Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0002969

Physical Location & Seq

Genomic Coordinates Forward (+)

6551600 .. 6554481

Gene Structure 2882 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g05460.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

ATGTCGAAGTGGGCGGTAGCAGCGGGTTTACTGCACTTCTGGAATAATTGGCTGTGCGGCTCTCATTTTAGGCAGTTTCGGTCTATGGGTTCAACTATGGCTGGTGAATTGTTGGTGAGTGCAAATGGAAATGGTAATGCCCAACCCAATCCACAGAGAACGTACCAAGTTGTTGTGGCTGCGACTCGAGAAATGGGTATTGGAAAGGATGGGAAACTGCCTTGGAGACTGCCGTCTGATCTCAAGTTCTTTAAGGACATCACTGTGACCACGTCAGATCCTGCGAAAAAGAATGCGATTATAATGGGTAGAAAAACATGGGAGAGCATTCTACCTGAGCATCAACCTCTACCTGGCCGCCTTAATGTTGTTCTGACTCGTTCCGGGAGTTTTGATATTGCTACTGCAGAGAATGTTGTGATATGCGGAAGCATGGCATCTGCTTTGGAATTGTTAGCTGCTTCTCCTTACTGTCTGTCAATTGAGAAAGTGTTTCTCATTGGAGGTGGCCAGATATTAAGGGAAGCTCTCAATGCGCCTGGCTGTGAAGCCATTCACATTACAGAAATAGAGACAAACATTGAATGTGACACTTTTATCCCTGCAATTGATTCCTCTGTATTTCAGCCGTGGTATTCATCCTTTCCTAAGGTTGAAATTGGCATTCGTCATTCTTTCACAACTTATGTTCGTGTAAGAAATTCTGCAGTTGAATCCCTTTGTGAAAACAATGATCTGAACTCTAATGGTAAGTCAGACTCTATTAAGTGTGAGGTGAAGAATTTTTCTTTTCTGCCGAAGATGATTTTTGAGAAACATGAGGAGCACATGTATCTAAGGTTGGTTCGAGAAATACTCTCTGATGGCACTGCTAAGGATGACAGGACAGGGACTGGTACTTTGTCAAAATTTGGTTGCCAGATGCGGTTTAATCTGCGAAGAACTTTTCCCCTTCTGACAACTAAGAAAGTATTTTGGCGAGGGGTTGTTGAAGAACTTCTGTGGTTCATCAGTGGTTCAACAAATGCCAAGGTCCTTCAGGAGAAAGGCATTCACATATGGGATGGGAATGCATCTAGAGACTACCTTGACAGTGTTGGTTTAACTGACAAGGAAGAGGGCGACTTGGGACCAGTATATGGATTCCAGTGGCGACACTTTGGTGCCAGGTATACTGACATGCATGCTGACTACACTGGTCAAGGATTTGATCAGTTGCATGAATCGACAGAGATGTTATTGACAAGATTAAAAACAATCCCGATGATCGGCGGATTATACTGTCAGCATGGAATCCTTCTGATCTCAAATCGATGGCACTCCCACCTTGTCACATGTTTGCTCAGTTCTATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004146 GO:0004799 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006575 GO:0006725 GO:0006732 GO:0006760 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0009058 GO:0009108 GO:0009256 GO:0009257 GO:0009396 GO:0009987 GO:0016053 GO:0016491 GO:0016645 GO:0016646 GO:0016740 GO:0016741 GO:0018130 GO:0019438 GO:0019752 GO:0032259 GO:0034641 GO:0042083 GO:0042398 GO:0042558 GO:0042559 GO:0043436 GO:0043603 GO:0043604 GO:0043648 GO:0043650 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046483 GO:0046653 GO:0046654 GO:0051186 GO:0051188 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00240 ko00670 ko00790 ko01100 map00240 map00670 map00790 map01100

Pfam Domains

Protein Families

DHFR_1 Thymidylat_synt

Protein Analysis

452

Amino Acids

50.55

Weight (kDa)

7.21

Isoelectric Point (pI)

39.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002969)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16370 AT2G16370 AT2G16370 AT4G34570 AT4G34570 AT4G34570 AT4G34570
fragaria_vesca	FvH4_2g09370 FvH4_2g09370 FvH4_2g09370 FvH4_2g09370 FvH4_2g09370 FvH4_2g09370
malus_domestica	MD05G1063200.v1.1 MD10G1070700.v1.1
prunus_persica	Prupe.8G092500_v2.0.a1 Prupe.8G092500_v2.0.a1
pyrus_communis	pycom05g05460 pycom05g05470 pycom10g05650
rosa_chinensis	RchiOBHm_Chr6g0265641
rosa_laevigata	RLG00000014170
rosa_multiflora	Rmu_sc0003233.1_g000014 Rmu_sc0003233.1_g000015 Rmu_sc0009907.1_g000015
rosa_roxburghii	Rroxscaffold_175G00432460 Rroxscaffold_6G00388530 Rroxscaffold_7G00202550
rosa_rugosa	Rorug06G0018100
rosa_samantha	Rh1BG086900 Rh3BG370300 Rh3CG367200 Rh6AG140100 Rh6BG140000 Rh6CG137100 Rh6DG123400
rosa_wichuraiana	Rw6G012050 Rw6G012100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	302
AccB1I	GGYRCC	1 cut(s)	1163
AccB7I	CCANNNNNTGG	1 cut(s)	1139
AccI	GTMKAC	1 cut(s)	1172
AciI	CCGC	7 cut(s)	14, 23, 57, 358, 426, 925, 1272
AclWI	GGATC	1 cut(s)	272
AcoI	YGGCCR	2 cut(s)	355, 508
AcsI	RAATTY	3 cut(s)	700, 781, 908
AcuI	CTGAAG	1 cut(s)	1022
AfaI	GTAC	2 cut(s)	164, 898
AfiI	CCNNNNNNNGG	3 cut(s)	353, 1139, 1268
AflIII	ACRYGT	2 cut(s)	828, 1334
AgsI	TTSAA	6 cut(s)	93, 584, 656, 713, 992, 1020
AjiI	CACGTC	1 cut(s)	273
AjnI	CCWGG	3 cut(s)	352, 538, 1166
AjuI	GAANNNNNNNTTGG	2 cut(s)	183, 215
AleI	CACNNNNGTG	1 cut(s)	1161
AluBI	AGCT	2 cut(s)	458, 527
AluI	AGCT	2 cut(s)	458, 527
Alw21I	GWGCWC	1 cut(s)	828
Alw26I	GTCTC	3 cut(s)	220, 566, 1074
AlwI	GGATC	1 cut(s)	272
AlwNI	CAGNNNCTG	2 cut(s)	281, 893
Ama87I	CYCGRG	1 cut(s)	186
AoxI	GGCC	2 cut(s)	355, 508
ApeKI	GCWGC	3 cut(s)	20, 179, 458
ApoI	RAATTY	3 cut(s)	700, 781, 908
ArsI	GACNNNNNNTTYG	2 cut(s)	883, 915
Asp700I	GAANNNNTTC	2 cut(s)	552, 996
AspLEI	GCGC	1 cut(s)	538
AspS9I	GGNCC	2 cut(s)	1033, 1130
AsuC2I	CCSGG	1 cut(s)	385
AsuHPI	GGTGA	3 cut(s)	116, 127, 787
AvaI	CYCGRG	1 cut(s)	186
AvaII	GGWCC	2 cut(s)	1033, 1130
AxyI	CCTNAGG	1 cut(s)	648
BalI	TGGCCA	1 cut(s)	510
BanI	GGYRCC	1 cut(s)	1163
Bbv12I	GWGCWC	1 cut(s)	828
BbvI	GCAGC	3 cut(s)	32, 166, 445
BccI	CCATC	4 cut(s)	203, 857, 1058, 1308
BceAI	ACGGC	2 cut(s)	217, 613
BciT130I	CCWGG	3 cut(s)	354, 540, 1168
BclI	TGATCA	1 cut(s)	1210
BcnI	CCSGG	1 cut(s)	385
BcoDI	GTCTC	3 cut(s)	220, 566, 1074
BfaI	CTAG	1 cut(s)	1077
BfmI	CTRYAG	2 cut(s)	405, 705
BisI	GCNGC	5 cut(s)	21, 58, 180, 358, 459
BlsI	GCNGC	5 cut(s)	22, 59, 181, 359, 460
Bme1390I	CCNGG	4 cut(s)	354, 385, 540, 1168
Bme18I	GGWCC	2 cut(s)	1033, 1130
BmeT110I	CYCGRG	1 cut(s)	186
BmgBI	CACGTC	1 cut(s)	273
BmgT120I	GGNCC	2 cut(s)	1033, 1130
BmiI	GGNNCC	2 cut(s)	1131, 1165
BmrFI	CCNGG	4 cut(s)	354, 385, 540, 1168
BmsI	GCATC	4 cut(s)	349, 446, 912, 1082
BoxI	GACNNNNGTC	1 cut(s)	232
BplI	GAGNNNNNCTC	2 cut(s)	840, 872
Bpu10I	CCTNAGC	2 cut(s)	336, 873
BpuEI	CTTGAG	1 cut(s)	227
BpuMI	CCSGG	1 cut(s)	385
Bsa29I	ATCGAT	1 cut(s)	1312
BsaJI	CCNNGG	3 cut(s)	221, 629, 1029
BsaXI	ACNNNNNCTCC	2 cut(s)	815, 845
Bsc4I	CCNNNNNNNGG	3 cut(s)	353, 1139, 1268
Bse1I	ACTGG	4 cut(s)	898, 1133, 1147, 1201
Bse21I	CCTNAGG	1 cut(s)	648
BseBI	CCWGG	3 cut(s)	354, 540, 1168
BseCI	ATCGAT	1 cut(s)	1312
BseDI	CCNNGG	3 cut(s)	221, 629, 1029
BseGI	GGATG	4 cut(s)	214, 638, 883, 1069
BseLI	CCNNNNNNNGG	3 cut(s)	353, 1139, 1268
BseMII	CTCAG	1 cut(s)	327
BseNI	ACTGG	4 cut(s)	898, 1133, 1147, 1201
BseRI	GAGGAG	1 cut(s)	836
BseXI	GCAGC	3 cut(s)	32, 166, 445
BsgI	GTGCAG	1 cut(s)	17
BshFI	GGCC	2 cut(s)	357, 510
BshNI	GGYRCC	1 cut(s)	1163
BshVI	ATCGAT	1 cut(s)	1312
BsiHKAI	GWGCWC	1 cut(s)	828
BsiHKCI	CYCGRG	1 cut(s)	186
BsiSI	CCGG	1 cut(s)	384
BslFI	GGGAC	2 cut(s)	904, 1143
BslI	CCNNNNNNNGG	3 cut(s)	353, 1139, 1268
BsmAI	GTCTC	3 cut(s)	220, 566, 1074
BsmFI	GGGAC	2 cut(s)	904, 1143
BsmI	GAATGC	5 cut(s)	298, 327, 663, 1050, 1075
BsnI	GGCC	2 cut(s)	357, 510
BsoBI	CYCGRG	1 cut(s)	186
Bsp1286I	GDGCHC	1 cut(s)	828
Bsp143I	GATC	6 cut(s)	238, 277, 733, 1210, 1266, 1302
BspACI	CCGC	7 cut(s)	14, 23, 57, 358, 426, 925, 1272
BspANI	GGCC	2 cut(s)	357, 510
BspCNI	CTCAG	2 cut(s)	328, 1356
BspDI	ATCGAT	1 cut(s)	1312
BspLI	GGNNCC	2 cut(s)	1131, 1165
BspMAI	CTGCAG	2 cut(s)	409, 709
BspPI	GGATC	1 cut(s)	272
BspT107I	GGYRCC	1 cut(s)	1163
BsrI	ACTGG	4 cut(s)	898, 1133, 1147, 1201
BssECI	CCNNGG	3 cut(s)	221, 629, 1029
BssMI	GATC	6 cut(s)	238, 277, 733, 1210, 1266, 1302
BssNAI	GTATAC	1 cut(s)	1173
BssT1I	CCWWGG	2 cut(s)	221, 1029
Bst1107I	GTATAC	1 cut(s)	1173
Bst2UI	CCWGG	3 cut(s)	354, 540, 1168
Bst4CI	ACNGT	4 cut(s)	265, 473, 1094, 1283
Bst6I	CTCTTC	1 cut(s)	1110
BstC8I	GCNNGC	1 cut(s)	1185
BstDEI	CTNAG	6 cut(s)	336, 648, 836, 873, 963, 1343
BstDSI	CCRYGG	1 cut(s)	629
BstF5I	GGATG	4 cut(s)	214, 638, 883, 1069
BstHHI	GCGC	1 cut(s)	538
BstKTI	GATC	6 cut(s)	241, 280, 736, 1213, 1269, 1305
BstMAI	GTCTC	3 cut(s)	220, 566, 1074
BstMBI	GATC	6 cut(s)	238, 277, 733, 1210, 1266, 1302
BstMWI	GCNNNNNNNGC	2 cut(s)	20, 533
BstNI	CCWGG	3 cut(s)	354, 540, 1168
BstNSI	RCATGY	4 cut(s)	832, 1183, 1187, 1338
BstPAI	GACNNNNGTC	1 cut(s)	232
BstSCI	CCNGG	4 cut(s)	352, 383, 538, 1166
BstSFI	CTRYAG	2 cut(s)	405, 705
BstV1I	GCAGC	3 cut(s)	32, 166, 445
BstX2I	RGATCY	1 cut(s)	277
BstYI	RGATCY	1 cut(s)	277
BstZ17I	GTATAC	1 cut(s)	1173
Bsu15I	ATCGAT	1 cut(s)	1312
Bsu36I	CCTNAGG	1 cut(s)	648
BsuRI	GGCC	2 cut(s)	357, 510
BsuTUI	ATCGAT	1 cut(s)	1312
BtgI	CCRYGG	1 cut(s)	629
BtrI	CACGTC	1 cut(s)	273
BtsCI	GGATG	4 cut(s)	214, 638, 883, 1069
BtsI	GCAGTG	1 cut(s)	867
BtsIMutI	CAGTG	6 cut(s)	261, 867, 1018, 1099, 1154, 1194
Cac8I	GCNNGC	1 cut(s)	1185
CaiI	CAGNNNCTG	2 cut(s)	281, 893
CfoI	GCGC	1 cut(s)	538
Cfr13I	GGNCC	2 cut(s)	1033, 1130
ClaI	ATCGAT	1 cut(s)	1312
Csp6I	GTAC	2 cut(s)	163, 897
CviAII	CATG	9 cut(s)	318, 433, 818, 829, 1180, 1184, 1220, 1289, 1335
CviQI	GTAC	2 cut(s)	163, 897
DdeI	CTNAG	6 cut(s)	336, 648, 836, 873, 963, 1343
DpnI	GATC	6 cut(s)	240, 279, 735, 1212, 1268, 1304
DpnII	GATC	6 cut(s)	238, 277, 733, 1210, 1266, 1302
EaeI	YGGCCR	2 cut(s)	355, 508
Eam1104I	CTCTTC	1 cut(s)	1110
EarI	CTCTTC	1 cut(s)	1110
EciI	GGCGGA	1 cut(s)	1287
Eco130I	CCWWGG	2 cut(s)	221, 1029
Eco47I	GGWCC	2 cut(s)	1033, 1130
Eco57I	CTGAAG	1 cut(s)	1022
Eco81I	CCTNAGG	1 cut(s)	648
Eco88I	CYCGRG	1 cut(s)	186
EcoO109I	RGGNCCY	1 cut(s)	1033
EcoRII	CCWGG	3 cut(s)	352, 538, 1166
EcoT14I	CCWWGG	2 cut(s)	221, 1029
EcoT22I	ATGCAT	2 cut(s)	1075, 1185
ErhI	CCWWGG	2 cut(s)	221, 1029
FaeI	CATG	9 cut(s)	321, 436, 821, 832, 1183, 1187, 1223, 1292, 1338
FaqI	GGGAC	2 cut(s)	904, 1143
FatI	CATG	9 cut(s)	317, 432, 817, 828, 1179, 1183, 1219, 1288, 1334
FauI	CCCGC	1 cut(s)	16
FauNDI	CATATG	1 cut(s)	1058
FbaI	TGATCA	1 cut(s)	1210
FblI	GTMKAC	1 cut(s)	1172
Fnu4HI	GCNGC	5 cut(s)	21, 58, 180, 358, 459
FokI	GGATG	4 cut(s)	221, 625, 890, 1076
Fsp4HI	GCNGC	5 cut(s)	21, 58, 180, 358, 459
FspBI	CTAG	1 cut(s)	1077
GlaI	GCGC	1 cut(s)	537
GluI	GCNGC	5 cut(s)	21, 58, 180, 358, 459
HaeIII	GGCC	2 cut(s)	357, 510
HapII	CCGG	1 cut(s)	384
HhaI	GCGC	1 cut(s)	538
Hin1II	CATG	9 cut(s)	321, 436, 821, 832, 1183, 1187, 1223, 1292, 1338
Hin6I	GCGC	1 cut(s)	536
HinP1I	GCGC	1 cut(s)	536
HinfI	GANTC	8 cut(s)	184, 376, 611, 713, 758, 1143, 1223, 1293
HpaII	CCGG	1 cut(s)	384
HphI	GGTGA	3 cut(s)	116, 127, 787
Hpy166II	GTNNAC	2 cut(s)	29, 1173
Hpy188I	TCNGA	8 cut(s)	238, 277, 375, 738, 757, 862, 957, 1302
Hpy188III	TCNNGA	6 cut(s)	40, 188, 848, 1040, 1077, 1261
Hpy8I	GTNNAC	2 cut(s)	29, 1173
HpyAV	CCTTC	3 cut(s)	962, 1046, 1307
HpyCH4III	ACNGT	4 cut(s)	265, 473, 1094, 1283
HpyCH4IV	ACGT	2 cut(s)	161, 272
HpyCH4V	TGCA	8 cut(s)	34, 122, 407, 605, 707, 1073, 1183, 1219
HpyF10VI	GCNNNNNNNGC	2 cut(s)	20, 533
HpyF3I	CTNAG	6 cut(s)	336, 648, 836, 873, 963, 1343
HpySE526I	ACGT	2 cut(s)	161, 272
Hsp92II	CATG	9 cut(s)	321, 436, 821, 832, 1183, 1187, 1223, 1292, 1338
HspAI	GCGC	1 cut(s)	536
Ksp22I	TGATCA	1 cut(s)	1210
Kzo9I	GATC	6 cut(s)	238, 277, 733, 1210, 1266, 1302
LmnI	GCTCC	1 cut(s)	823
Lsp1109I	GCAGC	3 cut(s)	32, 166, 445
LweI	GCATC	4 cut(s)	349, 446, 912, 1082
MaeI	CTAG	1 cut(s)	1077
MaeII	ACGT	2 cut(s)	161, 272
MaeIII	GTNAC	3 cut(s)	265, 587, 1330
MalI	GATC	6 cut(s)	240, 279, 735, 1212, 1268, 1304
MboI	GATC	6 cut(s)	238, 277, 733, 1210, 1266, 1302
MboII	GAAGA	5 cut(s)	790, 811, 951, 1004, 1127
MfeI	CAATTG	2 cut(s)	480, 606
MflI	RGATCY	1 cut(s)	277
MhlI	GDGCHC	1 cut(s)	828
MlsI	TGGCCA	1 cut(s)	510
MluCI	AATT	9 cut(s)	46, 107, 449, 480, 606, 657, 700, 781, 908
MluNI	TGGCCA	1 cut(s)	510
MlyI	GAGTC	3 cut(s)	178, 370, 752
MnlI	CCTC	7 cut(s)	357, 497, 625, 766, 814, 974, 1111
Mox20I	TGGCCA	1 cut(s)	510
Mph1103I	ATGCAT	2 cut(s)	1075, 1185
MroXI	GAANNNNTTC	2 cut(s)	552, 996
MscI	TGGCCA	1 cut(s)	510
MseI	TTAA	7 cut(s)	252, 363, 518, 765, 930, 1103, 1250
MslI	CAYNNNNRTG	2 cut(s)	263, 1161
Msp20I	TGGCCA	1 cut(s)	510
MspA1I	CMGCKG	1 cut(s)	23
MspI	CCGG	1 cut(s)	384
MspR9I	CCNGG	4 cut(s)	354, 385, 540, 1168
MunI	CAATTG	2 cut(s)	480, 606
Mva1269I	GAATGC	5 cut(s)	298, 327, 663, 1050, 1075
MvaI	CCWGG	3 cut(s)	354, 540, 1168
MwoI	GCNNNNNNNGC	2 cut(s)	20, 533
NciI	CCSGG	1 cut(s)	385
NdeI	CATATG	1 cut(s)	1058
NdeII	GATC	6 cut(s)	238, 277, 733, 1210, 1266, 1302
NlaIII	CATG	9 cut(s)	321, 436, 821, 832, 1183, 1187, 1223, 1292, 1338
NlaIV	GGNNCC	2 cut(s)	1131, 1165
NmuCI	GTSAC	3 cut(s)	265, 587, 1330
NsiI	ATGCAT	2 cut(s)	1075, 1185
NspI	RCATGY	4 cut(s)	832, 1183, 1187, 1338
OliI	CACNNNNGTG	1 cut(s)	1161
PaeI	GCATGC	1 cut(s)	1187
PaeR7I	CTCGAG	1 cut(s)	186
PciI	ACATGT	2 cut(s)	828, 1334
PctI	GAATGC	5 cut(s)	298, 327, 663, 1050, 1075
PdmI	GAANNNNTTC	2 cut(s)	552, 996
PfeI	GAWTC	5 cut(s)	611, 713, 1143, 1223, 1293
PflFI	GACNNNGTC	1 cut(s)	271
PflMI	CCANNNNNTGG	1 cut(s)	1139
PfoI	TCCNGGA	1 cut(s)	383
PkrI	GCNGC	5 cut(s)	22, 59, 181, 359, 460
PleI	GAGTC	3 cut(s)	178, 370, 752
PpsI	GAGTC	3 cut(s)	178, 370, 752
PpuMI	RGGWCCY	1 cut(s)	1033
PscI	ACATGT	2 cut(s)	828, 1334
PshAI	GACNNNNGTC	1 cut(s)	232
PsiI	TTATAA	1 cut(s)	302
Psp5II	RGGWCCY	1 cut(s)	1033
Psp6I	CCWGG	3 cut(s)	352, 538, 1166
PspGI	CCWGG	3 cut(s)	352, 538, 1166
PspN4I	GGNNCC	2 cut(s)	1131, 1165
PspPI	GGNCC	2 cut(s)	1033, 1130
PspPPI	RGGWCCY	1 cut(s)	1033
PstI	CTGCAG	2 cut(s)	409, 709
PstNI	CAGNNNCTG	2 cut(s)	281, 893
PsuI	RGATCY	1 cut(s)	277
PsyI	GACNNNGTC	1 cut(s)	271
RsaI	GTAC	2 cut(s)	164, 898
RsaNI	GTAC	2 cut(s)	163, 897
RseI	CAYNNNNRTG	2 cut(s)	263, 1161
SaqAI	TTAA	7 cut(s)	252, 363, 518, 765, 930, 1103, 1250
SatI	GCNGC	5 cut(s)	21, 58, 180, 358, 459
Sau3AI	GATC	6 cut(s)	238, 277, 733, 1210, 1266, 1302
Sau96I	GGNCC	2 cut(s)	1033, 1130
SchI	GAGTC	3 cut(s)	178, 370, 752
ScrFI	CCNGG	4 cut(s)	354, 385, 540, 1168
SduI	GDGCHC	1 cut(s)	828
SfaNI	GCATC	4 cut(s)	349, 446, 912, 1082
SfcI	CTRYAG	2 cut(s)	405, 705
Sfr274I	CTCGAG	1 cut(s)	186
SinI	GGWCC	2 cut(s)	1033, 1130
SlaI	CTCGAG	1 cut(s)	186
SmiMI	CAYNNNNRTG	2 cut(s)	263, 1161
SmlI	CTYRAG	2 cut(s)	186, 242
SmoI	CTYRAG	2 cut(s)	186, 242
SphI	GCATGC	1 cut(s)	1187
Sse9I	AATT	9 cut(s)	46, 107, 449, 480, 606, 657, 700, 781, 908
SsiI	CCGC	7 cut(s)	14, 23, 57, 358, 426, 925, 1272
SspMI	CTAG	1 cut(s)	1077
StyD4I	CCNGG	4 cut(s)	352, 383, 538, 1166
StyI	CCWWGG	2 cut(s)	221, 1029
TaaI	ACNGT	4 cut(s)	265, 473, 1094, 1283
TaiI	ACGT	2 cut(s)	164, 275
TaqI	TCGA	5 cut(s)	5, 187, 847, 1226, 1312
TaqII	GACCGA	1 cut(s)	69
TasI	AATT	9 cut(s)	46, 107, 449, 480, 606, 657, 700, 781, 908
TauI	GCSGC	2 cut(s)	60, 360
TfiI	GAWTC	5 cut(s)	611, 713, 1143, 1223, 1293
Tru1I	TTAA	7 cut(s)	252, 363, 518, 765, 930, 1103, 1250
Tru9I	TTAA	7 cut(s)	252, 363, 518, 765, 930, 1103, 1250
TscAI	CASTG	6 cut(s)	268, 874, 1018, 1099, 1154, 1201
TseFI	GTSAC	3 cut(s)	265, 587, 1330
TseI	GCWGC	3 cut(s)	20, 179, 458
Tsp45I	GTSAC	3 cut(s)	265, 587, 1330
TspDTI	ATGAA	3 cut(s)	627, 997, 1236
TspRI	CASTG	6 cut(s)	268, 874, 1018, 1099, 1154, 1201
Tth111I	GACNNNGTC	1 cut(s)	271
Van91I	CCANNNNNTGG	1 cut(s)	1139
VpaK11BI	GGWCC	2 cut(s)	1033, 1130
XapI	RAATTY	3 cut(s)	700, 781, 908
XbaI	TCTAGA	1 cut(s)	1076
XceI	RCATGY	4 cut(s)	832, 1183, 1187, 1338
XhoI	CTCGAG	1 cut(s)	186
XmiI	GTMKAC	1 cut(s)	1172
XmnI	GAANNNNTTC	2 cut(s)	552, 996
XspI	CTAG	1 cut(s)	1077
Zsp2I	ATGCAT	2 cut(s)	1075, 1185

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.