AT2G16370

Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
7081763 .. 7084865
3103 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G16370.2

Sequence Viewer

Length: 1560 bp
ATGGCAACAACTACTCTCAATGACAGTGTCACCACTACACTTGCTTCAGAGCCTCAAAGGACTTACCAAGTTGTTGTTGCTGCAACTAAAGAAATGGGTATTGGTAAAGATGGGAAATTGCCATGGAATTTGCCAACAGATCTCAAGTTCTTTAAAGACATTACTTTGACCACTTCAGATTCCTCTAAGAAAAATGCTGTTGTGATGGGTAGAAAGACTTGGGAGTCTATTCCCATTAAGTATAGGCCGCTTTCGGGTCGGCTTAACGTTGTTCTAACTCGTTCTGGTGGGTTTGATATAGCCAACACTGAGAATGTTGTCACTTGTAGTAGTGTAGATTCTGCTCTTGATTTGTTAGCTGCGCCGCCGTATTGTTTATCTATTGAGAGGGTTTTTGTTATAGGAGGTGGTGACATATTGAGGGAAGCATTGAATAGGCCTAGTTGTGATGCTATCCATTTAACTGAGATTGATACAAGTGTTGACTGTGATACGTTTATACCTGCGATTGATACTTCTGTTTATCAGCCTTGGTCTTCATCGTTTCCAGTAACTGAAAATGGACTTCGGTTTTGCTTCACGACTTTTGTCCGTGTAAAGAGTTCTGCTGATGAATCTTCTGATGAAAGCAATGGGTCACAGTCTCTTCAATTTGATGGGAAGAAGTTTTTGTTTCTTCCTAAGATGGTTTTTGATCAGCATGAGGAGTTTCTGTATTTGAATATGGTTGAAGATATTATCTCTAATGGCAATGTGAAGAATGATAGGACCGGGACTGGTACATTATCAAAATTTGGTTGCCAGATGAAATTCAATTTACGCAGAAGTTTTCCACTTCTGACAACAAAGCGAGTTTTCTGGAGAGGTGTTGTTGAGGAACTTCTATGGTTCATAAGCGGTTCAACCAATGCAAAAGTCCTTCAGGAAAAAGGTATCCATATATGGGATGGGAATGCGTCAAGAGAGTATCTCGATGGTATCGGCCTGACAGAGAGAGAGGAAGGCGACCTTGGACCTGTATACGGATTTCAATGGCGACACTTTGGTGCTAAGTACACAGATATGCATGCTGATTATACTGGTCAAGGATTTGATCAACTTGTAGATGTAATTGACAAAATCAAGAACAATCCTGATGATCGGCGTATTATAATGTCAGCTTGGAATCCTTCTGATCTTAAGCTGATGGCACTTCCTCCATGCCATATGTTTGCACAATTTTATGTGGCAGAAGGGGAACTCTCATGTCAAATGTATCAGCGTTCAGCAGATATGGGCCTTGGTGTGCCGTTTAACATTGCTTCTTACTCTCTTCTTACTTGCATGCTGGCTCATGTGTGTGATCTTGTTCCTGGTGATTTTATCCATGTTCTTGGGGATGCTCATGTATACAAAACTCACGTGAGGCCTCTGCAAGAGCAACTTCTGAATCTTCCAAAACCCTTTCCTGTAATGAAGATAAACCCGGAGAAGAAACAAATCGATTCTTTTGTGGCTTCTGACTTTGACCTCACAGGCTATGATCCTCACAAGAAGATAGAAATGAAAATGGCGGTTTAG

Protein Analysis

519

Amino Acids

58.14

Weight (kDa)

5.55

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DHFR_1 PF00186 23 - 198 2.5e-36 Dihydrofolate reductase
Thymidylat_synt PF00303 239 - 408 6.1e-63 Thymidylate synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1151
AasI GACNNNNNNGTC 1 cut(s) 223
Acc36I ACCTGC 1 cut(s) 511
AccI GTMKAC 2 cut(s) 1020, 1389
AciI CCGC 4 cut(s) 248, 365, 897, 1553
AclI AACGTT 1 cut(s) 267
AclWI GGATC 1 cut(s) 1517
AcsI RAATTY 3 cut(s) 127, 791, 809
AcuI CTGAAG 3 cut(s) 30, 159, 905
AcvI CACGTG 1 cut(s) 1402
AfaI GTAC 2 cut(s) 781, 1055
AfiI CCNNNNNNNGG 3 cut(s) 254, 943, 1022
AflII CTTAAG 1 cut(s) 1178
AgsI TTSAA 7 cut(s) 433, 650, 721, 731, 814, 903, 1031
AjnI CCWGG 1 cut(s) 1351
AjuI GAANNNNNNNTTGG 4 cut(s) 84, 116, 993, 1025
AleI CACNNNNGTG 1 cut(s) 1044
AluBI AGCT 3 cut(s) 359, 1160, 1183
AluI AGCT 3 cut(s) 359, 1160, 1183
Alw26I GTCTC 1 cut(s) 648
AlwI GGATC 1 cut(s) 1517
AlwNI CAGNNNCTG 1 cut(s) 554
AoxI GGCC 5 cut(s) 245, 437, 982, 1276, 1406
ApeKI GCWGC 2 cut(s) 80, 359
ApoI RAATTY 3 cut(s) 127, 791, 809
ArsI GACNNNNNNTTYG 2 cut(s) 555, 587
AspLEI GCGC 1 cut(s) 364
AspS9I GGNCC 3 cut(s) 768, 1013, 1276
AsuC2I CCSGG 2 cut(s) 772, 1466
AsuHPI GGTGA 3 cut(s) 22, 422, 1367
AvaII GGWCC 2 cut(s) 768, 1013
BaeI ACNNNNGTAYC 4 cut(s) 465, 498, 504, 537
BbrPI CACGTG 1 cut(s) 1402
BbsI GAAGAC 1 cut(s) 528
BbvI GCAGC 2 cut(s) 67, 346
BccI CCATC 7 cut(s) 104, 199, 650, 679, 941, 968, 1180
BceAI ACGGC 2 cut(s) 352, 1273
BciT130I CCWGG 1 cut(s) 1353
BciVI GTATCC 1 cut(s) 944
BclI TGATCA 2 cut(s) 694, 1093
BcnI CCSGG 2 cut(s) 772, 1466
BcoDI GTCTC 1 cut(s) 648
BfaI CTAG 1 cut(s) 441
BfrI CTTAAG 1 cut(s) 1178
BfuAI ACCTGC 1 cut(s) 511
BfuI GTATCC 1 cut(s) 944
BglII AGATCT 1 cut(s) 139
BisI GCNGC 4 cut(s) 81, 248, 360, 365
BlsI GCNGC 4 cut(s) 82, 249, 361, 366
Bme1390I CCNGG 3 cut(s) 772, 1353, 1466
Bme18I GGWCC 2 cut(s) 768, 1013
BmgT120I GGNCC 3 cut(s) 768, 1013, 1276
BmrFI CCNGG 3 cut(s) 772, 1353, 1466
BmsI GCATC 2 cut(s) 439, 1369
BoxI GACNNNNGTC 1 cut(s) 587
BpiI GAAGAC 1 cut(s) 528
BplI GAGNNNNNCTC 2 cut(s) 954, 986
BpmI CTGGAG 1 cut(s) 880
BpuEI CTTGAG 1 cut(s) 128
BpuMI CCSGG 2 cut(s) 772, 1466
Bsa29I ATCGAT 1 cut(s) 1482
BsaAI YACGTR 1 cut(s) 1402
BsaJI CCNNGG 4 cut(s) 122, 530, 1009, 1279
BsaXI ACNNNNNCTCC 2 cut(s) 698, 728
Bsc4I CCNNNNNNNGG 3 cut(s) 254, 943, 1022
Bse1I ACTGG 3 cut(s) 548, 781, 1084
Bse3DI GCAATG 3 cut(s) 637, 757, 1296
BseBI CCWGG 1 cut(s) 1353
BseCI ATCGAT 1 cut(s) 1482
BseDI CCNNGG 4 cut(s) 122, 530, 1009, 1279
BseGI GGATG 2 cut(s) 952, 1384
BseLI CCNNNNNNNGG 3 cut(s) 254, 943, 1022
BseMI GCAATG 3 cut(s) 637, 757, 1296
BseMII CTCAG 2 cut(s) 300, 456
BseNI ACTGG 3 cut(s) 548, 781, 1084
BseRI GAGGAG 1 cut(s) 719
BseXI GCAGC 2 cut(s) 67, 346
BshFI GGCC 5 cut(s) 247, 439, 984, 1278, 1408
BshVI ATCGAT 1 cut(s) 1482
BsiSI CCGG 2 cut(s) 771, 1466
BslFI GGGAC 1 cut(s) 787
BslI CCNNNNNNNGG 3 cut(s) 254, 943, 1022
BsmAI GTCTC 1 cut(s) 648
BsmFI GGGAC 1 cut(s) 787
BsmI GAATGC 1 cut(s) 958
BsnI GGCC 5 cut(s) 247, 439, 984, 1278, 1408
Bsp143I GATC 7 cut(s) 139, 694, 1093, 1138, 1174, 1342, 1522
Bsp19I CCATGG 1 cut(s) 122
BspACI CCGC 4 cut(s) 248, 365, 897, 1553
BspANI GGCC 5 cut(s) 247, 439, 984, 1278, 1408
BspCNI CTCAG 2 cut(s) 301, 457
BspDI ATCGAT 1 cut(s) 1482
BspMI ACCTGC 1 cut(s) 511
BspPI GGATC 1 cut(s) 1517
BspTI CTTAAG 1 cut(s) 1178
BsrDI GCAATG 3 cut(s) 637, 757, 1296
BsrI ACTGG 3 cut(s) 548, 781, 1084
BssECI CCNNGG 4 cut(s) 122, 530, 1009, 1279
BssMI GATC 7 cut(s) 139, 694, 1093, 1138, 1174, 1342, 1522
BssNAI GTATAC 2 cut(s) 1021, 1390
BssT1I CCWWGG 4 cut(s) 122, 530, 1009, 1279
Bst1107I GTATAC 2 cut(s) 1021, 1390
Bst2UI CCWGG 1 cut(s) 1353
Bst4CI ACNGT 3 cut(s) 26, 488, 642
Bst6I CTCTTC 2 cut(s) 651, 1317
BstAFI CTTAAG 1 cut(s) 1178
BstBAI YACGTR 1 cut(s) 1402
BstC8I GCNNGC 3 cut(s) 1068, 1325, 1329
BstDEI CTNAG 5 cut(s) 186, 309, 465, 681, 1050
BstDSI CCRYGG 1 cut(s) 122
BstF5I GGATG 2 cut(s) 952, 1384
BstHHI GCGC 1 cut(s) 364
BstKTI GATC 7 cut(s) 142, 697, 1096, 1141, 1177, 1345, 1525
BstMAI GTCTC 1 cut(s) 648
BstMBI GATC 7 cut(s) 139, 694, 1093, 1138, 1174, 1342, 1522
BstNI CCWGG 1 cut(s) 1353
BstNSI RCATGY 2 cut(s) 1070, 1327
BstPAI GACNNNNGTC 1 cut(s) 587
BstSCI CCNGG 3 cut(s) 770, 1351, 1464
BstV1I GCAGC 2 cut(s) 67, 346
BstV2I GAAGAC 1 cut(s) 528
BstX2I RGATCY 1 cut(s) 139
BstXI CCANNNNNNTGG 1 cut(s) 1373
BstYI RGATCY 1 cut(s) 139
BstZ17I GTATAC 2 cut(s) 1021, 1390
Bsu15I ATCGAT 1 cut(s) 1482
BsuI GTATCC 1 cut(s) 944
BsuRI GGCC 5 cut(s) 247, 439, 984, 1278, 1408
BsuTUI ATCGAT 1 cut(s) 1482
BtgI CCRYGG 1 cut(s) 122
BtsCI GGATG 2 cut(s) 952, 1384
BtsIMutI CAGTG 2 cut(s) 31, 306
BveI ACCTGC 1 cut(s) 511
Cac8I GCNNGC 3 cut(s) 1068, 1325, 1329
CaiI CAGNNNCTG 1 cut(s) 554
CfoI GCGC 1 cut(s) 364
Cfr13I GGNCC 3 cut(s) 768, 1013, 1276
ClaI ATCGAT 1 cut(s) 1482
CseI GACGC 1 cut(s) 945
Csp6I GTAC 2 cut(s) 780, 1054
CspCI CAANNNNNGTGG 2 cut(s) 22, 57
CviAII CATG 9 cut(s) 123, 701, 1067, 1200, 1245, 1324, 1334, 1367, 1385
CviQI GTAC 2 cut(s) 780, 1054
DdeI CTNAG 5 cut(s) 186, 309, 465, 681, 1050
DpnI GATC 7 cut(s) 141, 696, 1095, 1140, 1176, 1344, 1524
DpnII GATC 7 cut(s) 139, 694, 1093, 1138, 1174, 1342, 1522
DraI TTTAAA 1 cut(s) 154
DrdI GACNNNNNNGTC 1 cut(s) 223
DseDI GACNNNNNNGTC 1 cut(s) 223
Eam1104I CTCTTC 2 cut(s) 651, 1317
EarI CTCTTC 2 cut(s) 651, 1317
Eco130I CCWWGG 4 cut(s) 122, 530, 1009, 1279
Eco147I AGGCCT 2 cut(s) 439, 1408
Eco47I GGWCC 2 cut(s) 768, 1013
Eco57I CTGAAG 3 cut(s) 30, 159, 905
Eco72I CACGTG 1 cut(s) 1402
EcoRII CCWGG 1 cut(s) 1351
EcoT14I CCWWGG 4 cut(s) 122, 530, 1009, 1279
EcoT22I ATGCAT 1 cut(s) 1068
ErhI CCWWGG 4 cut(s) 122, 530, 1009, 1279
FaeI CATG 9 cut(s) 126, 704, 1070, 1203, 1248, 1327, 1337, 1370, 1388
FalI AAGNNNNNCTT 4 cut(s) 993, 1025, 1407, 1439
FaqI GGGAC 1 cut(s) 787
FatI CATG 9 cut(s) 122, 700, 1066, 1199, 1244, 1323, 1333, 1366, 1384
FauNDI CATATG 1 cut(s) 1206
FbaI TGATCA 2 cut(s) 694, 1093
FblI GTMKAC 2 cut(s) 1020, 1389
Fnu4HI GCNGC 4 cut(s) 81, 248, 360, 365
FokI GGATG 2 cut(s) 959, 1391
Fsp4HI GCNGC 4 cut(s) 81, 248, 360, 365
FspBI CTAG 1 cut(s) 441
GlaI GCGC 1 cut(s) 363
GluI GCNGC 4 cut(s) 81, 248, 360, 365
GsuI CTGGAG 1 cut(s) 880
HaeIII GGCC 5 cut(s) 247, 439, 984, 1278, 1408
HapII CCGG 2 cut(s) 771, 1466
HgaI GACGC 1 cut(s) 945
HhaI GCGC 1 cut(s) 364
Hin1II CATG 9 cut(s) 126, 704, 1070, 1203, 1248, 1327, 1337, 1370, 1388
Hin6I GCGC 1 cut(s) 362
HinP1I GCGC 1 cut(s) 362
HincII GTYRAC 1 cut(s) 484
HindII GTYRAC 1 cut(s) 484
HinfI GANTC 7 cut(s) 179, 224, 338, 614, 1165, 1429, 1484
HpaII CCGG 2 cut(s) 771, 1466
HphI GGTGA 3 cut(s) 22, 422, 1367
Hpy166II GTNNAC 4 cut(s) 484, 1021, 1056, 1390
Hpy188I TCNGA 7 cut(s) 49, 178, 622, 840, 1174, 1428, 1501
Hpy188III TCNNGA 8 cut(s) 347, 580, 859, 923, 960, 971, 1123, 1133
Hpy8I GTNNAC 4 cut(s) 484, 1021, 1056, 1390
HpyAV CCTTC 4 cut(s) 929, 995, 1179, 1226
HpyCH4III ACNGT 3 cut(s) 26, 488, 642
HpyCH4IV ACGT 3 cut(s) 267, 494, 1401
HpyCH4V TGCA 6 cut(s) 83, 911, 1066, 1214, 1323, 1414
HpyF3I CTNAG 5 cut(s) 186, 309, 465, 681, 1050
HpySE526I ACGT 3 cut(s) 267, 494, 1401
Hsp92II CATG 9 cut(s) 126, 704, 1070, 1203, 1248, 1327, 1337, 1370, 1388
HspAI GCGC 1 cut(s) 362
Ksp22I TGATCA 2 cut(s) 694, 1093
Kzo9I GATC 7 cut(s) 139, 694, 1093, 1138, 1174, 1342, 1522
Lsp1109I GCAGC 2 cut(s) 67, 346
LweI GCATC 2 cut(s) 439, 1369
MaeI CTAG 1 cut(s) 441
MaeII ACGT 3 cut(s) 267, 494, 1401
MaeIII GTNAC 5 cut(s) 28, 319, 410, 550, 636
MalI GATC 7 cut(s) 141, 696, 1095, 1140, 1176, 1344, 1524
MboI GATC 7 cut(s) 139, 694, 1093, 1138, 1174, 1342, 1522
MflI RGATCY 1 cut(s) 139
MluCI AATT 8 cut(s) 116, 127, 650, 791, 809, 814, 1110, 1217
MlyI GAGTC 1 cut(s) 233
Mph1103I ATGCAT 1 cut(s) 1068
MseI TTAA 6 cut(s) 153, 237, 264, 461, 1179, 1293
MslI CAYNNNNRTG 3 cut(s) 1044, 1061, 1338
MspCI CTTAAG 1 cut(s) 1178
MspI CCGG 2 cut(s) 771, 1466
MspR9I CCNGG 3 cut(s) 772, 1353, 1466
Mva1269I GAATGC 1 cut(s) 958
MvaI CCWGG 1 cut(s) 1353
NciI CCSGG 2 cut(s) 772, 1466
NcoI CCATGG 1 cut(s) 122
NdeI CATATG 1 cut(s) 1206
NdeII GATC 7 cut(s) 139, 694, 1093, 1138, 1174, 1342, 1522
NlaIII CATG 9 cut(s) 126, 704, 1070, 1203, 1248, 1327, 1337, 1370, 1388
NmuCI GTSAC 4 cut(s) 28, 319, 410, 636
NsiI ATGCAT 1 cut(s) 1068
NspI RCATGY 2 cut(s) 1070, 1327
OliI CACNNNNGTG 1 cut(s) 1044
PaeI GCATGC 2 cut(s) 1070, 1327
PceI AGGCCT 2 cut(s) 439, 1408
PctI GAATGC 1 cut(s) 958
PfeI GAWTC 6 cut(s) 179, 338, 614, 1165, 1429, 1484
PflFI GACNNNGTC 1 cut(s) 26
PkrI GCNGC 4 cut(s) 82, 249, 361, 366
PleI GAGTC 1 cut(s) 232
PmaCI CACGTG 1 cut(s) 1402
PmlI CACGTG 1 cut(s) 1402
PpsI GAGTC 1 cut(s) 232
Ppu21I YACGTR 1 cut(s) 1402
PshAI GACNNNNGTC 1 cut(s) 587
PsiI TTATAA 1 cut(s) 1151
Psp1406I AACGTT 1 cut(s) 267
Psp6I CCWGG 1 cut(s) 1351
PspCI CACGTG 1 cut(s) 1402
PspGI CCWGG 1 cut(s) 1351
PspPI GGNCC 3 cut(s) 768, 1013, 1276
PstNI CAGNNNCTG 1 cut(s) 554
PsuI RGATCY 1 cut(s) 139
PsyI GACNNNGTC 1 cut(s) 26
RsaI GTAC 2 cut(s) 781, 1055
RsaNI GTAC 2 cut(s) 780, 1054
RseI CAYNNNNRTG 3 cut(s) 1044, 1061, 1338
SaqAI TTAA 6 cut(s) 153, 237, 264, 461, 1179, 1293
SatI GCNGC 4 cut(s) 81, 248, 360, 365
Sau3AI GATC 7 cut(s) 139, 694, 1093, 1138, 1174, 1342, 1522
Sau96I GGNCC 3 cut(s) 768, 1013, 1276
SchI GAGTC 1 cut(s) 233
ScrFI CCNGG 3 cut(s) 772, 1353, 1466
SfaNI GCATC 2 cut(s) 439, 1369
SinI GGWCC 2 cut(s) 768, 1013
SmiMI CAYNNNNRTG 3 cut(s) 1044, 1061, 1338
SmlI CTYRAG 2 cut(s) 143, 1178
SmoI CTYRAG 2 cut(s) 143, 1178
SphI GCATGC 2 cut(s) 1070, 1327
Sse9I AATT 8 cut(s) 116, 127, 650, 791, 809, 814, 1110, 1217
SseBI AGGCCT 2 cut(s) 439, 1408
SsiI CCGC 4 cut(s) 248, 365, 897, 1553
SspMI CTAG 1 cut(s) 441
StuI AGGCCT 2 cut(s) 439, 1408
StyD4I CCNGG 3 cut(s) 770, 1351, 1464
StyI CCWWGG 4 cut(s) 122, 530, 1009, 1279
TaaI ACNGT 3 cut(s) 26, 488, 642
TaiI ACGT 3 cut(s) 270, 497, 1404
TaqI TCGA 2 cut(s) 972, 1482
TasI AATT 8 cut(s) 116, 127, 650, 791, 809, 814, 1110, 1217
TatI WGTACW 1 cut(s) 1053
TauI GCSGC 2 cut(s) 250, 367
TfiI GAWTC 6 cut(s) 179, 338, 614, 1165, 1429, 1484
Tru1I TTAA 6 cut(s) 153, 237, 264, 461, 1179, 1293
Tru9I TTAA 6 cut(s) 153, 237, 264, 461, 1179, 1293
TscAI CASTG 2 cut(s) 31, 313
TseFI GTSAC 4 cut(s) 28, 319, 410, 636
TseI GCWGC 2 cut(s) 80, 359
Tsp45I GTSAC 4 cut(s) 28, 319, 410, 636
TspDTI ATGAA 7 cut(s) 528, 627, 639, 821, 880, 1469, 1559
TspGWI ACGGA 2 cut(s) 581, 1038
TspRI CASTG 2 cut(s) 31, 313
Tth111I GACNNNGTC 1 cut(s) 26
Vha464I CTTAAG 1 cut(s) 1178
VpaK11BI GGWCC 2 cut(s) 768, 1013
XapI RAATTY 3 cut(s) 127, 791, 809
XceI RCATGY 2 cut(s) 1070, 1327
XcmI CCANNNNNNNNNTGG 1 cut(s) 944
XmiI GTMKAC 2 cut(s) 1020, 1389
XspI CTAG 1 cut(s) 441
Zsp2I ATGCAT 1 cut(s) 1068
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.