Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0002969

Physical Location & Seq

Genomic Coordinates Reverse (-)

21938971 .. 21943011

Gene Structure 4041 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G012100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGTCATGTCAGTGTGTTGCGGCCTTACCGCACTTCCAGAATAATTGGCTGTGCGGTCCTCGTTTGAAGTTGCTTCCTTTGAGTCTGTGTTGTTCCTTGTATTCAACAATGGCTGGTGAAGTAGTGACTGTAAATGGAAATGGCAATGGAAACACCCAGCTGAATCCACAGAGGACTTACCAAGTTGTTGTGGCTGCAACTCGAGAAATGGGTATTGGAAAGGATGGGAAACTACCTTGGAAACTTCCTTCTGATCTCAAGTTCTTTAAGGATGTCACTGTAACCACATCAGATCCCGGAAAAAAGAATGCAATTATAATGGGCAGAAAAACATGGGAGAGCATTCCCCCTGAGCATCGGCCTCTACCTGGACGCCTTAATGTTGTTCTGACTCGTTCTGGGAGTTTTGATATAGCTACTGCAGAGAATGTCGTCATATGTGGGAGCATGGCCTCTGCTCTGGAGCTGTTAGCTGCTTCTCCTTACTGTCTGTCAATTGACAAAGTGTTTCTCATAGGAGGTGGCCAGATATTGAGGGAAGCTCTCAATGGGCCTGGCTGTGATGCAATTCACATTACAGAAATAGAGACCAACATTGAATGTGATACTTTCATCCCTGCAATTGATTCCACTGTATTTCAGCCCTGGTATTCATCTTTTCCCAAGGTGGAGAATAGCATTCGTTATTCCCTCACGACTTATGTGCGTGTGAGGAGTTCTGAAGTTGGATCCCTTTGTGAAAACAATGATCTGAACTGTAATATTAGGTCGGATTCCATTAAGTGTGAGGTAAAGAAGTTCTCTTTCCTCCCCAAGATGATTTTCGAGAAACATGAGGAGTACATGTATCTAAATCTGGTTCAAGATATACTCTCAGATGGTACTTCTAAGGATGATAGGACTGGGACTGGTACTTTATCAAAATTTGGTTGCCAGATGAGGTTCAATCTGCGCAGAAGTTTTCCTCTTCTAACTACCAAGAAAGTATTTTGGCGAGGGGTTGTTGAAGAACTTCTGTGGTTCCTCAGTGGTTCAACCAATGCCAAGGTCCTTCAGGAGAAAGGCATCCGCATATGGGATGGAAATGCATCTAGAGACTACCTTGATAGCATTGGTTTAACGGGCAGGGAGGAGGGCGACTTAGGACCAGTATATGGGTTCCAGTGGCGACACTGTGGTGCCAGGTATACTGACATGCATGCTGACTACACTGGCCAAGGATTTGACCAGTTGTTAGATGTTATTGACAAGATCAAAAATAATCCTGATGATCGACGGATTATTCTTTCAGCTTGGAATCCTTCTGATCTGAAATTGATGGCACTTCCACCTTGTCACATGTTTGCTCAGTTCTATGTTGCAAAAGGAGAGTTATCATGCCAAATGTATCAGCGTTCTTCTGACATGGGCCTGGGCGTGCCATTTAACATTGCGTCATATGCGCTTCTGACATGCATGATTGCTCATGTCTGTGATCTTGTTCCAGGAGATTTCGTTCACGTTTTAGGGGATGCTCATATTTACCGCACTCACATCAGGCCTCTGCAAGAGCAACTTCAGAAACTGCCCAAGCCTCTTCCAATTTTGAAGATCAATCCCGATAAAAAGAATATAGATTCATTTGTGGCAGCTGATTTCGAACTCATAGGTTATAATCCTCATGAGAAGATAGAAATGAAAATGGCTGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004146 GO:0004799 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006575 GO:0006725 GO:0006732 GO:0006760 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0009058 GO:0009108 GO:0009256 GO:0009257 GO:0009396 GO:0009987 GO:0016053 GO:0016491 GO:0016645 GO:0016646 GO:0016740 GO:0016741 GO:0018130 GO:0019438 GO:0019752 GO:0032259 GO:0034641 GO:0042083 GO:0042398 GO:0042558 GO:0042559 GO:0043436 GO:0043603 GO:0043604 GO:0043648 GO:0043650 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046483 GO:0046653 GO:0046654 GO:0051186 GO:0051188 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00240 ko00670 ko00790 ko01100 map00240 map00670 map00790 map01100

Pfam Domains

Protein Families

DHFR_1 Thymidylat_synt

Protein Analysis

563

Amino Acids

62.99

Weight (kDa)

6.85

Isoelectric Point (pI)

42.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DHFR_1	PF00186	61 - 236	1.3e-36	Dihydrofolate reductase
Thymidylat_synt	PF00303	282 - 563	7.3e-116	Thymidylate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002969)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16370 AT2G16370 AT2G16370 AT4G34570 AT4G34570 AT4G34570 AT4G34570
fragaria_vesca	FvH4_2g09370 FvH4_2g09370 FvH4_2g09370 FvH4_2g09370 FvH4_2g09370 FvH4_2g09370
malus_domestica	MD05G1063200.v1.1 MD10G1070700.v1.1
prunus_persica	Prupe.8G092500_v2.0.a1 Prupe.8G092500_v2.0.a1
pyrus_communis	pycom05g05460 pycom05g05470 pycom10g05650
rosa_chinensis	RchiOBHm_Chr6g0265641
rosa_laevigata	RLG00000014170
rosa_multiflora	Rmu_sc0003233.1_g000014 Rmu_sc0003233.1_g000015 Rmu_sc0009907.1_g000015
rosa_roxburghii	Rroxscaffold_175G00432460 Rroxscaffold_6G00388530 Rroxscaffold_7G00202550
rosa_rugosa	Rorug06G0018100
rosa_samantha	Rh1BG086900 Rh3BG370300 Rh3CG367200 Rh6AG140100 Rh6BG140000 Rh6CG137100 Rh6DG123400
rosa_wichuraiana	Rw6G012050 Rw6G012100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	317, 1653
Acc16I	TGCGCA	1 cut(s)	953
AccB1I	GGYRCC	1 cut(s)	1178
AccB7I	CCANNNNNTGG	1 cut(s)	1154
AccI	GTMKAC	1 cut(s)	1187
AciI	CCGC	5 cut(s)	20, 29, 54, 1069, 1525
AclWI	GGATC	3 cut(s)	287, 723, 736
AcoI	YGGCCR	2 cut(s)	523, 1213
AcsI	RAATTY	1 cut(s)	923
AcuI	CTGAAG	3 cut(s)	741, 1037, 1541
AcyI	GRCGYC	1 cut(s)	373
AfaI	GTAC	3 cut(s)	842, 883, 913
AfiI	CCNNNNNNNGG	3 cut(s)	368, 1075, 1154
AflIII	ACRYGT	2 cut(s)	843, 1338
AgsI	TTSAA	8 cut(s)	67, 105, 599, 863, 946, 1007, 1035, 1588
AjnI	CCWGG	6 cut(s)	367, 553, 644, 1181, 1410, 1483
AjuI	GAANNNNNNNTTGG	4 cut(s)	198, 230, 806, 838
AleI	CACNNNNGTG	1 cut(s)	1176
AloI	GAACNNNNNNTCC	2 cut(s)	1479, 1511
AluBI	AGCT	7 cut(s)	160, 416, 466, 473, 542, 1292, 1631
AluI	AGCT	7 cut(s)	160, 416, 466, 473, 542, 1292, 1631
Alw26I	GTCTC	2 cut(s)	581, 1089
AlwI	GGATC	3 cut(s)	287, 723, 736
AlwNI	CAGNNNCTG	1 cut(s)	1564
Ama87I	CYCGRG	1 cut(s)	201
AoxI	GGCC	8 cut(s)	21, 359, 450, 523, 551, 1213, 1408, 1538
ApeKI	GCWGC	3 cut(s)	194, 473, 1628
ApoI	RAATTY	1 cut(s)	923
Asp700I	GAANNNNTTC	1 cut(s)	1011
AspLEI	GCGC	2 cut(s)	954, 1444
AspS9I	GGNCC	5 cut(s)	56, 551, 1048, 1145, 1408
AsuC2I	CCSGG	1 cut(s)	297
AsuHPI	GGTGA	1 cut(s)	128
AsuII	TTCGAA	1 cut(s)	1638
AvaI	CYCGRG	1 cut(s)	201
AvaII	GGWCC	3 cut(s)	56, 1048, 1145
BalI	TGGCCA	2 cut(s)	525, 1215
BamHI	GGATCC	1 cut(s)	728
BanI	GGYRCC	1 cut(s)	1178
BbvI	GCAGC	3 cut(s)	181, 460, 1640
BccI	CCATC	4 cut(s)	218, 872, 1073, 1312
BcgI	CGANNNNNNTGC	2 cut(s)	685, 719
BciT130I	CCWGG	6 cut(s)	369, 555, 646, 1183, 1412, 1485
BcnI	CCSGG	1 cut(s)	297
BcoDI	GTCTC	2 cut(s)	581, 1089
BfaI	CTAG	1 cut(s)	1092
BfmI	CTRYAG	1 cut(s)	420
BisI	GCNGC	4 cut(s)	21, 195, 474, 1629
BlsI	GCNGC	4 cut(s)	22, 196, 475, 1630
Bme1390I	CCNGG	7 cut(s)	297, 369, 555, 646, 1183, 1412, 1485
Bme18I	GGWCC	3 cut(s)	56, 1048, 1145
BmeT110I	CYCGRG	1 cut(s)	201
BmgT120I	GGNCC	5 cut(s)	56, 551, 1048, 1145, 1408
BmiI	GGNNCC	4 cut(s)	730, 1022, 1160, 1180
BmrFI	CCNGG	7 cut(s)	297, 369, 555, 646, 1183, 1412, 1485
BmrI	ACTGGG	1 cut(s)	912
BmsI	GCATC	5 cut(s)	364, 553, 1074, 1097, 1501
BmuI	ACTGGG	1 cut(s)	912
BplI	GAGNNNNNCTC	2 cut(s)	526, 558
BpmI	CTGGAG	1 cut(s)	482
Bpu10I	CCTNAGC	1 cut(s)	351
Bpu14I	TTCGAA	1 cut(s)	1638
BpuEI	CTTGAG	1 cut(s)	242
BpuMI	CCSGG	1 cut(s)	297
BsaHI	GRCGYC	1 cut(s)	373
BsaI	GGTCTC	1 cut(s)	581
BsaJI	CCNNGG	6 cut(s)	236, 644, 663, 1044, 1216, 1411
BsaXI	ACNNNNNCTCC	4 cut(s)	830, 860, 1479, 1509
Bsc4I	CCNNNNNNNGG	3 cut(s)	368, 1075, 1154
Bse1I	ACTGG	6 cut(s)	907, 913, 1148, 1162, 1216, 1228
Bse3DI	GCAATG	2 cut(s)	151, 1428
BseBI	CCWGG	6 cut(s)	369, 555, 646, 1183, 1412, 1485
BseDI	CCNNGG	6 cut(s)	236, 644, 663, 1044, 1216, 1411
BseGI	GGATG	7 cut(s)	229, 277, 612, 898, 1065, 1084, 1516
BseLI	CCNNNNNNNGG	3 cut(s)	368, 1075, 1154
BseMI	GCAATG	2 cut(s)	151, 1428
BseMII	CTCAG	4 cut(s)	342, 888, 1039, 1361
BseNI	ACTGG	6 cut(s)	907, 913, 1148, 1162, 1216, 1228
BseRI	GAGGAG	3 cut(s)	727, 851, 1145
BseXI	GCAGC	3 cut(s)	181, 460, 1640
BseYI	CCCAGC	1 cut(s)	156
BshFI	GGCC	8 cut(s)	23, 361, 452, 525, 553, 1215, 1410, 1540
BshNI	GGYRCC	1 cut(s)	1178
BsiHKCI	CYCGRG	1 cut(s)	201
BsiSI	CCGG	1 cut(s)	297
BslFI	GGGAC	1 cut(s)	919
BslI	CCNNNNNNNGG	3 cut(s)	368, 1075, 1154
BsmAI	GTCTC	2 cut(s)	581, 1089
BsmFI	GGGAC	1 cut(s)	919
BsmI	GAATGC	3 cut(s)	313, 342, 678
BsnI	GGCC	8 cut(s)	23, 361, 452, 525, 553, 1215, 1410, 1540
Bso31I	GGTCTC	1 cut(s)	581
BsoBI	CYCGRG	1 cut(s)	201
Bsp119I	TTCGAA	1 cut(s)	1638
Bsp143I	GATC	9 cut(s)	253, 292, 728, 748, 1251, 1270, 1306, 1474, 1590
BspACI	CCGC	5 cut(s)	20, 29, 54, 1069, 1525
BspANI	GGCC	8 cut(s)	23, 361, 452, 525, 553, 1215, 1410, 1540
BspCNI	CTCAG	4 cut(s)	343, 887, 1038, 1360
BspHI	TCATGA	1 cut(s)	1660
BspLI	GGNNCC	4 cut(s)	730, 1022, 1160, 1180
BspMAI	CTGCAG	1 cut(s)	424
BspPI	GGATC	3 cut(s)	287, 723, 736
BspT104I	TTCGAA	1 cut(s)	1638
BspT107I	GGYRCC	1 cut(s)	1178
BspTNI	GGTCTC	1 cut(s)	581
BsrDI	GCAATG	2 cut(s)	151, 1428
BsrI	ACTGG	6 cut(s)	907, 913, 1148, 1162, 1216, 1228
BssECI	CCNNGG	6 cut(s)	236, 644, 663, 1044, 1216, 1411
BssMI	GATC	9 cut(s)	253, 292, 728, 748, 1251, 1270, 1306, 1474, 1590
BssNAI	GTATAC	1 cut(s)	1188
BssNI	GRCGYC	1 cut(s)	373
BssT1I	CCWWGG	4 cut(s)	236, 663, 1044, 1216
Bst1107I	GTATAC	1 cut(s)	1188
Bst2UI	CCWGG	6 cut(s)	369, 555, 646, 1183, 1412, 1485
Bst4CI	ACNGT	6 cut(s)	130, 280, 488, 634, 758, 1175
Bst6I	CTCTTC	2 cut(s)	972, 1581
BstACI	GRCGYC	1 cut(s)	373
BstBI	TTCGAA	1 cut(s)	1638
BstC8I	GCNNGC	2 cut(s)	1200, 1418
BstDEI	CTNAG	6 cut(s)	351, 874, 888, 1025, 1141, 1347
BstF5I	GGATG	7 cut(s)	229, 277, 612, 898, 1065, 1084, 1516
BstHHI	GCGC	2 cut(s)	954, 1444
BstKTI	GATC	9 cut(s)	256, 295, 731, 751, 1254, 1273, 1309, 1477, 1593
BstMAI	GTCTC	2 cut(s)	581, 1089
BstMBI	GATC	9 cut(s)	253, 292, 728, 748, 1251, 1270, 1306, 1474, 1590
BstMWI	GCNNNNNNNGC	1 cut(s)	1439
BstNI	CCWGG	6 cut(s)	369, 555, 646, 1183, 1412, 1485
BstNSI	RCATGY	5 cut(s)	847, 1198, 1202, 1342, 1455
BstSCI	CCNGG	7 cut(s)	295, 367, 553, 644, 1181, 1410, 1483
BstSFI	CTRYAG	1 cut(s)	420
BstV1I	GCAGC	3 cut(s)	181, 460, 1640
BstX2I	RGATCY	2 cut(s)	292, 728
BstYI	RGATCY	2 cut(s)	292, 728
BstZ17I	GTATAC	1 cut(s)	1188
BsuRI	GGCC	8 cut(s)	23, 361, 452, 525, 553, 1215, 1410, 1540
BtsCI	GGATG	7 cut(s)	229, 277, 612, 898, 1065, 1084, 1516
BtsIMutI	CAGTG	7 cut(s)	17, 276, 630, 1033, 1169, 1171, 1209
Cac8I	GCNNGC	2 cut(s)	1200, 1418
CaiI	CAGNNNCTG	1 cut(s)	1564
CciI	TCATGA	1 cut(s)	1660
CfoI	GCGC	2 cut(s)	954, 1444
Cfr13I	GGNCC	5 cut(s)	56, 551, 1048, 1145, 1408
CseI	GACGC	2 cut(s)	381, 1422
Csp6I	GTAC	3 cut(s)	841, 882, 912
CviQI	GTAC	3 cut(s)	841, 882, 912
DdeI	CTNAG	6 cut(s)	351, 874, 888, 1025, 1141, 1347
DpnI	GATC	9 cut(s)	255, 294, 730, 750, 1253, 1272, 1308, 1476, 1592
DpnII	GATC	9 cut(s)	253, 292, 728, 748, 1251, 1270, 1306, 1474, 1590
EaeI	YGGCCR	2 cut(s)	523, 1213
Eam1104I	CTCTTC	2 cut(s)	972, 1581
EarI	CTCTTC	2 cut(s)	972, 1581
Eco130I	CCWWGG	4 cut(s)	236, 663, 1044, 1216
Eco147I	AGGCCT	1 cut(s)	1540
Eco31I	GGTCTC	1 cut(s)	581
Eco47I	GGWCC	3 cut(s)	56, 1048, 1145
Eco57I	CTGAAG	3 cut(s)	741, 1037, 1541
Eco88I	CYCGRG	1 cut(s)	201
EcoO109I	RGGNCCY	1 cut(s)	1048
EcoRII	CCWGG	6 cut(s)	367, 553, 644, 1181, 1410, 1483
EcoT14I	CCWWGG	4 cut(s)	236, 663, 1044, 1216
EcoT22I	ATGCAT	3 cut(s)	1090, 1200, 1457
ErhI	CCWWGG	4 cut(s)	236, 663, 1044, 1216
FalI	AAGNNNNNCTT	2 cut(s)	1539, 1571
FaqI	GGGAC	1 cut(s)	919
FauNDI	CATATG	3 cut(s)	437, 1073, 1438
FblI	GTMKAC	1 cut(s)	1187
Fnu4HI	GCNGC	4 cut(s)	21, 195, 474, 1629
FokI	GGATG	7 cut(s)	236, 284, 599, 905, 1052, 1091, 1523
Fsp4HI	GCNGC	4 cut(s)	21, 195, 474, 1629
FspBI	CTAG	1 cut(s)	1092
FspI	TGCGCA	1 cut(s)	953
GlaI	GCGC	2 cut(s)	953, 1443
GluI	GCNGC	4 cut(s)	21, 195, 474, 1629
GsaI	CCCAGC	1 cut(s)	160
GsuI	CTGGAG	1 cut(s)	482
HaeIII	GGCC	8 cut(s)	23, 361, 452, 525, 553, 1215, 1410, 1540
HapII	CCGG	1 cut(s)	297
HgaI	GACGC	2 cut(s)	381, 1422
HhaI	GCGC	2 cut(s)	954, 1444
Hin1I	GRCGYC	1 cut(s)	373
Hin6I	GCGC	2 cut(s)	952, 1442
HinP1I	GCGC	2 cut(s)	952, 1442
HinfI	GANTC	7 cut(s)	82, 163, 391, 626, 773, 1297, 1616
HpaII	CCGG	1 cut(s)	297
HphI	GGTGA	1 cut(s)	128
Hpy166II	GTNNAC	2 cut(s)	1188, 1498
Hpy8I	GTNNAC	2 cut(s)	1188, 1498
Hpy99I	CGWCG	1 cut(s)	1278
HpyAV	CCTTC	3 cut(s)	258, 1061, 1311
HpyCH4III	ACNGT	6 cut(s)	130, 280, 488, 634, 758, 1175
HpyCH4IV	ACGT	1 cut(s)	1500
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1439
HpyF3I	CTNAG	6 cut(s)	351, 874, 888, 1025, 1141, 1347
HpySE526I	ACGT	1 cut(s)	1500
Hsp92I	GRCGYC	1 cut(s)	373
HspAI	GCGC	2 cut(s)	952, 1442
Kzo9I	GATC	9 cut(s)	253, 292, 728, 748, 1251, 1270, 1306, 1474, 1590
LmnI	GCTCC	2 cut(s)	444, 463
Lsp1109I	GCAGC	3 cut(s)	181, 460, 1640
LweI	GCATC	5 cut(s)	364, 553, 1074, 1097, 1501
MaeI	CTAG	1 cut(s)	1092
MaeII	ACGT	1 cut(s)	1500
MaeIII	GTNAC	4 cut(s)	124, 274, 280, 1334
MalI	GATC	9 cut(s)	255, 294, 730, 750, 1253, 1272, 1308, 1476, 1592
MboI	GATC	9 cut(s)	253, 292, 728, 748, 1251, 1270, 1306, 1474, 1590
MboII	GAAGA	6 cut(s)	959, 1019, 1389, 1568, 1600, 1678
MfeI	CAATTG	2 cut(s)	495, 621
MflI	RGATCY	2 cut(s)	292, 728
MlsI	TGGCCA	2 cut(s)	525, 1215
MluCI	AATT	8 cut(s)	43, 312, 495, 567, 621, 923, 1313, 1581
MluNI	TGGCCA	2 cut(s)	525, 1215
MlyI	GAGTC	2 cut(s)	91, 385
MmeI	TCCRAC	2 cut(s)	706, 750
Mox20I	TGGCCA	2 cut(s)	525, 1215
Mph1103I	ATGCAT	3 cut(s)	1090, 1200, 1457
MroXI	GAANNNNTTC	1 cut(s)	1011
MscI	TGGCCA	2 cut(s)	525, 1215
MseI	TTAA	5 cut(s)	267, 378, 780, 1118, 1425
MslI	CAYNNNNRTG	3 cut(s)	10, 1176, 1470
Msp20I	TGGCCA	2 cut(s)	525, 1215
MspA1I	CMGCKG	2 cut(s)	160, 1631
MspI	CCGG	1 cut(s)	297
MspR9I	CCNGG	7 cut(s)	297, 369, 555, 646, 1183, 1412, 1485
MunI	CAATTG	2 cut(s)	495, 621
Mva1269I	GAATGC	3 cut(s)	313, 342, 678
MvaI	CCWGG	6 cut(s)	369, 555, 646, 1183, 1412, 1485
MwoI	GCNNNNNNNGC	1 cut(s)	1439
NciI	CCSGG	1 cut(s)	297
NdeI	CATATG	3 cut(s)	437, 1073, 1438
NdeII	GATC	9 cut(s)	253, 292, 728, 748, 1251, 1270, 1306, 1474, 1590
NlaIV	GGNNCC	4 cut(s)	730, 1022, 1160, 1180
NmuCI	GTSAC	3 cut(s)	124, 274, 1334
NsbI	TGCGCA	1 cut(s)	953
NsiI	ATGCAT	3 cut(s)	1090, 1200, 1457
NspI	RCATGY	5 cut(s)	847, 1198, 1202, 1342, 1455
NspV	TTCGAA	1 cut(s)	1638
OliI	CACNNNNGTG	1 cut(s)	1176
PaeI	GCATGC	1 cut(s)	1202
PaeR7I	CTCGAG	1 cut(s)	201
PagI	TCATGA	1 cut(s)	1660
PceI	AGGCCT	1 cut(s)	1540
PciI	ACATGT	2 cut(s)	843, 1338
PctI	GAATGC	3 cut(s)	313, 342, 678
PdmI	GAANNNNTTC	1 cut(s)	1011
PfeI	GAWTC	5 cut(s)	163, 626, 773, 1297, 1616
PflMI	CCANNNNNTGG	1 cut(s)	1154
PfoI	TCCNGGA	2 cut(s)	295, 1483
PkrI	GCNGC	4 cut(s)	22, 196, 475, 1630
PleI	GAGTC	2 cut(s)	90, 385
PpsI	GAGTC	2 cut(s)	90, 385
PpuMI	RGGWCCY	1 cut(s)	1048
PscI	ACATGT	2 cut(s)	843, 1338
PsiI	TTATAA	2 cut(s)	317, 1653
Psp5II	RGGWCCY	1 cut(s)	1048
Psp6I	CCWGG	6 cut(s)	367, 553, 644, 1181, 1410, 1483
PspFI	CCCAGC	1 cut(s)	156
PspGI	CCWGG	6 cut(s)	367, 553, 644, 1181, 1410, 1483
PspN4I	GGNNCC	4 cut(s)	730, 1022, 1160, 1180
PspPI	GGNCC	5 cut(s)	56, 551, 1048, 1145, 1408
PspPPI	RGGWCCY	1 cut(s)	1048
PstI	CTGCAG	1 cut(s)	424
PstNI	CAGNNNCTG	1 cut(s)	1564
PsuI	RGATCY	2 cut(s)	292, 728
PvuII	CAGCTG	2 cut(s)	160, 1631
RsaI	GTAC	3 cut(s)	842, 883, 913
RsaNI	GTAC	3 cut(s)	841, 882, 912
RseI	CAYNNNNRTG	3 cut(s)	10, 1176, 1470
SaqAI	TTAA	5 cut(s)	267, 378, 780, 1118, 1425
SatI	GCNGC	4 cut(s)	21, 195, 474, 1629
Sau3AI	GATC	9 cut(s)	253, 292, 728, 748, 1251, 1270, 1306, 1474, 1590
Sau96I	GGNCC	5 cut(s)	56, 551, 1048, 1145, 1408
SchI	GAGTC	2 cut(s)	91, 385
ScrFI	CCNGG	7 cut(s)	297, 369, 555, 646, 1183, 1412, 1485
SfaNI	GCATC	5 cut(s)	364, 553, 1074, 1097, 1501
SfcI	CTRYAG	1 cut(s)	420
Sfr274I	CTCGAG	1 cut(s)	201
SfuI	TTCGAA	1 cut(s)	1638
SinI	GGWCC	3 cut(s)	56, 1048, 1145
SlaI	CTCGAG	1 cut(s)	201
SmiMI	CAYNNNNRTG	3 cut(s)	10, 1176, 1470
SmlI	CTYRAG	2 cut(s)	201, 257
SmoI	CTYRAG	2 cut(s)	201, 257
SphI	GCATGC	1 cut(s)	1202
Sse9I	AATT	8 cut(s)	43, 312, 495, 567, 621, 923, 1313, 1581
SseBI	AGGCCT	1 cut(s)	1540
SsiI	CCGC	5 cut(s)	20, 29, 54, 1069, 1525
SspI	AATATT	1 cut(s)	763
SspMI	CTAG	1 cut(s)	1092
StuI	AGGCCT	1 cut(s)	1540
StyD4I	CCNGG	7 cut(s)	295, 367, 553, 644, 1181, 1410, 1483
StyI	CCWWGG	4 cut(s)	236, 663, 1044, 1216
TaaI	ACNGT	6 cut(s)	130, 280, 488, 634, 758, 1175
TaiI	ACGT	1 cut(s)	1503
TaqI	TCGA	4 cut(s)	202, 825, 1273, 1638
TasI	AATT	8 cut(s)	43, 312, 495, 567, 621, 923, 1313, 1581
TatI	WGTACW	1 cut(s)	840
TauI	GCSGC	1 cut(s)	23
TfiI	GAWTC	5 cut(s)	163, 626, 773, 1297, 1616
Tru1I	TTAA	5 cut(s)	267, 378, 780, 1118, 1425
Tru9I	TTAA	5 cut(s)	267, 378, 780, 1118, 1425
TscAI	CASTG	7 cut(s)	17, 283, 637, 1033, 1169, 1178, 1216
TseFI	GTSAC	3 cut(s)	124, 274, 1334
TseI	GCWGC	3 cut(s)	194, 473, 1628
Tsp45I	GTSAC	3 cut(s)	124, 274, 1334
TspDTI	ATGAA	4 cut(s)	601, 642, 1608, 1691
TspGWI	ACGGA	1 cut(s)	1291
TspRI	CASTG	7 cut(s)	17, 283, 637, 1033, 1169, 1178, 1216
Van91I	CCANNNNNTGG	1 cut(s)	1154
VpaK11BI	GGWCC	3 cut(s)	56, 1048, 1145
XapI	RAATTY	1 cut(s)	923
XbaI	TCTAGA	1 cut(s)	1091
XceI	RCATGY	5 cut(s)	847, 1198, 1202, 1342, 1455
XhoI	CTCGAG	1 cut(s)	201
XmiI	GTMKAC	1 cut(s)	1187
XmnI	GAANNNNTTC	1 cut(s)	1011
XspI	CTAG	1 cut(s)	1092
Zsp2I	ATGCAT	3 cut(s)	1090, 1200, 1457

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.