Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0002969

Physical Location & Seq

Genomic Coordinates Reverse (-)

17448114 .. 17454811

Gene Structure 6698 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG137100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1506 bp

ATGGCTGGTGAAGTAGTGACCGCAAATGGAAATGGCAATGGCAATGGAAACACCCAGCTGAATCCACAGAGGACTTACCAAGTTGTTGTGGCTGCAACTCGAGAAATGGGTATTGGAAAGGATGGGAAACTACCTTGGAAACTTCCTTCTGATCTCAAGTTCTTTAAGGATGTCACTGTAACCACATCAGATCCCGGAAAAAAGAATGCAATTATAATGGGCAGAAAAACATGGGAGAGCATTCCCCCTGAGCATCGGCCTCTACCTGGACGCCTTAATGTTGTTCTGACTCGTTCTGGGAGTTTTGATATAGCTACTGCAGAGAATGTCGTCATATGTGGGAGCATGGCCTCTGCTCTGGAGCTGTTAGCTGCTTCTCCTTACTGTCTGTCAATTGACAAAGTGTTTCTCATAGGAGGTGGCCAGATATTGAGGGAAGCTCTCAATGGACCTGGCTGTGATGCAATTCACATTACAGAAATAGAGACCAACATTGAATGTGATACTTTCATCCCTGCAATTGATTCCACTGTATTTCAGCCATGGTATTCATCTTTTCCCAAGGTGGAGAATAGCATTCGTTATTCCCTCACGACTTATGTGCGTGTGAGGAGTTCTGAAGTTGGATCCCTTTGTGAAAACAATGATCTGAACTGTAACAGTAGGTCGGATTCCATTAAGTGTGAGGTAAAGAAGTTCTCTTTCCTCCCCAAGATGATTTTCGAGAAACATGAGGAGTACATGTATCTAAATCTGGTTCAAGATATACTCTCAGATGGTACTTCTAAGGATGATAGGACTGGGACTGGTACTTTATCAAAATTTGGTTGCCAGATGAGGTTCAATCTGCGCAGAAGTTTTCCTCTTCTAACTACCAAGAAAGTATTTTGGCGAGGGGTTGTTGAAGAACTTCTGTGGTTCCTCAGTGGTTCGACCAATGCCAAGGTCCTTCAGGAGAAAGGCATCCGCATATGGGATGGAAATGCATCTAGAGACTACCTTGATAGCATTGGTTTAACTGGCAGGGGGGAGGGCGACTTAGGACCAGTATATGGGTTCCAGTGGCGACACTTTGGTGCCAGGTATACTGACATGCATGCTGACTACACTGGCCAAGGATTTGACCAGTTGTTAGATGTTATTGACAAGATCAAAAATAATCCTGATGATCGACGGATTATTCTTTCAGCTTGGAATCCTTCTGATCTGAAATTGATGGCACTTCCACCTTGTCACATGTTTGCTCAGTTCTATGTTGCAAAAGGAGAGTTATCATGCCAAATGTATCAGCGTTCTGCTGACATGGGCCTGGGTGTGCCATTTAACATCGCGTCATATGCGCTTCTGACATGCATGATTGCTCATGTCTGTGATCTTGTTCCAGGTGATTTCGTTCACGTTTTAGGGGATGCTCATGTTTACCGCACTCACATCAGGCCTCTGCAGGAGCAACTTCAGAAACTGCCCAAGCCTCTTCCAGTAAGTATAATAAGGTTACAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004146 GO:0004799 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006575 GO:0006725 GO:0006732 GO:0006760 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0009058 GO:0009108 GO:0009256 GO:0009257 GO:0009396 GO:0009987 GO:0016053 GO:0016491 GO:0016645 GO:0016646 GO:0016740 GO:0016741 GO:0018130 GO:0019438 GO:0019752 GO:0032259 GO:0034641 GO:0042083 GO:0042398 GO:0042558 GO:0042559 GO:0043436 GO:0043603 GO:0043604 GO:0043648 GO:0043650 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046483 GO:0046653 GO:0046654 GO:0051186 GO:0051188 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00240 ko00670 ko00790 ko01100 map00240 map00670 map00790 map01100

Pfam Domains

Protein Families

DHFR_1 Thymidylat_synt

Protein Analysis

501

Amino Acids

55.88

Weight (kDa)

7.53

Isoelectric Point (pI)

40.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DHFR_1	PF00186	27 - 202	9.9e-37	Dihydrofolate reductase
Thymidylat_synt	PF00303	248 - 497	7.2e-104	Thymidylate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002969)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16370 AT2G16370 AT2G16370 AT4G34570 AT4G34570 AT4G34570 AT4G34570
fragaria_vesca	FvH4_2g09370 FvH4_2g09370 FvH4_2g09370 FvH4_2g09370 FvH4_2g09370 FvH4_2g09370
malus_domestica	MD05G1063200.v1.1 MD10G1070700.v1.1
prunus_persica	Prupe.8G092500_v2.0.a1 Prupe.8G092500_v2.0.a1
pyrus_communis	pycom05g05460 pycom05g05470 pycom10g05650
rosa_chinensis	RchiOBHm_Chr6g0265641
rosa_laevigata	RLG00000014170
rosa_multiflora	Rmu_sc0003233.1_g000014 Rmu_sc0003233.1_g000015 Rmu_sc0009907.1_g000015
rosa_roxburghii	Rroxscaffold_175G00432460 Rroxscaffold_6G00388530 Rroxscaffold_7G00202550
rosa_rugosa	Rorug06G0018100
rosa_samantha	Rh1BG086900 Rh3BG370300 Rh3CG367200 Rh6AG140100 Rh6BG140000 Rh6CG137100 Rh6DG123400
rosa_wichuraiana	Rw6G012050 Rw6G012100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	215
Acc16I	TGCGCA	1 cut(s)	851
AccB1I	GGYRCC	1 cut(s)	1076
AccB7I	CCANNNNNTGG	1 cut(s)	1052
AccI	GTMKAC	1 cut(s)	1085
AccII	CGCG	1 cut(s)	1331
AciI	CCGC	3 cut(s)	21, 967, 1423
AclWI	GGATC	3 cut(s)	185, 621, 634
AcoI	YGGCCR	2 cut(s)	421, 1111
AcsI	RAATTY	1 cut(s)	821
AcuI	CTGAAG	3 cut(s)	639, 935, 1439
AcyI	GRCGYC	1 cut(s)	271
AfaI	GTAC	3 cut(s)	740, 781, 811
AfiI	CCNNNNNNNGG	3 cut(s)	266, 973, 1052
AflIII	ACRYGT	2 cut(s)	741, 1236
AgsI	TTSAA	4 cut(s)	497, 761, 844, 905
AjnI	CCWGG	5 cut(s)	265, 451, 1079, 1308, 1381
AjuI	GAANNNNNNNTTGG	4 cut(s)	96, 128, 704, 736
AleI	CACNNNNGTG	1 cut(s)	1074
AluBI	AGCT	6 cut(s)	58, 314, 364, 371, 440, 1190
AluI	AGCT	6 cut(s)	58, 314, 364, 371, 440, 1190
Alw26I	GTCTC	2 cut(s)	479, 987
AlwI	GGATC	3 cut(s)	185, 621, 634
AlwNI	CAGNNNCTG	1 cut(s)	1462
Ama87I	CYCGRG	1 cut(s)	99
AoxI	GGCC	6 cut(s)	257, 348, 421, 1111, 1306, 1436
ApeKI	GCWGC	2 cut(s)	92, 371
ApoI	RAATTY	1 cut(s)	821
Asp700I	GAANNNNTTC	1 cut(s)	909
AspLEI	GCGC	2 cut(s)	852, 1342
AspS9I	GGNCC	4 cut(s)	449, 946, 1043, 1306
AsuC2I	CCSGG	1 cut(s)	195
AsuHPI	GGTGA	2 cut(s)	20, 1397
AvaI	CYCGRG	1 cut(s)	99
AvaII	GGWCC	3 cut(s)	449, 946, 1043
BalI	TGGCCA	2 cut(s)	423, 1113
BamHI	GGATCC	1 cut(s)	626
BanI	GGYRCC	1 cut(s)	1076
BbvI	GCAGC	2 cut(s)	79, 358
BccI	CCATC	4 cut(s)	116, 770, 971, 1210
BcgI	CGANNNNNNTGC	2 cut(s)	583, 617
BciT130I	CCWGG	5 cut(s)	267, 453, 1081, 1310, 1383
BcnI	CCSGG	1 cut(s)	195
BcoDI	GTCTC	2 cut(s)	479, 987
BfaI	CTAG	1 cut(s)	990
BfmI	CTRYAG	2 cut(s)	318, 1442
BisI	GCNGC	2 cut(s)	93, 372
BlsI	GCNGC	2 cut(s)	94, 373
Bme1390I	CCNGG	6 cut(s)	195, 267, 453, 1081, 1310, 1383
Bme18I	GGWCC	3 cut(s)	449, 946, 1043
BmeT110I	CYCGRG	1 cut(s)	99
BmgT120I	GGNCC	4 cut(s)	449, 946, 1043, 1306
BmiI	GGNNCC	4 cut(s)	628, 920, 1058, 1078
BmrFI	CCNGG	6 cut(s)	195, 267, 453, 1081, 1310, 1383
BmrI	ACTGGG	1 cut(s)	810
BmsI	GCATC	5 cut(s)	262, 451, 972, 995, 1399
BmuI	ACTGGG	1 cut(s)	810
BplI	GAGNNNNNCTC	2 cut(s)	424, 456
BpmI	CTGGAG	1 cut(s)	380
Bpu10I	CCTNAGC	1 cut(s)	249
BpuEI	CTTGAG	1 cut(s)	140
BpuMI	CCSGG	1 cut(s)	195
BsaHI	GRCGYC	1 cut(s)	271
BsaI	GGTCTC	1 cut(s)	479
BsaJI	CCNNGG	6 cut(s)	134, 542, 561, 942, 1114, 1309
BsaXI	ACNNNNNCTCC	2 cut(s)	728, 758
Bsc4I	CCNNNNNNNGG	3 cut(s)	266, 973, 1052
Bse1I	ACTGG	8 cut(s)	805, 811, 1024, 1046, 1060, 1114, 1126, 1478
Bse3DI	GCAATG	2 cut(s)	43, 49
BseBI	CCWGG	5 cut(s)	267, 453, 1081, 1310, 1383
BseDI	CCNNGG	6 cut(s)	134, 542, 561, 942, 1114, 1309
BseGI	GGATG	7 cut(s)	127, 175, 510, 796, 963, 982, 1414
BseLI	CCNNNNNNNGG	3 cut(s)	266, 973, 1052
BseMI	GCAATG	2 cut(s)	43, 49
BseMII	CTCAG	4 cut(s)	240, 786, 937, 1259
BseNI	ACTGG	8 cut(s)	805, 811, 1024, 1046, 1060, 1114, 1126, 1478
BseRI	GAGGAG	2 cut(s)	625, 749
BseXI	GCAGC	2 cut(s)	79, 358
BseYI	CCCAGC	1 cut(s)	54
Bsh1236I	CGCG	1 cut(s)	1331
BshFI	GGCC	6 cut(s)	259, 350, 423, 1113, 1308, 1438
BshNI	GGYRCC	1 cut(s)	1076
BsiHKCI	CYCGRG	1 cut(s)	99
BsiSI	CCGG	1 cut(s)	195
BslFI	GGGAC	1 cut(s)	817
BslI	CCNNNNNNNGG	3 cut(s)	266, 973, 1052
BsmAI	GTCTC	2 cut(s)	479, 987
BsmFI	GGGAC	1 cut(s)	817
BsmI	GAATGC	3 cut(s)	211, 240, 576
BsnI	GGCC	6 cut(s)	259, 350, 423, 1113, 1308, 1438
Bso31I	GGTCTC	1 cut(s)	479
BsoBI	CYCGRG	1 cut(s)	99
Bsp143I	GATC	8 cut(s)	151, 190, 626, 646, 1149, 1168, 1204, 1372
Bsp19I	CCATGG	1 cut(s)	542
BspACI	CCGC	3 cut(s)	21, 967, 1423
BspANI	GGCC	6 cut(s)	259, 350, 423, 1113, 1308, 1438
BspCNI	CTCAG	4 cut(s)	241, 785, 936, 1258
BspFNI	CGCG	1 cut(s)	1331
BspLI	GGNNCC	4 cut(s)	628, 920, 1058, 1078
BspMAI	CTGCAG	2 cut(s)	322, 1446
BspPI	GGATC	3 cut(s)	185, 621, 634
BspT107I	GGYRCC	1 cut(s)	1076
BspTNI	GGTCTC	1 cut(s)	479
BsrDI	GCAATG	2 cut(s)	43, 49
BsrI	ACTGG	8 cut(s)	805, 811, 1024, 1046, 1060, 1114, 1126, 1478
BssECI	CCNNGG	6 cut(s)	134, 542, 561, 942, 1114, 1309
BssMI	GATC	8 cut(s)	151, 190, 626, 646, 1149, 1168, 1204, 1372
BssNAI	GTATAC	1 cut(s)	1086
BssNI	GRCGYC	1 cut(s)	271
BssT1I	CCWWGG	5 cut(s)	134, 542, 561, 942, 1114
Bst1107I	GTATAC	1 cut(s)	1086
Bst2UI	CCWGG	5 cut(s)	267, 453, 1081, 1310, 1383
Bst4CI	ACNGT	5 cut(s)	178, 386, 532, 656, 662
Bst6I	CTCTTC	2 cut(s)	870, 1479
BstACI	GRCGYC	1 cut(s)	271
BstC8I	GCNNGC	1 cut(s)	1098
BstDEI	CTNAG	6 cut(s)	249, 772, 786, 923, 1039, 1245
BstDSI	CCRYGG	1 cut(s)	542
BstF5I	GGATG	7 cut(s)	127, 175, 510, 796, 963, 982, 1414
BstFNI	CGCG	1 cut(s)	1331
BstHHI	GCGC	2 cut(s)	852, 1342
BstKTI	GATC	8 cut(s)	154, 193, 629, 649, 1152, 1171, 1207, 1375
BstMAI	GTCTC	2 cut(s)	479, 987
BstMBI	GATC	8 cut(s)	151, 190, 626, 646, 1149, 1168, 1204, 1372
BstMWI	GCNNNNNNNGC	1 cut(s)	1337
BstNI	CCWGG	5 cut(s)	267, 453, 1081, 1310, 1383
BstNSI	RCATGY	5 cut(s)	745, 1096, 1100, 1240, 1353
BstSCI	CCNGG	6 cut(s)	193, 265, 451, 1079, 1308, 1381
BstSFI	CTRYAG	2 cut(s)	318, 1442
BstUI	CGCG	1 cut(s)	1331
BstV1I	GCAGC	2 cut(s)	79, 358
BstX2I	RGATCY	2 cut(s)	190, 626
BstYI	RGATCY	2 cut(s)	190, 626
BstZ17I	GTATAC	1 cut(s)	1086
BsuRI	GGCC	6 cut(s)	259, 350, 423, 1113, 1308, 1438
BtgI	CCRYGG	1 cut(s)	542
BtgZI	GCGATG	1 cut(s)	1312
BtsCI	GGATG	7 cut(s)	127, 175, 510, 796, 963, 982, 1414
BtsIMutI	CAGTG	5 cut(s)	174, 528, 931, 1067, 1107
Cac8I	GCNNGC	1 cut(s)	1098
CaiI	CAGNNNCTG	1 cut(s)	1462
CfoI	GCGC	2 cut(s)	852, 1342
Cfr13I	GGNCC	4 cut(s)	449, 946, 1043, 1306
CseI	GACGC	2 cut(s)	279, 1320
Csp6I	GTAC	3 cut(s)	739, 780, 810
CviQI	GTAC	3 cut(s)	739, 780, 810
DdeI	CTNAG	6 cut(s)	249, 772, 786, 923, 1039, 1245
DpnI	GATC	8 cut(s)	153, 192, 628, 648, 1151, 1170, 1206, 1374
DpnII	GATC	8 cut(s)	151, 190, 626, 646, 1149, 1168, 1204, 1372
EaeI	YGGCCR	2 cut(s)	421, 1111
Eam1104I	CTCTTC	2 cut(s)	870, 1479
EarI	CTCTTC	2 cut(s)	870, 1479
Eco130I	CCWWGG	5 cut(s)	134, 542, 561, 942, 1114
Eco147I	AGGCCT	1 cut(s)	1438
Eco31I	GGTCTC	1 cut(s)	479
Eco47I	GGWCC	3 cut(s)	449, 946, 1043
Eco57I	CTGAAG	3 cut(s)	639, 935, 1439
Eco88I	CYCGRG	1 cut(s)	99
EcoO109I	RGGNCCY	1 cut(s)	946
EcoRII	CCWGG	5 cut(s)	265, 451, 1079, 1308, 1381
EcoT14I	CCWWGG	5 cut(s)	134, 542, 561, 942, 1114
EcoT22I	ATGCAT	3 cut(s)	988, 1098, 1355
ErhI	CCWWGG	5 cut(s)	134, 542, 561, 942, 1114
FaqI	GGGAC	1 cut(s)	817
FauNDI	CATATG	3 cut(s)	335, 971, 1336
FblI	GTMKAC	1 cut(s)	1085
Fnu4HI	GCNGC	2 cut(s)	93, 372
FokI	GGATG	7 cut(s)	134, 182, 497, 803, 950, 989, 1421
Fsp4HI	GCNGC	2 cut(s)	93, 372
FspBI	CTAG	1 cut(s)	990
FspI	TGCGCA	1 cut(s)	851
GlaI	GCGC	2 cut(s)	851, 1341
GluI	GCNGC	2 cut(s)	93, 372
GsaI	CCCAGC	1 cut(s)	58
GsuI	CTGGAG	1 cut(s)	380
HaeIII	GGCC	6 cut(s)	259, 350, 423, 1113, 1308, 1438
HapII	CCGG	1 cut(s)	195
HgaI	GACGC	2 cut(s)	279, 1320
HhaI	GCGC	2 cut(s)	852, 1342
Hin1I	GRCGYC	1 cut(s)	271
Hin6I	GCGC	2 cut(s)	850, 1340
HinP1I	GCGC	2 cut(s)	850, 1340
HinfI	GANTC	5 cut(s)	61, 289, 524, 671, 1195
HpaII	CCGG	1 cut(s)	195
HphI	GGTGA	2 cut(s)	20, 1397
Hpy166II	GTNNAC	3 cut(s)	1086, 1396, 1420
Hpy188III	TCNNGA	8 cut(s)	101, 359, 592, 724, 761, 953, 990, 1163
Hpy8I	GTNNAC	3 cut(s)	1086, 1396, 1420
Hpy99I	CGWCG	1 cut(s)	1176
HpyAV	CCTTC	3 cut(s)	156, 959, 1209
HpyCH4III	ACNGT	5 cut(s)	178, 386, 532, 656, 662
HpyCH4IV	ACGT	1 cut(s)	1398
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1337
HpyF3I	CTNAG	6 cut(s)	249, 772, 786, 923, 1039, 1245
HpySE526I	ACGT	1 cut(s)	1398
Hsp92I	GRCGYC	1 cut(s)	271
HspAI	GCGC	2 cut(s)	850, 1340
Kzo9I	GATC	8 cut(s)	151, 190, 626, 646, 1149, 1168, 1204, 1372
LmnI	GCTCC	3 cut(s)	342, 361, 1447
Lsp1109I	GCAGC	2 cut(s)	79, 358
LweI	GCATC	5 cut(s)	262, 451, 972, 995, 1399
MaeI	CTAG	1 cut(s)	990
MaeII	ACGT	1 cut(s)	1398
MaeIII	GTNAC	6 cut(s)	16, 172, 178, 656, 1232, 1494
MalI	GATC	8 cut(s)	153, 192, 628, 648, 1151, 1170, 1206, 1374
MboI	GATC	8 cut(s)	151, 190, 626, 646, 1149, 1168, 1204, 1372
MboII	GAAGA	3 cut(s)	857, 917, 1466
MfeI	CAATTG	2 cut(s)	393, 519
MflI	RGATCY	2 cut(s)	190, 626
MlsI	TGGCCA	2 cut(s)	423, 1113
MluCI	AATT	6 cut(s)	210, 393, 465, 519, 821, 1211
MluNI	TGGCCA	2 cut(s)	423, 1113
MlyI	GAGTC	1 cut(s)	283
MmeI	TCCRAC	2 cut(s)	604, 648
Mox20I	TGGCCA	2 cut(s)	423, 1113
Mph1103I	ATGCAT	3 cut(s)	988, 1098, 1355
MroXI	GAANNNNTTC	1 cut(s)	909
MscI	TGGCCA	2 cut(s)	423, 1113
MseI	TTAA	5 cut(s)	165, 276, 678, 1016, 1323
MslI	CAYNNNNRTG	2 cut(s)	1074, 1368
Msp20I	TGGCCA	2 cut(s)	423, 1113
MspA1I	CMGCKG	1 cut(s)	58
MspI	CCGG	1 cut(s)	195
MspR9I	CCNGG	6 cut(s)	195, 267, 453, 1081, 1310, 1383
MunI	CAATTG	2 cut(s)	393, 519
Mva1269I	GAATGC	3 cut(s)	211, 240, 576
MvaI	CCWGG	5 cut(s)	267, 453, 1081, 1310, 1383
MvnI	CGCG	1 cut(s)	1331
MwoI	GCNNNNNNNGC	1 cut(s)	1337
NciI	CCSGG	1 cut(s)	195
NcoI	CCATGG	1 cut(s)	542
NdeI	CATATG	3 cut(s)	335, 971, 1336
NdeII	GATC	8 cut(s)	151, 190, 626, 646, 1149, 1168, 1204, 1372
NlaIV	GGNNCC	4 cut(s)	628, 920, 1058, 1078
NmuCI	GTSAC	3 cut(s)	16, 172, 1232
NsbI	TGCGCA	1 cut(s)	851
NsiI	ATGCAT	3 cut(s)	988, 1098, 1355
NspI	RCATGY	5 cut(s)	745, 1096, 1100, 1240, 1353
OliI	CACNNNNGTG	1 cut(s)	1074
PaeI	GCATGC	1 cut(s)	1100
PaeR7I	CTCGAG	1 cut(s)	99
PceI	AGGCCT	1 cut(s)	1438
PciI	ACATGT	2 cut(s)	741, 1236
PctI	GAATGC	3 cut(s)	211, 240, 576
PdmI	GAANNNNTTC	1 cut(s)	909
PfeI	GAWTC	4 cut(s)	61, 524, 671, 1195
PflMI	CCANNNNNTGG	1 cut(s)	1052
PfoI	TCCNGGA	1 cut(s)	193
PkrI	GCNGC	2 cut(s)	94, 373
PleI	GAGTC	1 cut(s)	283
PpsI	GAGTC	1 cut(s)	283
PpuMI	RGGWCCY	1 cut(s)	946
PscI	ACATGT	2 cut(s)	741, 1236
PsiI	TTATAA	1 cut(s)	215
Psp5II	RGGWCCY	1 cut(s)	946
Psp6I	CCWGG	5 cut(s)	265, 451, 1079, 1308, 1381
PspFI	CCCAGC	1 cut(s)	54
PspGI	CCWGG	5 cut(s)	265, 451, 1079, 1308, 1381
PspN4I	GGNNCC	4 cut(s)	628, 920, 1058, 1078
PspPI	GGNCC	4 cut(s)	449, 946, 1043, 1306
PspPPI	RGGWCCY	1 cut(s)	946
PstI	CTGCAG	2 cut(s)	322, 1446
PstNI	CAGNNNCTG	1 cut(s)	1462
PsuI	RGATCY	2 cut(s)	190, 626
PvuII	CAGCTG	1 cut(s)	58
RsaI	GTAC	3 cut(s)	740, 781, 811
RsaNI	GTAC	3 cut(s)	739, 780, 810
RseI	CAYNNNNRTG	2 cut(s)	1074, 1368
SaqAI	TTAA	5 cut(s)	165, 276, 678, 1016, 1323
SatI	GCNGC	2 cut(s)	93, 372
Sau3AI	GATC	8 cut(s)	151, 190, 626, 646, 1149, 1168, 1204, 1372
Sau96I	GGNCC	4 cut(s)	449, 946, 1043, 1306
SchI	GAGTC	1 cut(s)	283
ScrFI	CCNGG	6 cut(s)	195, 267, 453, 1081, 1310, 1383
SfaNI	GCATC	5 cut(s)	262, 451, 972, 995, 1399
SfcI	CTRYAG	2 cut(s)	318, 1442
Sfr274I	CTCGAG	1 cut(s)	99
SinI	GGWCC	3 cut(s)	449, 946, 1043
SlaI	CTCGAG	1 cut(s)	99
SmiMI	CAYNNNNRTG	2 cut(s)	1074, 1368
SmlI	CTYRAG	2 cut(s)	99, 155
SmoI	CTYRAG	2 cut(s)	99, 155
SphI	GCATGC	1 cut(s)	1100
Sse9I	AATT	6 cut(s)	210, 393, 465, 519, 821, 1211
SseBI	AGGCCT	1 cut(s)	1438
SsiI	CCGC	3 cut(s)	21, 967, 1423
SspMI	CTAG	1 cut(s)	990
StuI	AGGCCT	1 cut(s)	1438
StyD4I	CCNGG	6 cut(s)	193, 265, 451, 1079, 1308, 1381
StyI	CCWWGG	5 cut(s)	134, 542, 561, 942, 1114
TaaI	ACNGT	5 cut(s)	178, 386, 532, 656, 662
TaiI	ACGT	1 cut(s)	1401
TaqI	TCGA	4 cut(s)	100, 723, 932, 1171
TasI	AATT	6 cut(s)	210, 393, 465, 519, 821, 1211
TatI	WGTACW	1 cut(s)	738
TfiI	GAWTC	4 cut(s)	61, 524, 671, 1195
Tru1I	TTAA	5 cut(s)	165, 276, 678, 1016, 1323
Tru9I	TTAA	5 cut(s)	165, 276, 678, 1016, 1323
TscAI	CASTG	5 cut(s)	181, 535, 931, 1067, 1114
TseFI	GTSAC	3 cut(s)	16, 172, 1232
TseI	GCWGC	2 cut(s)	92, 371
Tsp45I	GTSAC	3 cut(s)	16, 172, 1232
TspDTI	ATGAA	2 cut(s)	499, 540
TspGWI	ACGGA	1 cut(s)	1189
TspRI	CASTG	5 cut(s)	181, 535, 931, 1067, 1114
Van91I	CCANNNNNTGG	1 cut(s)	1052
VpaK11BI	GGWCC	3 cut(s)	449, 946, 1043
XapI	RAATTY	1 cut(s)	821
XbaI	TCTAGA	1 cut(s)	989
XceI	RCATGY	5 cut(s)	745, 1096, 1100, 1240, 1353
XhoI	CTCGAG	1 cut(s)	99
XmiI	GTMKAC	1 cut(s)	1085
XmnI	GAANNNNTTC	1 cut(s)	909
XspI	CTAG	1 cut(s)	990
Zsp2I	ATGCAT	3 cut(s)	988, 1098, 1355

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.