1967
BssT1I CCWWGG 3 cut(s) 1033, 1252, 1967
Bst2UI CCWGG 5 cut(s) 279, 1008, 1415, 1929, 2231
Bst4CI ACNGT 5 cut(s) 695, 1222, 1231, 2089, 2144
Bst6I CTCTTC 2 cut(s) 177, 867
BstAPI GCANNNNNTGC 1 cut(s) 1424
BstBAI YACGTR 1 cut(s) 1177
BstC8I GCNNGC 6 cut(s) 61, 198, 1435, 1674, 2354, 2358
BstDEI CTNAG 9 cut(s) 33, 498, 936, 1144, 1394, 1500, 1505, 1752, 1791
BstENI CCTNNNNNAGG 1 cut(s) 1251
BstF5I GGATG 5 cut(s) 673, 814, 2128, 2226, 2314
BstFNI CGCG 3 cut(s) 30, 1462, 1920
BstHHI GCGC 1 cut(s) 32
BstMAI GTCTC 2 cut(s) 1200, 1787
BstMWI GCNNNNNNNGC 3 cut(s) 60, 1424, 1501
BstNI CCWGG 5 cut(s) 279, 1008, 1415, 1929, 2231
BstNSI RCATGY 2 cut(s) 1927, 2356
BstSCI CCNGG 6 cut(s) 277, 1006, 1213, 1413, 1927, 2229
BstSFI CTRYAG 2 cut(s) 1428, 2256
BstSLI GKGCMC 1 cut(s) 1245
BstUI CGCG 3 cut(s) 30, 1462, 1920
BstV1I GCAGC 5 cut(s) 17, 1465, 1516, 1732, 2316
BstX2I RGATCY 6 cut(s) 46, 685, 1051, 1484, 1787, 1819
BstYI RGATCY 6 cut(s) 46, 685, 1051, 1484, 1787, 1819
BsuI GTATCC 2 cut(s) 1097, 2352
BsuRI GGCC 3 cut(s) 100, 367, 1243
BtgZI GCGATG 4 cut(s) 89, 463, 722, 1460
BtrI CACGTC 1 cut(s) 1421
BtsCI GGATG 5 cut(s) 673, 814, 2128, 2226, 2314
BtsIMutI CAGTG 6 cut(s) 700, 927, 1236, 1267, 2085, 2123
BtuMI TCGCGA 1 cut(s) 1920
BveI ACCTGC 3 cut(s) 160, 464, 1821
Cac8I GCNNGC 6 cut(s) 61, 198, 1435, 1674, 2354, 2358
CaiI CAGNNNCTG 1 cut(s) 2255
CfoI GCGC 1 cut(s) 32
Cfr10I RCCGGY 2 cut(s) 1272, 1699
Cfr13I GGNCC 3 cut(s) 1241, 1242, 2005
CseI GACGC 1 cut(s) 1468
Csp6I GTAC 6 cut(s) 358, 562, 987, 1174, 1218, 2224
CspAI ACCGGT 2 cut(s) 1272, 1699
CspCI CAANNNNNGTGG 4 cut(s) 1695, 1730, 2185, 2220
CviAII CATG 8 cut(s) 727, 1042, 1125, 1424, 1471, 1574, 1924, 2353
CviQI GTAC 6 cut(s) 358, 562, 987, 1174, 1218, 2224
DdeI CTNAG 9 cut(s) 33, 498, 936, 1144, 1394, 1500, 1505, 1752, 1791
DraIII CACNNNGTG 2 cut(s) 403, 1233
Eam1104I CTCTTC 2 cut(s) 177, 867
EarI CTCTTC 2 cut(s) 177, 867
Ecl136II GAGCTC 1 cut(s) 313
Eco130I CCWWGG 3 cut(s) 1033, 1252, 1967
Eco24I GRGCYC 3 cut(s) 315, 1245, 1497
Eco47I GGWCC 1 cut(s) 2005
Eco53kI GAGCTC 1 cut(s) 313
Eco57I CTGAAG 2 cut(s) 390, 1187
EcoICRI GAGCTC 1 cut(s) 313
EcoNI CCTNNNNNAGG 1 cut(s) 1251
EcoO109I RGGNCCY 1 cut(s) 1242
EcoRI GAATTC 1 cut(s) 1607
EcoRII CCWGG 5 cut(s) 277, 1006, 1413, 1927, 2229
EcoT14I CCWWGG 3 cut(s) 1033, 1252, 1967
EcoT22I ATGCAT 1 cut(s) 2354
EcoT38I GRGCYC 3 cut(s) 315, 1245, 1497
ErhI CCWWGG 3 cut(s) 1033, 1252, 1967
FaeI CATG 8 cut(s) 730, 1045, 1128, 1427, 1474, 1577, 1927, 2356
FalI AAGNNNNNCTT 2 cut(s) 1281, 1313
FaqI GGGAC 2 cut(s) 473, 1991
FatI CATG 8 cut(s) 726, 1041, 1124, 1423, 1470, 1573, 1923, 2352
FauI CCCGC 1 cut(s) 1813
FbaI TGATCA 1 cut(s) 1840
FblI GTMKAC 5 cut(s) 86, 274, 1224, 1386, 2059
Fnu4HI GCNGC 6 cut(s) 6, 843, 1479, 1530, 1746, 2330
FokI GGATG 5 cut(s) 680, 801, 2115, 2213, 2321
FriOI GRGCYC 3 cut(s) 315, 1245, 1497
Fsp4HI GCNGC 6 cut(s) 6, 843, 1479, 1530, 1746, 2330
FspBI CTAG 4 cut(s) 857, 1113, 1434, 1968
GlaI GCGC 1 cut(s) 31
GluI GCNGC 6 cut(s) 6, 843, 1479, 1530, 1746, 2330
GsuI CTGGAG 2 cut(s) 493, 1029
HaeIII GGCC 3 cut(s) 100, 367, 1243
HapII CCGG 3 cut(s) 1214, 1273, 1700
HgaI GACGC 1 cut(s) 1468
HhaI GCGC 1 cut(s) 32
Hin1II CATG 8 cut(s) 730, 1045, 1128, 1427, 1474, 1577, 1927, 2356
Hin6I GCGC 1 cut(s) 30
HinP1I GCGC 1 cut(s) 30
HincII GTYRAC 3 cut(s) 87, 475, 2083
HindII GTYRAC 3 cut(s) 87, 475, 2083
HindIII AAGCTT 1 cut(s) 219
HinfI GANTC 7 cut(s) 41, 83, 91, 513, 632, 926, 2293
HpaI GTTAAC 1 cut(s) 2083
HpaII CCGG 3 cut(s) 1214, 1273, 1700
HphI GGTGA 5 cut(s) 445, 841, 1714, 1835, 2081
Hpy166II GTNNAC 9 cut(s) 87, 275, 475, 714, 1225, 1387, 1942, 2060, 2083
Hpy188I TCNGA 8 cut(s) 46, 141, 937, 1308, 1543, 1792, 1824, 2375
Hpy188III TCNNGA 7 cut(s) 510, 744, 818, 1919, 1992, 2159, 2345
Hpy8I GTNNAC 9 cut(s) 87, 275, 475, 714, 1225, 1387, 1942, 2060, 2083
Hpy99I CGWCG 2 cut(s) 91, 257
HpyAV CCTTC 4 cut(s) 1093, 1162, 1400, 1897
HpyCH4III ACNGT 5 cut(s) 695, 1222, 1231, 2089, 2144
HpyCH4IV ACGT 3 cut(s) 1176, 1420, 1630
HpyF10VI GCNNNNNNNGC 3 cut(s) 60, 1424, 1501
HpyF3I CTNAG 9 cut(s) 33, 498, 936, 1144, 1394, 1500, 1505, 1752, 1791
HpySE526I ACGT 3 cut(s) 1176, 1420, 1630
Hsp92II CATG 8 cut(s) 730, 1045, 1128, 1427, 1474, 1577, 1927, 2356
HspAI GCGC 1 cut(s) 30
Ksp22I TGATCA 1 cut(s) 1840
KspAI GTTAAC 1 cut(s) 2083
LguI GCTCTTC 1 cut(s) 867
LmnI GCTCC 6 cut(s) 135, 142, 704, 731, 1500, 1753
Lsp1109I GCAGC 5 cut(s) 17, 1465, 1516, 1732, 2316
LweI GCATC 5 cut(s) 468, 598, 1047, 1669, 1732
MaeI CTAG 4 cut(s) 857, 1113, 1434, 1968
MaeII ACGT 3 cut(s) 1176, 1420, 1630
MaeIII GTNAC 5 cut(s) 265, 629, 1702, 2092, 2192
MflI RGATCY 6 cut(s) 46, 685, 1051, 1484, 1787, 1819
MhlI GDGCHC 3 cut(s) 315, 1245, 1497
MlyI GAGTC 4 cut(s) 50, 92, 626, 2302
MmeI TCCRAC 3 cut(s) 164, 1606, 1847
Mph1103I ATGCAT 1 cut(s) 2354
MroXI GAANNNNTTC 1 cut(s) 852
MseI TTAA 8 cut(s) 380, 804, 810, 1191, 1650, 1962, 2082, 2214
MslI CAYNNNNRTG 2 cut(s) 666, 2090
MspI CCGG 3 cut(s) 1214, 1273, 1700
MspR9I CCNGG 6 cut(s) 279, 1008, 1215, 1415, 1929, 2231
Mva1269I GAATGC 3 cut(s) 2170, 2245, 2354
MvaI CCWGG 5 cut(s) 279, 1008, 1415, 1929, 2231
MvnI CGCG 3 cut(s) 30, 1462, 1920
MwoI GCNNNNNNNGC 3 cut(s) 60, 1424, 1501
NciI CCSGG 1 cut(s) 1215
NheI GCTAGC 1 cut(s) 1433
NlaIII CATG 8 cut(s) 730, 1045, 1128, 1427, 1474, 1577, 1927, 2356
NlaIV GGNNCC 7 cut(s) 336, 1131, 1243, 1244, 1496, 2007, 2183
NmuCI GTSAC 4 cut(s) 265, 629, 1702, 2092
NruI TCGCGA 1 cut(s) 1920
NsiI ATGCAT 1 cut(s) 2354
NspI RCATGY 2 cut(s) 1927, 2356
OliI CACNNNNGTG 1 cut(s) 2090
PaeI GCATGC 1 cut(s) 2356
PaqCI CACCTGC 1 cut(s) 464
PciSI GCTCTTC 1 cut(s) 867
PctI GAATGC 3 cut(s) 2170, 2245, 2354
PdmI GAANNNNTTC 1 cut(s) 852
PfeI GAWTC 3 cut(s) 91, 513, 926
PflFI GACNNNGTC 1 cut(s) 257
PinAI ACCGGT 2 cut(s) 1272, 1699
PkrI GCNGC 6 cut(s) 7, 844, 1480, 1531, 1747, 2331
PleI GAGTC 4 cut(s) 49, 91, 626, 2301
PpsI GAGTC 4 cut(s) 49, 91, 626, 2301
Ppu21I YACGTR 1 cut(s) 1177
PshBI ATTAAT 1 cut(s) 1962
PsiI TTATAA 1 cut(s) 1737
Psp124BI GAGCTC 1 cut(s) 315
Psp6I CCWGG 5 cut(s) 277, 1006, 1413, 1927, 2229
PspGI CCWGG 5 cut(s) 277, 1006, 1413, 1927, 2229
PspN4I GGNNCC 7 cut(s) 336, 1131, 1243, 1244, 1496, 2007, 2183
PspOMI GGGCCC 1 cut(s) 1241
PspPI GGNCC 3 cut(s) 1241, 1242, 2005
PstNI CAGNNNCTG 1 cut(s) 2255
PsuI RGATCY 6 cut(s) 46, 685, 1051, 1484, 1787, 1819
PsyI GACNNNGTC 1 cut(s) 257
RruI TCGCGA 1 cut(s) 1920
RsaI GTAC 6 cut(s) 359, 563, 988, 1175, 1219, 2225
RsaNI GTAC 6 cut(s) 358, 562, 987, 1174, 1218, 2224
RseI CAYNNNNRTG 2 cut(s) 666, 2090
SacI GAGCTC 1 cut(s) 315
SalI GTCGAC 1 cut(s) 85
SapI GCTCTTC 1 cut(s) 867
SaqAI TTAA 8 cut(s) 380, 804, 810, 1191, 1650, 1962, 2082, 2214
SatI GCNGC 6 cut(s) 6, 843, 1479, 1530, 1746, 2330
Sau96I GGNCC 3 cut(s) 1241, 1242, 2005
ScaI AGTACT 1 cut(s) 988
SchI GAGTC 4 cut(s) 50, 92, 626, 2302
ScrFI CCNGG 6 cut(s) 279, 1008, 1215, 1415, 1929, 2231
SduI GDGCHC 3 cut(s) 315, 1245, 1497
SfaNI GCATC 5 cut(s) 468, 598, 1047, 1669, 1732
SfcI CTRYAG 2 cut(s) 1428, 2256
SgrAI CRCCGGYG 1 cut(s) 1699
SinI GGWCC 1 cut(s) 2005
SmiMI CAYNNNNRTG 2 cut(s) 666, 2090
SmlI CTYRAG 2 cut(s) 1056, 1352
SmoI CTYRAG 2 cut(s) 1056, 1352
SphI GCATGC 1 cut(s) 2356
SsiI CCGC 7 cut(s) 702, 843, 1236, 1295, 1462, 1806, 1955
SspMI CTAG 4 cut(s) 857, 1113, 1434, 1968
SstI GAGCTC 1 cut(s) 315
StyD4I CCNGG 6 cut(s) 277, 1006, 1213, 1413, 1927, 2229
StyI CCWWGG 3 cut(s) 1033, 1252, 1967
TaaI ACNGT 5 cut(s) 695, 1222, 1231, 2089, 2144
TaiI ACGT 3 cut(s) 1179, 1423, 1633
TaqI TCGA 8 cut(s) 86, 94, 309, 352, 384, 516, 1002, 1975
TatI WGTACW 2 cut(s) 986, 2223
TauI GCSGC 1 cut(s) 845
TfiI GAWTC 3 cut(s) 91, 513, 926
Tru1I TTAA 8 cut(s) 380, 804, 810, 1191, 1650, 1962, 2082, 2214
Tru9I TTAA 8 cut(s) 380, 804, 810, 1191, 1650, 1962, 2082, 2214
TscAI CASTG 6 cut(s) 700, 927, 1236, 1267, 2092, 2123
TseFI GTSAC 4 cut(s) 265, 629, 1702, 2092
TseI GCWGC 5 cut(s) 5, 1478, 1529, 1745, 2329
Tsp45I GTSAC 4 cut(s) 265, 629, 1702, 2092
TspGWI ACGGA 1 cut(s) 2321
TspRI CASTG 6 cut(s) 700, 927, 1236, 1267, 2092, 2123
Tth111I GACNNNGTC 1 cut(s) 257
VpaK11BI GGWCC 1 cut(s) 2005
VspI ATTAAT 1 cut(s) 1962
XagI CCTNNNNNAGG 1 cut(s) 1251
XapI RAATTY 3 cut(s) 290, 674, 1607
XceI RCATGY 2 cut(s) 1927, 2356
XcmI CCANNNNNNNNNTGG 1 cut(s) 1259
XmaJI CCTAGG 1 cut(s) 1967
XmiI GTMKAC 5 cut(s) 86, 274, 1224, 1386, 2059
XmnI GAANNNNTTC 1 cut(s) 852
XspI CTAG 4 cut(s) 857, 1113, 1434, 1968
ZrmI AGTACT 1 cut(s) 988
Zsp2I ATGCAT 1 cut(s) 2354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.