SNF2 domain-containing protein CLASSY
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G16390 AT2G16390 AT2G21450 AT2G21450 AT2G21450 AT2G21455 |
| fragaria_vesca | FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 |
| malus_domestica | MD05G1059900.v1.1 MD10G1068100.v1.1 |
| prunus_persica | Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 |
| pyrus_communis | pycom05g05130 pycom10g05390 |
| rosa_chinensis | RchiOBHm_Chr6g0266061 RchiOBHm_Chr6g0266081 |
| rosa_laevigata | RLG00000014118 RLG00000014121 |
| rosa_multiflora | Rmu_sc0000776.1_g000029 Rmu_sc0000776.1_g000037 |
| rosa_roxburghii | Rroxscaffold_174G00435180 Rroxscaffold_174G00435190 Rroxscaffold_7G00201990 Rroxscaffold_7G00202000 |
| rosa_rugosa | Rorug06G0023000 Rorug06G0023700 |
| rosa_samantha | Rh6AG144300 Rh6AG144400 Rh6BG144700 Rh6BG144900 Rh6CG141400 Rh6CG141600 Rh6DG129100 Rh6DG129200 |
| rosa_wichuraiana | Rw1G008890 Rw6G012470 Rw6G012480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1529, 2205 |
| Acc65I | GGTACC | 1 cut(s) | 1746 |
| AccB1I | GGYRCC | 1 cut(s) | 1746 |
| AccII | CGCG | 1 cut(s) | 1300 |
| AccIII | TCCGGA | 2 cut(s) | 145, 1623 |
| AciI | CCGC | 3 cut(s) | 1298, 1300, 2032 |
| AclWI | GGATC | 5 cut(s) | 591, 1062, 1127, 2042, 2433 |
| AcoI | YGGCCR | 3 cut(s) | 633, 726, 870 |
| AcsI | RAATTY | 6 cut(s) | 37, 1382, 1812, 2285, 2446, 2471 |
| AcuI | CTGAAG | 3 cut(s) | 1107, 1199, 2760 |
| AfaI | GTAC | 5 cut(s) | 1276, 1748, 1905, 2049, 2163 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 160, 1508, 2755 |
| AflIII | ACRYGT | 1 cut(s) | 322 |
| AgeI | ACCGGT | 1 cut(s) | 2618 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1684 |
| AjiI | CACGTC | 2 cut(s) | 2801, 2836 |
| AjnI | CCWGG | 7 cut(s) | 529, 1474, 1501, 1553, 2183, 2230, 2812 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 428, 460, 1315, 1347 |
| AleI | CACNNNNGTG | 1 cut(s) | 1286 |
| Alw21I | GWGCWC | 5 cut(s) | 479, 581, 2196, 2835, 2886 |
| Alw26I | GTCTC | 5 cut(s) | 747, 1461, 1692, 2347, 2597 |
| Alw44I | GTGCAC | 1 cut(s) | 2831 |
| AlwI | GGATC | 5 cut(s) | 591, 1062, 1127, 2042, 2433 |
| Ama87I | CYCGRG | 1 cut(s) | 2016 |
| Aor13HI | TCCGGA | 2 cut(s) | 145, 1623 |
| AoxI | GGCC | 4 cut(s) | 633, 726, 870, 2260 |
| ApaLI | GTGCAC | 1 cut(s) | 2831 |
| ApeKI | GCWGC | 4 cut(s) | 362, 620, 2400, 2852 |
| ApoI | RAATTY | 6 cut(s) | 37, 1382, 1812, 2285, 2446, 2471 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2790, 2822 |
| AseI | ATTAAT | 1 cut(s) | 3098 |
| AsiGI | ACCGGT | 1 cut(s) | 2618 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 31, 1619 |
| Asp718I | GGTACC | 1 cut(s) | 1746 |
| AspS9I | GGNCC | 2 cut(s) | 371, 1118 |
| AsuC2I | CCSGG | 3 cut(s) | 874, 2017, 2018 |
| AsuHPI | GGTGA | 6 cut(s) | 95, 2222, 2633, 2664, 2853, 3002 |
| AvaI | CYCGRG | 1 cut(s) | 2016 |
| AvaII | GGWCC | 2 cut(s) | 371, 1118 |
| BaeGI | GKGCMC | 1 cut(s) | 2835 |
| BalI | TGGCCA | 1 cut(s) | 728 |
| BanI | GGYRCC | 1 cut(s) | 1746 |
| BanII | GRGCYC | 1 cut(s) | 479 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2154, 2186 |
| BauI | CACGAG | 1 cut(s) | 2742 |
| BbsI | GAAGAC | 6 cut(s) | 93, 411, 1826, 1957, 2142, 2972 |
| Bbv12I | GWGCWC | 5 cut(s) | 479, 581, 2196, 2835, 2886 |
| BbvI | GCAGC | 4 cut(s) | 374, 632, 2387, 2839 |
| BccI | CCATC | 8 cut(s) | 162, 227, 382, 743, 1144, 2392, 2416, 2450 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 820, 854 |
| BciT130I | CCWGG | 7 cut(s) | 531, 1476, 1503, 1555, 2185, 2232, 2814 |
| BciVI | GTATCC | 3 cut(s) | 195, 285, 1597 |
| BclI | TGATCA | 3 cut(s) | 316, 781, 1162 |
| BcnI | CCSGG | 3 cut(s) | 874, 2017, 2018 |
| BcoDI | GTCTC | 5 cut(s) | 747, 1461, 1692, 2347, 2597 |
| BfaI | CTAG | 7 cut(s) | 50, 206, 641, 848, 1140, 1569, 1830 |
| BfmI | CTRYAG | 4 cut(s) | 306, 1817, 2839, 2970 |
| BfuI | GTATCC | 3 cut(s) | 195, 285, 1597 |
| BglII | AGATCT | 3 cut(s) | 1978, 2167, 2974 |
| BisI | GCNGC | 5 cut(s) | 363, 621, 1298, 2401, 2853 |
| BlsI | GCNGC | 5 cut(s) | 364, 622, 1299, 2402, 2854 |
| Bme18I | GGWCC | 2 cut(s) | 371, 1118 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1684 |
| BmeT110I | CYCGRG | 1 cut(s) | 2016 |
| BmgBI | CACGTC | 2 cut(s) | 2801, 2836 |
| BmgT120I | GGNCC | 2 cut(s) | 371, 1118 |
| BmiI | GGNNCC | 7 cut(s) | 138, 261, 294, 450, 1748, 2336, 2698 |
| BmrI | ACTGGG | 1 cut(s) | 1368 |
| BmuI | ACTGGG | 1 cut(s) | 1368 |
| BpiI | GAAGAC | 6 cut(s) | 93, 411, 1826, 1957, 2142, 2972 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1319, 1351 |
| BpuEI | CTTGAG | 1 cut(s) | 2108 |
| BpuMI | CCSGG | 3 cut(s) | 874, 2017, 2018 |
| Bsa29I | ATCGAT | 1 cut(s) | 2428 |
| BsaAI | YACGTR | 1 cut(s) | 1608 |
| BsaI | GGTCTC | 1 cut(s) | 1692 |
| BsaWI | WCCGGW | 4 cut(s) | 145, 1623, 2618, 2674 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 167, 197 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 160, 1508, 2755 |
| Bse118I | RCCGGY | 2 cut(s) | 635, 2618 |
| Bse1I | ACTGG | 4 cut(s) | 138, 1252, 1363, 2526 |
| Bse3DI | GCAATG | 1 cut(s) | 3070 |
| BseAI | TCCGGA | 2 cut(s) | 145, 1623 |
| BseBI | CCWGG | 7 cut(s) | 531, 1476, 1503, 1555, 2185, 2232, 2814 |
| BseCI | ATCGAT | 1 cut(s) | 2428 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 160, 1508, 2755 |
| BseMI | GCAATG | 1 cut(s) | 3070 |
| BseMII | CTCAG | 5 cut(s) | 977, 1317, 1944, 2382, 2922 |
| BseNI | ACTGG | 4 cut(s) | 138, 1252, 1363, 2526 |
| BseRI | GAGGAG | 7 cut(s) | 115, 132, 288, 291, 2100, 2332, 2882 |
| BseSI | GKGCMC | 1 cut(s) | 2835 |
| BseXI | GCAGC | 4 cut(s) | 374, 632, 2387, 2839 |
| BsgI | GTGCAG | 2 cut(s) | 639, 2386 |
| Bsh1236I | CGCG | 1 cut(s) | 1300 |
| BshFI | GGCC | 4 cut(s) | 635, 728, 872, 2262 |
| BshNI | GGYRCC | 1 cut(s) | 1746 |
| BshTI | ACCGGT | 1 cut(s) | 2618 |
| BshVI | ATCGAT | 1 cut(s) | 2428 |
| BsiHKAI | GWGCWC | 5 cut(s) | 479, 581, 2196, 2835, 2886 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2016 |
| BsiSI | CCGG | 7 cut(s) | 146, 636, 873, 1624, 2017, 2619, 2675 |
| BslFI | GGGAC | 1 cut(s) | 1810 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 160, 1508, 2755 |
| BsmAI | GTCTC | 5 cut(s) | 747, 1461, 1692, 2347, 2597 |
| BsmFI | GGGAC | 1 cut(s) | 1810 |
| BsmI | GAATGC | 3 cut(s) | 505, 1485, 2328 |
| BsnI | GGCC | 4 cut(s) | 635, 728, 872, 2262 |
| Bso31I | GGTCTC | 1 cut(s) | 1692 |
| BsoBI | CYCGRG | 1 cut(s) | 2016 |
| Bsp1286I | GDGCHC | 5 cut(s) | 479, 581, 2196, 2835, 2886 |
| Bsp13I | TCCGGA | 2 cut(s) | 145, 1623 |
| Bsp1407I | TGTACA | 1 cut(s) | 2161 |
| BspACI | CCGC | 3 cut(s) | 1298, 1300, 2032 |
| BspANI | GGCC | 4 cut(s) | 635, 728, 872, 2262 |
| BspCNI | CTCAG | 5 cut(s) | 978, 1318, 1943, 2383, 2923 |
| BspDI | ATCGAT | 1 cut(s) | 2428 |
| BspEI | TCCGGA | 2 cut(s) | 145, 1623 |
| BspFNI | CGCG | 1 cut(s) | 1300 |
| BspHI | TCATGA | 2 cut(s) | 430, 2037 |
| BspLI | GGNNCC | 7 cut(s) | 138, 261, 294, 450, 1748, 2336, 2698 |
| BspMAI | CTGCAG | 1 cut(s) | 1821 |
| BspPI | GGATC | 5 cut(s) | 591, 1062, 1127, 2042, 2433 |
| BspQI | GCTCTTC | 2 cut(s) | 467, 1721 |
| BspT107I | GGYRCC | 1 cut(s) | 1746 |
| BspTNI | GGTCTC | 1 cut(s) | 1692 |
| BsrDI | GCAATG | 1 cut(s) | 3070 |
| BsrFI | RCCGGY | 2 cut(s) | 635, 2618 |
| BsrGI | TGTACA | 1 cut(s) | 2161 |
| BsrI | ACTGG | 4 cut(s) | 138, 1252, 1363, 2526 |
| BssAI | RCCGGY | 2 cut(s) | 635, 2618 |
| BssSI | CACGAG | 1 cut(s) | 2742 |
| BssT1I | CCWWGG | 4 cut(s) | 1101, 1671, 1862, 2895 |
| Bst2BI | CACGAG | 1 cut(s) | 2742 |
| Bst2UI | CCWGG | 7 cut(s) | 531, 1476, 1503, 1555, 2185, 2232, 2814 |
| Bst4CI | ACNGT | 8 cut(s) | 11, 194, 569, 1695, 1755, 2073, 2407, 2971 |
| Bst6I | CTCTTC | 3 cut(s) | 467, 705, 1721 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 215 |
| BstAUI | TGTACA | 1 cut(s) | 2161 |
| BstBAI | YACGTR | 1 cut(s) | 1608 |
| BstC8I | GCNNGC | 3 cut(s) | 694, 2490, 2790 |
| BstDSI | CCRYGG | 1 cut(s) | 1298 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1506 |
| BstFNI | CGCG | 1 cut(s) | 1300 |
| BstMAI | GTCTC | 5 cut(s) | 747, 1461, 1692, 2347, 2597 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 215, 1297, 1779 |
| BstNI | CCWGG | 7 cut(s) | 531, 1476, 1503, 1555, 2185, 2232, 2814 |
| BstNSI | RCATGY | 1 cut(s) | 3089 |
| BstSFI | CTRYAG | 4 cut(s) | 306, 1817, 2839, 2970 |
| BstSLI | GKGCMC | 1 cut(s) | 2835 |
| BstUI | CGCG | 1 cut(s) | 1300 |
| BstV1I | GCAGC | 4 cut(s) | 374, 632, 2387, 2839 |
| BstV2I | GAAGAC | 6 cut(s) | 93, 411, 1826, 1957, 2142, 2972 |
| BstX2I | RGATCY | 4 cut(s) | 1054, 1978, 2167, 2974 |
| BstYI | RGATCY | 4 cut(s) | 1054, 1978, 2167, 2974 |
| Bsu15I | ATCGAT | 1 cut(s) | 2428 |
| BsuI | GTATCC | 3 cut(s) | 195, 285, 1597 |
| BsuRI | GGCC | 4 cut(s) | 635, 728, 872, 2262 |
| BsuTUI | ATCGAT | 1 cut(s) | 2428 |
| BtgI | CCRYGG | 1 cut(s) | 1298 |
| BtgZI | GCGATG | 1 cut(s) | 205 |
| BtrI | CACGTC | 2 cut(s) | 2801, 2836 |
| BtsIMutI | CAGTG | 2 cut(s) | 784, 2784 |
| Cac8I | GCNNGC | 3 cut(s) | 694, 2490, 2790 |
| CciI | TCATGA | 2 cut(s) | 430, 2037 |
| Cfr10I | RCCGGY | 2 cut(s) | 635, 2618 |
| Cfr13I | GGNCC | 2 cut(s) | 371, 1118 |
| Cfr42I | CCGCGG | 1 cut(s) | 1301 |
| Cfr9I | CCCGGG | 1 cut(s) | 2016 |
| ClaI | ATCGAT | 1 cut(s) | 2428 |
| CsiI | ACCWGGT | 1 cut(s) | 2812 |
| Csp6I | GTAC | 5 cut(s) | 1275, 1747, 1904, 2048, 2162 |
| CspAI | ACCGGT | 1 cut(s) | 2618 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 252, 287, 1459, 1494 |
| CviQI | GTAC | 5 cut(s) | 1275, 1747, 1904, 2048, 2162 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1684 |
| EaeI | YGGCCR | 3 cut(s) | 633, 726, 870 |
| Eam1104I | CTCTTC | 3 cut(s) | 467, 705, 1721 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1684 |
| EarI | CTCTTC | 3 cut(s) | 467, 705, 1721 |
| Ecl136II | GAGCTC | 1 cut(s) | 477 |
| Eco130I | CCWWGG | 4 cut(s) | 1101, 1671, 1862, 2895 |
| Eco24I | GRGCYC | 1 cut(s) | 479 |
| Eco31I | GGTCTC | 1 cut(s) | 1692 |
| Eco32I | GATATC | 3 cut(s) | 2055, 2366, 2907 |
| Eco47I | GGWCC | 2 cut(s) | 371, 1118 |
| Eco53kI | GAGCTC | 1 cut(s) | 477 |
| Eco57I | CTGAAG | 3 cut(s) | 1107, 1199, 2760 |
| Eco88I | CYCGRG | 1 cut(s) | 2016 |
| EcoICRI | GAGCTC | 1 cut(s) | 477 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1506 |
| EcoRII | CCWGG | 7 cut(s) | 529, 1474, 1501, 1553, 2183, 2230, 2812 |
| EcoRV | GATATC | 3 cut(s) | 2055, 2366, 2907 |
| EcoT14I | CCWWGG | 4 cut(s) | 1101, 1671, 1862, 2895 |
| EcoT22I | ATGCAT | 4 cut(s) | 552, 1069, 2352, 3087 |
| EcoT38I | GRGCYC | 1 cut(s) | 479 |
| ErhI | CCWWGG | 4 cut(s) | 1101, 1671, 1862, 2895 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 428, 460 |
| FaqI | GGGAC | 1 cut(s) | 1810 |
| FauI | CCCGC | 1 cut(s) | 1293 |
| FauNDI | CATATG | 1 cut(s) | 1413 |
| FbaI | TGATCA | 3 cut(s) | 316, 781, 1162 |
| Fnu4HI | GCNGC | 5 cut(s) | 363, 621, 1298, 2401, 2853 |
| FriOI | GRGCYC | 1 cut(s) | 479 |
| Fsp4HI | GCNGC | 5 cut(s) | 363, 621, 1298, 2401, 2853 |
| FspBI | CTAG | 7 cut(s) | 50, 206, 641, 848, 1140, 1569, 1830 |
| GluI | GCNGC | 5 cut(s) | 363, 621, 1298, 2401, 2853 |
| HaeIII | GGCC | 4 cut(s) | 635, 728, 872, 2262 |
| HapII | CCGG | 7 cut(s) | 146, 636, 873, 1624, 2017, 2619, 2675 |
| HincII | GTYRAC | 1 cut(s) | 2616 |
| HindII | GTYRAC | 1 cut(s) | 2616 |
| HindIII | AAGCTT | 1 cut(s) | 1349 |
| HinfI | GANTC | 9 cut(s) | 1344, 2090, 2430, 2501, 2590, 2721, 2782, 2858, 2984 |
| HpaI | GTTAAC | 1 cut(s) | 2616 |
| HpaII | CCGG | 7 cut(s) | 146, 636, 873, 1624, 2017, 2619, 2675 |
| HphI | GGTGA | 6 cut(s) | 95, 2222, 2633, 2664, 2853, 3002 |
| Hpy166II | GTNNAC | 6 cut(s) | 1277, 2247, 2616, 2833, 2928, 2942 |
| Hpy8I | GTNNAC | 6 cut(s) | 1277, 2247, 2616, 2833, 2928, 2942 |
| HpyCH4III | ACNGT | 8 cut(s) | 11, 194, 569, 1695, 1755, 2073, 2407, 2971 |
| HpyCH4IV | ACGT | 4 cut(s) | 322, 1607, 2800, 2835 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 215, 1297, 1779 |
| HpySE526I | ACGT | 4 cut(s) | 322, 1607, 2800, 2835 |
| Kpn2I | TCCGGA | 2 cut(s) | 145, 1623 |
| KpnI | GGTACC | 1 cut(s) | 1750 |
| Ksp22I | TGATCA | 3 cut(s) | 316, 781, 1162 |
| KspAI | GTTAAC | 1 cut(s) | 2616 |
| KspI | CCGCGG | 1 cut(s) | 1301 |
| LguI | GCTCTTC | 2 cut(s) | 467, 1721 |
| LmnI | GCTCC | 7 cut(s) | 259, 292, 448, 829, 2199, 2334, 2735 |
| Lsp1109I | GCAGC | 4 cut(s) | 374, 632, 2387, 2839 |
| MabI | ACCWGGT | 1 cut(s) | 2812 |
| MaeI | CTAG | 7 cut(s) | 50, 206, 641, 848, 1140, 1569, 1830 |
| MaeII | ACGT | 4 cut(s) | 322, 1607, 2800, 2835 |
| MaeIII | GTNAC | 5 cut(s) | 656, 1544, 1853, 2210, 2779 |
| MflI | RGATCY | 4 cut(s) | 1054, 1978, 2167, 2974 |
| MhlI | GDGCHC | 5 cut(s) | 479, 581, 2196, 2835, 2886 |
| MlsI | TGGCCA | 1 cut(s) | 728 |
| MluNI | TGGCCA | 1 cut(s) | 728 |
| MlyI | GAGTC | 4 cut(s) | 2599, 2776, 2852, 2978 |
| MmeI | TCCRAC | 4 cut(s) | 30, 498, 820, 2567 |
| Mox20I | TGGCCA | 1 cut(s) | 728 |
| Mph1103I | ATGCAT | 4 cut(s) | 552, 1069, 2352, 3087 |
| MroI | TCCGGA | 2 cut(s) | 145, 1623 |
| MroXI | GAANNNNTTC | 2 cut(s) | 31, 1619 |
| MscI | TGGCCA | 1 cut(s) | 728 |
| MslI | CAYNNNNRTG | 7 cut(s) | 170, 332, 663, 858, 1093, 1286, 3080 |
| Msp20I | TGGCCA | 1 cut(s) | 728 |
| MspA1I | CMGCKG | 2 cut(s) | 1127, 1300 |
| MspI | CCGG | 7 cut(s) | 146, 636, 873, 1624, 2017, 2619, 2675 |
| Mva1269I | GAATGC | 3 cut(s) | 505, 1485, 2328 |
| MvaI | CCWGG | 7 cut(s) | 531, 1476, 1503, 1555, 2185, 2232, 2814 |
| MvnI | CGCG | 1 cut(s) | 1300 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 215, 1297, 1779 |
| NciI | CCSGG | 3 cut(s) | 874, 2017, 2018 |
| NdeI | CATATG | 1 cut(s) | 1413 |
| NlaIV | GGNNCC | 7 cut(s) | 138, 261, 294, 450, 1748, 2336, 2698 |
| NmeAIII | GCCGAG | 3 cut(s) | 1832, 2238, 2764 |
| NmuCI | GTSAC | 4 cut(s) | 656, 1853, 2210, 2779 |
| NsiI | ATGCAT | 4 cut(s) | 552, 1069, 2352, 3087 |
| NspI | RCATGY | 1 cut(s) | 3089 |
| OliI | CACNNNNGTG | 1 cut(s) | 1286 |
| PagI | TCATGA | 2 cut(s) | 430, 2037 |
| PciSI | GCTCTTC | 2 cut(s) | 467, 1721 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2806 |
| PctI | GAATGC | 3 cut(s) | 505, 1485, 2328 |
| PdmI | GAANNNNTTC | 2 cut(s) | 31, 1619 |
| PfeI | GAWTC | 5 cut(s) | 1344, 2090, 2430, 2501, 2721 |
| PflFI | GACNNNGTC | 1 cut(s) | 2814 |
| PinAI | ACCGGT | 1 cut(s) | 2618 |
| PkrI | GCNGC | 5 cut(s) | 364, 622, 1299, 2402, 2854 |
| PleI | GAGTC | 4 cut(s) | 2598, 2776, 2852, 2978 |
| PpsI | GAGTC | 4 cut(s) | 2598, 2776, 2852, 2978 |
| Ppu21I | YACGTR | 1 cut(s) | 1608 |
| PshBI | ATTAAT | 1 cut(s) | 3098 |
| PsiI | TTATAA | 2 cut(s) | 1529, 2205 |
| Psp124BI | GAGCTC | 1 cut(s) | 479 |
| Psp6I | CCWGG | 7 cut(s) | 529, 1474, 1501, 1553, 2183, 2230, 2812 |
| PspGI | CCWGG | 7 cut(s) | 529, 1474, 1501, 1553, 2183, 2230, 2812 |
| PspN4I | GGNNCC | 7 cut(s) | 138, 261, 294, 450, 1748, 2336, 2698 |
| PspPI | GGNCC | 2 cut(s) | 371, 1118 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1739, 1771 |
| PstI | CTGCAG | 1 cut(s) | 1821 |
| PsuI | RGATCY | 4 cut(s) | 1054, 1978, 2167, 2974 |
| PsyI | GACNNNGTC | 1 cut(s) | 2814 |
| PvuII | CAGCTG | 1 cut(s) | 1127 |
| RsaI | GTAC | 5 cut(s) | 1276, 1748, 1905, 2049, 2163 |
| RsaNI | GTAC | 5 cut(s) | 1275, 1747, 1904, 2048, 2162 |
| RseI | CAYNNNNRTG | 7 cut(s) | 170, 332, 663, 858, 1093, 1286, 3080 |
| SacI | GAGCTC | 1 cut(s) | 479 |
| SacII | CCGCGG | 1 cut(s) | 1301 |
| SapI | GCTCTTC | 2 cut(s) | 467, 1721 |
| SatI | GCNGC | 5 cut(s) | 363, 621, 1298, 2401, 2853 |
| Sau96I | GGNCC | 2 cut(s) | 371, 1118 |
| SchI | GAGTC | 4 cut(s) | 2599, 2776, 2852, 2978 |
| SduI | GDGCHC | 5 cut(s) | 479, 581, 2196, 2835, 2886 |
| SexAI | ACCWGGT | 1 cut(s) | 2812 |
| SfcI | CTRYAG | 4 cut(s) | 306, 1817, 2839, 2970 |
| Sfr303I | CCGCGG | 1 cut(s) | 1301 |
| SgrBI | CCGCGG | 1 cut(s) | 1301 |
| SinI | GGWCC | 2 cut(s) | 371, 1118 |
| SmaI | CCCGGG | 1 cut(s) | 2018 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 170, 332, 663, 858, 1093, 1286, 3080 |
| SmlI | CTYRAG | 1 cut(s) | 2123 |
| SmoI | CTYRAG | 1 cut(s) | 2123 |
| SsiI | CCGC | 3 cut(s) | 1298, 1300, 2032 |
| SspI | AATATT | 1 cut(s) | 358 |
| SspMI | CTAG | 7 cut(s) | 50, 206, 641, 848, 1140, 1569, 1830 |
| SstI | GAGCTC | 1 cut(s) | 479 |
| StyI | CCWWGG | 4 cut(s) | 1101, 1671, 1862, 2895 |
| TaaI | ACNGT | 8 cut(s) | 11, 194, 569, 1695, 1755, 2073, 2407, 2971 |
| TaiI | ACGT | 4 cut(s) | 325, 1610, 2803, 2838 |
| TaqI | TCGA | 5 cut(s) | 110, 2173, 2428, 2809, 2922 |
| TaqII | GACCGA | 1 cut(s) | 1106 |
| TatI | WGTACW | 4 cut(s) | 1274, 1903, 2047, 2161 |
| TauI | GCSGC | 1 cut(s) | 1300 |
| TfiI | GAWTC | 5 cut(s) | 1344, 2090, 2430, 2501, 2721 |
| TscAI | CASTG | 2 cut(s) | 784, 2784 |
| TseFI | GTSAC | 4 cut(s) | 656, 1853, 2210, 2779 |
| TseI | GCWGC | 4 cut(s) | 362, 620, 2400, 2852 |
| Tsp45I | GTSAC | 4 cut(s) | 656, 1853, 2210, 2779 |
| TspGWI | ACGGA | 1 cut(s) | 596 |
| TspMI | CCCGGG | 1 cut(s) | 2016 |
| TspRI | CASTG | 2 cut(s) | 784, 2784 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2814 |
| VneI | GTGCAC | 1 cut(s) | 2831 |
| VpaK11BI | GGWCC | 2 cut(s) | 371, 1118 |
| VspI | ATTAAT | 1 cut(s) | 3098 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1506 |
| XapI | RAATTY | 6 cut(s) | 37, 1382, 1812, 2285, 2446, 2471 |
| XbaI | TCTAGA | 1 cut(s) | 640 |
| XceI | RCATGY | 1 cut(s) | 3089 |
| XmaI | CCCGGG | 1 cut(s) | 2016 |
| XmnI | GAANNNNTTC | 2 cut(s) | 31, 1619 |
| XspI | CTAG | 7 cut(s) | 50, 206, 641, 848, 1140, 1569, 1830 |
| Zsp2I | ATGCAT | 4 cut(s) | 552, 1069, 2352, 3087 |