SNF2 domain-containing protein CLASSY
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G16390 AT2G16390 AT2G21450 AT2G21450 AT2G21450 AT2G21455 |
| fragaria_vesca | FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 |
| malus_domestica | MD05G1059900.v1.1 MD10G1068100.v1.1 |
| prunus_persica | Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 |
| pyrus_communis | pycom05g05130 pycom10g05390 |
| rosa_chinensis | RchiOBHm_Chr6g0266061 RchiOBHm_Chr6g0266081 |
| rosa_laevigata | RLG00000014118 RLG00000014121 |
| rosa_multiflora | Rmu_sc0000776.1_g000029 Rmu_sc0000776.1_g000037 |
| rosa_roxburghii | Rroxscaffold_174G00435180 Rroxscaffold_174G00435190 Rroxscaffold_7G00201990 Rroxscaffold_7G00202000 |
| rosa_rugosa | Rorug06G0023000 Rorug06G0023700 |
| rosa_samantha | Rh6AG144300 Rh6AG144400 Rh6BG144700 Rh6BG144900 Rh6CG141400 Rh6CG141600 Rh6DG129100 Rh6DG129200 |
| rosa_wichuraiana | Rw1G008890 Rw6G012470 Rw6G012480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1483 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1166, 2556 |
| AccI | GTMKAC | 1 cut(s) | 161 |
| AccII | CGCG | 2 cut(s) | 1675, 1967 |
| AciI | CCGC | 3 cut(s) | 810, 871, 1232 |
| AclWI | GGATC | 3 cut(s) | 182, 2042, 2304 |
| AcoI | YGGCCR | 1 cut(s) | 2437 |
| AcsI | RAATTY | 3 cut(s) | 1284, 1652, 2192 |
| AcuI | CTGAAG | 5 cut(s) | 150, 726, 813, 1976, 2526 |
| AfaI | GTAC | 7 cut(s) | 144, 943, 1406, 1584, 2024, 2177, 2480 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1166, 2034, 2280, 2509, 2556 |
| AhlI | ACTAGT | 1 cut(s) | 1765 |
| AjnI | CCWGG | 9 cut(s) | 561, 628, 655, 1132, 1159, 1464, 1888, 2233, 2452 |
| AleI | CACNNNNGTG | 1 cut(s) | 1538 |
| Alw21I | GWGCWC | 1 cut(s) | 2073 |
| Alw26I | GTCTC | 4 cut(s) | 629, 896, 1937, 2597 |
| AlwI | GGATC | 3 cut(s) | 182, 2042, 2304 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1166, 1354 |
| Ama87I | CYCGRG | 1 cut(s) | 2382 |
| AoxI | GGCC | 3 cut(s) | 152, 1149, 2437 |
| ApeKI | GCWGC | 4 cut(s) | 452, 989, 1351, 2492 |
| ApoI | RAATTY | 3 cut(s) | 1284, 1652, 2192 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 519, 551 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1730, 1961 |
| AspA2I | CCTAGG | 1 cut(s) | 1571 |
| AspLEI | GCGC | 1 cut(s) | 1692 |
| AspS9I | GGNCC | 4 cut(s) | 781, 1150, 1662, 2289 |
| AsuHPI | GGTGA | 6 cut(s) | 683, 1136, 1915, 2162, 2273, 2639 |
| AvaI | CYCGRG | 1 cut(s) | 2382 |
| AvaII | GGWCC | 3 cut(s) | 781, 1662, 2289 |
| AvrII | CCTAGG | 1 cut(s) | 1571 |
| BaeGI | GKGCMC | 1 cut(s) | 1515 |
| BanI | GGYRCC | 1 cut(s) | 1483 |
| BanII | GRGCYC | 2 cut(s) | 364, 2073 |
| BbsI | GAAGAC | 1 cut(s) | 2320 |
| Bbv12I | GWGCWC | 1 cut(s) | 2073 |
| BbvI | GCAGC | 4 cut(s) | 464, 1001, 1363, 2479 |
| BccI | CCATC | 8 cut(s) | 38, 556, 592, 710, 1016, 1688, 2090, 2412 |
| BceAI | ACGGC | 2 cut(s) | 823, 2424 |
| BciT130I | CCWGG | 9 cut(s) | 563, 630, 657, 1134, 1161, 1466, 1890, 2235, 2454 |
| BciVI | GTATCC | 3 cut(s) | 1227, 1255, 1400 |
| BclI | TGATCA | 1 cut(s) | 829 |
| BcoDI | GTCTC | 4 cut(s) | 629, 896, 1937, 2597 |
| BcuI | ACTAGT | 1 cut(s) | 1765 |
| BfaI | CTAG | 9 cut(s) | 387, 1208, 1227, 1443, 1572, 1766, 1842, 1877, 2496 |
| BfmI | CTRYAG | 1 cut(s) | 1781 |
| BfuI | GTATCC | 3 cut(s) | 1227, 1255, 1400 |
| BisI | GCNGC | 5 cut(s) | 453, 871, 990, 1352, 2493 |
| BlnI | CCTAGG | 1 cut(s) | 1571 |
| BlsI | GCNGC | 5 cut(s) | 454, 872, 991, 1353, 2494 |
| Bme1390I | CCNGG | 9 cut(s) | 563, 630, 657, 1134, 1161, 1466, 1890, 2235, 2454 |
| Bme18I | GGWCC | 3 cut(s) | 781, 1662, 2289 |
| BmeT110I | CYCGRG | 1 cut(s) | 2382 |
| BmgT120I | GGNCC | 4 cut(s) | 781, 1150, 1662, 2289 |
| BmiI | GGNNCC | 4 cut(s) | 363, 783, 1485, 1594 |
| BmrFI | CCNGG | 9 cut(s) | 563, 630, 657, 1134, 1161, 1466, 1890, 2235, 2454 |
| BmsI | GCATC | 3 cut(s) | 1152, 1701, 2387 |
| BpiI | GAAGAC | 1 cut(s) | 2320 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 271, 303, 413, 445, 2255, 2287 |
| BpmI | CTGGAG | 4 cut(s) | 233, 432, 1143, 1376 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2322 |
| Bsa29I | ATCGAT | 1 cut(s) | 1342 |
| BsaBI | GATNNNNATC | 2 cut(s) | 687, 2403 |
| BsaI | GGTCTC | 3 cut(s) | 629, 896, 2597 |
| BsaJI | CCNNGG | 7 cut(s) | 57, 333, 655, 1133, 1571, 2234, 2292 |
| BsaWI | WCCGGW | 1 cut(s) | 202 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 651, 681 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1166, 2034, 2280, 2509, 2556 |
| Bse118I | RCCGGY | 1 cut(s) | 2424 |
| Bse1I | ACTGG | 2 cut(s) | 2570, 2648 |
| Bse8I | GATNNNNATC | 2 cut(s) | 687, 2403 |
| BseBI | CCWGG | 9 cut(s) | 563, 630, 657, 1134, 1161, 1466, 1890, 2235, 2454 |
| BseCI | ATCGAT | 1 cut(s) | 1342 |
| BseDI | CCNNGG | 7 cut(s) | 57, 333, 655, 1133, 1571, 2234, 2292 |
| BseJI | GATNNNNATC | 2 cut(s) | 687, 2403 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1166, 2034, 2280, 2509, 2556 |
| BseMII | CTCAG | 4 cut(s) | 984, 1938, 2271, 2430 |
| BseNI | ACTGG | 2 cut(s) | 2570, 2648 |
| BseRI | GAGGAG | 3 cut(s) | 353, 1408, 1881 |
| BseSI | GKGCMC | 1 cut(s) | 1515 |
| BseXI | GCAGC | 4 cut(s) | 464, 1001, 1363, 2479 |
| BsgI | GTGCAG | 1 cut(s) | 1994 |
| Bsh1236I | CGCG | 2 cut(s) | 1675, 1967 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1435 |
| BshFI | GGCC | 3 cut(s) | 154, 1151, 2439 |
| BshNI | GGYRCC | 1 cut(s) | 1483 |
| BshVI | ATCGAT | 1 cut(s) | 1342 |
| BsiEI | CGRYCG | 1 cut(s) | 1435 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2073 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2382 |
| BsiSI | CCGG | 2 cut(s) | 203, 2425 |
| BslFI | GGGAC | 3 cut(s) | 382, 591, 620 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1166, 2034, 2280, 2509, 2556 |
| BsmAI | GTCTC | 4 cut(s) | 629, 896, 1937, 2597 |
| BsmFI | GGGAC | 3 cut(s) | 382, 591, 620 |
| BsmI | GAATGC | 1 cut(s) | 976 |
| BsnI | GGCC | 3 cut(s) | 154, 1151, 2439 |
| Bso31I | GGTCTC | 3 cut(s) | 629, 896, 2597 |
| BsoBI | CYCGRG | 1 cut(s) | 2382 |
| Bsp1286I | GDGCHC | 3 cut(s) | 364, 1515, 2073 |
| Bsp1407I | TGTACA | 2 cut(s) | 142, 2478 |
| Bsp19I | CCATGG | 1 cut(s) | 2292 |
| Bsp68I | TCGCGA | 2 cut(s) | 1675, 1967 |
| BspACI | CCGC | 3 cut(s) | 810, 871, 1232 |
| BspANI | GGCC | 3 cut(s) | 154, 1151, 2439 |
| BspCNI | CTCAG | 4 cut(s) | 985, 1939, 2270, 2429 |
| BspDI | ATCGAT | 1 cut(s) | 1342 |
| BspFNI | CGCG | 2 cut(s) | 1675, 1967 |
| BspHI | TCATGA | 1 cut(s) | 1695 |
| BspLI | GGNNCC | 4 cut(s) | 363, 783, 1485, 1594 |
| BspPI | GGATC | 3 cut(s) | 182, 2042, 2304 |
| BspT107I | GGYRCC | 1 cut(s) | 1483 |
| BspTNI | GGTCTC | 3 cut(s) | 629, 896, 2597 |
| BsrFI | RCCGGY | 1 cut(s) | 2424 |
| BsrGI | TGTACA | 2 cut(s) | 142, 2478 |
| BsrI | ACTGG | 2 cut(s) | 2570, 2648 |
| BssAI | RCCGGY | 1 cut(s) | 2424 |
| BssECI | CCNNGG | 7 cut(s) | 57, 333, 655, 1133, 1571, 2234, 2292 |
| BssT1I | CCWWGG | 4 cut(s) | 57, 333, 1571, 2292 |
| Bst2UI | CCWGG | 9 cut(s) | 563, 630, 657, 1134, 1161, 1466, 1890, 2235, 2454 |
| Bst4CI | ACNGT | 7 cut(s) | 185, 594, 821, 827, 1371, 1816, 1909 |
| Bst6I | CTCTTC | 2 cut(s) | 2502, 2639 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 269 |
| BstAUI | TGTACA | 2 cut(s) | 142, 2478 |
| BstC8I | GCNNGC | 2 cut(s) | 2426, 2430 |
| BstDEI | CTNAG | 7 cut(s) | 156, 993, 1399, 1947, 2257, 2322, 2416 |
| BstDSI | CCRYGG | 1 cut(s) | 2292 |
| BstFNI | CGCG | 2 cut(s) | 1675, 1967 |
| BstHHI | GCGC | 1 cut(s) | 1692 |
| BstMAI | GTCTC | 4 cut(s) | 629, 896, 1937, 2597 |
| BstMCI | CGRYCG | 1 cut(s) | 1435 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 269, 452, 1240 |
| BstNI | CCWGG | 9 cut(s) | 563, 630, 657, 1134, 1161, 1466, 1890, 2235, 2454 |
| BstNSI | RCATGY | 2 cut(s) | 958, 2352 |
| BstSCI | CCNGG | 9 cut(s) | 561, 628, 655, 1132, 1159, 1464, 1888, 2233, 2452 |
| BstSFI | CTRYAG | 1 cut(s) | 1781 |
| BstSLI | GKGCMC | 1 cut(s) | 1515 |
| BstUI | CGCG | 2 cut(s) | 1675, 1967 |
| BstV1I | GCAGC | 4 cut(s) | 464, 1001, 1363, 2479 |
| BstV2I | GAAGAC | 1 cut(s) | 2320 |
| Bsu15I | ATCGAT | 1 cut(s) | 1342 |
| BsuI | GTATCC | 3 cut(s) | 1227, 1255, 1400 |
| BsuRI | GGCC | 3 cut(s) | 154, 1151, 2439 |
| BsuTUI | ATCGAT | 1 cut(s) | 1342 |
| BtgI | CCRYGG | 1 cut(s) | 2292 |
| BtsIMutI | CAGTG | 7 cut(s) | 190, 1376, 1533, 1905, 2043, 2424, 2655 |
| BtuMI | TCGCGA | 2 cut(s) | 1675, 1967 |
| Cac8I | GCNNGC | 2 cut(s) | 2426, 2430 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1166, 1354 |
| CciI | TCATGA | 1 cut(s) | 1695 |
| CfoI | GCGC | 1 cut(s) | 1692 |
| Cfr10I | RCCGGY | 1 cut(s) | 2424 |
| Cfr13I | GGNCC | 4 cut(s) | 781, 1150, 1662, 2289 |
| ClaI | ATCGAT | 1 cut(s) | 1342 |
| CsiI | ACCWGGT | 1 cut(s) | 2452 |
| Csp6I | GTAC | 7 cut(s) | 143, 942, 1405, 1583, 2023, 2176, 2479 |
| CviQI | GTAC | 7 cut(s) | 143, 942, 1405, 1583, 2023, 2176, 2479 |
| DdeI | CTNAG | 7 cut(s) | 156, 993, 1399, 1947, 2257, 2322, 2416 |
| DraI | TTTAAA | 1 cut(s) | 1282 |
| EaeI | YGGCCR | 1 cut(s) | 2437 |
| Eam1104I | CTCTTC | 2 cut(s) | 2502, 2639 |
| EarI | CTCTTC | 2 cut(s) | 2502, 2639 |
| Ecl136II | GAGCTC | 1 cut(s) | 2071 |
| Eco130I | CCWWGG | 4 cut(s) | 57, 333, 1571, 2292 |
| Eco147I | AGGCCT | 1 cut(s) | 154 |
| Eco24I | GRGCYC | 2 cut(s) | 364, 2073 |
| Eco31I | GGTCTC | 3 cut(s) | 629, 896, 2597 |
| Eco32I | GATATC | 1 cut(s) | 1452 |
| Eco47I | GGWCC | 3 cut(s) | 781, 1662, 2289 |
| Eco53kI | GAGCTC | 1 cut(s) | 2071 |
| Eco57I | CTGAAG | 5 cut(s) | 150, 726, 813, 1976, 2526 |
| Eco88I | CYCGRG | 1 cut(s) | 2382 |
| EcoICRI | GAGCTC | 1 cut(s) | 2071 |
| EcoRII | CCWGG | 9 cut(s) | 561, 628, 655, 1132, 1159, 1464, 1888, 2233, 2452 |
| EcoRV | GATATC | 1 cut(s) | 1452 |
| EcoT14I | CCWWGG | 4 cut(s) | 57, 333, 1571, 2292 |
| EcoT38I | GRGCYC | 2 cut(s) | 364, 2073 |
| ErhI | CCWWGG | 4 cut(s) | 57, 333, 1571, 2292 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 499, 531, 1569, 1601, 2315, 2347 |
| FaqI | GGGAC | 3 cut(s) | 382, 591, 620 |
| FauI | CCCGC | 1 cut(s) | 803 |
| FauNDI | CATATG | 1 cut(s) | 1062 |
| FbaI | TGATCA | 1 cut(s) | 829 |
| FblI | GTMKAC | 1 cut(s) | 161 |
| Fnu4HI | GCNGC | 5 cut(s) | 453, 871, 990, 1352, 2493 |
| FriOI | GRGCYC | 2 cut(s) | 364, 2073 |
| Fsp4HI | GCNGC | 5 cut(s) | 453, 871, 990, 1352, 2493 |
| FspBI | CTAG | 9 cut(s) | 387, 1208, 1227, 1443, 1572, 1766, 1842, 1877, 2496 |
| GlaI | GCGC | 1 cut(s) | 1691 |
| GluI | GCNGC | 5 cut(s) | 453, 871, 990, 1352, 2493 |
| GsuI | CTGGAG | 4 cut(s) | 233, 432, 1143, 1376 |
| HaeIII | GGCC | 3 cut(s) | 154, 1151, 2439 |
| HapII | CCGG | 2 cut(s) | 203, 2425 |
| HhaI | GCGC | 1 cut(s) | 1692 |
| Hin6I | GCGC | 1 cut(s) | 1690 |
| HinP1I | GCGC | 1 cut(s) | 1690 |
| HincII | GTYRAC | 1 cut(s) | 1615 |
| HindII | GTYRAC | 1 cut(s) | 1615 |
| HpaII | CCGG | 2 cut(s) | 203, 2425 |
| HphI | GGTGA | 6 cut(s) | 683, 1136, 1915, 2162, 2273, 2639 |
| Hpy166II | GTNNAC | 5 cut(s) | 162, 500, 781, 1615, 2479 |
| Hpy8I | GTNNAC | 5 cut(s) | 162, 500, 781, 1615, 2479 |
| HpyAV | CCTTC | 7 cut(s) | 788, 795, 1497, 1780, 1797, 2038, 2215 |
| HpyCH4III | ACNGT | 7 cut(s) | 185, 594, 821, 827, 1371, 1816, 1909 |
| HpyCH4V | TGCA | 5 cut(s) | 374, 1143, 1198, 2011, 2444 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 269, 452, 1240 |
| HpyF3I | CTNAG | 7 cut(s) | 156, 993, 1399, 1947, 2257, 2322, 2416 |
| HspAI | GCGC | 1 cut(s) | 1690 |
| KroI | GCCGGC | 1 cut(s) | 2424 |
| KroNI | GCCGGC | 1 cut(s) | 2426 |
| Ksp22I | TGATCA | 1 cut(s) | 829 |
| LmnI | GCTCC | 5 cut(s) | 367, 451, 1162, 1378, 2276 |
| Lsp1109I | GCAGC | 4 cut(s) | 464, 1001, 1363, 2479 |
| LweI | GCATC | 3 cut(s) | 1152, 1701, 2387 |
| MabI | ACCWGGT | 1 cut(s) | 2452 |
| MaeI | CTAG | 9 cut(s) | 387, 1208, 1227, 1443, 1572, 1766, 1842, 1877, 2496 |
| MaeIII | GTNAC | 7 cut(s) | 6, 125, 244, 803, 821, 1112, 1810 |
| MfeI | CAATTG | 1 cut(s) | 2433 |
| MhlI | GDGCHC | 3 cut(s) | 364, 1515, 2073 |
| MlyI | GAGTC | 8 cut(s) | 14, 218, 422, 2109, 2150, 2239, 2273, 2394 |
| MmeI | TCCRAC | 1 cut(s) | 2207 |
| MroNI | GCCGGC | 1 cut(s) | 2424 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1730, 1961 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1538, 2612 |
| MspA1I | CMGCKG | 3 cut(s) | 992, 1354, 2147 |
| MspI | CCGG | 2 cut(s) | 203, 2425 |
| MspR9I | CCNGG | 9 cut(s) | 563, 630, 657, 1134, 1161, 1466, 1890, 2235, 2454 |
| MunI | CAATTG | 1 cut(s) | 2433 |
| Mva1269I | GAATGC | 1 cut(s) | 976 |
| MvaI | CCWGG | 9 cut(s) | 563, 630, 657, 1134, 1161, 1466, 1890, 2235, 2454 |
| MvnI | CGCG | 2 cut(s) | 1675, 1967 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 269, 452, 1240 |
| NaeI | GCCGGC | 1 cut(s) | 2426 |
| NcoI | CCATGG | 1 cut(s) | 2292 |
| NdeI | CATATG | 1 cut(s) | 1062 |
| NgoMIV | GCCGGC | 1 cut(s) | 2424 |
| NlaIV | GGNNCC | 4 cut(s) | 363, 783, 1485, 1594 |
| NmuCI | GTSAC | 4 cut(s) | 6, 803, 821, 1810 |
| NruI | TCGCGA | 2 cut(s) | 1675, 1967 |
| NspI | RCATGY | 2 cut(s) | 958, 2352 |
| OliI | CACNNNNGTG | 1 cut(s) | 1538 |
| PaeR7I | CTCGAG | 1 cut(s) | 2382 |
| PagI | TCATGA | 1 cut(s) | 1695 |
| PceI | AGGCCT | 1 cut(s) | 154 |
| PctI | GAATGC | 1 cut(s) | 976 |
| PdiI | GCCGGC | 1 cut(s) | 2426 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1730, 1961 |
| PfeI | GAWTC | 9 cut(s) | 479, 758, 962, 1254, 1325, 1498, 1636, 1748, 1871 |
| PflFI | GACNNNGTC | 1 cut(s) | 2454 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1166, 2556 |
| PfoI | TCCNGGA | 3 cut(s) | 561, 628, 1888 |
| PkrI | GCNGC | 5 cut(s) | 454, 872, 991, 1353, 2494 |
| Ple19I | CGATCG | 1 cut(s) | 1435 |
| PleI | GAGTC | 8 cut(s) | 13, 218, 422, 2108, 2149, 2238, 2272, 2393 |
| PpsI | GAGTC | 8 cut(s) | 13, 218, 422, 2108, 2149, 2238, 2272, 2393 |
| Psp124BI | GAGCTC | 1 cut(s) | 2073 |
| Psp6I | CCWGG | 9 cut(s) | 561, 628, 655, 1132, 1159, 1464, 1888, 2233, 2452 |
| PspGI | CCWGG | 9 cut(s) | 561, 628, 655, 1132, 1159, 1464, 1888, 2233, 2452 |
| PspN4I | GGNNCC | 4 cut(s) | 363, 783, 1485, 1594 |
| PspPI | GGNCC | 4 cut(s) | 781, 1150, 1662, 2289 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1397, 1429, 1764, 1796 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1166, 1354 |
| PsyI | GACNNNGTC | 1 cut(s) | 2454 |
| PvuI | CGATCG | 1 cut(s) | 1435 |
| PvuII | CAGCTG | 3 cut(s) | 992, 1354, 2147 |
| RruI | TCGCGA | 2 cut(s) | 1675, 1967 |
| RsaI | GTAC | 7 cut(s) | 144, 943, 1406, 1584, 2024, 2177, 2480 |
| RsaNI | GTAC | 7 cut(s) | 143, 942, 1405, 1583, 2023, 2176, 2479 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1538, 2612 |
| SacI | GAGCTC | 1 cut(s) | 2073 |
| SatI | GCNGC | 5 cut(s) | 453, 871, 990, 1352, 2493 |
| Sau96I | GGNCC | 4 cut(s) | 781, 1150, 1662, 2289 |
| SchI | GAGTC | 8 cut(s) | 14, 218, 422, 2109, 2150, 2239, 2273, 2394 |
| ScrFI | CCNGG | 9 cut(s) | 563, 630, 657, 1134, 1161, 1466, 1890, 2235, 2454 |
| SduI | GDGCHC | 3 cut(s) | 364, 1515, 2073 |
| SexAI | ACCWGGT | 1 cut(s) | 2452 |
| SfaNI | GCATC | 3 cut(s) | 1152, 1701, 2387 |
| SfcI | CTRYAG | 1 cut(s) | 1781 |
| Sfr274I | CTCGAG | 1 cut(s) | 2382 |
| SinI | GGWCC | 3 cut(s) | 781, 1662, 2289 |
| SlaI | CTCGAG | 1 cut(s) | 2382 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1538, 2612 |
| SmlI | CTYRAG | 1 cut(s) | 2382 |
| SmoI | CTYRAG | 1 cut(s) | 2382 |
| SpeI | ACTAGT | 1 cut(s) | 1765 |
| SseBI | AGGCCT | 1 cut(s) | 154 |
| SsiI | CCGC | 3 cut(s) | 810, 871, 1232 |
| SspMI | CTAG | 9 cut(s) | 387, 1208, 1227, 1443, 1572, 1766, 1842, 1877, 2496 |
| SstI | GAGCTC | 1 cut(s) | 2073 |
| StuI | AGGCCT | 1 cut(s) | 154 |
| StyD4I | CCNGG | 9 cut(s) | 561, 628, 655, 1132, 1159, 1464, 1888, 2233, 2452 |
| StyI | CCWWGG | 4 cut(s) | 57, 333, 1571, 2292 |
| TaaI | ACNGT | 7 cut(s) | 185, 594, 821, 827, 1371, 1816, 1909 |
| TaqI | TCGA | 4 cut(s) | 274, 1342, 1435, 2383 |
| TatI | WGTACW | 5 cut(s) | 142, 941, 1582, 2022, 2478 |
| TauI | GCSGC | 1 cut(s) | 873 |
| TfiI | GAWTC | 9 cut(s) | 479, 758, 962, 1254, 1325, 1498, 1636, 1748, 1871 |
| TscAI | CASTG | 7 cut(s) | 190, 1376, 1540, 1912, 2050, 2424, 2655 |
| TseFI | GTSAC | 4 cut(s) | 6, 803, 821, 1810 |
| TseI | GCWGC | 4 cut(s) | 452, 989, 1351, 2492 |
| Tsp45I | GTSAC | 4 cut(s) | 6, 803, 821, 1810 |
| TspRI | CASTG | 7 cut(s) | 190, 1376, 1540, 1912, 2050, 2424, 2655 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2454 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1166, 2556 |
| VpaK11BI | GGWCC | 3 cut(s) | 781, 1662, 2289 |
| XapI | RAATTY | 3 cut(s) | 1284, 1652, 2192 |
| XceI | RCATGY | 2 cut(s) | 958, 2352 |
| XhoI | CTCGAG | 1 cut(s) | 2382 |
| XmaJI | CCTAGG | 1 cut(s) | 1571 |
| XmiI | GTMKAC | 1 cut(s) | 161 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1730, 1961 |
| XspI | CTAG | 9 cut(s) | 387, 1208, 1227, 1443, 1572, 1766, 1842, 1877, 2496 |