Rh6CG141600

SNF2 domain-containing protein CLASSY

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Forward (+)
18336998 .. 18341194
4197 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG141600.1

Sequence Viewer

Length: 2892 bp
ATGTCCAACGGTGTGCCAAAAAAAAGAAATCATTCAAATTTTATGGCACCAGCACAACCTGTCATTGACCTTAGTTCCAATGGTGAAGACAATGGTAGGAGGAGGTCATCGAATGTGCATCAGAAGATAAAGCTGGAACCTCCTCCGGAACACCATCAACAGGTCATGGATATGGAGGTTCAGTATCCAAACAATCTTACAGCACTAGCACCCCCTGCCATCGTCCTTAGTTCTGATGACGAAGACAATGGAAGTAGGGAGCCACTTCATCTGTATCCGAAGATTGTATTGGAGCCTCCTCCTCCTACAGAACATGATCAACGTGTCATTGATATGGAAACTAAATCTTCAAACAATATTGCAGCAGTAGGACCATCTGTGGTTTTCCTTAGTTCCGATGATGAAGACGATGAGAGTAGGATGATATTTCATGAGAAGGTTGTCTTGGAGCCTGTTGATAGACTTCTAAAGAAGAGCTCTATGGATAGTGTAGAGATGAATGCTCAAAGAAAAGAGTTGGAAACTATACCTGGATTGAATATGGGGATGCATAAAGACATAAAGGACGGTGTAGAGAGCAGGGATCATATCTGGATAGATAAAGATGTAGATGTTGGTGCAGCAGAAGATGTGGCCGGTCTAGAACTCATTGATTGTCACGGGCATGATATTCTGGTTCAGGATTGTTTAGCAAGCAAAGATCACATAAAAGAGTTGAAAACATTGGCCGAAAAAGATGTAGATATTGATGGAGACAGAACTTCTGAAAAGGAGTTCAGTGATCAAAGTAATTCTGAAAGTATAGAAGATATACAAAGCATAGCTCCAAGCACAGAGGTCGGAACTCTAGTTCATGAAAATGATATGGTGGCTGGGGAAGGTAATGTGGAAGATGATATGAAGGATAGTGGTAAAATCAATGTTGAGGAAGATGATAGACATGACACAGAGGAAGATGATGAAAACAATATCAAGGAAGATGATCTGAGTGATATTGAGGAAGATGATGTAAATGATAATGAGGAAGATGATGCAAATGATATTGAGGGAGAGGATCTAACAGATGCATGGAACGAGATGACAATGGCATTAGAATGTGCCAAGGGAAAAAGGAGTACACGCACTTATGTGCAAGAGCCGCGGGATGCCAACAACACAGAGCCAACTGAGAGTTCCTCACTTGGAATCAAGCTTACTACTGGGCGTGATTTAATGGAAACAGAATTTTCTGCTCATCCAAGTCATAGAAAGCATATGAAACCACATCAAGTAGAGGGGTTTAATTTTCTTTGTAGCAATTTGTTGGGAGACAACCCAGGTGGTTGCATTCTTGCTCATGCCCCTGGTTCAGGAAAGACTTTTCTGGTTATAAGTTTTGTCCAGAGTTACTTAGCCAGGTTTCCCGATGCTAGACCACTTGTTGTTCTACCTAAAACCATTTTGGATACATGGAAGAAAGAGTTCCGGATATGGCAAGTTGAGGACATTCCTTTGCATGATTTCTATACTTCCAAGGCAGACAAGCGGTCTCAACAGTTGAATGTATTAAAACAATGGGTAGAGCAGAAGAGCATCCTTTTCTTAGGGTACCAACAGTTCTCTACTATAATGTGCGACATTGGCAGTAGCAAGACATCGGATAAATGCCGAGAAATTCTGCAGAAGTCCCCTAGTCTTCTCATATTAGATGAAGGTCACACACCAAGGAATGATGAAACTAATCAGTTTCAAGCTCTTGTAAGAGTACAGACCCCACTGAAAGTAGTTCTCTCAGGAACACTCTATCAAAACCATGTCAAAGAAGTCTTCACTCTCTTAGATCTTGTTCGTCCAAAGTTTCTGAAATTGGACACTTCCCGGGAGATTGTGAAGCGGATCATGAGCATAGTACGGATATCGGGTGTGAGGAAACAGTTAAAAGGTGGAGGAGATTCAGCTTTTTTTGACTTAGTAGAGCATACCCTCAAGAAAGATGAAGACTTTAAGAGGAAGGTAGCCATTGTACAAGATCTTCGAGAAATGACCAGGAAGGTGCTCCATTATTATAAAGGTGACTTTTTAGATGAACTTCCTGGGCTTGTTGAGTTCACACTACTACTCGGCCTCACTTCAAGACAGAAAGCTGAATTTGAAAAATTGAAGGGATTGGACAAGTTAAGGAGAATGCCTGTTGGGAGCCTTGTCTCTATGCATCCAGAGTTGAGATATCTTTCAGAAAAAAATCCATCAACTGAGAAGGGCTGCACAGTTGATAATAAGACCATGGATCGATTCTTGGAAAAGTTAAATTTCAGAGATGGAGTAAAAGCTAAATTCTTTCTTAATATGCTTGCGTTGTGTGAATCAAATGATGAGAAGCTACTGGTTTTCAGCCAATATCTCCTGCCCCTGAAACTTATGGAGAGATTAGCTGTGAAGGAAATGGGTTGGAGTCTCAACAAGGAGATTTTTGTGTTAACCGGTGATACAAACTCTAAGCAAAAAGAATGGTCTATGGAACTCTTTAACACCTCACCGGATGCTAAAGTGTTATTTGGTTCCATTAGAGCTTGTGGGGAAGGAATCTCGCTTGTGGGAGCTTCTCGTGTCCTTATTATGGAAGTCCAGCTCAACCCTTCAGTGACTCGGCAAGCAATTGGACGTGCATTTCGACCAGGTCAGAAGAAGAAAGTGCACGTCTATAGATTGGTTGCTGCTGACTCACCAGAGGAGGATGACCACGTGCTCTCTTATACCAAGGAGATGATATCAAAGATATGGTTCGAGTGGACTGAGAGCTGTGGACATCAAGACTACTCTGGTATGAAGACTGTAGATCTAAATGACTCTGGTGATATGTTCTTGGAAAGTCAGTTGTTGAAGGAAGATATAAAGGTTTTGCAGAAAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

963

Amino Acids

109.08

Weight (kDa)

5.07

Isoelectric Point (pI)

42.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 418 - 594 9.5e-10 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 422 - 712 6.4e-25 SNF2-related domain
Helicase_C PF00271 771 - 886 3.1e-12 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1370, 2046
Acc65I GGTACC 1 cut(s) 1587
AccB1I GGYRCC 2 cut(s) 46, 1587
AccII CGCG 1 cut(s) 1141
AccIII TCCGGA 2 cut(s) 145, 1464
AciI CCGC 4 cut(s) 1139, 1141, 1525, 1873
AclWI GGATC 4 cut(s) 591, 1062, 1883, 2274
AcoI YGGCCR 2 cut(s) 633, 726
AcsI RAATTY 6 cut(s) 37, 1223, 1653, 2126, 2287, 2312
AcuI CTGAAG 1 cut(s) 2601
AcvI CACGTG 1 cut(s) 2722
AfaI GTAC 5 cut(s) 1117, 1589, 1746, 1890, 2004
AfiI CCNNNNNNNGG 3 cut(s) 160, 1349, 2596
AflIII ACRYGT 1 cut(s) 322
AgeI ACCGGT 1 cut(s) 2459
AhdI GACNNNNNGTC 1 cut(s) 1525
AjiI CACGTC 2 cut(s) 2642, 2677
AjnI CCWGG 7 cut(s) 529, 1315, 1342, 1394, 2024, 2071, 2653
AjuI GAANNNNNNNTTGG 6 cut(s) 272, 304, 428, 460, 1156, 1188
AleI CACNNNNGTG 1 cut(s) 1127
AloI GAACNNNNNNTCC 2 cut(s) 834, 866
Alw21I GWGCWC 4 cut(s) 479, 2037, 2676, 2727
Alw26I GTCTC 5 cut(s) 747, 1302, 1533, 2188, 2438
Alw44I GTGCAC 1 cut(s) 2672
AlwI GGATC 4 cut(s) 591, 1062, 1883, 2274
Ama87I CYCGRG 1 cut(s) 1857
Aor13HI TCCGGA 2 cut(s) 145, 1464
AoxI GGCC 3 cut(s) 633, 726, 2101
ApaLI GTGCAC 1 cut(s) 2672
ApeKI GCWGC 4 cut(s) 362, 620, 2241, 2693
ApoI RAATTY 6 cut(s) 37, 1223, 1653, 2126, 2287, 2312
ArsI GACNNNNNNTTYG 2 cut(s) 2631, 2663
AsiGI ACCGGT 1 cut(s) 2459
Asp700I GAANNNNTTC 2 cut(s) 31, 1460
Asp718I GGTACC 1 cut(s) 1587
AspS9I GGNCC 1 cut(s) 371
AsuC2I CCSGG 2 cut(s) 1858, 1859
AsuHPI GGTGA 6 cut(s) 95, 2063, 2474, 2505, 2694, 2843
AvaI CYCGRG 1 cut(s) 1857
AvaII GGWCC 1 cut(s) 371
BaeGI GKGCMC 1 cut(s) 2676
BanI GGYRCC 2 cut(s) 46, 1587
BanII GRGCYC 1 cut(s) 479
BarI GAAGNNNNNNTAC 2 cut(s) 1995, 2027
BauI CACGAG 1 cut(s) 2583
BbrPI CACGTG 1 cut(s) 2722
BbsI GAAGAC 7 cut(s) 93, 249, 411, 1667, 1798, 1983, 2813
Bbv12I GWGCWC 4 cut(s) 479, 2037, 2676, 2727
BbvI GCAGC 4 cut(s) 374, 632, 2228, 2680
BccI CCATC 6 cut(s) 162, 227, 382, 743, 2233, 2291
BcgI CGANNNNNNTGC 2 cut(s) 820, 854
BciT130I CCWGG 7 cut(s) 531, 1317, 1344, 1396, 2026, 2073, 2655
BciVI GTATCC 3 cut(s) 195, 285, 1438
BclI TGATCA 2 cut(s) 316, 781
BcnI CCSGG 2 cut(s) 1858, 1859
BcoDI GTCTC 5 cut(s) 747, 1302, 1533, 2188, 2438
BfaI CTAG 5 cut(s) 206, 641, 848, 1410, 1671
BfmI CTRYAG 4 cut(s) 306, 1658, 2680, 2811
BfuI GTATCC 3 cut(s) 195, 285, 1438
BglII AGATCT 3 cut(s) 1819, 2008, 2815
BisI GCNGC 5 cut(s) 363, 621, 1139, 2242, 2694
BlsI GCNGC 5 cut(s) 364, 622, 1140, 2243, 2695
Bme1390I CCNGG 9 cut(s) 531, 1317, 1344, 1396, 1858, 1859, 2026, 2073, 2655
Bme18I GGWCC 1 cut(s) 371
BmeRI GACNNNNNGTC 1 cut(s) 1525
BmeT110I CYCGRG 1 cut(s) 1857
BmgBI CACGTC 2 cut(s) 2642, 2677
BmgT120I GGNCC 1 cut(s) 371
BmiI GGNNCC 8 cut(s) 48, 138, 261, 294, 450, 1589, 2177, 2539
BmrFI CCNGG 9 cut(s) 531, 1317, 1344, 1396, 1858, 1859, 2026, 2073, 2655
BmrI ACTGGG 1 cut(s) 1209
BmsI GCATC 9 cut(s) 127, 537, 1021, 1054, 1135, 1396, 1581, 2200, 2509
BmuI ACTGGG 1 cut(s) 1209
BpiI GAAGAC 7 cut(s) 93, 249, 411, 1667, 1798, 1983, 2813
BplI GAGNNNNNCTC 2 cut(s) 1160, 1192
BpuEI CTTGAG 1 cut(s) 1949
BpuMI CCSGG 2 cut(s) 1858, 1859
Bsa29I ATCGAT 1 cut(s) 2269
BsaAI YACGTR 1 cut(s) 2722
BsaI GGTCTC 1 cut(s) 1533
BsaWI WCCGGW 4 cut(s) 145, 1464, 2459, 2515
BsaXI ACNNNNNCTCC 2 cut(s) 167, 197
Bsc4I CCNNNNNNNGG 3 cut(s) 160, 1349, 2596
Bse118I RCCGGY 2 cut(s) 635, 2459
Bse1I ACTGG 2 cut(s) 1204, 2367
BseAI TCCGGA 2 cut(s) 145, 1464
BseBI CCWGG 7 cut(s) 531, 1317, 1344, 1396, 2026, 2073, 2655
BseCI ATCGAT 1 cut(s) 2269
BseGI GGATG 8 cut(s) 426, 552, 1150, 1234, 1572, 2191, 2524, 2719
BseLI CCNNNNNNNGG 3 cut(s) 160, 1349, 2596
BseMII CTCAG 5 cut(s) 977, 1158, 1785, 2223, 2763
BseNI ACTGG 2 cut(s) 1204, 2367
BseRI GAGGAG 6 cut(s) 115, 132, 288, 291, 1941, 2723
BseSI GKGCMC 1 cut(s) 2676
BseXI GCAGC 4 cut(s) 374, 632, 2228, 2680
BseYI CCCAGC 1 cut(s) 872
BsgI GTGCAG 2 cut(s) 639, 2227
Bsh1236I CGCG 1 cut(s) 1141
BshFI GGCC 3 cut(s) 635, 728, 2103
BshNI GGYRCC 2 cut(s) 46, 1587
BshTI ACCGGT 1 cut(s) 2459
BshVI ATCGAT 1 cut(s) 2269
BsiHKAI GWGCWC 4 cut(s) 479, 2037, 2676, 2727
BsiHKCI CYCGRG 1 cut(s) 1857
BsiSI CCGG 6 cut(s) 146, 636, 1465, 1858, 2460, 2516
BslFI GGGAC 1 cut(s) 1651
BslI CCNNNNNNNGG 3 cut(s) 160, 1349, 2596
BsmAI GTCTC 5 cut(s) 747, 1302, 1533, 2188, 2438
BsmFI GGGAC 1 cut(s) 1651
BsmI GAATGC 3 cut(s) 505, 1326, 2169
BsnI GGCC 3 cut(s) 635, 728, 2103
Bso31I GGTCTC 1 cut(s) 1533
BsoBI CYCGRG 1 cut(s) 1857
Bsp1286I GDGCHC 4 cut(s) 479, 2037, 2676, 2727
Bsp13I TCCGGA 2 cut(s) 145, 1464
Bsp1407I TGTACA 1 cut(s) 2002
Bsp19I CCATGG 1 cut(s) 2262
BspACI CCGC 4 cut(s) 1139, 1141, 1525, 1873
BspANI GGCC 3 cut(s) 635, 728, 2103
BspCNI CTCAG 5 cut(s) 978, 1159, 1784, 2224, 2764
BspDI ATCGAT 1 cut(s) 2269
BspEI TCCGGA 2 cut(s) 145, 1464
BspFNI CGCG 1 cut(s) 1141
BspHI TCATGA 3 cut(s) 430, 853, 1878
BspLI GGNNCC 8 cut(s) 48, 138, 261, 294, 450, 1589, 2177, 2539
BspMAI CTGCAG 1 cut(s) 1662
BspPI GGATC 4 cut(s) 591, 1062, 1883, 2274
BspQI GCTCTTC 2 cut(s) 467, 1562
BspT107I GGYRCC 2 cut(s) 46, 1587
BspTNI GGTCTC 1 cut(s) 1533
BsrFI RCCGGY 2 cut(s) 635, 2459
BsrGI TGTACA 1 cut(s) 2002
BsrI ACTGG 2 cut(s) 1204, 2367
BssAI RCCGGY 2 cut(s) 635, 2459
BssSI CACGAG 1 cut(s) 2583
BssT1I CCWWGG 5 cut(s) 1101, 1512, 1703, 2262, 2736
Bst2BI CACGAG 1 cut(s) 2583
Bst2UI CCWGG 7 cut(s) 531, 1317, 1344, 1396, 2026, 2073, 2655
Bst4CI ACNGT 7 cut(s) 11, 569, 1536, 1596, 1914, 2248, 2812
Bst6I CTCTTC 2 cut(s) 467, 1562
BstAPI GCANNNNNTGC 1 cut(s) 215
BstAUI TGTACA 1 cut(s) 2002
BstBAI YACGTR 1 cut(s) 2722
BstC8I GCNNGC 3 cut(s) 694, 2331, 2631
BstDSI CCRYGG 2 cut(s) 1139, 2262
BstENI CCTNNNNNAGG 1 cut(s) 1347
BstF5I GGATG 8 cut(s) 426, 552, 1150, 1234, 1572, 2191, 2524, 2719
BstFNI CGCG 1 cut(s) 1141
BstMAI GTCTC 5 cut(s) 747, 1302, 1533, 2188, 2438
BstMWI GCNNNNNNNGC 3 cut(s) 215, 1138, 1620
BstNI CCWGG 7 cut(s) 531, 1317, 1344, 1396, 2026, 2073, 2655
BstSCI CCNGG 9 cut(s) 529, 1315, 1342, 1394, 1856, 1857, 2024, 2071, 2653
BstSFI CTRYAG 4 cut(s) 306, 1658, 2680, 2811
BstSLI GKGCMC 1 cut(s) 2676
BstUI CGCG 1 cut(s) 1141
BstV1I GCAGC 4 cut(s) 374, 632, 2228, 2680
BstV2I GAAGAC 7 cut(s) 93, 249, 411, 1667, 1798, 1983, 2813
BstX2I RGATCY 4 cut(s) 1054, 1819, 2008, 2815
BstYI RGATCY 4 cut(s) 1054, 1819, 2008, 2815
Bsu15I ATCGAT 1 cut(s) 2269
BsuI GTATCC 3 cut(s) 195, 285, 1438
BsuRI GGCC 3 cut(s) 635, 728, 2103
BsuTUI ATCGAT 1 cut(s) 2269
BtgI CCRYGG 2 cut(s) 1139, 2262
BtrI CACGTC 2 cut(s) 2642, 2677
BtsCI GGATG 8 cut(s) 426, 552, 1150, 1234, 1572, 2191, 2524, 2719
BtsIMutI CAGTG 3 cut(s) 784, 1754, 2625
Cac8I GCNNGC 3 cut(s) 694, 2331, 2631
CciI TCATGA 3 cut(s) 430, 853, 1878
Cfr10I RCCGGY 2 cut(s) 635, 2459
Cfr13I GGNCC 1 cut(s) 371
Cfr42I CCGCGG 1 cut(s) 1142
Cfr9I CCCGGG 1 cut(s) 1857
ClaI ATCGAT 1 cut(s) 2269
CsiI ACCWGGT 1 cut(s) 2653
Csp6I GTAC 5 cut(s) 1116, 1588, 1745, 1889, 2003
CspAI ACCGGT 1 cut(s) 2459
CspCI CAANNNNNGTGG 2 cut(s) 1300, 1335
CviQI GTAC 5 cut(s) 1116, 1588, 1745, 1889, 2003
DriI GACNNNNNGTC 1 cut(s) 1525
EaeI YGGCCR 2 cut(s) 633, 726
Eam1104I CTCTTC 2 cut(s) 467, 1562
Eam1105I GACNNNNNGTC 1 cut(s) 1525
EarI CTCTTC 2 cut(s) 467, 1562
Ecl136II GAGCTC 1 cut(s) 477
Eco130I CCWWGG 5 cut(s) 1101, 1512, 1703, 2262, 2736
Eco24I GRGCYC 1 cut(s) 479
Eco31I GGTCTC 1 cut(s) 1533
Eco32I GATATC 3 cut(s) 1896, 2207, 2748
Eco47I GGWCC 1 cut(s) 371
Eco53kI GAGCTC 1 cut(s) 477
Eco57I CTGAAG 1 cut(s) 2601
Eco72I CACGTG 1 cut(s) 2722
Eco88I CYCGRG 1 cut(s) 1857
EcoICRI GAGCTC 1 cut(s) 477
EcoNI CCTNNNNNAGG 1 cut(s) 1347
EcoRII CCWGG 7 cut(s) 529, 1315, 1342, 1394, 2024, 2071, 2653
EcoRV GATATC 3 cut(s) 1896, 2207, 2748
EcoT14I CCWWGG 5 cut(s) 1101, 1512, 1703, 2262, 2736
EcoT22I ATGCAT 3 cut(s) 552, 1069, 2193
EcoT38I GRGCYC 1 cut(s) 479
ErhI CCWWGG 5 cut(s) 1101, 1512, 1703, 2262, 2736
FalI AAGNNNNNCTT 2 cut(s) 428, 460
FaqI GGGAC 1 cut(s) 1651
FauI CCCGC 1 cut(s) 1134
FauNDI CATATG 1 cut(s) 1254
FbaI TGATCA 2 cut(s) 316, 781
Fnu4HI GCNGC 5 cut(s) 363, 621, 1139, 2242, 2694
FokI GGATG 8 cut(s) 433, 559, 1157, 1221, 1559, 2178, 2531, 2726
FriOI GRGCYC 1 cut(s) 479
Fsp4HI GCNGC 5 cut(s) 363, 621, 1139, 2242, 2694
FspBI CTAG 5 cut(s) 206, 641, 848, 1410, 1671
GluI GCNGC 5 cut(s) 363, 621, 1139, 2242, 2694
GsaI CCCAGC 1 cut(s) 876
HaeIII GGCC 3 cut(s) 635, 728, 2103
HapII CCGG 6 cut(s) 146, 636, 1465, 1858, 2460, 2516
HincII GTYRAC 1 cut(s) 2457
HindII GTYRAC 1 cut(s) 2457
HindIII AAGCTT 1 cut(s) 1190
HinfI GANTC 9 cut(s) 1185, 1931, 2271, 2342, 2431, 2562, 2623, 2699, 2825
HpaI GTTAAC 1 cut(s) 2457
HpaII CCGG 6 cut(s) 146, 636, 1465, 1858, 2460, 2516
HphI GGTGA 6 cut(s) 95, 2063, 2474, 2505, 2694, 2843
Hpy166II GTNNAC 6 cut(s) 1118, 2088, 2457, 2674, 2769, 2783
Hpy8I GTNNAC 6 cut(s) 1118, 2088, 2457, 2674, 2769, 2783
HpyCH4III ACNGT 7 cut(s) 11, 569, 1536, 1596, 1914, 2248, 2812
HpyCH4IV ACGT 4 cut(s) 322, 2641, 2676, 2721
HpyF10VI GCNNNNNNNGC 3 cut(s) 215, 1138, 1620
HpySE526I ACGT 4 cut(s) 322, 2641, 2676, 2721
Kpn2I TCCGGA 2 cut(s) 145, 1464
KpnI GGTACC 1 cut(s) 1591
Ksp22I TGATCA 2 cut(s) 316, 781
KspAI GTTAAC 1 cut(s) 2457
KspI CCGCGG 1 cut(s) 1142
LguI GCTCTTC 2 cut(s) 467, 1562
LmnI GCTCC 7 cut(s) 259, 292, 448, 829, 2040, 2175, 2576
Lsp1109I GCAGC 4 cut(s) 374, 632, 2228, 2680
LweI GCATC 9 cut(s) 127, 537, 1021, 1054, 1135, 1396, 1581, 2200, 2509
MabI ACCWGGT 1 cut(s) 2653
MaeI CTAG 5 cut(s) 206, 641, 848, 1410, 1671
MaeII ACGT 4 cut(s) 322, 2641, 2676, 2721
MaeIII GTNAC 5 cut(s) 656, 1385, 1694, 2051, 2620
MfeI CAATTG 1 cut(s) 2634
MflI RGATCY 4 cut(s) 1054, 1819, 2008, 2815
MhlI GDGCHC 4 cut(s) 479, 2037, 2676, 2727
MlyI GAGTC 4 cut(s) 2440, 2617, 2693, 2819
MmeI TCCRAC 4 cut(s) 30, 498, 820, 2408
Mph1103I ATGCAT 3 cut(s) 552, 1069, 2193
MroI TCCGGA 2 cut(s) 145, 1464
MroXI GAANNNNTTC 2 cut(s) 31, 1460
MslI CAYNNNNRTG 6 cut(s) 170, 332, 663, 858, 1093, 1127
MspA1I CMGCKG 1 cut(s) 1141
MspI CCGG 6 cut(s) 146, 636, 1465, 1858, 2460, 2516
MspR9I CCNGG 9 cut(s) 531, 1317, 1344, 1396, 1858, 1859, 2026, 2073, 2655
MunI CAATTG 1 cut(s) 2634
Mva1269I GAATGC 3 cut(s) 505, 1326, 2169
MvaI CCWGG 7 cut(s) 531, 1317, 1344, 1396, 2026, 2073, 2655
MvnI CGCG 1 cut(s) 1141
MwoI GCNNNNNNNGC 3 cut(s) 215, 1138, 1620
NciI CCSGG 2 cut(s) 1858, 1859
NcoI CCATGG 1 cut(s) 2262
NdeI CATATG 1 cut(s) 1254
NlaIV GGNNCC 8 cut(s) 48, 138, 261, 294, 450, 1589, 2177, 2539
NmeAIII GCCGAG 3 cut(s) 1673, 2079, 2605
NmuCI GTSAC 4 cut(s) 656, 1694, 2051, 2620
NsiI ATGCAT 3 cut(s) 552, 1069, 2193
OliI CACNNNNGTG 1 cut(s) 1127
PagI TCATGA 3 cut(s) 430, 853, 1878
PciSI GCTCTTC 2 cut(s) 467, 1562
PcsI WCGNNNNNNNCGW 1 cut(s) 2647
PctI GAATGC 3 cut(s) 505, 1326, 2169
PdmI GAANNNNTTC 2 cut(s) 31, 1460
PfeI GAWTC 5 cut(s) 1185, 1931, 2271, 2342, 2562
PflFI GACNNNGTC 1 cut(s) 2655
PinAI ACCGGT 1 cut(s) 2459
PkrI GCNGC 5 cut(s) 364, 622, 1140, 2243, 2695
PleI GAGTC 4 cut(s) 2439, 2617, 2693, 2819
PmaCI CACGTG 1 cut(s) 2722
PmlI CACGTG 1 cut(s) 2722
PpsI GAGTC 4 cut(s) 2439, 2617, 2693, 2819
Ppu21I YACGTR 1 cut(s) 2722
PsiI TTATAA 2 cut(s) 1370, 2046
Psp124BI GAGCTC 1 cut(s) 479
Psp6I CCWGG 7 cut(s) 529, 1315, 1342, 1394, 2024, 2071, 2653
PspCI CACGTG 1 cut(s) 2722
PspFI CCCAGC 1 cut(s) 872
PspGI CCWGG 7 cut(s) 529, 1315, 1342, 1394, 2024, 2071, 2653
PspN4I GGNNCC 8 cut(s) 48, 138, 261, 294, 450, 1589, 2177, 2539
PspPI GGNCC 1 cut(s) 371
PsrI GAACNNNNNNTAC 2 cut(s) 1580, 1612
PstI CTGCAG 1 cut(s) 1662
PsuI RGATCY 4 cut(s) 1054, 1819, 2008, 2815
PsyI GACNNNGTC 1 cut(s) 2655
RsaI GTAC 5 cut(s) 1117, 1589, 1746, 1890, 2004
RsaNI GTAC 5 cut(s) 1116, 1588, 1745, 1889, 2003
RseI CAYNNNNRTG 6 cut(s) 170, 332, 663, 858, 1093, 1127
SacI GAGCTC 1 cut(s) 479
SacII CCGCGG 1 cut(s) 1142
SapI GCTCTTC 2 cut(s) 467, 1562
SatI GCNGC 5 cut(s) 363, 621, 1139, 2242, 2694
Sau96I GGNCC 1 cut(s) 371
SchI GAGTC 4 cut(s) 2440, 2617, 2693, 2819
ScrFI CCNGG 9 cut(s) 531, 1317, 1344, 1396, 1858, 1859, 2026, 2073, 2655
SduI GDGCHC 4 cut(s) 479, 2037, 2676, 2727
SexAI ACCWGGT 1 cut(s) 2653
SfaNI GCATC 9 cut(s) 127, 537, 1021, 1054, 1135, 1396, 1581, 2200, 2509
SfcI CTRYAG 4 cut(s) 306, 1658, 2680, 2811
Sfr303I CCGCGG 1 cut(s) 1142
SgrBI CCGCGG 1 cut(s) 1142
SinI GGWCC 1 cut(s) 371
SmaI CCCGGG 1 cut(s) 1859
SmiMI CAYNNNNRTG 6 cut(s) 170, 332, 663, 858, 1093, 1127
SmlI CTYRAG 1 cut(s) 1964
SmoI CTYRAG 1 cut(s) 1964
SsiI CCGC 4 cut(s) 1139, 1141, 1525, 1873
SspI AATATT 1 cut(s) 358
SspMI CTAG 5 cut(s) 206, 641, 848, 1410, 1671
SstI GAGCTC 1 cut(s) 479
StyD4I CCNGG 9 cut(s) 529, 1315, 1342, 1394, 1856, 1857, 2024, 2071, 2653
StyI CCWWGG 5 cut(s) 1101, 1512, 1703, 2262, 2736
TaaI ACNGT 7 cut(s) 11, 569, 1536, 1596, 1914, 2248, 2812
TaiI ACGT 4 cut(s) 325, 2644, 2679, 2724
TaqI TCGA 5 cut(s) 110, 2014, 2269, 2650, 2763
TatI WGTACW 3 cut(s) 1115, 1744, 2002
TauI GCSGC 1 cut(s) 1141
TfiI GAWTC 5 cut(s) 1185, 1931, 2271, 2342, 2562
TscAI CASTG 3 cut(s) 784, 1761, 2625
TseFI GTSAC 4 cut(s) 656, 1694, 2051, 2620
TseI GCWGC 4 cut(s) 362, 620, 2241, 2693
Tsp45I GTSAC 4 cut(s) 656, 1694, 2051, 2620
TspGWI ACGGA 1 cut(s) 1906
TspMI CCCGGG 1 cut(s) 1857
TspRI CASTG 3 cut(s) 784, 1761, 2625
Tth111I GACNNNGTC 1 cut(s) 2655
VneI GTGCAC 1 cut(s) 2672
VpaK11BI GGWCC 1 cut(s) 371
XagI CCTNNNNNAGG 1 cut(s) 1347
XapI RAATTY 6 cut(s) 37, 1223, 1653, 2126, 2287, 2312
XbaI TCTAGA 1 cut(s) 640
XmaI CCCGGG 1 cut(s) 1857
XmnI GAANNNNTTC 2 cut(s) 31, 1460
XspI CTAG 5 cut(s) 206, 641, 848, 1410, 1671
Zsp2I ATGCAT 3 cut(s) 552, 1069, 2193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.