AT2G16390

SNF2 domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0001815
Physical Location & Seq
Forward (+)
7097280 .. 7101351
4072 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G16390.1

Sequence Viewer

Length: 2667 bp
ATGGGTTTTGTTTACATTGTGATGACAGGGTACTATAAGAATGTGCATAAAAGAAAGCAAAATCAAGTTGATGATGGACCTGAAGCAAAGCGGGTCAAGAGTTCAGCCAAAGTTATTGATTACTCTAACCCATTTGCAGTTAGTAACATGCTTGAAGCTTTAGATAGTGGTAAATTTGGGAGTGTTAGTAAAGAGTTGGAAGAGATAGCTGATATGAGGATGGATTTGGTTAAGCGTTCTATTTGGTTATACCCGTCGCTAGCGTATACCGTGTTTGAAGCTGAGAAGACGATGGATAATCAACAGGTTGTGGAAGGTGTTATTAATTTGGATGATGATGATGATGATGATACTGATGTGGAGAAGAAAGCTCTCTGTGTTGTTCCTTCGTCGTCTGAGATTGTGCTTCTTGATTCTGATGATGAAGACAATGAGAGGCAGAGGCCTATGTATCAGTTTCAGTCTACTCTTGTACAGCATCAGAAGAATCAAGGGGATGTGACTCCATTAATACCGCAATGCTCTTTCGAGGAGGTCGATTTAGGGAGGGGCAAGGAGATGCCTTCTGCCATTAAAGCCATTGTTGAGGGACAAACAAGTAGAGGCAAAGTCCTTCCTATAGAAAATGGTGTGGTTAATGAGAAAGGTGTCTACGTGGGCGTTGAGGAGGATGACAGTGATAATGAGTCTGAAGCAGCAGATGAAGATCTTGGTAATATCTGGAATGAAATGGCCTTGTCAATAGAGTGTTCCAAGGATGTAGCAAGGGAGACTTCACATAAGGAAAAGGCAGATGTAGTGGAAGATTGTGAGCACTCATTTATTCTAAAGGACGATATGGGTTATGTTTGCCGTGTCTGCGGAGTTATTGAGAAAAGTATACTAGAGATAATTGATGTGCAATTCACTAAAGCAAAACGAAACACAAGAACATATGCCTCTGAAACTAGAACTAAAAGGTTTGGCGAATCTGATAATGAACTTAAGTTTTCTGAAGAAGGGTTGATGATAGGTGGACTTGCTGCTCATCCAACGCATGCTGCCGAAATGAAGCCTCATCAAATTGAGGGATTTCAGTTCCTTTGCAGCAATTTAGTGGCTGACGATCCTGGTGGCTGTATCATGGCTCATGCTCCAGGCTCTGGAAAAACCTTCATGATCATCAGTTTTATGCAGAGCTTTCTTGCAAAGTATCCTCAGGCTAAGCCATTGGTTGTTCTCCCAAAAGGTATTCTGCCTACTTGGAAAAAAGAGTTCGTGAGATGGCAAGTTGAGGACATACCACTGCTTGATTTCTATAGTGCTAAAGCAGAGAACCGGGCACAGCAGCTGTCTATTTTGAAACAGTGGATGGAGAAGAAGAGTATCTTATTTCTTGGGTACCAGCAGTTCTCAACTATTGTGTGTGATGATACAACCGACTCACTTTCTTGCCAGGAGATACTGCTCAAGGTACCTTCGATCCTCATTTTGGATGAAGGACACACTCCAAGGAATGAGGACACAAATTTATTGCAGTCACTTGCCCAAGTCCAAACACCAAGAAAAGTTGTCCTCTCAGGAACGCTTTATCAGAACCATGTAAAGGAGGTTTTCAACATTCTGAACCTTGTTCGACCCAAATTCCTCAAATTGGATACCTCCAAATCTGCTGTGAAGAGAATCTTGGCTTATACTCCATGCGATGTCAGGGGGAGACTTACTGGAAGTAATTCAGATATGGCTTCAATGTTCAATGAAACTGTGGAGCACACCCTGCAGAAGAGCGAGGATTTCACAGTGAAAATTAAAGTAATCCAAGATTTGCGGGAGATGACAAAGAAAGTGCTTCATTACTATAAAGGAGATTTCCTAGATGAGCTTCCTGGACTTGCTGATTTCACTGTGGTTCTTAATCTGTCTCCAAAGCAGTTGAACGAAGTGAAGAAGTTAAGACGTGAGAAGAGAAAATTTAAGGTTTCGGCTGTGGGAAGTGCAATTTACCTTCACCCGAAGCTGAAAGTTTTCTCTGACAAGTCTGATGATGTTTCTGATACAACTATGGACGAAATGGTAGAGAAGCTAGATTTGAATGAAGGCGTCAAAGCAAAGTTCTTCCTTAACTTGATAAACCTGTGCGACTCAGCTGGTGAAAAGCTCTTGGTTTTCAGCCAGTATCTCATTCCACTAAAGTTTCTTGAAAGACTAGCTGCTTTAGCTAAGGGATGGAAACTAGGGAAAGAAGTTTTTGTTCTTACAGGCAATACCAGTTCTGAGCAGCGTGAGTGGTCAATGGAAACGTTTAACAGTTCGCCAGACGCCAAAATATTCTTTGGTTCGATAAAAGCATGTGGAGAAGGTATCTCGCTTGTTGGAGCATCTCGCATACTAATATTGGATGTTCCCCTAAACCCTTCTGTGACCCGCCAAGCTATTGGGCGAGCGTTTCGACCCGGACAAAAGAAGATGGTGCATGCATATAGATTGATTGCTGGGTCATCACCTGAGGAAGAGGATCACAACACTTGTTTCAAAAAGGAAGTCATCTCAAAGATGTGGTTCGAGTGGAACGAGTACTGCGGATATCAAAACTTTGAGGTAGAGACGATCGATGTGGATGAAGCTGGTGATACGTTCCTCGAAAGTCCTGCCTTAAGAGAAGACATAAGAGTTCTCTACAAAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000419 GO:0000428 GO:0000775 GO:0000785 GO:0000790 GO:0000792 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0005694 GO:0005720 GO:0005721 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0014070 GO:0016043 GO:0016070 GO:0016458 GO:0019222 GO:0030880 GO:0031047 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031618 GO:0031974 GO:0031981 GO:0032259 GO:0032268 GO:0032270 GO:0032776 GO:0032991 GO:0033043 GO:0033044 GO:0034641 GO:0035561 GO:0035563 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043330 GO:0043331 GO:0043412 GO:0043414 GO:0043954 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044728 GO:0044798 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051098 GO:0051099 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051276 GO:0051570 GO:0051574 GO:0051704 GO:0051707 GO:0051716 GO:0055029 GO:0060147 GO:0060148 GO:0060255 GO:0060964 GO:0060966 GO:0060968 GO:0061695 GO:0065007 GO:0065009 GO:0070013 GO:0070827 GO:0070828 GO:0070829 GO:0070887 GO:0071310 GO:0071359 GO:0071360 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0090577 GO:0098542 GO:0098687 GO:1900109 GO:1900111 GO:1900368 GO:1900370 GO:1901360 GO:1901698 GO:1901699 GO:1902275 GO:1902494 GO:1905269 GO:1990234 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

888

Amino Acids

100.23

Weight (kDa)

5.24

Isoelectric Point (pI)

36.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 349 - 522 9.4e-09 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 353 - 638 1.9e-25 SNF2-related domain
Helicase_C PF00271 698 - 812 2.1e-14 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 1380, 1453
AccB1I GGYRCC 2 cut(s) 1380, 1453
AccB7I CCANNNNNTGG 1 cut(s) 1142
AccI GTMKAC 4 cut(s) 266, 464, 651, 880
AciI CCGC 6 cut(s) 91, 515, 861, 1807, 2404, 2559
AclI AACGTT 1 cut(s) 2279
AclWI GGATC 3 cut(s) 1100, 1456, 2502
AcsI RAATTY 4 cut(s) 173, 1507, 1622, 1949
AcuI CTGAAG 3 cut(s) 102, 711, 1014
AcyI GRCGYC 2 cut(s) 2079, 2298
AfaI GTAC 5 cut(s) 32, 474, 1382, 1455, 2555
AfiI CCNNNNNNNGG 4 cut(s) 1142, 1471, 1585, 1633
AflII CTTAAG 2 cut(s) 983, 2632
AjiI CACGTC 1 cut(s) 1937
AjnI CCWGG 4 cut(s) 1108, 1135, 1434, 1864
AjuI GAANNNNNNNTTGG 2 cut(s) 1649, 1681
Alw21I GWGCWC 2 cut(s) 816, 1752
Alw26I GTCTC 4 cut(s) 764, 1690, 1905, 2576
AlwI GGATC 3 cut(s) 1100, 1456, 2502
AlwNI CAGNNNCTG 2 cut(s) 1142, 1330
AoxI GGCC 2 cut(s) 443, 732
ApeKI GCWGC 7 cut(s) 695, 1022, 1040, 1086, 1327, 2189, 2257
ApoI RAATTY 4 cut(s) 173, 1507, 1622, 1949
ArsI GACNNNNNNTTYG 2 cut(s) 2505, 2537
AseI ATTAAT 2 cut(s) 324, 509
Asp700I GAANNNNTTC 2 cut(s) 1711, 2003
Asp718I GGTACC 2 cut(s) 1380, 1453
AspS9I GGNCC 1 cut(s) 77
AsuC2I CCSGG 2 cut(s) 1319, 2433
AsuHPI GGTGA 4 cut(s) 1979, 2141, 2472, 2618
AsuNHI GCTAGC 1 cut(s) 259
AvaII GGWCC 1 cut(s) 77
AxyI CCTNAGG 2 cut(s) 1197, 2484
BaeGI GKGCMC 1 cut(s) 1324
BaeI ACNNNNGTAYC 2 cut(s) 342, 375
BanI GGYRCC 2 cut(s) 1380, 1453
BbsI GAAGAC 3 cut(s) 293, 432, 2646
Bbv12I GWGCWC 2 cut(s) 816, 1752
BbvI GCAGC 7 cut(s) 707, 1009, 1027, 1098, 1339, 2176, 2269
BccI CCATC 7 cut(s) 68, 214, 286, 1257, 1345, 2199, 2440
BceAI ACGGC 1 cut(s) 837
BcgI CGANNNNNNTGC 2 cut(s) 2609, 2643
BciT130I CCWGG 4 cut(s) 1110, 1137, 1436, 1866
BciVI GTATCC 2 cut(s) 1203, 1630
BclI TGATCA 1 cut(s) 1158
BcnI CCSGG 2 cut(s) 1319, 2433
BcoDI GTCTC 4 cut(s) 764, 1690, 1905, 2576
BfaI CTAG 7 cut(s) 260, 884, 948, 1853, 2063, 2186, 2213
BfmI CTRYAG 3 cut(s) 618, 1297, 1757
BfrI CTTAAG 2 cut(s) 983, 2632
BfuI GTATCC 2 cut(s) 1203, 1630
BglII AGATCT 1 cut(s) 706
BisI GCNGC 7 cut(s) 696, 1023, 1041, 1087, 1328, 2190, 2258
BlpI GCTNAGC 1 cut(s) 1203
BlsI GCNGC 7 cut(s) 697, 1024, 1042, 1088, 1329, 2191, 2259
BmcAI AGTACT 1 cut(s) 2555
Bme1390I CCNGG 6 cut(s) 1110, 1137, 1319, 1436, 1866, 2433
Bme18I GGWCC 1 cut(s) 77
BmgBI CACGTC 1 cut(s) 1937
BmgT120I GGNCC 1 cut(s) 77
BmiI GGNNCC 2 cut(s) 1382, 1455
BmrFI CCNGG 6 cut(s) 1110, 1137, 1319, 1436, 1866, 2433
BmsI GCATC 3 cut(s) 487, 549, 2366
BmtI GCTAGC 1 cut(s) 263
BpiI GAAGAC 3 cut(s) 293, 432, 2646
BpmI CTGGAG 1 cut(s) 1119
Bpu10I CCTNAGC 1 cut(s) 2199
Bpu1102I GCTNAGC 1 cut(s) 1203
BpuEI CTTGAG 1 cut(s) 1433
BpuMI CCSGG 2 cut(s) 1319, 2433
Bsa29I ATCGAT 1 cut(s) 2589
BsaAI YACGTR 1 cut(s) 655
BsaBI GATNNNNATC 1 cut(s) 705
BsaHI GRCGYC 2 cut(s) 2079, 2298
BsaJI CCNNGG 2 cut(s) 753, 1490
BsaXI ACNNNNNCTCC 2 cut(s) 172, 202
Bsc4I CCNNNNNNNGG 4 cut(s) 1142, 1471, 1585, 1633
Bse1I ACTGG 3 cut(s) 1708, 2152, 2247
Bse21I CCTNAGG 2 cut(s) 1197, 2484
Bse3DI GCAATG 1 cut(s) 524
Bse8I GATNNNNATC 1 cut(s) 705
BseBI CCWGG 4 cut(s) 1110, 1137, 1436, 1866
BseCI ATCGAT 1 cut(s) 2589
BseDI CCNNGG 2 cut(s) 753, 1490
BseJI GATNNNNATC 1 cut(s) 705
BseLI CCNNNNNNNGG 4 cut(s) 1142, 1471, 1585, 1633
BseMI GCAATG 1 cut(s) 524
BseMII CTCAG 7 cut(s) 273, 387, 1211, 1572, 2136, 2244, 2475
BseNI ACTGG 3 cut(s) 1708, 2152, 2247
BseRI GAGGAG 2 cut(s) 545, 680
BseSI GKGCMC 1 cut(s) 1324
BseXI GCAGC 7 cut(s) 707, 1009, 1027, 1098, 1339, 2176, 2269
BseYI CCCAGC 1 cut(s) 2471
Bsh1285I CGRYCG 1 cut(s) 2589
BshFI GGCC 2 cut(s) 445, 734
BshNI GGYRCC 2 cut(s) 1380, 1453
BshVI ATCGAT 1 cut(s) 2589
BsiEI CGRYCG 1 cut(s) 2589
BsiHKAI GWGCWC 2 cut(s) 816, 1752
BsiSI CCGG 2 cut(s) 1318, 2433
BslFI GGGAC 1 cut(s) 603
BslI CCNNNNNNNGG 4 cut(s) 1142, 1471, 1585, 1633
BsmAI GTCTC 4 cut(s) 764, 1690, 1905, 2576
BsmBI CGTCTC 1 cut(s) 2576
BsmFI GGGAC 1 cut(s) 603
BsnI GGCC 2 cut(s) 445, 734
Bsp1286I GDGCHC 3 cut(s) 816, 1324, 1752
Bsp1407I TGTACA 1 cut(s) 472
Bsp143I GATC 6 cut(s) 706, 1105, 1158, 1461, 2494, 2586
Bsp1720I GCTNAGC 1 cut(s) 1203
BspACI CCGC 6 cut(s) 91, 515, 861, 1807, 2404, 2559
BspANI GGCC 2 cut(s) 445, 734
BspCNI CTCAG 7 cut(s) 274, 388, 1210, 1571, 2135, 2245, 2476
BspDI ATCGAT 1 cut(s) 2589
BspHI TCATGA 1 cut(s) 1155
BspLI GGNNCC 2 cut(s) 1382, 1455
BspMAI CTGCAG 1 cut(s) 1761
BspOI GCTAGC 1 cut(s) 263
BspPI GGATC 3 cut(s) 1100, 1456, 2502
BspQI GCTCTTC 1 cut(s) 1757
BspT107I GGYRCC 2 cut(s) 1380, 1453
BspTI CTTAAG 2 cut(s) 983, 2632
BsrDI GCAATG 1 cut(s) 524
BsrGI TGTACA 1 cut(s) 472
BsrI ACTGG 3 cut(s) 1708, 2152, 2247
BssECI CCNNGG 2 cut(s) 753, 1490
BssMI GATC 6 cut(s) 706, 1105, 1158, 1461, 2494, 2586
BssNAI GTATAC 2 cut(s) 267, 881
BssNI GRCGYC 2 cut(s) 2079, 2298
BssT1I CCWWGG 2 cut(s) 753, 1490
Bst1107I GTATAC 2 cut(s) 267, 881
Bst2UI CCWGG 4 cut(s) 1110, 1137, 1436, 1866
Bst4CI ACNGT 7 cut(s) 271, 677, 1347, 1744, 1780, 1885, 2288
Bst6I CTCTTC 6 cut(s) 195, 1355, 1652, 1757, 1937, 2484
BstACI GRCGYC 2 cut(s) 2079, 2298
BstAFI CTTAAG 2 cut(s) 983, 2632
BstAPI GCANNNNNTGC 1 cut(s) 1756
BstAUI TGTACA 1 cut(s) 472
BstBAI YACGTR 1 cut(s) 655
BstC8I GCNNGC 4 cut(s) 261, 1038, 2421, 2454
BstDEI CTNAG 9 cut(s) 282, 396, 1197, 1203, 1558, 2122, 2199, 2253, 2484
BstKTI GATC 6 cut(s) 709, 1108, 1161, 1464, 2497, 2589
BstMAI GTCTC 4 cut(s) 764, 1690, 1905, 2576
BstMBI GATC 6 cut(s) 706, 1105, 1158, 1461, 2494, 2586
BstMCI CGRYCG 1 cut(s) 2589
BstMWI GCNNNNNNNGC 4 cut(s) 575, 858, 1756, 2195
BstNI CCWGG 4 cut(s) 1110, 1137, 1436, 1866
BstNSI RCATGY 4 cut(s) 151, 1040, 2331, 2456
BstSCI CCNGG 6 cut(s) 1108, 1135, 1317, 1434, 1864, 2431
BstSFI CTRYAG 3 cut(s) 618, 1297, 1757
BstSLI GKGCMC 1 cut(s) 1324
BstV1I GCAGC 7 cut(s) 707, 1009, 1027, 1098, 1339, 2176, 2269
BstV2I GAAGAC 3 cut(s) 293, 432, 2646
BstX2I RGATCY 1 cut(s) 706
BstXI CCANNNNNNTGG 1 cut(s) 2414
BstYI RGATCY 1 cut(s) 706
BstZ17I GTATAC 2 cut(s) 267, 881
Bsu15I ATCGAT 1 cut(s) 2589
Bsu36I CCTNAGG 2 cut(s) 1197, 2484
BsuI GTATCC 2 cut(s) 1203, 1630
BsuRI GGCC 2 cut(s) 445, 734
BsuTUI ATCGAT 1 cut(s) 2589
BtgZI GCGATG 1 cut(s) 1698
BtrI CACGTC 1 cut(s) 1937
BtsI GCAGTG 1 cut(s) 1283
BtsIMutI CAGTG 5 cut(s) 682, 1283, 1352, 1785, 1881
Cac8I GCNNGC 4 cut(s) 261, 1038, 2421, 2454
CaiI CAGNNNCTG 2 cut(s) 1142, 1330
CciI TCATGA 1 cut(s) 1155
Cfr13I GGNCC 1 cut(s) 77
ClaI ATCGAT 1 cut(s) 2589
CseI GACGC 2 cut(s) 2068, 2306
Csp6I GTAC 5 cut(s) 31, 473, 1381, 1454, 2554
CviAII CATG 9 cut(s) 148, 1037, 1123, 1130, 1156, 1580, 1680, 2328, 2453
CviQI GTAC 5 cut(s) 31, 473, 1381, 1454, 2554
DdeI CTNAG 9 cut(s) 282, 396, 1197, 1203, 1558, 2122, 2199, 2253, 2484
DpnI GATC 6 cut(s) 708, 1107, 1160, 1463, 2496, 2588
DpnII GATC 6 cut(s) 706, 1105, 1158, 1461, 2494, 2586
Eam1104I CTCTTC 6 cut(s) 195, 1355, 1652, 1757, 1937, 2484
EarI CTCTTC 6 cut(s) 195, 1355, 1652, 1757, 1937, 2484
Eco130I CCWWGG 2 cut(s) 753, 1490
Eco147I AGGCCT 1 cut(s) 445
Eco32I GATATC 1 cut(s) 2564
Eco47I GGWCC 1 cut(s) 77
Eco57I CTGAAG 3 cut(s) 102, 711, 1014
Eco81I CCTNAGG 2 cut(s) 1197, 2484
EcoRII CCWGG 4 cut(s) 1108, 1135, 1434, 1864
EcoRV GATATC 1 cut(s) 2564
EcoT14I CCWWGG 2 cut(s) 753, 1490
EcoT22I ATGCAT 1 cut(s) 2458
ErhI CCWWGG 2 cut(s) 753, 1490
Esp3I CGTCTC 1 cut(s) 2576
FaeI CATG 9 cut(s) 151, 1040, 1126, 1133, 1159, 1583, 1683, 2331, 2456
FalI AAGNNNNNCTT 6 cut(s) 757, 789, 1352, 1384, 1649, 1681
FaqI GGGAC 1 cut(s) 603
FatI CATG 9 cut(s) 147, 1036, 1122, 1129, 1155, 1579, 1679, 2327, 2452
FauI CCCGC 3 cut(s) 84, 1800, 2411
FauNDI CATATG 1 cut(s) 934
FbaI TGATCA 1 cut(s) 1158
FblI GTMKAC 4 cut(s) 266, 464, 651, 880
Fnu4HI GCNGC 7 cut(s) 696, 1023, 1041, 1087, 1328, 2190, 2258
Fsp4HI GCNGC 7 cut(s) 696, 1023, 1041, 1087, 1328, 2190, 2258
FspBI CTAG 7 cut(s) 260, 884, 948, 1853, 2063, 2186, 2213
GluI GCNGC 7 cut(s) 696, 1023, 1041, 1087, 1328, 2190, 2258
GsaI CCCAGC 1 cut(s) 2475
GsuI CTGGAG 1 cut(s) 1119
HaeIII GGCC 2 cut(s) 445, 734
HapII CCGG 2 cut(s) 1318, 2433
HgaI GACGC 2 cut(s) 2068, 2306
Hin1I GRCGYC 2 cut(s) 2079, 2298
Hin1II CATG 9 cut(s) 151, 1040, 1126, 1133, 1159, 1583, 1683, 2331, 2456
HindIII AAGCTT 1 cut(s) 156
HinfI GANTC 8 cut(s) 413, 487, 502, 686, 968, 1421, 1662, 2120
HpaII CCGG 2 cut(s) 1318, 2433
HphI GGTGA 4 cut(s) 1979, 2141, 2472, 2618
Hpy166II GTNNAC 6 cut(s) 13, 267, 465, 652, 881, 1016
Hpy188III TCNNGA 8 cut(s) 97, 410, 721, 1143, 1156, 1258, 1560, 2177
Hpy8I GTNNAC 6 cut(s) 13, 267, 465, 652, 881, 1016
Hpy99I CGWCG 2 cut(s) 259, 394
HpyCH4III ACNGT 7 cut(s) 271, 677, 1347, 1744, 1780, 1885, 2288
HpyCH4IV ACGT 4 cut(s) 654, 1936, 2279, 2612
HpyF10VI GCNNNNNNNGC 4 cut(s) 575, 858, 1756, 2195
HpyF3I CTNAG 9 cut(s) 282, 396, 1197, 1203, 1558, 2122, 2199, 2253, 2484
HpySE526I ACGT 4 cut(s) 654, 1936, 2279, 2612
Hsp92I GRCGYC 2 cut(s) 2079, 2298
Hsp92II CATG 9 cut(s) 151, 1040, 1126, 1133, 1159, 1583, 1683, 2331, 2456
KpnI GGTACC 2 cut(s) 1384, 1457
Ksp22I TGATCA 1 cut(s) 1158
Kzo9I GATC 6 cut(s) 706, 1105, 1158, 1461, 2494, 2586
LguI GCTCTTC 1 cut(s) 1757
LmnI GCTCC 3 cut(s) 1138, 1747, 2354
Lsp1109I GCAGC 7 cut(s) 707, 1009, 1027, 1098, 1339, 2176, 2269
LweI GCATC 3 cut(s) 487, 549, 2366
MaeI CTAG 7 cut(s) 260, 884, 948, 1853, 2063, 2186, 2213
MaeII ACGT 4 cut(s) 654, 1936, 2279, 2612
MaeIII GTNAC 4 cut(s) 143, 499, 1518, 2398
MalI GATC 6 cut(s) 708, 1107, 1160, 1463, 2496, 2588
MboI GATC 6 cut(s) 706, 1105, 1158, 1461, 2494, 2586
MflI RGATCY 1 cut(s) 706
MhlI GDGCHC 3 cut(s) 816, 1324, 1752
MlyI GAGTC 4 cut(s) 496, 695, 1415, 2114
MmeI TCCRAC 3 cut(s) 177, 1055, 2332
Mph1103I ATGCAT 1 cut(s) 2458
MroXI GAANNNNTTC 2 cut(s) 1711, 2003
MslI CAYNNNNRTG 1 cut(s) 20
MspA1I CMGCKG 2 cut(s) 1330, 2126
MspCI CTTAAG 2 cut(s) 983, 2632
MspI CCGG 2 cut(s) 1318, 2433
MspR9I CCNGG 6 cut(s) 1110, 1137, 1319, 1436, 1866, 2433
MvaI CCWGG 4 cut(s) 1110, 1137, 1436, 1866
MwoI GCNNNNNNNGC 4 cut(s) 575, 858, 1756, 2195
NciI CCSGG 2 cut(s) 1319, 2433
NdeI CATATG 1 cut(s) 934
NdeII GATC 6 cut(s) 706, 1105, 1158, 1461, 2494, 2586
NheI GCTAGC 1 cut(s) 259
NlaIII CATG 9 cut(s) 151, 1040, 1126, 1133, 1159, 1583, 1683, 2331, 2456
NlaIV GGNNCC 2 cut(s) 1382, 1455
NmuCI GTSAC 3 cut(s) 499, 1518, 2398
NsiI ATGCAT 1 cut(s) 2458
NspI RCATGY 4 cut(s) 151, 1040, 2331, 2456
PaeI GCATGC 2 cut(s) 1040, 2456
PagI TCATGA 1 cut(s) 1155
PceI AGGCCT 1 cut(s) 445
PciSI GCTCTTC 1 cut(s) 1757
PcsI WCGNNNNNNNCGW 2 cut(s) 534, 2547
PdmI GAANNNNTTC 2 cut(s) 1711, 2003
PfeI GAWTC 4 cut(s) 413, 487, 968, 1662
PflMI CCANNNNNTGG 1 cut(s) 1142
PfoI TCCNGGA 1 cut(s) 1864
PkrI GCNGC 7 cut(s) 697, 1024, 1042, 1088, 1329, 2191, 2259
Ple19I CGATCG 1 cut(s) 2589
PleI GAGTC 4 cut(s) 496, 694, 1415, 2114
PpsI GAGTC 4 cut(s) 496, 694, 1415, 2114
Ppu21I YACGTR 1 cut(s) 655
PshBI ATTAAT 2 cut(s) 324, 509
Psp1406I AACGTT 1 cut(s) 2279
Psp6I CCWGG 4 cut(s) 1108, 1135, 1434, 1864
PspFI CCCAGC 1 cut(s) 2471
PspGI CCWGG 4 cut(s) 1108, 1135, 1434, 1864
PspN4I GGNNCC 2 cut(s) 1382, 1455
PspPI GGNCC 1 cut(s) 77
PsrI GAACNNNNNNTAC 2 cut(s) 1373, 1405
PstI CTGCAG 1 cut(s) 1761
PstNI CAGNNNCTG 2 cut(s) 1142, 1330
PsuI RGATCY 1 cut(s) 706
PvuI CGATCG 1 cut(s) 2589
PvuII CAGCTG 2 cut(s) 1330, 2126
RsaI GTAC 5 cut(s) 32, 474, 1382, 1455, 2555
RsaNI GTAC 5 cut(s) 31, 473, 1381, 1454, 2554
RseI CAYNNNNRTG 1 cut(s) 20
SapI GCTCTTC 1 cut(s) 1757
SatI GCNGC 7 cut(s) 696, 1023, 1041, 1087, 1328, 2190, 2258
Sau3AI GATC 6 cut(s) 706, 1105, 1158, 1461, 2494, 2586
Sau96I GGNCC 1 cut(s) 77
ScaI AGTACT 1 cut(s) 2555
SchI GAGTC 4 cut(s) 496, 695, 1415, 2114
ScrFI CCNGG 6 cut(s) 1110, 1137, 1319, 1436, 1866, 2433
SduI GDGCHC 3 cut(s) 816, 1324, 1752
SfaNI GCATC 3 cut(s) 487, 549, 2366
SfcI CTRYAG 3 cut(s) 618, 1297, 1757
SinI GGWCC 1 cut(s) 77
SmiMI CAYNNNNRTG 1 cut(s) 20
SmlI CTYRAG 3 cut(s) 983, 1448, 2632
SmoI CTYRAG 3 cut(s) 983, 1448, 2632
SphI GCATGC 2 cut(s) 1040, 2456
SseBI AGGCCT 1 cut(s) 445
SsiI CCGC 6 cut(s) 91, 515, 861, 1807, 2404, 2559
SspI AATATT 2 cut(s) 2307, 2373
SspMI CTAG 7 cut(s) 260, 884, 948, 1853, 2063, 2186, 2213
StuI AGGCCT 1 cut(s) 445
StyD4I CCNGG 6 cut(s) 1108, 1135, 1317, 1434, 1864, 2431
StyI CCWWGG 2 cut(s) 753, 1490
TaaI ACNGT 7 cut(s) 271, 677, 1347, 1744, 1780, 1885, 2288
TaiI ACGT 4 cut(s) 657, 1939, 2282, 2615
TaqI TCGA 9 cut(s) 528, 537, 1460, 1615, 2318, 2428, 2541, 2589, 2619
TatI WGTACW 2 cut(s) 472, 2553
TfiI GAWTC 4 cut(s) 413, 487, 968, 1662
TscAI CASTG 5 cut(s) 682, 1290, 1352, 1785, 1888
TseFI GTSAC 3 cut(s) 499, 1518, 2398
TseI GCWGC 7 cut(s) 695, 1022, 1040, 1086, 1327, 2189, 2257
Tsp45I GTSAC 3 cut(s) 499, 1518, 2398
TspRI CASTG 5 cut(s) 682, 1290, 1352, 1785, 1888
Van91I CCANNNNNTGG 1 cut(s) 1142
Vha464I CTTAAG 2 cut(s) 983, 2632
VpaK11BI GGWCC 1 cut(s) 77
VspI ATTAAT 2 cut(s) 324, 509
XapI RAATTY 4 cut(s) 173, 1507, 1622, 1949
XceI RCATGY 4 cut(s) 151, 1040, 2331, 2456
XmiI GTMKAC 4 cut(s) 266, 464, 651, 880
XmnI GAANNNNTTC 2 cut(s) 1711, 2003
XspI CTAG 7 cut(s) 260, 884, 948, 1853, 2063, 2186, 2213
ZrmI AGTACT 1 cut(s) 2555
Zsp2I ATGCAT 1 cut(s) 2458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.