Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0002969

Physical Location & Seq

Genomic Coordinates Reverse (-)

21548381 .. 21553371

Gene Structure 4991 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG140100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

ATGGCTGGTGAAGTAGTGACTGTAAATGGAAATGGCAATGGAAACACCCAGCTGAATCCACAGAGGACTTACCAAGTTGTTGTGGCTGCAACTCGAGAAATGGGTATTGGAAAGGATGGGAAACTACCTTGGAAACTTCCTTCTGATCTCAAGTTCTTTAAGGATGTCACTGTAACCACATCAGATCCCGGAAAAAAGAATGCAATTATAATGGGCAGAAAAACATGGGAGAGCATTCCCCCTGAGCATCGGCCTCTACCTGGACGCCTTAATGTTGTTCTGACTCGTTCTGGGAGTTTTGATATAGCTACTGCAGAGAATGTCGTCATATGTGGGAGCATGGCCTCTGCTCTGGAGCTGTTAGCTGCTTCTCCTTACTGTCTGTCAATTGACAAAGTGTTTCTCATAGGAGGTGGCCAGATATTGAGGGAAGCTCTCAATGGGCCTGGCTGTGATGCAATTCACATTACAGAAATAGAGACCAACATTGAATGTGATACTTTCATCCCTGCAATTGATTCCACTGTATTTCAGCCCTGGTATTCATCTTTTCCCAAGGTGGAGAATAGCATTCGTTATTCCCTCACGACTTATGTGCGTGTGAGGAGTTCTGAAGTTGGATCCCTTTGTGAAAACAATGATCTGAACTGTAATAGTAGGTCGGATTCCATTAAGTGTGAGGTAAAGAAGTTCTCTTTCCTCCCCAAGATGATTTTCGAGAAACATGAGGAGTACATGTATCTAAATCTGGTTCAAGATATACTCTCAGATGGTACTTCTAAGGATGATAGGACTGGGACTGGTACTTTATCAAAATTTGGTTGCCAGATGAGGTTCAATCTGCGCAGAAGTTTTCCTCTTCTAACTACCAAGAAAGTATTTTGGCGAGGGGTTGTCGAAGAACTTCTGTGGTTCCTTAGTGGTTCAACCAATGCCAAGGTCCTTCAGGAGAAAGGCATCCGCATATGGGATGGAAATGCATCTAGAGACTACCTTGATAGCATTGGTTTAACTGGCAGGGAGGAGGGCGACTTAGGACCAGTTTATGGGTTCCAGTGGCGACACTTTGGTGCCAGGTATACTGACATGCATGCTGACTACACTGGCCAAGGATTTGACCAGTTGTTAGATGTTATTGACAAGATCAAAAATAATCCTGATGATCGACGGATTATACTTTCAGCCTGGAATCCTTCTGATCTGAAATTGATGGCACTTCCACCTTGTCACATGTTTGCTCAGTTCTATGTTGCAAAAGGAGAGTTATCATGCCAAATGTATCAGCGTTCTGCTGACATGGGCCTGGGCGTGCCATTTAACATCGCGTCATATTCGCTTCTGACATGCATGATTGCTCATGTCTGTGATCTTGTTCCAGGTGATTTCGTTCACGTTTTAGGGGATGCTCATGTTTACCGCACTCATATCAGGCCTCTGCAGGAGCAACTTCAGAAACTGCCCAAGCCTCTTCCAATTTTGAAGATCAACTCCGATAAAAAGAACATAGATTCATTTGTGGCAGCTGATTTCGAACTCATAGGTTATAATCCCCATGAGAAGATAGAAATGAAAATGGCTGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004146 GO:0004799 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006575 GO:0006725 GO:0006732 GO:0006760 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0009058 GO:0009108 GO:0009256 GO:0009257 GO:0009396 GO:0009987 GO:0016053 GO:0016491 GO:0016645 GO:0016646 GO:0016740 GO:0016741 GO:0018130 GO:0019438 GO:0019752 GO:0032259 GO:0034641 GO:0042083 GO:0042398 GO:0042558 GO:0042559 GO:0043436 GO:0043603 GO:0043604 GO:0043648 GO:0043650 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046483 GO:0046653 GO:0046654 GO:0051186 GO:0051188 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00240 ko00670 ko00790 ko01100 map00240 map00670 map00790 map01100

Pfam Domains

Protein Families

DHFR_1 Thymidylat_synt

Protein Analysis

527

Amino Acids

58.99

Weight (kDa)

6.44

Isoelectric Point (pI)

41.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DHFR_1	PF00186	25 - 200	1.1e-36	Dihydrofolate reductase
Thymidylat_synt	PF00303	246 - 527	2.3e-116	Thymidylate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002969)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16370 AT2G16370 AT2G16370 AT4G34570 AT4G34570 AT4G34570 AT4G34570
fragaria_vesca	FvH4_2g09370 FvH4_2g09370 FvH4_2g09370 FvH4_2g09370 FvH4_2g09370 FvH4_2g09370
malus_domestica	MD05G1063200.v1.1 MD10G1070700.v1.1
prunus_persica	Prupe.8G092500_v2.0.a1 Prupe.8G092500_v2.0.a1
pyrus_communis	pycom05g05460 pycom05g05470 pycom10g05650
rosa_chinensis	RchiOBHm_Chr6g0265641
rosa_laevigata	RLG00000014170
rosa_multiflora	Rmu_sc0003233.1_g000014 Rmu_sc0003233.1_g000015 Rmu_sc0009907.1_g000015
rosa_roxburghii	Rroxscaffold_175G00432460 Rroxscaffold_6G00388530 Rroxscaffold_7G00202550
rosa_rugosa	Rorug06G0018100
rosa_samantha	Rh1BG086900 Rh3BG370300 Rh3CG367200 Rh6AG140100 Rh6BG140000 Rh6CG137100 Rh6DG123400
rosa_wichuraiana	Rw6G012050 Rw6G012100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	209, 1545
Acc16I	TGCGCA	1 cut(s)	845
AccB1I	GGYRCC	1 cut(s)	1070
AccB7I	CCANNNNNTGG	1 cut(s)	1046
AccI	GTMKAC	1 cut(s)	1079
AccII	CGCG	1 cut(s)	1325
AciI	CCGC	2 cut(s)	961, 1417
AclWI	GGATC	3 cut(s)	179, 615, 628
AcoI	YGGCCR	2 cut(s)	415, 1105
AcsI	RAATTY	1 cut(s)	815
AcuI	CTGAAG	3 cut(s)	633, 929, 1433
AcyI	GRCGYC	1 cut(s)	265
AfaI	GTAC	3 cut(s)	734, 775, 805
AfiI	CCNNNNNNNGG	3 cut(s)	260, 967, 1046
AflIII	ACRYGT	2 cut(s)	735, 1230
AgsI	TTSAA	5 cut(s)	491, 755, 838, 927, 1480
AjnI	CCWGG	7 cut(s)	259, 445, 536, 1073, 1184, 1302, 1375
AjuI	GAANNNNNNNTTGG	4 cut(s)	90, 122, 698, 730
AleI	CACNNNNGTG	1 cut(s)	1068
AluBI	AGCT	6 cut(s)	52, 308, 358, 365, 434, 1523
AluI	AGCT	6 cut(s)	52, 308, 358, 365, 434, 1523
Alw26I	GTCTC	2 cut(s)	473, 981
AlwI	GGATC	3 cut(s)	179, 615, 628
AlwNI	CAGNNNCTG	1 cut(s)	1456
Ama87I	CYCGRG	1 cut(s)	93
AoxI	GGCC	7 cut(s)	251, 342, 415, 443, 1105, 1300, 1430
ApeKI	GCWGC	3 cut(s)	86, 365, 1520
ApoI	RAATTY	1 cut(s)	815
Asp700I	GAANNNNTTC	1 cut(s)	903
AspLEI	GCGC	1 cut(s)	846
AspS9I	GGNCC	4 cut(s)	443, 940, 1037, 1300
AsuC2I	CCSGG	1 cut(s)	189
AsuHPI	GGTGA	2 cut(s)	20, 1391
AsuII	TTCGAA	1 cut(s)	1530
AvaI	CYCGRG	1 cut(s)	93
AvaII	GGWCC	2 cut(s)	940, 1037
BalI	TGGCCA	2 cut(s)	417, 1107
BamHI	GGATCC	1 cut(s)	620
BanI	GGYRCC	1 cut(s)	1070
BbvI	GCAGC	3 cut(s)	73, 352, 1532
BccI	CCATC	4 cut(s)	110, 764, 965, 1204
BcgI	CGANNNNNNTGC	2 cut(s)	577, 611
BciT130I	CCWGG	7 cut(s)	261, 447, 538, 1075, 1186, 1304, 1377
BcnI	CCSGG	1 cut(s)	189
BcoDI	GTCTC	2 cut(s)	473, 981
BfaI	CTAG	1 cut(s)	984
BfmI	CTRYAG	2 cut(s)	312, 1436
BisI	GCNGC	3 cut(s)	87, 366, 1521
BlsI	GCNGC	3 cut(s)	88, 367, 1522
Bme1390I	CCNGG	8 cut(s)	189, 261, 447, 538, 1075, 1186, 1304, 1377
Bme18I	GGWCC	2 cut(s)	940, 1037
BmeT110I	CYCGRG	1 cut(s)	93
BmgT120I	GGNCC	4 cut(s)	443, 940, 1037, 1300
BmiI	GGNNCC	4 cut(s)	622, 914, 1052, 1072
BmrFI	CCNGG	8 cut(s)	189, 261, 447, 538, 1075, 1186, 1304, 1377
BmrI	ACTGGG	1 cut(s)	804
BmsI	GCATC	5 cut(s)	256, 445, 966, 989, 1393
BmuI	ACTGGG	1 cut(s)	804
BplI	GAGNNNNNCTC	2 cut(s)	418, 450
BpmI	CTGGAG	1 cut(s)	374
Bpu10I	CCTNAGC	1 cut(s)	243
Bpu14I	TTCGAA	1 cut(s)	1530
BpuEI	CTTGAG	1 cut(s)	134
BpuMI	CCSGG	1 cut(s)	189
BsaHI	GRCGYC	1 cut(s)	265
BsaI	GGTCTC	1 cut(s)	473
BsaJI	CCNNGG	6 cut(s)	128, 536, 555, 936, 1108, 1303
BsaXI	ACNNNNNCTCC	2 cut(s)	722, 752
Bsc4I	CCNNNNNNNGG	3 cut(s)	260, 967, 1046
Bse1I	ACTGG	7 cut(s)	799, 805, 1018, 1040, 1054, 1108, 1120
Bse3DI	GCAATG	1 cut(s)	43
BseBI	CCWGG	7 cut(s)	261, 447, 538, 1075, 1186, 1304, 1377
BseDI	CCNNGG	6 cut(s)	128, 536, 555, 936, 1108, 1303
BseGI	GGATG	7 cut(s)	121, 169, 504, 790, 957, 976, 1408
BseLI	CCNNNNNNNGG	3 cut(s)	260, 967, 1046
BseMI	GCAATG	1 cut(s)	43
BseMII	CTCAG	3 cut(s)	234, 780, 1253
BseNI	ACTGG	7 cut(s)	799, 805, 1018, 1040, 1054, 1108, 1120
BseRI	GAGGAG	3 cut(s)	619, 743, 1037
BseXI	GCAGC	3 cut(s)	73, 352, 1532
BseYI	CCCAGC	1 cut(s)	48
Bsh1236I	CGCG	1 cut(s)	1325
BshFI	GGCC	7 cut(s)	253, 344, 417, 445, 1107, 1302, 1432
BshNI	GGYRCC	1 cut(s)	1070
BsiHKCI	CYCGRG	1 cut(s)	93
BsiSI	CCGG	1 cut(s)	189
BslFI	GGGAC	1 cut(s)	811
BslI	CCNNNNNNNGG	3 cut(s)	260, 967, 1046
BsmAI	GTCTC	2 cut(s)	473, 981
BsmFI	GGGAC	1 cut(s)	811
BsmI	GAATGC	3 cut(s)	205, 234, 570
BsnI	GGCC	7 cut(s)	253, 344, 417, 445, 1107, 1302, 1432
Bso31I	GGTCTC	1 cut(s)	473
BsoBI	CYCGRG	1 cut(s)	93
Bsp119I	TTCGAA	1 cut(s)	1530
Bsp143I	GATC	9 cut(s)	145, 184, 620, 640, 1143, 1162, 1198, 1366, 1482
BspACI	CCGC	2 cut(s)	961, 1417
BspANI	GGCC	7 cut(s)	253, 344, 417, 445, 1107, 1302, 1432
BspCNI	CTCAG	3 cut(s)	235, 779, 1252
BspFNI	CGCG	1 cut(s)	1325
BspLI	GGNNCC	4 cut(s)	622, 914, 1052, 1072
BspMAI	CTGCAG	2 cut(s)	316, 1440
BspPI	GGATC	3 cut(s)	179, 615, 628
BspT104I	TTCGAA	1 cut(s)	1530
BspT107I	GGYRCC	1 cut(s)	1070
BspTNI	GGTCTC	1 cut(s)	473
BsrDI	GCAATG	1 cut(s)	43
BsrI	ACTGG	7 cut(s)	799, 805, 1018, 1040, 1054, 1108, 1120
BssECI	CCNNGG	6 cut(s)	128, 536, 555, 936, 1108, 1303
BssMI	GATC	9 cut(s)	145, 184, 620, 640, 1143, 1162, 1198, 1366, 1482
BssNAI	GTATAC	1 cut(s)	1080
BssNI	GRCGYC	1 cut(s)	265
BssT1I	CCWWGG	4 cut(s)	128, 555, 936, 1108
Bst1107I	GTATAC	1 cut(s)	1080
Bst2UI	CCWGG	7 cut(s)	261, 447, 538, 1075, 1186, 1304, 1377
Bst4CI	ACNGT	5 cut(s)	22, 172, 380, 526, 650
Bst6I	CTCTTC	2 cut(s)	864, 1473
BstACI	GRCGYC	1 cut(s)	265
BstBI	TTCGAA	1 cut(s)	1530
BstC8I	GCNNGC	2 cut(s)	1092, 1310
BstDEI	CTNAG	6 cut(s)	243, 766, 780, 917, 1033, 1239
BstF5I	GGATG	7 cut(s)	121, 169, 504, 790, 957, 976, 1408
BstFNI	CGCG	1 cut(s)	1325
BstHHI	GCGC	1 cut(s)	846
BstKTI	GATC	9 cut(s)	148, 187, 623, 643, 1146, 1165, 1201, 1369, 1485
BstMAI	GTCTC	2 cut(s)	473, 981
BstMBI	GATC	9 cut(s)	145, 184, 620, 640, 1143, 1162, 1198, 1366, 1482
BstNI	CCWGG	7 cut(s)	261, 447, 538, 1075, 1186, 1304, 1377
BstNSI	RCATGY	5 cut(s)	739, 1090, 1094, 1234, 1347
BstSCI	CCNGG	8 cut(s)	187, 259, 445, 536, 1073, 1184, 1302, 1375
BstSFI	CTRYAG	2 cut(s)	312, 1436
BstUI	CGCG	1 cut(s)	1325
BstV1I	GCAGC	3 cut(s)	73, 352, 1532
BstX2I	RGATCY	2 cut(s)	184, 620
BstYI	RGATCY	2 cut(s)	184, 620
BstZ17I	GTATAC	1 cut(s)	1080
BsuRI	GGCC	7 cut(s)	253, 344, 417, 445, 1107, 1302, 1432
BtgZI	GCGATG	1 cut(s)	1306
BtsCI	GGATG	7 cut(s)	121, 169, 504, 790, 957, 976, 1408
BtsIMutI	CAGTG	4 cut(s)	168, 522, 1061, 1101
Cac8I	GCNNGC	2 cut(s)	1092, 1310
CaiI	CAGNNNCTG	1 cut(s)	1456
CfoI	GCGC	1 cut(s)	846
Cfr13I	GGNCC	4 cut(s)	443, 940, 1037, 1300
CseI	GACGC	2 cut(s)	273, 1314
Csp6I	GTAC	3 cut(s)	733, 774, 804
CviQI	GTAC	3 cut(s)	733, 774, 804
DdeI	CTNAG	6 cut(s)	243, 766, 780, 917, 1033, 1239
DpnI	GATC	9 cut(s)	147, 186, 622, 642, 1145, 1164, 1200, 1368, 1484
DpnII	GATC	9 cut(s)	145, 184, 620, 640, 1143, 1162, 1198, 1366, 1482
EaeI	YGGCCR	2 cut(s)	415, 1105
Eam1104I	CTCTTC	2 cut(s)	864, 1473
EarI	CTCTTC	2 cut(s)	864, 1473
Eco130I	CCWWGG	4 cut(s)	128, 555, 936, 1108
Eco147I	AGGCCT	1 cut(s)	1432
Eco31I	GGTCTC	1 cut(s)	473
Eco47I	GGWCC	2 cut(s)	940, 1037
Eco57I	CTGAAG	3 cut(s)	633, 929, 1433
Eco88I	CYCGRG	1 cut(s)	93
EcoO109I	RGGNCCY	1 cut(s)	940
EcoRII	CCWGG	7 cut(s)	259, 445, 536, 1073, 1184, 1302, 1375
EcoT14I	CCWWGG	4 cut(s)	128, 555, 936, 1108
EcoT22I	ATGCAT	3 cut(s)	982, 1092, 1349
ErhI	CCWWGG	4 cut(s)	128, 555, 936, 1108
FaqI	GGGAC	1 cut(s)	811
FauNDI	CATATG	2 cut(s)	329, 965
FblI	GTMKAC	1 cut(s)	1079
Fnu4HI	GCNGC	3 cut(s)	87, 366, 1521
FokI	GGATG	7 cut(s)	128, 176, 491, 797, 944, 983, 1415
Fsp4HI	GCNGC	3 cut(s)	87, 366, 1521
FspBI	CTAG	1 cut(s)	984
FspI	TGCGCA	1 cut(s)	845
GlaI	GCGC	1 cut(s)	845
GluI	GCNGC	3 cut(s)	87, 366, 1521
GsaI	CCCAGC	1 cut(s)	52
GsuI	CTGGAG	1 cut(s)	374
HaeIII	GGCC	7 cut(s)	253, 344, 417, 445, 1107, 1302, 1432
HapII	CCGG	1 cut(s)	189
HgaI	GACGC	2 cut(s)	273, 1314
HhaI	GCGC	1 cut(s)	846
Hin1I	GRCGYC	1 cut(s)	265
Hin6I	GCGC	1 cut(s)	844
HinP1I	GCGC	1 cut(s)	844
HinfI	GANTC	6 cut(s)	55, 283, 518, 665, 1189, 1508
HpaII	CCGG	1 cut(s)	189
HphI	GGTGA	2 cut(s)	20, 1391
Hpy166II	GTNNAC	3 cut(s)	1080, 1390, 1414
Hpy188III	TCNNGA	8 cut(s)	95, 353, 586, 718, 755, 947, 984, 1157
Hpy8I	GTNNAC	3 cut(s)	1080, 1390, 1414
Hpy99I	CGWCG	1 cut(s)	1170
HpyAV	CCTTC	3 cut(s)	150, 953, 1203
HpyCH4III	ACNGT	5 cut(s)	22, 172, 380, 526, 650
HpyCH4IV	ACGT	1 cut(s)	1392
HpyF3I	CTNAG	6 cut(s)	243, 766, 780, 917, 1033, 1239
HpySE526I	ACGT	1 cut(s)	1392
Hsp92I	GRCGYC	1 cut(s)	265
HspAI	GCGC	1 cut(s)	844
Kzo9I	GATC	9 cut(s)	145, 184, 620, 640, 1143, 1162, 1198, 1366, 1482
LmnI	GCTCC	3 cut(s)	336, 355, 1441
Lsp1109I	GCAGC	3 cut(s)	73, 352, 1532
LweI	GCATC	5 cut(s)	256, 445, 966, 989, 1393
MaeI	CTAG	1 cut(s)	984
MaeII	ACGT	1 cut(s)	1392
MaeIII	GTNAC	4 cut(s)	16, 166, 172, 1226
MalI	GATC	9 cut(s)	147, 186, 622, 642, 1145, 1164, 1200, 1368, 1484
MboI	GATC	9 cut(s)	145, 184, 620, 640, 1143, 1162, 1198, 1366, 1482
MboII	GAAGA	5 cut(s)	851, 911, 1460, 1492, 1570
MfeI	CAATTG	2 cut(s)	387, 513
MflI	RGATCY	2 cut(s)	184, 620
MlsI	TGGCCA	2 cut(s)	417, 1107
MluCI	AATT	7 cut(s)	204, 387, 459, 513, 815, 1205, 1473
MluNI	TGGCCA	2 cut(s)	417, 1107
MlyI	GAGTC	1 cut(s)	277
MmeI	TCCRAC	2 cut(s)	598, 642
Mox20I	TGGCCA	2 cut(s)	417, 1107
Mph1103I	ATGCAT	3 cut(s)	982, 1092, 1349
MroXI	GAANNNNTTC	1 cut(s)	903
MscI	TGGCCA	2 cut(s)	417, 1107
MseI	TTAA	5 cut(s)	159, 270, 672, 1010, 1317
MslI	CAYNNNNRTG	2 cut(s)	1068, 1362
Msp20I	TGGCCA	2 cut(s)	417, 1107
MspA1I	CMGCKG	2 cut(s)	52, 1523
MspI	CCGG	1 cut(s)	189
MspR9I	CCNGG	8 cut(s)	189, 261, 447, 538, 1075, 1186, 1304, 1377
MunI	CAATTG	2 cut(s)	387, 513
Mva1269I	GAATGC	3 cut(s)	205, 234, 570
MvaI	CCWGG	7 cut(s)	261, 447, 538, 1075, 1186, 1304, 1377
MvnI	CGCG	1 cut(s)	1325
NciI	CCSGG	1 cut(s)	189
NdeI	CATATG	2 cut(s)	329, 965
NdeII	GATC	9 cut(s)	145, 184, 620, 640, 1143, 1162, 1198, 1366, 1482
NlaIV	GGNNCC	4 cut(s)	622, 914, 1052, 1072
NmuCI	GTSAC	3 cut(s)	16, 166, 1226
NsbI	TGCGCA	1 cut(s)	845
NsiI	ATGCAT	3 cut(s)	982, 1092, 1349
NspI	RCATGY	5 cut(s)	739, 1090, 1094, 1234, 1347
NspV	TTCGAA	1 cut(s)	1530
OliI	CACNNNNGTG	1 cut(s)	1068
PaeI	GCATGC	1 cut(s)	1094
PaeR7I	CTCGAG	1 cut(s)	93
PceI	AGGCCT	1 cut(s)	1432
PciI	ACATGT	2 cut(s)	735, 1230
PctI	GAATGC	3 cut(s)	205, 234, 570
PdmI	GAANNNNTTC	1 cut(s)	903
PfeI	GAWTC	5 cut(s)	55, 518, 665, 1189, 1508
PflMI	CCANNNNNTGG	1 cut(s)	1046
PfoI	TCCNGGA	1 cut(s)	187
PkrI	GCNGC	3 cut(s)	88, 367, 1522
PleI	GAGTC	1 cut(s)	277
PpsI	GAGTC	1 cut(s)	277
PpuMI	RGGWCCY	1 cut(s)	940
PscI	ACATGT	2 cut(s)	735, 1230
PsiI	TTATAA	2 cut(s)	209, 1545
Psp5II	RGGWCCY	1 cut(s)	940
Psp6I	CCWGG	7 cut(s)	259, 445, 536, 1073, 1184, 1302, 1375
PspFI	CCCAGC	1 cut(s)	48
PspGI	CCWGG	7 cut(s)	259, 445, 536, 1073, 1184, 1302, 1375
PspN4I	GGNNCC	4 cut(s)	622, 914, 1052, 1072
PspPI	GGNCC	4 cut(s)	443, 940, 1037, 1300
PspPPI	RGGWCCY	1 cut(s)	940
PstI	CTGCAG	2 cut(s)	316, 1440
PstNI	CAGNNNCTG	1 cut(s)	1456
PsuI	RGATCY	2 cut(s)	184, 620
PvuII	CAGCTG	2 cut(s)	52, 1523
RsaI	GTAC	3 cut(s)	734, 775, 805
RsaNI	GTAC	3 cut(s)	733, 774, 804
RseI	CAYNNNNRTG	2 cut(s)	1068, 1362
SaqAI	TTAA	5 cut(s)	159, 270, 672, 1010, 1317
SatI	GCNGC	3 cut(s)	87, 366, 1521
Sau3AI	GATC	9 cut(s)	145, 184, 620, 640, 1143, 1162, 1198, 1366, 1482
Sau96I	GGNCC	4 cut(s)	443, 940, 1037, 1300
SchI	GAGTC	1 cut(s)	277
ScrFI	CCNGG	8 cut(s)	189, 261, 447, 538, 1075, 1186, 1304, 1377
SfaNI	GCATC	5 cut(s)	256, 445, 966, 989, 1393
SfcI	CTRYAG	2 cut(s)	312, 1436
Sfr274I	CTCGAG	1 cut(s)	93
SfuI	TTCGAA	1 cut(s)	1530
SinI	GGWCC	2 cut(s)	940, 1037
SlaI	CTCGAG	1 cut(s)	93
SmiMI	CAYNNNNRTG	2 cut(s)	1068, 1362
SmlI	CTYRAG	2 cut(s)	93, 149
SmoI	CTYRAG	2 cut(s)	93, 149
SphI	GCATGC	1 cut(s)	1094
Sse9I	AATT	7 cut(s)	204, 387, 459, 513, 815, 1205, 1473
SseBI	AGGCCT	1 cut(s)	1432
SsiI	CCGC	2 cut(s)	961, 1417
SspMI	CTAG	1 cut(s)	984
StuI	AGGCCT	1 cut(s)	1432
StyD4I	CCNGG	8 cut(s)	187, 259, 445, 536, 1073, 1184, 1302, 1375
StyI	CCWWGG	4 cut(s)	128, 555, 936, 1108
TaaI	ACNGT	5 cut(s)	22, 172, 380, 526, 650
TaiI	ACGT	1 cut(s)	1395
TaqI	TCGA	5 cut(s)	94, 717, 897, 1165, 1530
TasI	AATT	7 cut(s)	204, 387, 459, 513, 815, 1205, 1473
TatI	WGTACW	1 cut(s)	732
TfiI	GAWTC	5 cut(s)	55, 518, 665, 1189, 1508
Tru1I	TTAA	5 cut(s)	159, 270, 672, 1010, 1317
Tru9I	TTAA	5 cut(s)	159, 270, 672, 1010, 1317
TscAI	CASTG	4 cut(s)	175, 529, 1061, 1108
TseFI	GTSAC	3 cut(s)	16, 166, 1226
TseI	GCWGC	3 cut(s)	86, 365, 1520
Tsp45I	GTSAC	3 cut(s)	16, 166, 1226
TspDTI	ATGAA	4 cut(s)	493, 534, 1500, 1583
TspGWI	ACGGA	1 cut(s)	1183
TspRI	CASTG	4 cut(s)	175, 529, 1061, 1108
Van91I	CCANNNNNTGG	1 cut(s)	1046
VpaK11BI	GGWCC	2 cut(s)	940, 1037
XapI	RAATTY	1 cut(s)	815
XbaI	TCTAGA	1 cut(s)	983
XceI	RCATGY	5 cut(s)	739, 1090, 1094, 1234, 1347
XhoI	CTCGAG	1 cut(s)	93
XmiI	GTMKAC	1 cut(s)	1079
XmnI	GAANNNNTTC	1 cut(s)	903
XspI	CTAG	1 cut(s)	984
Zsp2I	ATGCAT	3 cut(s)	982, 1092, 1349

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.