SNF2 domain-containing protein CLASSY
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G16390 AT2G16390 AT2G21450 AT2G21450 AT2G21450 AT2G21455 |
| fragaria_vesca | FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 |
| malus_domestica | MD05G1059900.v1.1 MD10G1068100.v1.1 |
| prunus_persica | Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 |
| pyrus_communis | pycom05g05130 pycom10g05390 |
| rosa_chinensis | RchiOBHm_Chr6g0266061 RchiOBHm_Chr6g0266081 |
| rosa_laevigata | RLG00000014118 RLG00000014121 |
| rosa_multiflora | Rmu_sc0000776.1_g000029 Rmu_sc0000776.1_g000037 |
| rosa_roxburghii | Rroxscaffold_174G00435180 Rroxscaffold_174G00435190 Rroxscaffold_7G00201990 Rroxscaffold_7G00202000 |
| rosa_rugosa | Rorug06G0023000 Rorug06G0023700 |
| rosa_samantha | Rh6AG144300 Rh6AG144400 Rh6BG144700 Rh6BG144900 Rh6CG141400 Rh6CG141600 Rh6DG129100 Rh6DG129200 |
| rosa_wichuraiana | Rw1G008890 Rw6G012470 Rw6G012480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1370, 2046 |
| Acc65I | GGTACC | 1 cut(s) | 1587 |
| AccB1I | GGYRCC | 1 cut(s) | 1587 |
| AccII | CGCG | 2 cut(s) | 1141, 1206 |
| AccIII | TCCGGA | 1 cut(s) | 1464 |
| AciI | CCGC | 4 cut(s) | 1139, 1141, 1525, 1873 |
| AclWI | GGATC | 5 cut(s) | 432, 903, 968, 1883, 2274 |
| AcoI | YGGCCR | 2 cut(s) | 474, 567 |
| AcsI | RAATTY | 5 cut(s) | 1223, 1653, 2126, 2287, 2312 |
| AcuI | CTGAAG | 3 cut(s) | 948, 1040, 2601 |
| AcvI | CACGTG | 1 cut(s) | 2722 |
| AfaI | GTAC | 5 cut(s) | 1117, 1589, 1746, 1890, 2004 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 118, 1349, 2596 |
| AgeI | ACCGGT | 1 cut(s) | 2459 |
| AgsI | TTSAA | 9 cut(s) | 309, 379, 559, 1540, 1730, 2112, 2132, 2140, 2860 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1525 |
| AjiI | CACGTC | 2 cut(s) | 2642, 2677 |
| AjnI | CCWGG | 7 cut(s) | 370, 1315, 1342, 1394, 2024, 2071, 2653 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 230, 262, 1156, 1188 |
| AleI | CACNNNNGTG | 1 cut(s) | 1127 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 675, 707 |
| Alw21I | GWGCWC | 4 cut(s) | 422, 2037, 2676, 2727 |
| Alw26I | GTCTC | 5 cut(s) | 588, 1302, 1533, 2188, 2438 |
| Alw44I | GTGCAC | 1 cut(s) | 2672 |
| AlwI | GGATC | 5 cut(s) | 432, 903, 968, 1883, 2274 |
| Ama87I | CYCGRG | 1 cut(s) | 1857 |
| Aor13HI | TCCGGA | 1 cut(s) | 1464 |
| AoxI | GGCC | 3 cut(s) | 474, 567, 2101 |
| ApaLI | GTGCAC | 1 cut(s) | 2672 |
| ApeKI | GCWGC | 4 cut(s) | 320, 461, 2241, 2693 |
| ApoI | RAATTY | 5 cut(s) | 1223, 1653, 2126, 2287, 2312 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2631, 2663 |
| AsiGI | ACCGGT | 1 cut(s) | 2459 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1460 |
| Asp718I | GGTACC | 1 cut(s) | 1587 |
| AspLEI | GCGC | 1 cut(s) | 1206 |
| AspS9I | GGNCC | 1 cut(s) | 959 |
| AsuC2I | CCSGG | 2 cut(s) | 1858, 1859 |
| AsuHPI | GGTGA | 6 cut(s) | 53, 2063, 2474, 2505, 2694, 2843 |
| AvaI | CYCGRG | 1 cut(s) | 1857 |
| AvaII | GGWCC | 1 cut(s) | 959 |
| BaeGI | GKGCMC | 1 cut(s) | 2676 |
| BanI | GGYRCC | 1 cut(s) | 1587 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1995, 2027 |
| BauI | CACGAG | 1 cut(s) | 2583 |
| BbrPI | CACGTG | 1 cut(s) | 2722 |
| BbsI | GAAGAC | 6 cut(s) | 51, 207, 1667, 1798, 1983, 2813 |
| Bbv12I | GWGCWC | 4 cut(s) | 422, 2037, 2676, 2727 |
| BbvI | GCAGC | 4 cut(s) | 332, 473, 2228, 2680 |
| BccI | CCATC | 6 cut(s) | 120, 185, 584, 985, 2233, 2291 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 661, 695 |
| BciT130I | CCWGG | 7 cut(s) | 372, 1317, 1344, 1396, 2026, 2073, 2655 |
| BciVI | GTATCC | 3 cut(s) | 153, 243, 1438 |
| BclI | TGATCA | 3 cut(s) | 274, 622, 1003 |
| BcnI | CCSGG | 2 cut(s) | 1858, 1859 |
| BcoDI | GTCTC | 5 cut(s) | 588, 1302, 1533, 2188, 2438 |
| BfaI | CTAG | 7 cut(s) | 8, 164, 482, 689, 981, 1410, 1671 |
| BfmI | CTRYAG | 4 cut(s) | 264, 1658, 2680, 2811 |
| BfuI | GTATCC | 3 cut(s) | 153, 243, 1438 |
| BglII | AGATCT | 3 cut(s) | 1819, 2008, 2815 |
| BisI | GCNGC | 5 cut(s) | 321, 462, 1139, 2242, 2694 |
| BlsI | GCNGC | 5 cut(s) | 322, 463, 1140, 2243, 2695 |
| Bme1390I | CCNGG | 9 cut(s) | 372, 1317, 1344, 1396, 1858, 1859, 2026, 2073, 2655 |
| Bme18I | GGWCC | 1 cut(s) | 959 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1525 |
| BmeT110I | CYCGRG | 1 cut(s) | 1857 |
| BmgBI | CACGTC | 2 cut(s) | 2642, 2677 |
| BmgT120I | GGNCC | 1 cut(s) | 959 |
| BmiI | GGNNCC | 6 cut(s) | 96, 219, 252, 1589, 2177, 2539 |
| BmrFI | CCNGG | 9 cut(s) | 372, 1317, 1344, 1396, 1858, 1859, 2026, 2073, 2655 |
| BmrI | ACTGGG | 1 cut(s) | 1209 |
| BmsI | GCATC | 9 cut(s) | 85, 378, 862, 895, 1135, 1396, 1581, 2200, 2509 |
| BmuI | ACTGGG | 1 cut(s) | 1209 |
| BpiI | GAAGAC | 6 cut(s) | 51, 207, 1667, 1798, 1983, 2813 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1160, 1192 |
| BpmI | CTGGAG | 1 cut(s) | 87 |
| BpuEI | CTTGAG | 1 cut(s) | 1949 |
| BpuMI | CCSGG | 2 cut(s) | 1858, 1859 |
| Bsa29I | ATCGAT | 1 cut(s) | 2269 |
| BsaAI | YACGTR | 1 cut(s) | 2722 |
| BsaI | GGTCTC | 1 cut(s) | 1533 |
| BsaWI | WCCGGW | 3 cut(s) | 1464, 2459, 2515 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 125, 155 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 118, 1349, 2596 |
| Bse118I | RCCGGY | 2 cut(s) | 476, 2459 |
| Bse1I | ACTGG | 3 cut(s) | 1093, 1204, 2367 |
| BseAI | TCCGGA | 1 cut(s) | 1464 |
| BseBI | CCWGG | 7 cut(s) | 372, 1317, 1344, 1396, 2026, 2073, 2655 |
| BseCI | ATCGAT | 1 cut(s) | 2269 |
| BseGI | GGATG | 9 cut(s) | 393, 1014, 1030, 1150, 1234, 1572, 2191, 2524, 2719 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 118, 1349, 2596 |
| BseMII | CTCAG | 5 cut(s) | 818, 1158, 1785, 2223, 2763 |
| BseNI | ACTGG | 3 cut(s) | 1093, 1204, 2367 |
| BseRI | GAGGAG | 6 cut(s) | 73, 90, 246, 249, 1941, 2723 |
| BseSI | GKGCMC | 1 cut(s) | 2676 |
| BseXI | GCAGC | 4 cut(s) | 332, 473, 2228, 2680 |
| BseYI | CCCAGC | 1 cut(s) | 713 |
| BsgI | GTGCAG | 2 cut(s) | 480, 2227 |
| Bsh1236I | CGCG | 2 cut(s) | 1141, 1206 |
| BshFI | GGCC | 3 cut(s) | 476, 569, 2103 |
| BshNI | GGYRCC | 1 cut(s) | 1587 |
| BshTI | ACCGGT | 1 cut(s) | 2459 |
| BshVI | ATCGAT | 1 cut(s) | 2269 |
| BsiHKAI | GWGCWC | 4 cut(s) | 422, 2037, 2676, 2727 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1857 |
| BsiSI | CCGG | 5 cut(s) | 477, 1465, 1858, 2460, 2516 |
| BslFI | GGGAC | 1 cut(s) | 1651 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 118, 1349, 2596 |
| BsmAI | GTCTC | 5 cut(s) | 588, 1302, 1533, 2188, 2438 |
| BsmFI | GGGAC | 1 cut(s) | 1651 |
| BsmI | GAATGC | 3 cut(s) | 346, 1326, 2169 |
| BsnI | GGCC | 3 cut(s) | 476, 569, 2103 |
| Bso31I | GGTCTC | 1 cut(s) | 1533 |
| BsoBI | CYCGRG | 1 cut(s) | 1857 |
| Bsp1286I | GDGCHC | 4 cut(s) | 422, 2037, 2676, 2727 |
| Bsp13I | TCCGGA | 1 cut(s) | 1464 |
| Bsp1407I | TGTACA | 1 cut(s) | 2002 |
| Bsp19I | CCATGG | 1 cut(s) | 2262 |
| BspACI | CCGC | 4 cut(s) | 1139, 1141, 1525, 1873 |
| BspANI | GGCC | 3 cut(s) | 476, 569, 2103 |
| BspCNI | CTCAG | 5 cut(s) | 819, 1159, 1784, 2224, 2764 |
| BspDI | ATCGAT | 1 cut(s) | 2269 |
| BspEI | TCCGGA | 1 cut(s) | 1464 |
| BspFNI | CGCG | 2 cut(s) | 1141, 1206 |
| BspHI | TCATGA | 2 cut(s) | 694, 1878 |
| BspLI | GGNNCC | 6 cut(s) | 96, 219, 252, 1589, 2177, 2539 |
| BspMAI | CTGCAG | 1 cut(s) | 1662 |
| BspPI | GGATC | 5 cut(s) | 432, 903, 968, 1883, 2274 |
| BspQI | GCTCTTC | 1 cut(s) | 1562 |
| BspT107I | GGYRCC | 1 cut(s) | 1587 |
| BspTNI | GGTCTC | 1 cut(s) | 1533 |
| BsrFI | RCCGGY | 2 cut(s) | 476, 2459 |
| BsrGI | TGTACA | 1 cut(s) | 2002 |
| BsrI | ACTGG | 3 cut(s) | 1093, 1204, 2367 |
| BssAI | RCCGGY | 2 cut(s) | 476, 2459 |
| BssSI | CACGAG | 1 cut(s) | 2583 |
| BssT1I | CCWWGG | 5 cut(s) | 942, 1512, 1703, 2262, 2736 |
| Bst2BI | CACGAG | 1 cut(s) | 2583 |
| Bst2UI | CCWGG | 7 cut(s) | 372, 1317, 1344, 1396, 2026, 2073, 2655 |
| Bst4CI | ACNGT | 6 cut(s) | 410, 1536, 1596, 1914, 2248, 2812 |
| Bst6I | CTCTTC | 2 cut(s) | 546, 1562 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 173 |
| BstAUI | TGTACA | 1 cut(s) | 2002 |
| BstBAI | YACGTR | 1 cut(s) | 2722 |
| BstC8I | GCNNGC | 4 cut(s) | 535, 1150, 2331, 2631 |
| BstDSI | CCRYGG | 2 cut(s) | 1139, 2262 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1347 |
| BstF5I | GGATG | 9 cut(s) | 393, 1014, 1030, 1150, 1234, 1572, 2191, 2524, 2719 |
| BstFNI | CGCG | 2 cut(s) | 1141, 1206 |
| BstHHI | GCGC | 1 cut(s) | 1206 |
| BstMAI | GTCTC | 5 cut(s) | 588, 1302, 1533, 2188, 2438 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 173, 1138, 1620 |
| BstNI | CCWGG | 7 cut(s) | 372, 1317, 1344, 1396, 2026, 2073, 2655 |
| BstSCI | CCNGG | 9 cut(s) | 370, 1315, 1342, 1394, 1856, 1857, 2024, 2071, 2653 |
| BstSFI | CTRYAG | 4 cut(s) | 264, 1658, 2680, 2811 |
| BstSLI | GKGCMC | 1 cut(s) | 2676 |
| BstUI | CGCG | 2 cut(s) | 1141, 1206 |
| BstV1I | GCAGC | 4 cut(s) | 332, 473, 2228, 2680 |
| BstV2I | GAAGAC | 6 cut(s) | 51, 207, 1667, 1798, 1983, 2813 |
| BstX2I | RGATCY | 4 cut(s) | 895, 1819, 2008, 2815 |
| BstYI | RGATCY | 4 cut(s) | 895, 1819, 2008, 2815 |
| Bsu15I | ATCGAT | 1 cut(s) | 2269 |
| BsuI | GTATCC | 3 cut(s) | 153, 243, 1438 |
| BsuRI | GGCC | 3 cut(s) | 476, 569, 2103 |
| BsuTUI | ATCGAT | 1 cut(s) | 2269 |
| BtgI | CCRYGG | 2 cut(s) | 1139, 2262 |
| BtrI | CACGTC | 2 cut(s) | 2642, 2677 |
| BtsCI | GGATG | 9 cut(s) | 393, 1014, 1030, 1150, 1234, 1572, 2191, 2524, 2719 |
| BtsIMutI | CAGTG | 3 cut(s) | 625, 1754, 2625 |
| Cac8I | GCNNGC | 4 cut(s) | 535, 1150, 2331, 2631 |
| CciI | TCATGA | 2 cut(s) | 694, 1878 |
| CfoI | GCGC | 1 cut(s) | 1206 |
| Cfr10I | RCCGGY | 2 cut(s) | 476, 2459 |
| Cfr13I | GGNCC | 1 cut(s) | 959 |
| Cfr42I | CCGCGG | 1 cut(s) | 1142 |
| Cfr9I | CCCGGG | 1 cut(s) | 1857 |
| ClaI | ATCGAT | 1 cut(s) | 2269 |
| CsiI | ACCWGGT | 1 cut(s) | 2653 |
| Csp6I | GTAC | 5 cut(s) | 1116, 1588, 1745, 1889, 2003 |
| CspAI | ACCGGT | 1 cut(s) | 2459 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1300, 1335 |
| CviQI | GTAC | 5 cut(s) | 1116, 1588, 1745, 1889, 2003 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1525 |
| EaeI | YGGCCR | 2 cut(s) | 474, 567 |
| Eam1104I | CTCTTC | 2 cut(s) | 546, 1562 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1525 |
| EarI | CTCTTC | 2 cut(s) | 546, 1562 |
| Eco130I | CCWWGG | 5 cut(s) | 942, 1512, 1703, 2262, 2736 |
| Eco31I | GGTCTC | 1 cut(s) | 1533 |
| Eco32I | GATATC | 3 cut(s) | 1896, 2207, 2748 |
| Eco47I | GGWCC | 1 cut(s) | 959 |
| Eco57I | CTGAAG | 3 cut(s) | 948, 1040, 2601 |
| Eco72I | CACGTG | 1 cut(s) | 2722 |
| Eco88I | CYCGRG | 1 cut(s) | 1857 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1347 |
| EcoRII | CCWGG | 7 cut(s) | 370, 1315, 1342, 1394, 2024, 2071, 2653 |
| EcoRV | GATATC | 3 cut(s) | 1896, 2207, 2748 |
| EcoT14I | CCWWGG | 5 cut(s) | 942, 1512, 1703, 2262, 2736 |
| EcoT22I | ATGCAT | 3 cut(s) | 393, 910, 2193 |
| ErhI | CCWWGG | 5 cut(s) | 942, 1512, 1703, 2262, 2736 |
| FaqI | GGGAC | 1 cut(s) | 1651 |
| FauI | CCCGC | 1 cut(s) | 1134 |
| FauNDI | CATATG | 1 cut(s) | 1254 |
| FbaI | TGATCA | 3 cut(s) | 274, 622, 1003 |
| Fnu4HI | GCNGC | 5 cut(s) | 321, 462, 1139, 2242, 2694 |
| FokI | GGATG | 9 cut(s) | 400, 1001, 1037, 1157, 1221, 1559, 2178, 2531, 2726 |
| Fsp4HI | GCNGC | 5 cut(s) | 321, 462, 1139, 2242, 2694 |
| FspBI | CTAG | 7 cut(s) | 8, 164, 482, 689, 981, 1410, 1671 |
| GlaI | GCGC | 1 cut(s) | 1205 |
| GluI | GCNGC | 5 cut(s) | 321, 462, 1139, 2242, 2694 |
| GsaI | CCCAGC | 1 cut(s) | 717 |
| GsuI | CTGGAG | 1 cut(s) | 87 |
| HaeIII | GGCC | 3 cut(s) | 476, 569, 2103 |
| HapII | CCGG | 5 cut(s) | 477, 1465, 1858, 2460, 2516 |
| HhaI | GCGC | 1 cut(s) | 1206 |
| Hin6I | GCGC | 1 cut(s) | 1204 |
| HinP1I | GCGC | 1 cut(s) | 1204 |
| HincII | GTYRAC | 1 cut(s) | 2457 |
| HindII | GTYRAC | 1 cut(s) | 2457 |
| HindIII | AAGCTT | 1 cut(s) | 1190 |
| HinfI | GANTC | 9 cut(s) | 1185, 1931, 2271, 2342, 2431, 2562, 2623, 2699, 2825 |
| HpaI | GTTAAC | 1 cut(s) | 2457 |
| HpaII | CCGG | 5 cut(s) | 477, 1465, 1858, 2460, 2516 |
| HphI | GGTGA | 6 cut(s) | 53, 2063, 2474, 2505, 2694, 2843 |
| Hpy166II | GTNNAC | 6 cut(s) | 1118, 2088, 2457, 2674, 2769, 2783 |
| Hpy8I | GTNNAC | 6 cut(s) | 1118, 2088, 2457, 2674, 2769, 2783 |
| HpyCH4III | ACNGT | 6 cut(s) | 410, 1536, 1596, 1914, 2248, 2812 |
| HpyCH4IV | ACGT | 3 cut(s) | 2641, 2676, 2721 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 173, 1138, 1620 |
| HpySE526I | ACGT | 3 cut(s) | 2641, 2676, 2721 |
| HspAI | GCGC | 1 cut(s) | 1204 |
| Kpn2I | TCCGGA | 1 cut(s) | 1464 |
| KpnI | GGTACC | 1 cut(s) | 1591 |
| Ksp22I | TGATCA | 3 cut(s) | 274, 622, 1003 |
| KspAI | GTTAAC | 1 cut(s) | 2457 |
| KspI | CCGCGG | 1 cut(s) | 1142 |
| LguI | GCTCTTC | 1 cut(s) | 1562 |
| LmnI | GCTCC | 6 cut(s) | 217, 250, 670, 2040, 2175, 2576 |
| Lsp1109I | GCAGC | 4 cut(s) | 332, 473, 2228, 2680 |
| LweI | GCATC | 9 cut(s) | 85, 378, 862, 895, 1135, 1396, 1581, 2200, 2509 |
| MabI | ACCWGGT | 1 cut(s) | 2653 |
| MaeI | CTAG | 7 cut(s) | 8, 164, 482, 689, 981, 1410, 1671 |
| MaeII | ACGT | 3 cut(s) | 2641, 2676, 2721 |
| MaeIII | GTNAC | 5 cut(s) | 497, 1385, 1694, 2051, 2620 |
| MfeI | CAATTG | 1 cut(s) | 2634 |
| MflI | RGATCY | 4 cut(s) | 895, 1819, 2008, 2815 |
| MhlI | GDGCHC | 4 cut(s) | 422, 2037, 2676, 2727 |
| MlyI | GAGTC | 4 cut(s) | 2440, 2617, 2693, 2819 |
| MmeI | TCCRAC | 3 cut(s) | 339, 661, 2408 |
| Mph1103I | ATGCAT | 3 cut(s) | 393, 910, 2193 |
| MroI | TCCGGA | 1 cut(s) | 1464 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1460 |
| MslI | CAYNNNNRTG | 6 cut(s) | 128, 290, 504, 699, 934, 1127 |
| MspA1I | CMGCKG | 2 cut(s) | 968, 1141 |
| MspI | CCGG | 5 cut(s) | 477, 1465, 1858, 2460, 2516 |
| MspR9I | CCNGG | 9 cut(s) | 372, 1317, 1344, 1396, 1858, 1859, 2026, 2073, 2655 |
| MunI | CAATTG | 1 cut(s) | 2634 |
| Mva1269I | GAATGC | 3 cut(s) | 346, 1326, 2169 |
| MvaI | CCWGG | 7 cut(s) | 372, 1317, 1344, 1396, 2026, 2073, 2655 |
| MvnI | CGCG | 2 cut(s) | 1141, 1206 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 173, 1138, 1620 |
| NciI | CCSGG | 2 cut(s) | 1858, 1859 |
| NcoI | CCATGG | 1 cut(s) | 2262 |
| NdeI | CATATG | 1 cut(s) | 1254 |
| NlaIV | GGNNCC | 6 cut(s) | 96, 219, 252, 1589, 2177, 2539 |
| NmeAIII | GCCGAG | 3 cut(s) | 1673, 2079, 2605 |
| NmuCI | GTSAC | 4 cut(s) | 497, 1694, 2051, 2620 |
| NsiI | ATGCAT | 3 cut(s) | 393, 910, 2193 |
| OliI | CACNNNNGTG | 1 cut(s) | 1127 |
| PagI | TCATGA | 2 cut(s) | 694, 1878 |
| PciSI | GCTCTTC | 1 cut(s) | 1562 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2647 |
| PctI | GAATGC | 3 cut(s) | 346, 1326, 2169 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1460 |
| PfeI | GAWTC | 5 cut(s) | 1185, 1931, 2271, 2342, 2562 |
| PflFI | GACNNNGTC | 1 cut(s) | 2655 |
| PinAI | ACCGGT | 1 cut(s) | 2459 |
| PkrI | GCNGC | 5 cut(s) | 322, 463, 1140, 2243, 2695 |
| PleI | GAGTC | 4 cut(s) | 2439, 2617, 2693, 2819 |
| PmaCI | CACGTG | 1 cut(s) | 2722 |
| PmlI | CACGTG | 1 cut(s) | 2722 |
| PpsI | GAGTC | 4 cut(s) | 2439, 2617, 2693, 2819 |
| Ppu21I | YACGTR | 1 cut(s) | 2722 |
| PsiI | TTATAA | 2 cut(s) | 1370, 2046 |
| Psp6I | CCWGG | 7 cut(s) | 370, 1315, 1342, 1394, 2024, 2071, 2653 |
| PspCI | CACGTG | 1 cut(s) | 2722 |
| PspFI | CCCAGC | 1 cut(s) | 713 |
| PspGI | CCWGG | 7 cut(s) | 370, 1315, 1342, 1394, 2024, 2071, 2653 |
| PspN4I | GGNNCC | 6 cut(s) | 96, 219, 252, 1589, 2177, 2539 |
| PspPI | GGNCC | 1 cut(s) | 959 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1580, 1612 |
| PstI | CTGCAG | 1 cut(s) | 1662 |
| PsuI | RGATCY | 4 cut(s) | 895, 1819, 2008, 2815 |
| PsyI | GACNNNGTC | 1 cut(s) | 2655 |
| PvuII | CAGCTG | 1 cut(s) | 968 |
| RsaI | GTAC | 5 cut(s) | 1117, 1589, 1746, 1890, 2004 |
| RsaNI | GTAC | 5 cut(s) | 1116, 1588, 1745, 1889, 2003 |
| RseI | CAYNNNNRTG | 6 cut(s) | 128, 290, 504, 699, 934, 1127 |
| SacII | CCGCGG | 1 cut(s) | 1142 |
| SapI | GCTCTTC | 1 cut(s) | 1562 |
| SatI | GCNGC | 5 cut(s) | 321, 462, 1139, 2242, 2694 |
| Sau96I | GGNCC | 1 cut(s) | 959 |
| SchI | GAGTC | 4 cut(s) | 2440, 2617, 2693, 2819 |
| ScrFI | CCNGG | 9 cut(s) | 372, 1317, 1344, 1396, 1858, 1859, 2026, 2073, 2655 |
| SduI | GDGCHC | 4 cut(s) | 422, 2037, 2676, 2727 |
| SexAI | ACCWGGT | 1 cut(s) | 2653 |
| SfaNI | GCATC | 9 cut(s) | 85, 378, 862, 895, 1135, 1396, 1581, 2200, 2509 |
| SfcI | CTRYAG | 4 cut(s) | 264, 1658, 2680, 2811 |
| Sfr303I | CCGCGG | 1 cut(s) | 1142 |
| SgrBI | CCGCGG | 1 cut(s) | 1142 |
| SinI | GGWCC | 1 cut(s) | 959 |
| SmaI | CCCGGG | 1 cut(s) | 1859 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 128, 290, 504, 699, 934, 1127 |
| SmlI | CTYRAG | 1 cut(s) | 1964 |
| SmoI | CTYRAG | 1 cut(s) | 1964 |
| SsiI | CCGC | 4 cut(s) | 1139, 1141, 1525, 1873 |
| SspI | AATATT | 1 cut(s) | 316 |
| SspMI | CTAG | 7 cut(s) | 8, 164, 482, 689, 981, 1410, 1671 |
| StyD4I | CCNGG | 9 cut(s) | 370, 1315, 1342, 1394, 1856, 1857, 2024, 2071, 2653 |
| StyI | CCWWGG | 5 cut(s) | 942, 1512, 1703, 2262, 2736 |
| TaaI | ACNGT | 6 cut(s) | 410, 1536, 1596, 1914, 2248, 2812 |
| TaiI | ACGT | 3 cut(s) | 2644, 2679, 2724 |
| TaqI | TCGA | 4 cut(s) | 68, 2269, 2650, 2763 |
| TaqII | GACCGA | 1 cut(s) | 947 |
| TatI | WGTACW | 3 cut(s) | 1115, 1744, 2002 |
| TauI | GCSGC | 1 cut(s) | 1141 |
| TfiI | GAWTC | 5 cut(s) | 1185, 1931, 2271, 2342, 2562 |
| TscAI | CASTG | 3 cut(s) | 625, 1761, 2625 |
| TseFI | GTSAC | 4 cut(s) | 497, 1694, 2051, 2620 |
| TseI | GCWGC | 4 cut(s) | 320, 461, 2241, 2693 |
| Tsp45I | GTSAC | 4 cut(s) | 497, 1694, 2051, 2620 |
| TspGWI | ACGGA | 2 cut(s) | 437, 1906 |
| TspMI | CCCGGG | 1 cut(s) | 1857 |
| TspRI | CASTG | 3 cut(s) | 625, 1761, 2625 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2655 |
| VneI | GTGCAC | 1 cut(s) | 2672 |
| VpaK11BI | GGWCC | 1 cut(s) | 959 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1347 |
| XapI | RAATTY | 5 cut(s) | 1223, 1653, 2126, 2287, 2312 |
| XbaI | TCTAGA | 1 cut(s) | 481 |
| XmaI | CCCGGG | 1 cut(s) | 1857 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1460 |
| XspI | CTAG | 7 cut(s) | 8, 164, 482, 689, 981, 1410, 1671 |
| Zsp2I | ATGCAT | 3 cut(s) | 393, 910, 2193 |