pycom05g05470

Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
6554573 .. 6555077
505 bp
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UTR
Exon/CDS
Intron
pycom05g05470.3

Sequence Viewer

Length: 243 bp
ATGCATGATTGCTCATGTTTGTGCCAATTTGTTCCTGGTGATTTCATTCATGTCTTAGGGGATGCTCATGTTTACCGCACTCACATCAGGCCTTTGCAGGAGCAGCTTGAAAAACTGCCCAAGCCTTTTCCAATTTTGAAGATCAATCCTGAGAAAAAGAATATAGATTCTTTTGCGGCTGCTGATTTCCAACTGATAGGTTATGATCCTCATCAGAAGATAGAAATGAAAATGGCCGTATAG

Protein Analysis

81

Amino Acids

9.22

Weight (kDa)

6.49

Isoelectric Point (pI)

62.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 76, 176
AclWI GGATC 1 cut(s) 200
AcoI YGGCCR 1 cut(s) 234
AgsI TTSAA 2 cut(s) 110, 139
AjnI CCWGG 1 cut(s) 34
AluBI AGCT 1 cut(s) 106
AluI AGCT 1 cut(s) 106
AlwI GGATC 1 cut(s) 200
AoxI GGCC 2 cut(s) 89, 234
ApeKI GCWGC 2 cut(s) 103, 179
AsuHPI GGTGA 1 cut(s) 50
BbvI GCAGC 2 cut(s) 115, 166
BceAI ACGGC 1 cut(s) 221
BciT130I CCWGG 1 cut(s) 36
BisI GCNGC 3 cut(s) 104, 177, 180
BlsI GCNGC 3 cut(s) 105, 178, 181
Bme1390I CCNGG 1 cut(s) 36
BmrFI CCNGG 1 cut(s) 36
BmsI GCATC 1 cut(s) 52
BsaBI GATNNNNATC 1 cut(s) 210
Bse8I GATNNNNATC 1 cut(s) 210
BseBI CCWGG 1 cut(s) 36
BseGI GGATG 1 cut(s) 67
BseJI GATNNNNATC 1 cut(s) 210
BseMII CTCAG 1 cut(s) 141
BseXI GCAGC 2 cut(s) 115, 166
BshFI GGCC 2 cut(s) 91, 236
BsnI GGCC 2 cut(s) 91, 236
Bsp143I GATC 2 cut(s) 141, 205
BspACI CCGC 2 cut(s) 76, 176
BspANI GGCC 2 cut(s) 91, 236
BspCNI CTCAG 1 cut(s) 142
BspPI GGATC 1 cut(s) 200
BssMI GATC 2 cut(s) 141, 205
Bst2UI CCWGG 1 cut(s) 36
BstDEI CTNAG 2 cut(s) 55, 150
BstF5I GGATG 1 cut(s) 67
BstKTI GATC 2 cut(s) 144, 208
BstMBI GATC 2 cut(s) 141, 205
BstMWI GCNNNNNNNGC 1 cut(s) 103
BstNI CCWGG 1 cut(s) 36
BstSCI CCNGG 1 cut(s) 34
BstV1I GCAGC 2 cut(s) 115, 166
BsuRI GGCC 2 cut(s) 91, 236
BtsCI GGATG 1 cut(s) 67
CviAII CATG 4 cut(s) 5, 15, 50, 68
CviJI RGCY 5 cut(s) 91, 106, 124, 179, 236
CviKI_1 RGCY 5 cut(s) 91, 106, 124, 179, 236
DdeI CTNAG 2 cut(s) 55, 150
DpnI GATC 2 cut(s) 143, 207
DpnII GATC 2 cut(s) 141, 205
EaeI YGGCCR 1 cut(s) 234
Eco147I AGGCCT 1 cut(s) 91
EcoRII CCWGG 1 cut(s) 34
EcoT22I ATGCAT 1 cut(s) 6
FaeI CATG 4 cut(s) 8, 18, 53, 71
FaiI YATR 7 cut(s) 6, 16, 51, 69, 164, 204, 241
FatI CATG 4 cut(s) 4, 14, 49, 67
Fnu4HI GCNGC 3 cut(s) 104, 177, 180
FokI GGATG 1 cut(s) 74
Fsp4HI GCNGC 3 cut(s) 104, 177, 180
GluI GCNGC 3 cut(s) 104, 177, 180
HaeIII GGCC 2 cut(s) 91, 236
Hin1II CATG 4 cut(s) 8, 18, 53, 71
HinfI GANTC 1 cut(s) 167
HphI GGTGA 1 cut(s) 50
Hpy166II GTNNAC 1 cut(s) 73
Hpy188I TCNGA 1 cut(s) 216
Hpy188III TCNNGA 1 cut(s) 149
Hpy8I GTNNAC 1 cut(s) 73
HpyCH4V TGCA 2 cut(s) 4, 97
HpyF10VI GCNNNNNNNGC 1 cut(s) 103
HpyF3I CTNAG 2 cut(s) 55, 150
Hsp92II CATG 4 cut(s) 8, 18, 53, 71
Kzo9I GATC 2 cut(s) 141, 205
LmnI GCTCC 1 cut(s) 100
LpnPI CCDG 5 cut(s) 21, 48, 73, 83, 162
Lsp1109I GCAGC 2 cut(s) 115, 166
LweI GCATC 1 cut(s) 52
MalI GATC 2 cut(s) 143, 207
MboI GATC 2 cut(s) 141, 205
MboII GAAGA 2 cut(s) 151, 229
MluCI AATT 2 cut(s) 26, 132
MmeI TCCRAC 1 cut(s) 214
MnlI CCTC 1 cut(s) 219
Mph1103I ATGCAT 1 cut(s) 6
MslI CAYNNNNRTG 1 cut(s) 19
MspR9I CCNGG 1 cut(s) 36
MvaI CCWGG 1 cut(s) 36
MwoI GCNNNNNNNGC 1 cut(s) 103
NdeII GATC 2 cut(s) 141, 205
NlaIII CATG 4 cut(s) 8, 18, 53, 71
NsiI ATGCAT 1 cut(s) 6
PceI AGGCCT 1 cut(s) 91
PfeI GAWTC 1 cut(s) 167
PkrI GCNGC 3 cut(s) 105, 178, 181
Psp6I CCWGG 1 cut(s) 34
PspGI CCWGG 1 cut(s) 34
RseI CAYNNNNRTG 1 cut(s) 19
SatI GCNGC 3 cut(s) 104, 177, 180
Sau3AI GATC 2 cut(s) 141, 205
ScrFI CCNGG 1 cut(s) 36
SetI ASST 2 cut(s) 108, 202
SfaNI GCATC 1 cut(s) 52
SmiMI CAYNNNNRTG 1 cut(s) 19
Sse9I AATT 2 cut(s) 26, 132
SseBI AGGCCT 1 cut(s) 91
SsiI CCGC 2 cut(s) 76, 176
StuI AGGCCT 1 cut(s) 91
StyD4I CCNGG 1 cut(s) 34
TasI AATT 2 cut(s) 26, 132
TauI GCSGC 1 cut(s) 179
TfiI GAWTC 1 cut(s) 167
TseI GCWGC 2 cut(s) 103, 179
TspDTI ATGAA 3 cut(s) 34, 38, 242
XcmI CCANNNNNNNNNTGG 1 cut(s) 32
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.