SNF2 domain-containing protein CLASSY
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G16390 AT2G16390 AT2G21450 AT2G21450 AT2G21450 AT2G21455 |
| fragaria_vesca | FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 |
| malus_domestica | MD05G1059900.v1.1 MD10G1068100.v1.1 |
| prunus_persica | Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 |
| pyrus_communis | pycom05g05130 pycom10g05390 |
| rosa_chinensis | RchiOBHm_Chr6g0266061 RchiOBHm_Chr6g0266081 |
| rosa_laevigata | RLG00000014118 RLG00000014121 |
| rosa_multiflora | Rmu_sc0000776.1_g000029 Rmu_sc0000776.1_g000037 |
| rosa_roxburghii | Rroxscaffold_174G00435180 Rroxscaffold_174G00435190 Rroxscaffold_7G00201990 Rroxscaffold_7G00202000 |
| rosa_rugosa | Rorug06G0023000 Rorug06G0023700 |
| rosa_samantha | Rh6AG144300 Rh6AG144400 Rh6BG144700 Rh6BG144900 Rh6CG141400 Rh6CG141600 Rh6DG129100 Rh6DG129200 |
| rosa_wichuraiana | Rw1G008890 Rw6G012470 Rw6G012480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1061 |
| AccB1I | GGYRCC | 1 cut(s) | 1510 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1193, 2592 |
| AciI | CCGC | 2 cut(s) | 227, 898 |
| AclWI | GGATC | 4 cut(s) | 218, 678, 695, 812 |
| AcoI | YGGCCR | 2 cut(s) | 2473, 2491 |
| AcsI | RAATTY | 4 cut(s) | 347, 1982, 2147, 2228 |
| AcuI | CTGAAG | 4 cut(s) | 567, 762, 849, 2562 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1193, 2545, 2592, 2690 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1369 |
| AhlI | ACTAGT | 1 cut(s) | 1792 |
| AluBI | AGCT | 7 cut(s) | 434, 1381, 1766, 1912, 2144, 2281, 2528 |
| AluI | AGCT | 7 cut(s) | 434, 1381, 1766, 1912, 2144, 2281, 2528 |
| Alw21I | GWGCWC | 2 cut(s) | 59, 436 |
| Alw26I | GTCTC | 4 cut(s) | 444, 756, 2065, 2108 |
| AlwI | GGATC | 4 cut(s) | 218, 678, 695, 812 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1193 |
| AoxI | GGCC | 5 cut(s) | 557, 1176, 1353, 2473, 2491 |
| ApeKI | GCWGC | 4 cut(s) | 308, 500, 1378, 2528 |
| ApoI | RAATTY | 4 cut(s) | 347, 1982, 2147, 2228 |
| AseI | ATTAAT | 1 cut(s) | 2579 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1757, 1982 |
| AspLEI | GCGC | 1 cut(s) | 1719 |
| AspS9I | GGNCC | 4 cut(s) | 655, 1177, 1876, 2325 |
| AsuHPI | GGTGA | 5 cut(s) | 1070, 1163, 1414, 2198, 2675 |
| AvaII | GGWCC | 3 cut(s) | 655, 1876, 2325 |
| BaeGI | GKGCMC | 1 cut(s) | 1542 |
| BalI | TGGCCA | 1 cut(s) | 2493 |
| BanI | GGYRCC | 1 cut(s) | 1510 |
| BanII | GRGCYC | 1 cut(s) | 436 |
| BarI | GAAGNNNNNNTAC | 3 cut(s) | 913, 945, 2696 |
| BauI | CACGAG | 1 cut(s) | 2418 |
| BbsI | GAAGAC | 2 cut(s) | 732, 2356 |
| Bbv12I | GWGCWC | 2 cut(s) | 59, 436 |
| BbvI | GCAGC | 4 cut(s) | 295, 512, 1390, 2515 |
| BccI | CCATC | 8 cut(s) | 604, 640, 746, 766, 1019, 1043, 1715, 2448 |
| BceAI | ACGGC | 3 cut(s) | 525, 2460, 2477 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1529, 1563 |
| BciVI | GTATCC | 5 cut(s) | 1254, 1282, 1427, 1795, 2632 |
| BclI | TGATCA | 2 cut(s) | 2289, 2665 |
| BcoDI | GTCTC | 4 cut(s) | 444, 756, 2065, 2108 |
| BcuI | ACTAGT | 1 cut(s) | 1792 |
| BfaI | CTAG | 3 cut(s) | 1235, 1254, 1793 |
| BfmI | CTRYAG | 3 cut(s) | 204, 813, 1808 |
| BfuI | GTATCC | 5 cut(s) | 1254, 1282, 1427, 1795, 2632 |
| BisI | GCNGC | 5 cut(s) | 309, 501, 898, 1379, 2529 |
| BlsI | GCNGC | 5 cut(s) | 310, 502, 899, 1380, 2530 |
| BmcAI | AGTACT | 2 cut(s) | 739, 2560 |
| Bme18I | GGWCC | 3 cut(s) | 655, 1876, 2325 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1369 |
| BmgT120I | GGNCC | 4 cut(s) | 655, 1177, 1876, 2325 |
| BmiI | GGNNCC | 3 cut(s) | 405, 657, 1512 |
| BmsI | GCATC | 5 cut(s) | 130, 512, 909, 1179, 2344 |
| BpiI | GAAGAC | 2 cut(s) | 732, 2356 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 461, 493 |
| BpmI | CTGGAG | 5 cut(s) | 269, 480, 488, 681, 1170 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2165, 2358 |
| BpuEI | CTTGAG | 1 cut(s) | 1403 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2439 |
| BsaJI | CCNNGG | 8 cut(s) | 41, 93, 658, 1547, 1598, 1902, 2270, 2328 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 7, 37 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1193, 2545, 2592, 2690 |
| Bse1I | ACTGG | 3 cut(s) | 405, 1961, 2075 |
| Bse3DI | GCAATG | 1 cut(s) | 150 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2439 |
| BseDI | CCNNGG | 8 cut(s) | 41, 93, 658, 1547, 1598, 1902, 2270, 2328 |
| BseGI | GGATG | 7 cut(s) | 478, 777, 883, 1030, 1537, 1912, 2440 |
| BseJI | GATNNNNATC | 1 cut(s) | 2439 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1193, 2545, 2592, 2690 |
| BseMI | GCAATG | 1 cut(s) | 150 |
| BseMII | CTCAG | 3 cut(s) | 326, 1011, 2301 |
| BseNI | ACTGG | 3 cut(s) | 405, 1961, 2075 |
| BseRI | GAGGAG | 1 cut(s) | 1435 |
| BseSI | GKGCMC | 1 cut(s) | 1542 |
| BseXI | GCAGC | 4 cut(s) | 295, 512, 1390, 2515 |
| BsgI | GTGCAG | 1 cut(s) | 2024 |
| BshFI | GGCC | 5 cut(s) | 559, 1178, 1355, 2475, 2493 |
| BshNI | GGYRCC | 1 cut(s) | 1510 |
| BsiHKAI | GWGCWC | 2 cut(s) | 59, 436 |
| BsiSI | CCGG | 1 cut(s) | 2684 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1193, 2545, 2592, 2690 |
| BsmAI | GTCTC | 4 cut(s) | 444, 756, 2065, 2108 |
| BsmBI | CGTCTC | 4 cut(s) | 444, 756, 2065, 2108 |
| BsmI | GAATGC | 1 cut(s) | 859 |
| BsnI | GGCC | 5 cut(s) | 559, 1178, 1355, 2475, 2493 |
| Bsp1286I | GDGCHC | 3 cut(s) | 59, 436, 1542 |
| Bsp1407I | TGTACA | 2 cut(s) | 178, 2712 |
| Bsp19I | CCATGG | 1 cut(s) | 2328 |
| BspACI | CCGC | 2 cut(s) | 227, 898 |
| BspANI | GGCC | 5 cut(s) | 559, 1178, 1355, 2475, 2493 |
| BspCNI | CTCAG | 3 cut(s) | 325, 1012, 2302 |
| BspLI | GGNNCC | 3 cut(s) | 405, 657, 1512 |
| BspMAI | CTGCAG | 2 cut(s) | 208, 1812 |
| BspPI | GGATC | 4 cut(s) | 218, 678, 695, 812 |
| BspT107I | GGYRCC | 1 cut(s) | 1510 |
| BsrDI | GCAATG | 1 cut(s) | 150 |
| BsrGI | TGTACA | 2 cut(s) | 178, 2712 |
| BsrI | ACTGG | 3 cut(s) | 405, 1961, 2075 |
| BssECI | CCNNGG | 8 cut(s) | 41, 93, 658, 1547, 1598, 1902, 2270, 2328 |
| BssSI | CACGAG | 1 cut(s) | 2418 |
| BssT1I | CCWWGG | 4 cut(s) | 41, 93, 1598, 2328 |
| Bst2BI | CACGAG | 1 cut(s) | 2418 |
| Bst6I | CTCTTC | 1 cut(s) | 2538 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 308 |
| BstAUI | TGTACA | 2 cut(s) | 178, 2712 |
| BstC8I | GCNNGC | 3 cut(s) | 231, 857, 2466 |
| BstDSI | CCRYGG | 1 cut(s) | 2328 |
| BstF5I | GGATG | 7 cut(s) | 478, 777, 883, 1030, 1537, 1912, 2440 |
| BstHHI | GCGC | 1 cut(s) | 1719 |
| BstMAI | GTCTC | 4 cut(s) | 444, 756, 2065, 2108 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 308, 500, 509 |
| BstNSI | RCATGY | 2 cut(s) | 985, 2388 |
| BstSFI | CTRYAG | 3 cut(s) | 204, 813, 1808 |
| BstSLI | GKGCMC | 1 cut(s) | 1542 |
| BstV1I | GCAGC | 4 cut(s) | 295, 512, 1390, 2515 |
| BstV2I | GAAGAC | 2 cut(s) | 732, 2356 |
| BstX2I | RGATCY | 2 cut(s) | 700, 817 |
| BstYI | RGATCY | 2 cut(s) | 700, 817 |
| BsuI | GTATCC | 5 cut(s) | 1254, 1282, 1427, 1795, 2632 |
| BsuRI | GGCC | 5 cut(s) | 559, 1178, 1355, 2475, 2493 |
| BtgI | CCRYGG | 1 cut(s) | 2328 |
| BtsCI | GGATG | 7 cut(s) | 478, 777, 883, 1030, 1537, 1912, 2440 |
| BtsI | GCAGTG | 1 cut(s) | 2032 |
| BtsIMutI | CAGTG | 3 cut(s) | 810, 1932, 2032 |
| Cac8I | GCNNGC | 3 cut(s) | 231, 857, 2466 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1193 |
| CfoI | GCGC | 1 cut(s) | 1719 |
| Cfr13I | GGNCC | 4 cut(s) | 655, 1177, 1876, 2325 |
| CseI | GACGC | 1 cut(s) | 773 |
| CsiI | ACCWGGT | 1 cut(s) | 1741 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2368, 2403 |
| DraI | TTTAAA | 2 cut(s) | 376, 1309 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1369 |
| EaeI | YGGCCR | 2 cut(s) | 2473, 2491 |
| Eam1104I | CTCTTC | 1 cut(s) | 2538 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1369 |
| EarI | CTCTTC | 1 cut(s) | 2538 |
| Ecl136II | GAGCTC | 1 cut(s) | 434 |
| Eco130I | CCWWGG | 4 cut(s) | 41, 93, 1598, 2328 |
| Eco147I | AGGCCT | 1 cut(s) | 559 |
| Eco24I | GRGCYC | 1 cut(s) | 436 |
| Eco32I | GATATC | 2 cut(s) | 808, 1479 |
| Eco47I | GGWCC | 3 cut(s) | 655, 1876, 2325 |
| Eco53kI | GAGCTC | 1 cut(s) | 434 |
| Eco57I | CTGAAG | 4 cut(s) | 567, 762, 849, 2562 |
| EcoICRI | GAGCTC | 1 cut(s) | 434 |
| EcoO109I | RGGNCCY | 2 cut(s) | 655, 1876 |
| EcoRI | GAATTC | 1 cut(s) | 1982 |
| EcoRV | GATATC | 2 cut(s) | 808, 1479 |
| EcoT14I | CCWWGG | 4 cut(s) | 41, 93, 1598, 2328 |
| EcoT38I | GRGCYC | 1 cut(s) | 436 |
| ErhI | CCWWGG | 4 cut(s) | 41, 93, 1598, 2328 |
| Esp3I | CGTCTC | 4 cut(s) | 444, 756, 2065, 2108 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 10, 42, 34, 66, 1596, 1628, 2351, 2383 |
| FauNDI | CATATG | 1 cut(s) | 1089 |
| FbaI | TGATCA | 2 cut(s) | 2289, 2665 |
| Fnu4HI | GCNGC | 5 cut(s) | 309, 501, 898, 1379, 2529 |
| FokI | GGATG | 7 cut(s) | 485, 784, 890, 1037, 1544, 1919, 2447 |
| FriOI | GRGCYC | 1 cut(s) | 436 |
| Fsp4HI | GCNGC | 5 cut(s) | 309, 501, 898, 1379, 2529 |
| FspBI | CTAG | 3 cut(s) | 1235, 1254, 1793 |
| GlaI | GCGC | 1 cut(s) | 1718 |
| GluI | GCNGC | 5 cut(s) | 309, 501, 898, 1379, 2529 |
| GsuI | CTGGAG | 5 cut(s) | 269, 480, 488, 681, 1170 |
| HaeIII | GGCC | 5 cut(s) | 559, 1178, 1355, 2475, 2493 |
| HapII | CCGG | 1 cut(s) | 2684 |
| HgaI | GACGC | 1 cut(s) | 773 |
| HhaI | GCGC | 1 cut(s) | 1719 |
| Hin6I | GCGC | 1 cut(s) | 1717 |
| HinP1I | GCGC | 1 cut(s) | 1717 |
| HincII | GTYRAC | 1 cut(s) | 484 |
| HindII | GTYRAC | 1 cut(s) | 484 |
| HpaII | CCGG | 1 cut(s) | 2684 |
| HphI | GGTGA | 5 cut(s) | 1070, 1163, 1414, 2198, 2675 |
| Hpy166II | GTNNAC | 2 cut(s) | 398, 484 |
| Hpy8I | GTNNAC | 2 cut(s) | 398, 484 |
| Hpy99I | CGWCG | 1 cut(s) | 1489 |
| HpyCH4IV | ACGT | 2 cut(s) | 977, 1484 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 308, 500, 509 |
| HpySE526I | ACGT | 2 cut(s) | 977, 1484 |
| HspAI | GCGC | 1 cut(s) | 1717 |
| Ksp22I | TGATCA | 2 cut(s) | 2289, 2665 |
| LmnI | GCTCC | 5 cut(s) | 54, 409, 439, 499, 1189 |
| Lsp1109I | GCAGC | 4 cut(s) | 295, 512, 1390, 2515 |
| LweI | GCATC | 5 cut(s) | 130, 512, 909, 1179, 2344 |
| MabI | ACCWGGT | 1 cut(s) | 1741 |
| MaeI | CTAG | 3 cut(s) | 1235, 1254, 1793 |
| MaeII | ACGT | 2 cut(s) | 977, 1484 |
| MaeIII | GTNAC | 4 cut(s) | 1371, 1837, 1952, 2455 |
| MfeI | CAATTG | 3 cut(s) | 789, 1578, 2469 |
| MflI | RGATCY | 2 cut(s) | 700, 817 |
| MhlI | GDGCHC | 3 cut(s) | 59, 436, 1542 |
| MlsI | TGGCCA | 1 cut(s) | 2493 |
| MluNI | TGGCCA | 1 cut(s) | 2493 |
| MlyI | GAGTC | 5 cut(s) | 16, 470, 2186, 2275, 2430 |
| MmeI | TCCRAC | 1 cut(s) | 2243 |
| Mox20I | TGGCCA | 1 cut(s) | 2493 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1757, 1982 |
| MscI | TGGCCA | 1 cut(s) | 2493 |
| Msp20I | TGGCCA | 1 cut(s) | 2493 |
| MspA1I | CMGCKG | 1 cut(s) | 229 |
| MspI | CCGG | 1 cut(s) | 2684 |
| MunI | CAATTG | 3 cut(s) | 789, 1578, 2469 |
| Mva1269I | GAATGC | 1 cut(s) | 859 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 308, 500, 509 |
| NcoI | CCATGG | 1 cut(s) | 2328 |
| NdeI | CATATG | 1 cut(s) | 1089 |
| NlaIV | GGNNCC | 3 cut(s) | 405, 657, 1512 |
| NmuCI | GTSAC | 3 cut(s) | 1371, 1837, 1952 |
| NspI | RCATGY | 2 cut(s) | 985, 2388 |
| PceI | AGGCCT | 1 cut(s) | 559 |
| PctI | GAATGC | 1 cut(s) | 859 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1757, 1982 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1193, 2592 |
| PfoI | TCCNGGA | 2 cut(s) | 573, 1915 |
| PkrI | GCNGC | 5 cut(s) | 310, 502, 899, 1380, 2530 |
| PleI | GAGTC | 5 cut(s) | 16, 470, 2185, 2274, 2429 |
| PpsI | GAGTC | 5 cut(s) | 16, 470, 2185, 2274, 2429 |
| PpuMI | RGGWCCY | 2 cut(s) | 655, 1876 |
| PshBI | ATTAAT | 1 cut(s) | 2579 |
| PsiI | TTATAA | 1 cut(s) | 1061 |
| Psp124BI | GAGCTC | 1 cut(s) | 436 |
| Psp5II | RGGWCCY | 2 cut(s) | 655, 1876 |
| PspN4I | GGNNCC | 3 cut(s) | 405, 657, 1512 |
| PspPI | GGNCC | 4 cut(s) | 655, 1177, 1876, 2325 |
| PspPPI | RGGWCCY | 2 cut(s) | 655, 1876 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1424, 1456 |
| PstI | CTGCAG | 2 cut(s) | 208, 1812 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1193 |
| PsuI | RGATCY | 2 cut(s) | 700, 817 |
| SacI | GAGCTC | 1 cut(s) | 436 |
| SatI | GCNGC | 5 cut(s) | 309, 501, 898, 1379, 2529 |
| Sau96I | GGNCC | 4 cut(s) | 655, 1177, 1876, 2325 |
| ScaI | AGTACT | 2 cut(s) | 739, 2560 |
| SchI | GAGTC | 5 cut(s) | 16, 470, 2186, 2275, 2430 |
| SduI | GDGCHC | 3 cut(s) | 59, 436, 1542 |
| SexAI | ACCWGGT | 1 cut(s) | 1741 |
| SfaNI | GCATC | 5 cut(s) | 130, 512, 909, 1179, 2344 |
| SfcI | CTRYAG | 3 cut(s) | 204, 813, 1808 |
| SinI | GGWCC | 3 cut(s) | 655, 1876, 2325 |
| SmlI | CTYRAG | 1 cut(s) | 1382 |
| SmoI | CTYRAG | 1 cut(s) | 1382 |
| SpeI | ACTAGT | 1 cut(s) | 1792 |
| SseBI | AGGCCT | 1 cut(s) | 559 |
| SsiI | CCGC | 2 cut(s) | 227, 898 |
| SspI | AATATT | 4 cut(s) | 1284, 1313, 1500, 2612 |
| SspMI | CTAG | 3 cut(s) | 1235, 1254, 1793 |
| SstI | GAGCTC | 1 cut(s) | 436 |
| StuI | AGGCCT | 1 cut(s) | 559 |
| StyI | CCWWGG | 4 cut(s) | 41, 93, 1598, 2328 |
| TaiI | ACGT | 2 cut(s) | 980, 1487 |
| TaqI | TCGA | 3 cut(s) | 1462, 2303, 2375 |
| TaqII | GACCGA | 1 cut(s) | 1359 |
| TatI | WGTACW | 7 cut(s) | 178, 737, 968, 1609, 2052, 2558, 2712 |
| TauI | GCSGC | 1 cut(s) | 900 |
| TscAI | CASTG | 3 cut(s) | 817, 1939, 2032 |
| TseFI | GTSAC | 3 cut(s) | 1371, 1837, 1952 |
| TseI | GCWGC | 4 cut(s) | 308, 500, 1378, 2528 |
| Tsp45I | GTSAC | 3 cut(s) | 1371, 1837, 1952 |
| TspGWI | ACGGA | 3 cut(s) | 324, 426, 2047 |
| TspRI | CASTG | 3 cut(s) | 817, 1939, 2032 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1193, 2592 |
| VpaK11BI | GGWCC | 3 cut(s) | 655, 1876, 2325 |
| VspI | ATTAAT | 1 cut(s) | 2579 |
| XapI | RAATTY | 4 cut(s) | 347, 1982, 2147, 2228 |
| XceI | RCATGY | 2 cut(s) | 985, 2388 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 48 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1757, 1982 |
| XspI | CTAG | 3 cut(s) | 1235, 1254, 1793 |
| ZrmI | AGTACT | 2 cut(s) | 739, 2560 |