SNF2 domain-containing protein CLASSY
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G16390 AT2G16390 AT2G21450 AT2G21450 AT2G21450 AT2G21455 |
| fragaria_vesca | FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 |
| malus_domestica | MD05G1059900.v1.1 MD10G1068100.v1.1 |
| prunus_persica | Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 |
| pyrus_communis | pycom05g05130 pycom10g05390 |
| rosa_chinensis | RchiOBHm_Chr6g0266061 RchiOBHm_Chr6g0266081 |
| rosa_laevigata | RLG00000014118 RLG00000014121 |
| rosa_multiflora | Rmu_sc0000776.1_g000029 Rmu_sc0000776.1_g000037 |
| rosa_roxburghii | Rroxscaffold_174G00435180 Rroxscaffold_174G00435190 Rroxscaffold_7G00201990 Rroxscaffold_7G00202000 |
| rosa_rugosa | Rorug06G0023000 Rorug06G0023700 |
| rosa_samantha | Rh6AG144300 Rh6AG144400 Rh6BG144700 Rh6BG144900 Rh6CG141400 Rh6CG141600 Rh6DG129100 Rh6DG129200 |
| rosa_wichuraiana | Rw1G008890 Rw6G012470 Rw6G012480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1375 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1058, 2457 |
| AccI | GTMKAC | 2 cut(s) | 330, 681 |
| AciI | CCGC | 2 cut(s) | 763, 1124 |
| AclWI | GGATC | 3 cut(s) | 71, 525, 560 |
| AcoI | YGGCCR | 1 cut(s) | 2338 |
| AcsI | RAATTY | 4 cut(s) | 1835, 1847, 2012, 2093 |
| AcuI | CTGAAG | 3 cut(s) | 627, 714, 930 |
| AcvI | CACGTG | 1 cut(s) | 1504 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1058, 2410, 2457, 2555 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1234 |
| AhlI | ACTAGT | 1 cut(s) | 1657 |
| AjnI | CCWGG | 8 cut(s) | 568, 1024, 1051, 1356, 1767, 1780, 1820, 2353 |
| AluBI | AGCT | 6 cut(s) | 86, 281, 1246, 1631, 1777, 2393 |
| AluI | AGCT | 6 cut(s) | 86, 281, 1246, 1631, 1777, 2393 |
| Alw21I | GWGCWC | 1 cut(s) | 283 |
| Alw26I | GTCTC | 3 cut(s) | 1661, 1930, 1973 |
| AlwI | GGATC | 3 cut(s) | 71, 525, 560 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1058, 1246 |
| Ama87I | CYCGRG | 1 cut(s) | 2135 |
| AoxI | GGCC | 4 cut(s) | 404, 1041, 1218, 2338 |
| ApeKI | GCWGC | 3 cut(s) | 347, 1243, 2393 |
| ApoI | RAATTY | 4 cut(s) | 1835, 1847, 2012, 2093 |
| AseI | ATTAAT | 2 cut(s) | 788, 2444 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1194, 1622, 1847 |
| AspA2I | CCTAGG | 1 cut(s) | 1463 |
| AspLEI | GCGC | 2 cut(s) | 1584, 1820 |
| AspS9I | GGNCC | 3 cut(s) | 1042, 1741, 2190 |
| AsuC2I | CCSGG | 3 cut(s) | 2136, 2137, 2326 |
| AsuHPI | GGTGA | 6 cut(s) | 523, 935, 1028, 1714, 2063, 2540 |
| AvaI | CYCGRG | 1 cut(s) | 2135 |
| AvaII | GGWCC | 2 cut(s) | 1741, 2190 |
| AvrII | CCTAGG | 1 cut(s) | 1463 |
| AxyI | CCTNAGG | 1 cut(s) | 1140 |
| BaeGI | GKGCMC | 1 cut(s) | 1407 |
| BanI | GGYRCC | 1 cut(s) | 1375 |
| BanII | GRGCYC | 1 cut(s) | 283 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 2561 |
| BauI | CACGAG | 1 cut(s) | 2283 |
| BbrPI | CACGTG | 1 cut(s) | 1504 |
| BbsI | GAAGAC | 1 cut(s) | 158 |
| Bbv12I | GWGCWC | 1 cut(s) | 283 |
| BbvI | GCAGC | 3 cut(s) | 359, 1255, 2380 |
| BceAI | ACGGC | 1 cut(s) | 2325 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 320, 354, 1394, 1428 |
| BciT130I | CCWGG | 8 cut(s) | 570, 1026, 1053, 1358, 1769, 1782, 1822, 2355 |
| BciVI | GTATCC | 5 cut(s) | 1119, 1147, 1292, 1675, 2497 |
| BclI | TGATCA | 1 cut(s) | 2154 |
| BcnI | CCSGG | 3 cut(s) | 2136, 2137, 2326 |
| BcoDI | GTCTC | 3 cut(s) | 1661, 1930, 1973 |
| BcuI | ACTAGT | 1 cut(s) | 1657 |
| BfaI | CTAG | 5 cut(s) | 290, 1100, 1119, 1464, 1658 |
| BfmI | CTRYAG | 3 cut(s) | 57, 678, 1673 |
| BfoI | RGCGCY | 1 cut(s) | 1821 |
| BfuI | GTATCC | 5 cut(s) | 1119, 1147, 1292, 1675, 2497 |
| BisI | GCNGC | 4 cut(s) | 348, 763, 1244, 2394 |
| BlnI | CCTAGG | 1 cut(s) | 1463 |
| BlsI | GCNGC | 4 cut(s) | 349, 764, 1245, 2395 |
| BmcAI | AGTACT | 2 cut(s) | 180, 604 |
| Bme18I | GGWCC | 2 cut(s) | 1741, 2190 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1234 |
| BmeT110I | CYCGRG | 1 cut(s) | 2135 |
| BmgT120I | GGNCC | 3 cut(s) | 1042, 1741, 2190 |
| BmiI | GGNNCC | 3 cut(s) | 258, 1377, 2239 |
| BmsI | GCATC | 6 cut(s) | 359, 619, 774, 1044, 2209, 2288 |
| BpiI | GAAGAC | 1 cut(s) | 158 |
| BpmI | CTGGAG | 3 cut(s) | 122, 1035, 1268 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2030, 2223 |
| BpuMI | CCSGG | 3 cut(s) | 2136, 2137, 2326 |
| BsaAI | YACGTR | 1 cut(s) | 1504 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2304 |
| BsaJI | CCNNGG | 6 cut(s) | 1052, 1412, 1463, 1767, 2135, 2193 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1058, 2410, 2457, 2555 |
| Bse1I | ACTGG | 2 cut(s) | 1940, 2549 |
| Bse21I | CCTNAGG | 1 cut(s) | 1140 |
| Bse3DI | GCAATG | 1 cut(s) | 1443 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2304 |
| BseBI | CCWGG | 8 cut(s) | 570, 1026, 1053, 1358, 1769, 1782, 1822, 2355 |
| BseDI | CCNNGG | 6 cut(s) | 1052, 1412, 1463, 1767, 2135, 2193 |
| BseGI | GGATG | 8 cut(s) | 322, 466, 642, 676, 1402, 1777, 1972, 2305 |
| BseJI | GATNNNNATC | 1 cut(s) | 2304 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1058, 2410, 2457, 2555 |
| BseMI | GCAATG | 1 cut(s) | 1443 |
| BseMII | CTCAG | 3 cut(s) | 179, 876, 2166 |
| BseNI | ACTGG | 2 cut(s) | 1940, 2549 |
| BseRI | GAGGAG | 2 cut(s) | 1300, 1679 |
| BseSI | GKGCMC | 1 cut(s) | 1407 |
| BseXI | GCAGC | 3 cut(s) | 359, 1255, 2380 |
| BsgI | GTGCAG | 1 cut(s) | 1889 |
| BshFI | GGCC | 4 cut(s) | 406, 1043, 1220, 2340 |
| BshNI | GGYRCC | 1 cut(s) | 1375 |
| BsiHKAI | GWGCWC | 1 cut(s) | 283 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2135 |
| BsiSI | CCGG | 3 cut(s) | 344, 2136, 2326 |
| BslFI | GGGAC | 1 cut(s) | 2118 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1058, 2410, 2457, 2555 |
| BsmAI | GTCTC | 3 cut(s) | 1661, 1930, 1973 |
| BsmBI | CGTCTC | 1 cut(s) | 1930 |
| BsmFI | GGGAC | 1 cut(s) | 2118 |
| BsmI | GAATGC | 1 cut(s) | 724 |
| BsnI | GGCC | 4 cut(s) | 406, 1043, 1220, 2340 |
| BsoBI | CYCGRG | 1 cut(s) | 2135 |
| Bsp1286I | GDGCHC | 2 cut(s) | 283, 1407 |
| Bsp1407I | TGTACA | 2 cut(s) | 34, 2577 |
| Bsp19I | CCATGG | 1 cut(s) | 2193 |
| BspACI | CCGC | 2 cut(s) | 763, 1124 |
| BspANI | GGCC | 4 cut(s) | 406, 1043, 1220, 2340 |
| BspCNI | CTCAG | 3 cut(s) | 178, 877, 2167 |
| BspHI | TCATGA | 1 cut(s) | 432 |
| BspLI | GGNNCC | 3 cut(s) | 258, 1377, 2239 |
| BspMAI | CTGCAG | 2 cut(s) | 61, 1677 |
| BspPI | GGATC | 3 cut(s) | 71, 525, 560 |
| BspT107I | GGYRCC | 1 cut(s) | 1375 |
| BsrDI | GCAATG | 1 cut(s) | 1443 |
| BsrGI | TGTACA | 2 cut(s) | 34, 2577 |
| BsrI | ACTGG | 2 cut(s) | 1940, 2549 |
| BssECI | CCNNGG | 6 cut(s) | 1052, 1412, 1463, 1767, 2135, 2193 |
| BssSI | CACGAG | 1 cut(s) | 2283 |
| BssT1I | CCWWGG | 2 cut(s) | 1463, 2193 |
| Bst2BI | CACGAG | 1 cut(s) | 2283 |
| Bst2UI | CCWGG | 8 cut(s) | 570, 1026, 1053, 1358, 1769, 1782, 1822, 2355 |
| Bst6I | CTCTTC | 2 cut(s) | 1271, 2403 |
| BstAUI | TGTACA | 2 cut(s) | 34, 2577 |
| BstBAI | YACGTR | 1 cut(s) | 1504 |
| BstC8I | GCNNGC | 2 cut(s) | 195, 2331 |
| BstDSI | CCRYGG | 1 cut(s) | 2193 |
| BstF5I | GGATG | 8 cut(s) | 322, 466, 642, 676, 1402, 1777, 1972, 2305 |
| BstH2I | RGCGCY | 1 cut(s) | 1821 |
| BstHHI | GCGC | 2 cut(s) | 1584, 1820 |
| BstMAI | GTCTC | 3 cut(s) | 1661, 1930, 1973 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 347 |
| BstNI | CCWGG | 8 cut(s) | 570, 1026, 1053, 1358, 1769, 1782, 1822, 2355 |
| BstNSI | RCATGY | 2 cut(s) | 850, 2253 |
| BstSFI | CTRYAG | 3 cut(s) | 57, 678, 1673 |
| BstSLI | GKGCMC | 1 cut(s) | 1407 |
| BstV1I | GCAGC | 3 cut(s) | 359, 1255, 2380 |
| BstV2I | GAAGAC | 1 cut(s) | 158 |
| BstX2I | RGATCY | 1 cut(s) | 565 |
| BstYI | RGATCY | 1 cut(s) | 565 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1140 |
| BsuI | GTATCC | 5 cut(s) | 1119, 1147, 1292, 1675, 2497 |
| BsuRI | GGCC | 4 cut(s) | 406, 1043, 1220, 2340 |
| BtgI | CCRYGG | 1 cut(s) | 2193 |
| BtsCI | GGATG | 8 cut(s) | 322, 466, 642, 676, 1402, 1777, 1972, 2305 |
| BtsI | GCAGTG | 1 cut(s) | 1897 |
| BtsIMutI | CAGTG | 7 cut(s) | 72, 124, 675, 1425, 1797, 1897, 2556 |
| Cac8I | GCNNGC | 2 cut(s) | 195, 2331 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1058, 1246 |
| CciI | TCATGA | 1 cut(s) | 432 |
| CfoI | GCGC | 2 cut(s) | 1584, 1820 |
| Cfr13I | GGNCC | 3 cut(s) | 1042, 1741, 2190 |
| Cfr9I | CCCGGG | 1 cut(s) | 2135 |
| CsiI | ACCWGGT | 1 cut(s) | 2353 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2233, 2268, 2506, 2541 |
| DraI | TTTAAA | 2 cut(s) | 229, 1174 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1234 |
| EaeI | YGGCCR | 1 cut(s) | 2338 |
| Eam1104I | CTCTTC | 2 cut(s) | 1271, 2403 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1234 |
| EarI | CTCTTC | 2 cut(s) | 1271, 2403 |
| Ecl136II | GAGCTC | 1 cut(s) | 281 |
| Eco130I | CCWWGG | 2 cut(s) | 1463, 2193 |
| Eco147I | AGGCCT | 1 cut(s) | 406 |
| Eco24I | GRGCYC | 1 cut(s) | 283 |
| Eco32I | GATATC | 1 cut(s) | 1344 |
| Eco47I | GGWCC | 2 cut(s) | 1741, 2190 |
| Eco53kI | GAGCTC | 1 cut(s) | 281 |
| Eco57I | CTGAAG | 3 cut(s) | 627, 714, 930 |
| Eco72I | CACGTG | 1 cut(s) | 1504 |
| Eco81I | CCTNAGG | 1 cut(s) | 1140 |
| Eco88I | CYCGRG | 1 cut(s) | 2135 |
| EcoICRI | GAGCTC | 1 cut(s) | 281 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1741 |
| EcoRI | GAATTC | 1 cut(s) | 1847 |
| EcoRII | CCWGG | 8 cut(s) | 568, 1024, 1051, 1356, 1767, 1780, 1820, 2353 |
| EcoRV | GATATC | 1 cut(s) | 1344 |
| EcoT14I | CCWWGG | 2 cut(s) | 1463, 2193 |
| EcoT22I | ATGCAT | 3 cut(s) | 24, 223, 634 |
| EcoT38I | GRGCYC | 1 cut(s) | 283 |
| ErhI | CCWWGG | 2 cut(s) | 1463, 2193 |
| Esp3I | CGTCTC | 1 cut(s) | 1930 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 732, 764, 1461, 1493, 2216, 2248 |
| FaqI | GGGAC | 1 cut(s) | 2118 |
| FauNDI | CATATG | 1 cut(s) | 954 |
| FbaI | TGATCA | 1 cut(s) | 2154 |
| FblI | GTMKAC | 2 cut(s) | 330, 681 |
| Fnu4HI | GCNGC | 4 cut(s) | 348, 763, 1244, 2394 |
| FokI | GGATG | 8 cut(s) | 329, 473, 649, 683, 1409, 1784, 1979, 2312 |
| FriOI | GRGCYC | 1 cut(s) | 283 |
| Fsp4HI | GCNGC | 4 cut(s) | 348, 763, 1244, 2394 |
| FspBI | CTAG | 5 cut(s) | 290, 1100, 1119, 1464, 1658 |
| GlaI | GCGC | 2 cut(s) | 1583, 1819 |
| GluI | GCNGC | 4 cut(s) | 348, 763, 1244, 2394 |
| GsuI | CTGGAG | 3 cut(s) | 122, 1035, 1268 |
| HaeII | RGCGCY | 1 cut(s) | 1821 |
| HaeIII | GGCC | 4 cut(s) | 406, 1043, 1220, 2340 |
| HapII | CCGG | 3 cut(s) | 344, 2136, 2326 |
| HhaI | GCGC | 2 cut(s) | 1584, 1820 |
| Hin6I | GCGC | 2 cut(s) | 1582, 1818 |
| HinP1I | GCGC | 2 cut(s) | 1582, 1818 |
| HincII | GTYRAC | 1 cut(s) | 331 |
| HindII | GTYRAC | 1 cut(s) | 331 |
| HpaII | CCGG | 3 cut(s) | 344, 2136, 2326 |
| HphI | GGTGA | 6 cut(s) | 523, 935, 1028, 1714, 2063, 2540 |
| Hpy166II | GTNNAC | 2 cut(s) | 331, 682 |
| Hpy8I | GTNNAC | 2 cut(s) | 331, 682 |
| HpyCH4IV | ACGT | 2 cut(s) | 842, 1503 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 347 |
| HpySE526I | ACGT | 2 cut(s) | 842, 1503 |
| HspAI | GCGC | 2 cut(s) | 1582, 1818 |
| Ksp22I | TGATCA | 1 cut(s) | 2154 |
| LmnI | GCTCC | 5 cut(s) | 262, 286, 346, 1054, 2243 |
| Lsp1109I | GCAGC | 3 cut(s) | 359, 1255, 2380 |
| LweI | GCATC | 6 cut(s) | 359, 619, 774, 1044, 2209, 2288 |
| MabI | ACCWGGT | 1 cut(s) | 2353 |
| MaeI | CTAG | 5 cut(s) | 290, 1100, 1119, 1464, 1658 |
| MaeII | ACGT | 2 cut(s) | 842, 1503 |
| MaeIII | GTNAC | 5 cut(s) | 285, 673, 1236, 1702, 2320 |
| MfeI | CAATTG | 2 cut(s) | 251, 2334 |
| MflI | RGATCY | 1 cut(s) | 565 |
| MhlI | GDGCHC | 2 cut(s) | 283, 1407 |
| MlyI | GAGTC | 4 cut(s) | 1663, 2051, 2140, 2295 |
| MmeI | TCCRAC | 1 cut(s) | 2108 |
| Mph1103I | ATGCAT | 3 cut(s) | 24, 223, 634 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1194, 1622, 1847 |
| MspA1I | CMGCKG | 2 cut(s) | 1126, 1246 |
| MspI | CCGG | 3 cut(s) | 344, 2136, 2326 |
| MunI | CAATTG | 2 cut(s) | 251, 2334 |
| Mva1269I | GAATGC | 1 cut(s) | 724 |
| MvaI | CCWGG | 8 cut(s) | 570, 1026, 1053, 1358, 1769, 1782, 1822, 2355 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 347 |
| NciI | CCSGG | 3 cut(s) | 2136, 2137, 2326 |
| NcoI | CCATGG | 1 cut(s) | 2193 |
| NdeI | CATATG | 1 cut(s) | 954 |
| NlaIV | GGNNCC | 3 cut(s) | 258, 1377, 2239 |
| NmuCI | GTSAC | 5 cut(s) | 285, 673, 1236, 1702, 2320 |
| NsiI | ATGCAT | 3 cut(s) | 24, 223, 634 |
| NspI | RCATGY | 2 cut(s) | 850, 2253 |
| PagI | TCATGA | 1 cut(s) | 432 |
| PceI | AGGCCT | 1 cut(s) | 406 |
| PctI | GAATGC | 1 cut(s) | 724 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1194, 1622, 1847 |
| PfeI | GAWTC | 9 cut(s) | 374, 659, 854, 878, 1528, 1763, 1949, 2165, 2399 |
| PflFI | GACNNNGTC | 2 cut(s) | 326, 2355 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1058, 2457 |
| PfoI | TCCNGGA | 1 cut(s) | 1780 |
| PkrI | GCNGC | 4 cut(s) | 349, 764, 1245, 2395 |
| PleI | GAGTC | 4 cut(s) | 1663, 2050, 2139, 2294 |
| PmaCI | CACGTG | 1 cut(s) | 1504 |
| PmlI | CACGTG | 1 cut(s) | 1504 |
| PpsI | GAGTC | 4 cut(s) | 1663, 2050, 2139, 2294 |
| Ppu21I | YACGTR | 1 cut(s) | 1504 |
| PpuMI | RGGWCCY | 1 cut(s) | 1741 |
| PshBI | ATTAAT | 2 cut(s) | 788, 2444 |
| Psp124BI | GAGCTC | 1 cut(s) | 283 |
| Psp5II | RGGWCCY | 1 cut(s) | 1741 |
| Psp6I | CCWGG | 8 cut(s) | 568, 1024, 1051, 1356, 1767, 1780, 1820, 2353 |
| PspCI | CACGTG | 1 cut(s) | 1504 |
| PspGI | CCWGG | 8 cut(s) | 568, 1024, 1051, 1356, 1767, 1780, 1820, 2353 |
| PspN4I | GGNNCC | 3 cut(s) | 258, 1377, 2239 |
| PspPI | GGNCC | 3 cut(s) | 1042, 1741, 2190 |
| PspPPI | RGGWCCY | 1 cut(s) | 1741 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1289, 1321 |
| PstI | CTGCAG | 2 cut(s) | 61, 1677 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1058, 1246 |
| PsuI | RGATCY | 1 cut(s) | 565 |
| PsyI | GACNNNGTC | 2 cut(s) | 326, 2355 |
| PvuII | CAGCTG | 1 cut(s) | 1246 |
| SacI | GAGCTC | 1 cut(s) | 283 |
| SalI | GTCGAC | 1 cut(s) | 329 |
| SatI | GCNGC | 4 cut(s) | 348, 763, 1244, 2394 |
| Sau96I | GGNCC | 3 cut(s) | 1042, 1741, 2190 |
| ScaI | AGTACT | 2 cut(s) | 180, 604 |
| SchI | GAGTC | 4 cut(s) | 1663, 2051, 2140, 2295 |
| SduI | GDGCHC | 2 cut(s) | 283, 1407 |
| SexAI | ACCWGGT | 1 cut(s) | 2353 |
| SfaNI | GCATC | 6 cut(s) | 359, 619, 774, 1044, 2209, 2288 |
| SfcI | CTRYAG | 3 cut(s) | 57, 678, 1673 |
| SinI | GGWCC | 2 cut(s) | 1741, 2190 |
| SmaI | CCCGGG | 1 cut(s) | 2137 |
| SpeI | ACTAGT | 1 cut(s) | 1657 |
| SseBI | AGGCCT | 1 cut(s) | 406 |
| SsiI | CCGC | 2 cut(s) | 763, 1124 |
| SspI | AATATT | 3 cut(s) | 1149, 1178, 2477 |
| SspMI | CTAG | 5 cut(s) | 290, 1100, 1119, 1464, 1658 |
| SstI | GAGCTC | 1 cut(s) | 283 |
| StuI | AGGCCT | 1 cut(s) | 406 |
| StyI | CCWWGG | 2 cut(s) | 1463, 2193 |
| TaiI | ACGT | 2 cut(s) | 845, 1506 |
| TaqI | TCGA | 5 cut(s) | 66, 330, 520, 1327, 1977 |
| TaqII | GACCGA | 1 cut(s) | 1224 |
| TatI | WGTACW | 7 cut(s) | 34, 178, 602, 833, 1474, 1917, 2577 |
| TauI | GCSGC | 1 cut(s) | 765 |
| TfiI | GAWTC | 9 cut(s) | 374, 659, 854, 878, 1528, 1763, 1949, 2165, 2399 |
| TscAI | CASTG | 7 cut(s) | 79, 124, 682, 1432, 1804, 1897, 2556 |
| TseFI | GTSAC | 5 cut(s) | 285, 673, 1236, 1702, 2320 |
| TseI | GCWGC | 3 cut(s) | 347, 1243, 2393 |
| Tsp45I | GTSAC | 5 cut(s) | 285, 673, 1236, 1702, 2320 |
| TspGWI | ACGGA | 2 cut(s) | 273, 1912 |
| TspMI | CCCGGG | 1 cut(s) | 2135 |
| TspRI | CASTG | 7 cut(s) | 79, 124, 682, 1432, 1804, 1897, 2556 |
| Tth111I | GACNNNGTC | 2 cut(s) | 326, 2355 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1058, 2457 |
| VpaK11BI | GGWCC | 2 cut(s) | 1741, 2190 |
| VspI | ATTAAT | 2 cut(s) | 788, 2444 |
| XapI | RAATTY | 4 cut(s) | 1835, 1847, 2012, 2093 |
| XceI | RCATGY | 2 cut(s) | 850, 2253 |
| XmaI | CCCGGG | 1 cut(s) | 2135 |
| XmaJI | CCTAGG | 1 cut(s) | 1463 |
| XmiI | GTMKAC | 2 cut(s) | 330, 681 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1194, 1622, 1847 |
| XspI | CTAG | 5 cut(s) | 290, 1100, 1119, 1464, 1658 |
| ZrmI | AGTACT | 2 cut(s) | 180, 604 |
| Zsp2I | ATGCAT | 3 cut(s) | 24, 223, 634 |