AT4G34570

Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
16510933 .. 16514372
3440 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G34570.3

Sequence Viewer

Length: 1698 bp
ATGAGGTGTTTGCAAAACTCCGCAAAGACTCTACCTTTAGCGTTTAAATCGGCATTGCTGCCTTTGTCTCAAAGGTGGTTCTGTAAATTTTCTCCTAAGCCATCCTCATTGACAAACATTTTCAAGGTTTCAATTTCAACCATGGCAAACACTCTCAATGGAAATGTGATCATGACTTCAAAGCCTCAGAGTACTTACCAAGTTGTGGTAGCTGCAACCAAGGAAATGGGTATTGGTAAAGACGGAAAACTTCCATGGAATTTGCCTACCGATCTCAAGTTCTTCAAGGATTTAACTTTGTCCACTTCGGATTCTGCTAAGAAGAACGCTGTTGTTATGGGTAGGAAAACGTGGGAGTCTATTCCCAAAAAGTATAGGCCACTCTCTGGTCGCCTGAATGTTGTCTTGTCTCGTTCTAGCGGTTTCGATATAGCCAACACTGAAAATGTTGTAACTTGCAGTAGCATAGATTCTGCTCTAGACTTATTAGCTGCACCTCCGTTTAGTCTGTCCATTGAGAAAGTGTTTGTAATAGGAGGTGGCGACATATTGAGGGAAGCTTTGAATAAACCGAGCTGTGAAGCCATCCACATAACTGAGATTGATACAAGTATCGACTGTGATACATTTATTCCCACGGTTGACACTTCTGCATATCAGCCTTGGTGTTCGTCGTTTCCAATATGTGAAAATGGTCTTCGATTTTCCTTCACGACTCATGTTCGTGTAAAGAGTTCTTCTGCCGGTGAAGCCTCTGATGAGAGTGATGGGTCAAAGGTTCTTCAAGTTGATTGGAAGAAGTTTTCTTCTGTTCTTCCTAAAATGATTTTTGACCGGCATGAGGAATATCTCTACTTAAATCTGGTCAAAGAGATAATCTCAAATGGAAACTTAAAAGACGATAGGACAGGGACTGGTACATTATCTAAATTTGGTTGTCAGATGAAATTCAATTTACGCAGGAATTTTCCACTTCTGACGACAAAGAGAGTTTTCTGGAGAGGTGTTGTTGAGGAACTTCTATGGTTCATAAGCGGTTCAACCAATGCAAAGGTACTTCAAGAAAAGGGTATCCGTATATGGGATGGGAATGCGTCGAGAGCATATCTTGATGGTATTGGACTGACTGAGAGAGAGGAAGGTGACCTTGGACCCGTTTATGGATTTCAGTGGAGACACTTTGGTGCTAAGTACACAGATATGCATGCTGATTATACTGGCCAAGGATTTGATCAGCTCTTAGATGTAATTAACAAGATCAAGAACAATCCTGATGATCGACGGATTATAATGTCAGCTTGGAATCCTTCTGATCTTAAGCTGATGGCACTTCCTCCATGCCACATGTTTGCACAGTTTTATGTTGCAAATGGAGAACTTTCATGTCAAATGTATCAGCGTTCAGCCGATATGGGTCTCGGCGTACCGTTTAACATTGCCTCATACTCCCTTCTTACATGCATTCTTGCTCACGTCTGCGATCTTGTTCCTGGTGATTTTATCCATGTGATTGGAGATGCTCATGTTTACAAAAACCATGTCAGGCCTCTGCAAGAGCAACTTGAGAACCCACCAAAACCTTTTCCTGTTTTGAAGATAAATCCAGAGAAGAAAGATATAGATTCTTTTGTTGCGGATGACTTTGAGCTCATTGGCTATGATCCTCACAAGAAAATAGATATGAAAATGGCTGTTTAG

Protein Analysis

565

Amino Acids

63.21

Weight (kDa)

8.13

Isoelectric Point (pI)

41.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DHFR_1 PF00186 20 - 190 5.3e-35 Dihydrofolate reductase
Thymidylat_synt PF00303 238 - 518 3e-116 Thymidylate synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1289
AccB7I CCANNNNNTGG 2 cut(s) 205, 386
AciI CCGC 4 cut(s) 21, 420, 1035, 1634
AclWI GGATC 1 cut(s) 1655
AcoI YGGCCR 1 cut(s) 1219
AcsI RAATTY 5 cut(s) 86, 259, 929, 947, 964
AfaI GTAC 5 cut(s) 193, 919, 1056, 1193, 1425
AfiI CCNNNNNNNGG 5 cut(s) 205, 386, 841, 1081, 1160
AflII CTTAAG 1 cut(s) 1316
AflIII ACRYGT 1 cut(s) 1344
AjiI CACGTC 1 cut(s) 1474
AjnI CCWGG 1 cut(s) 1489
AjuI GAANNNNNNNTTGG 4 cut(s) 216, 248, 1131, 1163
AleI CACNNNNGTG 1 cut(s) 1182
AluBI AGCT 8 cut(s) 212, 491, 560, 576, 1237, 1298, 1321, 1648
AluI AGCT 8 cut(s) 212, 491, 560, 576, 1237, 1298, 1321, 1648
Alw21I GWGCWC 1 cut(s) 1650
Alw26I GTCTC 4 cut(s) 72, 414, 1168, 1421
AlwI GGATC 1 cut(s) 1655
AlwNI CAGNNNCTG 1 cut(s) 914
AoxI GGCC 3 cut(s) 377, 1219, 1544
ApeKI GCWGC 3 cut(s) 58, 212, 491
ApoI RAATTY 5 cut(s) 86, 259, 929, 947, 964
ArsI GACNNNNNNTTYG 2 cut(s) 1524, 1556
AspS9I GGNCC 1 cut(s) 1151
AsuHPI GGTGA 3 cut(s) 758, 1154, 1505
AvaII GGWCC 1 cut(s) 1151
BalI TGGCCA 1 cut(s) 1221
BanII GRGCYC 1 cut(s) 1650
BbsI GAAGAC 1 cut(s) 689
Bbv12I GWGCWC 1 cut(s) 1650
BbvI GCAGC 3 cut(s) 45, 199, 478
BccI CCATC 6 cut(s) 109, 593, 761, 1079, 1106, 1318
BciT130I CCWGG 1 cut(s) 1491
BciVI GTATCC 1 cut(s) 1082
BclI TGATCA 2 cut(s) 168, 1231
BcoDI GTCTC 4 cut(s) 72, 414, 1168, 1421
BfaI CTAG 2 cut(s) 417, 479
BfrI CTTAAG 1 cut(s) 1316
BfuI GTATCC 1 cut(s) 1082
BisI GCNGC 3 cut(s) 59, 213, 492
BlsI GCNGC 3 cut(s) 60, 214, 493
BmcAI AGTACT 1 cut(s) 193
Bme1390I CCNGG 1 cut(s) 1491
Bme18I GGWCC 1 cut(s) 1151
BmgBI CACGTC 1 cut(s) 1474
BmgT120I GGNCC 1 cut(s) 1151
BmiI GGNNCC 1 cut(s) 1153
BmrFI CCNGG 1 cut(s) 1491
BmsI GCATC 1 cut(s) 1507
BpiI GAAGAC 1 cut(s) 689
BplI GAGNNNNNCTC 2 cut(s) 863, 895
BpmI CTGGAG 1 cut(s) 1018
Bpu10I CCTNAGC 1 cut(s) 96
BpuEI CTTGAG 2 cut(s) 260, 1583
BsaI GGTCTC 1 cut(s) 1421
BsaJI CCNNGG 7 cut(s) 141, 219, 254, 636, 662, 1147, 1222
Bsc4I CCNNNNNNNGG 5 cut(s) 205, 386, 841, 1081, 1160
Bse118I RCCGGY 2 cut(s) 743, 834
Bse1I ACTGG 2 cut(s) 919, 1222
Bse3DI GCAATG 2 cut(s) 53, 1434
BseBI CCWGG 1 cut(s) 1491
BseDI CCNNGG 7 cut(s) 141, 219, 254, 636, 662, 1147, 1222
BseGI GGATG 4 cut(s) 101, 585, 1090, 1642
BseLI CCNNNNNNNGG 5 cut(s) 205, 386, 841, 1081, 1160
BseMI GCAATG 2 cut(s) 53, 1434
BseMII CTCAG 3 cut(s) 200, 588, 1119
BseNI ACTGG 2 cut(s) 919, 1222
BseXI GCAGC 3 cut(s) 45, 199, 478
BsgI GTGCAG 1 cut(s) 477
BshFI GGCC 3 cut(s) 379, 1221, 1546
BsiHKAI GWGCWC 1 cut(s) 1650
BsiSI CCGG 2 cut(s) 744, 835
BslFI GGGAC 1 cut(s) 925
BslI CCNNNNNNNGG 5 cut(s) 205, 386, 841, 1081, 1160
BsmAI GTCTC 4 cut(s) 72, 414, 1168, 1421
BsmFI GGGAC 1 cut(s) 925
BsmI GAATGC 2 cut(s) 1096, 1461
BsnI GGCC 3 cut(s) 379, 1221, 1546
Bso31I GGTCTC 1 cut(s) 1421
Bsp1286I GDGCHC 1 cut(s) 1650
Bsp143I GATC 8 cut(s) 168, 271, 1231, 1257, 1276, 1312, 1480, 1660
Bsp19I CCATGG 2 cut(s) 141, 254
BspACI CCGC 4 cut(s) 21, 420, 1035, 1634
BspANI GGCC 3 cut(s) 379, 1221, 1546
BspCNI CTCAG 3 cut(s) 199, 589, 1120
BspHI TCATGA 1 cut(s) 171
BspLI GGNNCC 1 cut(s) 1153
BspPI GGATC 1 cut(s) 1655
BspTI CTTAAG 1 cut(s) 1316
BspTNI GGTCTC 1 cut(s) 1421
BsrDI GCAATG 2 cut(s) 53, 1434
BsrFI RCCGGY 2 cut(s) 743, 834
BsrI ACTGG 2 cut(s) 919, 1222
BssAI RCCGGY 2 cut(s) 743, 834
BssECI CCNNGG 7 cut(s) 141, 219, 254, 636, 662, 1147, 1222
BssMI GATC 8 cut(s) 168, 271, 1231, 1257, 1276, 1312, 1480, 1660
BssT1I CCWWGG 6 cut(s) 141, 219, 254, 662, 1147, 1222
Bst2UI CCWGG 1 cut(s) 1491
Bst4CI ACNGT 4 cut(s) 620, 640, 1356, 1428
BstAFI CTTAAG 1 cut(s) 1316
BstC8I GCNNGC 1 cut(s) 1206
BstDEI CTNAG 7 cut(s) 96, 186, 318, 597, 1128, 1188, 1240
BstDSI CCRYGG 3 cut(s) 141, 254, 636
BstEII GGTNACC 1 cut(s) 1142
BstF5I GGATG 4 cut(s) 101, 585, 1090, 1642
BstKTI GATC 8 cut(s) 171, 274, 1234, 1260, 1279, 1315, 1483, 1663
BstMAI GTCTC 4 cut(s) 72, 414, 1168, 1421
BstMBI GATC 8 cut(s) 168, 271, 1231, 1257, 1276, 1312, 1480, 1660
BstMWI GCNNNNNNNGC 2 cut(s) 749, 1100
BstNI CCWGG 1 cut(s) 1491
BstNSI RCATGY 3 cut(s) 1208, 1348, 1461
BstPI GGTNACC 1 cut(s) 1142
BstSCI CCNGG 1 cut(s) 1489
BstV1I GCAGC 3 cut(s) 45, 199, 478
BstV2I GAAGAC 1 cut(s) 689
BstXI CCANNNNNNTGG 2 cut(s) 226, 1511
BsuI GTATCC 1 cut(s) 1082
BsuRI GGCC 3 cut(s) 379, 1221, 1546
BtgI CCRYGG 3 cut(s) 141, 254, 636
BtrI CACGTC 1 cut(s) 1474
BtsCI GGATG 4 cut(s) 101, 585, 1090, 1642
BtsIMutI CAGTG 2 cut(s) 438, 1175
Cac8I GCNNGC 1 cut(s) 1206
CaiI CAGNNNCTG 1 cut(s) 914
CciI TCATGA 1 cut(s) 171
Cfr10I RCCGGY 2 cut(s) 743, 834
Cfr13I GGNCC 1 cut(s) 1151
CseI GACGC 1 cut(s) 1083
Csp6I GTAC 5 cut(s) 192, 918, 1055, 1192, 1424
CviQI GTAC 5 cut(s) 192, 918, 1055, 1192, 1424
DdeI CTNAG 7 cut(s) 96, 186, 318, 597, 1128, 1188, 1240
DpnI GATC 8 cut(s) 170, 273, 1233, 1259, 1278, 1314, 1482, 1662
DpnII GATC 8 cut(s) 168, 271, 1231, 1257, 1276, 1312, 1480, 1660
DraI TTTAAA 1 cut(s) 46
EaeI YGGCCR 1 cut(s) 1219
Ecl136II GAGCTC 1 cut(s) 1648
Eco130I CCWWGG 6 cut(s) 141, 219, 254, 662, 1147, 1222
Eco147I AGGCCT 1 cut(s) 1546
Eco24I GRGCYC 1 cut(s) 1650
Eco31I GGTCTC 1 cut(s) 1421
Eco47I GGWCC 1 cut(s) 1151
Eco53kI GAGCTC 1 cut(s) 1648
Eco91I GGTNACC 1 cut(s) 1142
EcoICRI GAGCTC 1 cut(s) 1648
EcoO65I GGTNACC 1 cut(s) 1142
EcoRII CCWGG 1 cut(s) 1489
EcoT14I CCWWGG 6 cut(s) 141, 219, 254, 662, 1147, 1222
EcoT22I ATGCAT 2 cut(s) 1206, 1463
EcoT38I GRGCYC 1 cut(s) 1650
ErhI CCWWGG 6 cut(s) 141, 219, 254, 662, 1147, 1222
FalI AAGNNNNNCTT 4 cut(s) 1131, 1163, 1545, 1577
FaqI GGGAC 1 cut(s) 925
FbaI TGATCA 2 cut(s) 168, 1231
Fnu4HI GCNGC 3 cut(s) 59, 213, 492
FokI GGATG 4 cut(s) 88, 572, 1097, 1649
FriOI GRGCYC 1 cut(s) 1650
Fsp4HI GCNGC 3 cut(s) 59, 213, 492
FspBI CTAG 2 cut(s) 417, 479
GluI GCNGC 3 cut(s) 59, 213, 492
GsuI CTGGAG 1 cut(s) 1018
HaeIII GGCC 3 cut(s) 379, 1221, 1546
HapII CCGG 2 cut(s) 744, 835
HgaI GACGC 1 cut(s) 1083
HincII GTYRAC 1 cut(s) 643
HindII GTYRAC 1 cut(s) 643
HindIII AAGCTT 1 cut(s) 558
HinfI GANTC 7 cut(s) 28, 311, 356, 470, 715, 1303, 1622
HpaII CCGG 2 cut(s) 744, 835
HphI GGTGA 3 cut(s) 758, 1154, 1505
Hpy166II GTNNAC 4 cut(s) 303, 643, 1194, 1528
Hpy188I TCNGA 6 cut(s) 189, 310, 757, 942, 978, 1312
Hpy8I GTNNAC 4 cut(s) 303, 643, 1194, 1528
Hpy99I CGWCG 3 cut(s) 676, 1099, 1284
HpyAV CCTTC 4 cut(s) 718, 1133, 1317, 1460
HpyCH4III ACNGT 4 cut(s) 620, 640, 1356, 1428
HpyCH4IV ACGT 2 cut(s) 350, 1473
HpyF10VI GCNNNNNNNGC 2 cut(s) 749, 1100
HpyF3I CTNAG 7 cut(s) 96, 186, 318, 597, 1128, 1188, 1240
HpySE526I ACGT 2 cut(s) 350, 1473
Ksp22I TGATCA 2 cut(s) 168, 1231
Kzo9I GATC 8 cut(s) 168, 271, 1231, 1257, 1276, 1312, 1480, 1660
Lsp1109I GCAGC 3 cut(s) 45, 199, 478
LweI GCATC 1 cut(s) 1507
MaeI CTAG 2 cut(s) 417, 479
MaeII ACGT 2 cut(s) 350, 1473
MaeIII GTNAC 2 cut(s) 451, 1142
MalI GATC 8 cut(s) 170, 273, 1233, 1259, 1278, 1314, 1482, 1662
MboI GATC 8 cut(s) 168, 271, 1231, 1257, 1276, 1312, 1480, 1660
MhlI GDGCHC 1 cut(s) 1650
MlsI TGGCCA 1 cut(s) 1221
MluCI AATT 8 cut(s) 86, 132, 259, 929, 947, 952, 964, 1248
MluNI TGGCCA 1 cut(s) 1221
MlyI GAGTC 3 cut(s) 22, 365, 709
Mox20I TGGCCA 1 cut(s) 1221
Mph1103I ATGCAT 2 cut(s) 1206, 1463
MscI TGGCCA 1 cut(s) 1221
MseI TTAA 7 cut(s) 45, 293, 857, 893, 1251, 1317, 1431
MslI CAYNNNNRTG 3 cut(s) 723, 1182, 1199
Msp20I TGGCCA 1 cut(s) 1221
MspCI CTTAAG 1 cut(s) 1316
MspI CCGG 2 cut(s) 744, 835
MspR9I CCNGG 1 cut(s) 1491
Mva1269I GAATGC 2 cut(s) 1096, 1461
MvaI CCWGG 1 cut(s) 1491
MwoI GCNNNNNNNGC 2 cut(s) 749, 1100
NcoI CCATGG 2 cut(s) 141, 254
NdeII GATC 8 cut(s) 168, 271, 1231, 1257, 1276, 1312, 1480, 1660
NlaIV GGNNCC 1 cut(s) 1153
NmeAIII GCCGAG 1 cut(s) 1398
NmuCI GTSAC 1 cut(s) 1142
NsiI ATGCAT 2 cut(s) 1206, 1463
NspI RCATGY 3 cut(s) 1208, 1348, 1461
OliI CACNNNNGTG 1 cut(s) 1182
PaeI GCATGC 1 cut(s) 1208
PagI TCATGA 1 cut(s) 171
PceI AGGCCT 1 cut(s) 1546
PciI ACATGT 1 cut(s) 1344
PctI GAATGC 2 cut(s) 1096, 1461
PfeI GAWTC 4 cut(s) 311, 470, 1303, 1622
PflMI CCANNNNNTGG 2 cut(s) 205, 386
PkrI GCNGC 3 cut(s) 60, 214, 493
PleI GAGTC 3 cut(s) 22, 364, 709
PpsI GAGTC 3 cut(s) 22, 364, 709
PscI ACATGT 1 cut(s) 1344
PsiI TTATAA 1 cut(s) 1289
Psp124BI GAGCTC 1 cut(s) 1650
Psp6I CCWGG 1 cut(s) 1489
PspEI GGTNACC 1 cut(s) 1142
PspGI CCWGG 1 cut(s) 1489
PspN4I GGNNCC 1 cut(s) 1153
PspPI GGNCC 1 cut(s) 1151
PstNI CAGNNNCTG 1 cut(s) 914
RsaI GTAC 5 cut(s) 193, 919, 1056, 1193, 1425
RsaNI GTAC 5 cut(s) 192, 918, 1055, 1192, 1424
RseI CAYNNNNRTG 3 cut(s) 723, 1182, 1199
SacI GAGCTC 1 cut(s) 1650
SaqAI TTAA 7 cut(s) 45, 293, 857, 893, 1251, 1317, 1431
SatI GCNGC 3 cut(s) 59, 213, 492
Sau3AI GATC 8 cut(s) 168, 271, 1231, 1257, 1276, 1312, 1480, 1660
Sau96I GGNCC 1 cut(s) 1151
ScaI AGTACT 1 cut(s) 193
SchI GAGTC 3 cut(s) 22, 365, 709
ScrFI CCNGG 1 cut(s) 1491
SduI GDGCHC 1 cut(s) 1650
SfaNI GCATC 1 cut(s) 1507
SinI GGWCC 1 cut(s) 1151
SmiMI CAYNNNNRTG 3 cut(s) 723, 1182, 1199
SmlI CTYRAG 3 cut(s) 275, 1316, 1562
SmoI CTYRAG 3 cut(s) 275, 1316, 1562
SphI GCATGC 1 cut(s) 1208
Sse9I AATT 8 cut(s) 86, 132, 259, 929, 947, 952, 964, 1248
SseBI AGGCCT 1 cut(s) 1546
SsiI CCGC 4 cut(s) 21, 420, 1035, 1634
SspMI CTAG 2 cut(s) 417, 479
SstI GAGCTC 1 cut(s) 1650
StuI AGGCCT 1 cut(s) 1546
StyD4I CCNGG 1 cut(s) 1489
StyI CCWWGG 6 cut(s) 141, 219, 254, 662, 1147, 1222
TaaI ACNGT 4 cut(s) 620, 640, 1356, 1428
TaiI ACGT 2 cut(s) 353, 1476
TaqI TCGA 5 cut(s) 426, 615, 700, 1097, 1279
TasI AATT 8 cut(s) 86, 132, 259, 929, 947, 952, 964, 1248
TatI WGTACW 2 cut(s) 191, 1191
TfiI GAWTC 4 cut(s) 311, 470, 1303, 1622
Tru1I TTAA 7 cut(s) 45, 293, 857, 893, 1251, 1317, 1431
Tru9I TTAA 7 cut(s) 45, 293, 857, 893, 1251, 1317, 1431
TscAI CASTG 2 cut(s) 445, 1175
TseFI GTSAC 1 cut(s) 1142
TseI GCWGC 3 cut(s) 58, 212, 491
Tsp45I GTSAC 1 cut(s) 1142
TspDTI ATGAA 4 cut(s) 959, 1018, 1371, 1697
TspGWI ACGGA 4 cut(s) 258, 489, 1064, 1297
TspRI CASTG 2 cut(s) 445, 1175
Van91I CCANNNNNTGG 2 cut(s) 205, 386
Vha464I CTTAAG 1 cut(s) 1316
VpaK11BI GGWCC 1 cut(s) 1151
XapI RAATTY 5 cut(s) 86, 259, 929, 947, 964
XbaI TCTAGA 1 cut(s) 478
XceI RCATGY 3 cut(s) 1208, 1348, 1461
XspI CTAG 2 cut(s) 417, 479
ZrmI AGTACT 1 cut(s) 193
Zsp2I ATGCAT 2 cut(s) 1206, 1463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.