Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000776.1

Orthogroup ID

OG0001815

Physical Location & Seq

Genomic Coordinates Forward (+)

125692 .. 130984

Gene Structure 5293 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000776.1_g000029.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2700 bp

atggagccggcagtggatatacggcccggtaaagacgccacttacgacggtttgtattccaaggggcataagaggttgaagttgtcttctgatagaaatgtatgtgatggaatggtcttgtctgcaagtatgcatagtgaaattgtacagaagccatgttctacttctgcagttgtcgattacactgatccattagctatacaaaacttgctggagggattagatgacagtggtaaatatggaagtgttgcaaaggacatgaagacatttactgctcagatacatcaagtactgaaccctttgcttgcaaaataccccacactatcaaatgcatactttaaagaggaaagaaggcatagtcaattggctcctaaattagcaattcaacgagctccgtcactagcacaaaataatgtcattgatttggatgatgactgtgtcgacagtaatgctccggcagcatcgttgcctattgtaatcattgattcagatgaggaacagaatgaagatcagaggccttcttactctttccaggaggttttcatgacacaaccatcttattctttcaaggatgtaattctgccacagccatctgaacaagttttcaggaagcacttgggggtgagggatcgagtagaagaagcaagtctgtctgctggaactgaaacaaataaagatccaggtgtttatgtgggtgtagaagatgaagaaagtactgaagatgatgatggtttaggagatgcatggatggaaatgtcaatggcgttagaatcttcaaaggatgtcactgtagaccctttatctgaagaaagaacgagtgaaggcgactgtgagcattcttttgtcttaaaagatgatcttggatatgtttgccgcatctgtggggttattgacagattaattgatacaatatttgagtttcagtataacaaggtcaaaaggagtacaagaacgtacatgcctgattctcgtaatgggaaagacagagattcaactgagacgggtggagttaaactttctgaagatggtttgataataactgaaatatctgctcacccaagacatatgaagcaaatgaaacctcatcaagtggagggtttcaattttcttgttagcaacttagttggtgataatcctggtggttgcatcttggcccatgctccagggtctggtaaaacatttatgataatcagtttcatgcaaagtttcctagccaagtatccaaatgctagaccgctggttgttcttcctaagggaatattggatacatggaaaaaggagtttaaatattggcaagtagaagatattcctttatttgacttctatgaggccaaagcagacaatcggtcacagcagctggaggttttgaagaagtgggtagatcagaagagtatcctgttcttagggtacaaacagttctcctctattgtttgtgatcgagaaactaaccagatatcaacttcgtgccaggagatattgctaaaggcaccttcaattcttattatggatgaagggcacacccctcggaatgacaacactgatgtattccaatccattgcaaaattgcagacacctaggaaagttgtactttctggaactatttatcaaaatcacgtgaaggaagtattcaacattctgaatcttgttcgtcctaagtttttaagatcagaaacttcccgacccatcatcaagcgcataatgagtagggtagatataaaaggtgcaaggaagcagttcaaagctggtgctgataatgttttctatgaactggtggaggagactctgcagagggatacggatttcagaaggaaagtgactgtcatacatgacttgcgtgagatgaccagcaaggtccttcattactacaaaggagattccctggatgagcttcctggacttgttgatttcactgtggtactcaatctaagcgcctggcagaagcagaaattccagaaggaattcaagaagtttgcaaggaagttcaagcaaagttcagttggcagtgctgtttatctgcacccaaaattgtactccgtctctaaggactggaaaccctctgattcaaatgaaaagatggatgagttggtcgagacaatagacttgaatgaaggaattaaggcaaaattctttttgaatatgcttaggttatgtgagtcgtctggtgagaaacttttggttttcagtcagtacctcccacctttgaaatttttagagagattaacagtcaaaacgaagggttggagtcccgggagagaattgtttgtgatcacaggggaatcaaagtctgagaatagggagtggtccatggagagatttaacaattcccctgatgctaaggttttctttggctccatcaaagcatgtggagagggtatatctttagtaggggcatcacgagtcataattttggatgtccatcttaatccctctgtgacccggcaagcaattggccgtgcatttagacctggtcaaaagaagaaagtatttgtatatagattggtagctgctgattcccccgaagaggaagatcataggacttgcttccaaaaagaattaattgccaaaatgtggtttgaatggaacgaatattgtggttatcgggattttgaagtggatactgttgatgtcaaagattgtggtgatctttttcttgaaagtccagtgttgggggaagatgtgaaggttctgtacagaaggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000018 GO:0000166 GO:0000280 GO:0003674 GO:0003676 GO:0003677 GO:0003712 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006139 GO:0006259 GO:0006310 GO:0006311 GO:0006325 GO:0006338 GO:0006342 GO:0006355 GO:0006357 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0008094 GO:0008144 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0015616 GO:0016043 GO:0016458 GO:0016462 GO:0016604 GO:0016607 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019219 GO:0019222 GO:0019899 GO:0019900 GO:0019901 GO:0022402 GO:0022414 GO:0030491 GO:0030554 GO:0030702 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031974 GO:0031981 GO:0032553 GO:0032555 GO:0032559 GO:0033170 GO:0034641 GO:0035639 GO:0035822 GO:0035825 GO:0035861 GO:0036094 GO:0040029 GO:0042623 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0048285 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051321 GO:0060255 GO:0061806 GO:0061982 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090734 GO:0097159 GO:0097367 GO:0140013 GO:0140097 GO:0140110 GO:1901265 GO:1901360 GO:1901363 GO:1902679 GO:1902680 GO:1903046 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03440 map03440

Pfam Domains

Protein Families

Helicase_C SNF2_N

Protein Analysis

899

Amino Acids

102.17

Weight (kDa)

5.81

Isoelectric Point (pI)

38.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001815)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16390 AT2G16390 AT2G21450 AT2G21450 AT2G21450 AT2G21455
fragaria_vesca	FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760
malus_domestica	MD05G1059900.v1.1 MD10G1068100.v1.1
prunus_persica	Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1
pyrus_communis	pycom05g05130 pycom10g05390
rosa_chinensis	RchiOBHm_Chr6g0266061 RchiOBHm_Chr6g0266081
rosa_laevigata	RLG00000014118 RLG00000014121
rosa_multiflora	Rmu_sc0000776.1_g000029 Rmu_sc0000776.1_g000037
rosa_roxburghii	Rroxscaffold_174G00435180 Rroxscaffold_174G00435190 Rroxscaffold_7G00201990 Rroxscaffold_7G00202000
rosa_rugosa	Rorug06G0023000 Rorug06G0023700
rosa_samantha	Rh6AG144300 Rh6AG144400 Rh6BG144700 Rh6BG144900 Rh6CG141400 Rh6CG141600 Rh6DG129100 Rh6DG129200
rosa_wichuraiana	Rw1G008890 Rw6G012470 Rw6G012480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1486
AccB7I	CCANNNNNTGG	2 cut(s)	1169, 2568
AccI	GTMKAC	2 cut(s)	441, 792
AciI	CCGC	2 cut(s)	874, 1235
AclWI	GGATC	3 cut(s)	182, 636, 671
AcoI	YGGCCR	1 cut(s)	2449
AcsI	RAATTY	4 cut(s)	1946, 1958, 2123, 2204
AcuI	CTGAAG	3 cut(s)	738, 825, 1041
AcvI	CACGTG	1 cut(s)	1615
AcyI	GRCGYC	1 cut(s)	36
AfiI	CCNNNNNNNGG	4 cut(s)	1169, 2521, 2568, 2666
AhdI	GACNNNNNGTC	1 cut(s)	1345
AjnI	CCWGG	9 cut(s)	531, 679, 1135, 1162, 1467, 1878, 1891, 1931, 2464
AluBI	AGCT	6 cut(s)	197, 392, 1357, 1742, 1888, 2504
AluI	AGCT	6 cut(s)	197, 392, 1357, 1742, 1888, 2504
Alw21I	GWGCWC	1 cut(s)	394
Alw26I	GTCTC	4 cut(s)	992, 1772, 2041, 2084
AlwI	GGATC	3 cut(s)	182, 636, 671
AlwNI	CAGNNNCTG	2 cut(s)	1169, 1357
Ama87I	CYCGRG	1 cut(s)	2246
AoxI	GGCC	5 cut(s)	23, 515, 1152, 1329, 2449
ApeKI	GCWGC	3 cut(s)	458, 1354, 2504
ApoI	RAATTY	4 cut(s)	1946, 1958, 2123, 2204
AseI	ATTAAT	2 cut(s)	899, 2555
Asp700I	GAANNNNTTC	3 cut(s)	1305, 1733, 1958
AspA2I	CCTAGG	1 cut(s)	1574
AspLEI	GCGC	2 cut(s)	1695, 1931
AspS9I	GGNCC	4 cut(s)	24, 1153, 1852, 2301
AsuC2I	CCSGG	4 cut(s)	27, 2247, 2248, 2437
AsuHPI	GGTGA	5 cut(s)	634, 1046, 1139, 2174, 2651
AvaI	CYCGRG	1 cut(s)	2246
AvaII	GGWCC	2 cut(s)	1852, 2301
AvrII	CCTAGG	1 cut(s)	1574
AxyI	CCTNAGG	1 cut(s)	1251
BaeGI	GKGCMC	1 cut(s)	1518
BanI	GGYRCC	1 cut(s)	1486
BanII	GRGCYC	1 cut(s)	394
BarI	GAAGNNNNNNTAC	1 cut(s)	2672
BauI	CACGAG	1 cut(s)	2394
BbrPI	CACGTG	1 cut(s)	1615
BbsI	GAAGAC	2 cut(s)	78, 269
Bbv12I	GWGCWC	1 cut(s)	394
BbvI	GCAGC	3 cut(s)	470, 1366, 2491
BceAI	ACGGC	2 cut(s)	38, 2436
BcgI	CGANNNNNNTGC	4 cut(s)	431, 465, 1505, 1539
BciT130I	CCWGG	9 cut(s)	533, 681, 1137, 1164, 1469, 1880, 1893, 1933, 2466
BciVI	GTATCC	5 cut(s)	1230, 1258, 1403, 1786, 2608
BclI	TGATCA	1 cut(s)	2265
BcnI	CCSGG	4 cut(s)	27, 2247, 2248, 2437
BcoDI	GTCTC	4 cut(s)	992, 1772, 2041, 2084
BfaI	CTAG	4 cut(s)	401, 1211, 1230, 1575
BfmI	CTRYAG	3 cut(s)	168, 789, 1784
BfoI	RGCGCY	1 cut(s)	1932
BfuI	GTATCC	5 cut(s)	1230, 1258, 1403, 1786, 2608
BisI	GCNGC	4 cut(s)	459, 874, 1355, 2505
BlnI	CCTAGG	1 cut(s)	1574
BlsI	GCNGC	4 cut(s)	460, 875, 1356, 2506
BmcAI	AGTACT	2 cut(s)	291, 715
Bme18I	GGWCC	2 cut(s)	1852, 2301
BmeRI	GACNNNNNGTC	1 cut(s)	1345
BmeT110I	CYCGRG	1 cut(s)	2246
BmgT120I	GGNCC	4 cut(s)	24, 1153, 1852, 2301
BmiI	GGNNCC	4 cut(s)	6, 369, 1488, 2350
BmsI	GCATC	6 cut(s)	470, 730, 885, 1155, 2320, 2399
BpiI	GAAGAC	2 cut(s)	78, 269
BpmI	CTGGAG	3 cut(s)	233, 1146, 1379
Bpu10I	CCTNAGC	2 cut(s)	2141, 2334
BpuMI	CCSGG	4 cut(s)	27, 2247, 2248, 2437
BsaAI	YACGTR	1 cut(s)	1615
BsaBI	GATNNNNATC	1 cut(s)	2415
BsaHI	GRCGYC	1 cut(s)	36
BsaJI	CCNNGG	7 cut(s)	60, 1163, 1523, 1574, 1878, 2246, 2304
Bsc4I	CCNNNNNNNGG	4 cut(s)	1169, 2521, 2568, 2666
Bse118I	RCCGGY	1 cut(s)	7
Bse1I	ACTGG	3 cut(s)	1773, 2051, 2660
Bse21I	CCTNAGG	1 cut(s)	1251
Bse3DI	GCAATG	1 cut(s)	1554
Bse8I	GATNNNNATC	1 cut(s)	2415
BseBI	CCWGG	9 cut(s)	533, 681, 1137, 1164, 1469, 1880, 1893, 1933, 2466
BseDI	CCNNGG	7 cut(s)	60, 1163, 1523, 1574, 1878, 2246, 2304
BseGI	GGATG	8 cut(s)	433, 577, 753, 787, 1513, 1888, 2083, 2416
BseJI	GATNNNNATC	1 cut(s)	2415
BseLI	CCNNNNNNNGG	4 cut(s)	1169, 2521, 2568, 2666
BseMI	GCAATG	1 cut(s)	1554
BseMII	CTCAG	3 cut(s)	290, 987, 2277
BseNI	ACTGG	3 cut(s)	1773, 2051, 2660
BseRI	GAGGAG	2 cut(s)	1411, 1790
BseSI	GKGCMC	1 cut(s)	1518
BseXI	GCAGC	3 cut(s)	470, 1366, 2491
BsgI	GTGCAG	1 cut(s)	2000
BshFI	GGCC	5 cut(s)	25, 517, 1154, 1331, 2451
BshNI	GGYRCC	1 cut(s)	1486
BsiHKAI	GWGCWC	1 cut(s)	394
BsiHKCI	CYCGRG	1 cut(s)	2246
BsiSI	CCGG	5 cut(s)	8, 27, 455, 2247, 2437
BslFI	GGGAC	1 cut(s)	2229
BslI	CCNNNNNNNGG	4 cut(s)	1169, 2521, 2568, 2666
BsmAI	GTCTC	4 cut(s)	992, 1772, 2041, 2084
BsmBI	CGTCTC	2 cut(s)	992, 2041
BsmFI	GGGAC	1 cut(s)	2229
BsmI	GAATGC	1 cut(s)	835
BsnI	GGCC	5 cut(s)	25, 517, 1154, 1331, 2451
BsoBI	CYCGRG	1 cut(s)	2246
Bsp1286I	GDGCHC	2 cut(s)	394, 1518
Bsp1407I	TGTACA	2 cut(s)	145, 2688
Bsp19I	CCATGG	1 cut(s)	2304
BspACI	CCGC	2 cut(s)	874, 1235
BspANI	GGCC	5 cut(s)	25, 517, 1154, 1331, 2451
BspCNI	CTCAG	3 cut(s)	289, 988, 2278
BspHI	TCATGA	1 cut(s)	543
BspLI	GGNNCC	4 cut(s)	6, 369, 1488, 2350
BspMAI	CTGCAG	2 cut(s)	172, 1788
BspPI	GGATC	3 cut(s)	182, 636, 671
BspT107I	GGYRCC	1 cut(s)	1486
BsrDI	GCAATG	1 cut(s)	1554
BsrFI	RCCGGY	1 cut(s)	7
BsrGI	TGTACA	2 cut(s)	145, 2688
BsrI	ACTGG	3 cut(s)	1773, 2051, 2660
BssAI	RCCGGY	1 cut(s)	7
BssECI	CCNNGG	7 cut(s)	60, 1163, 1523, 1574, 1878, 2246, 2304
BssNI	GRCGYC	1 cut(s)	36
BssSI	CACGAG	1 cut(s)	2394
BssT1I	CCWWGG	3 cut(s)	60, 1574, 2304
Bst2BI	CACGAG	1 cut(s)	2394
Bst2UI	CCWGG	9 cut(s)	533, 681, 1137, 1164, 1469, 1880, 1893, 1933, 2466
Bst6I	CTCTTC	2 cut(s)	1382, 2514
BstACI	GRCGYC	1 cut(s)	36
BstAUI	TGTACA	2 cut(s)	145, 2688
BstBAI	YACGTR	1 cut(s)	1615
BstC8I	GCNNGC	3 cut(s)	9, 306, 2442
BstDSI	CCRYGG	1 cut(s)	2304
BstF5I	GGATG	8 cut(s)	433, 577, 753, 787, 1513, 1888, 2083, 2416
BstH2I	RGCGCY	1 cut(s)	1932
BstHHI	GCGC	2 cut(s)	1695, 1931
BstMAI	GTCTC	4 cut(s)	992, 1772, 2041, 2084
BstMWI	GCNNNNNNNGC	1 cut(s)	458
BstNI	CCWGG	9 cut(s)	533, 681, 1137, 1164, 1469, 1880, 1893, 1933, 2466
BstNSI	RCATGY	2 cut(s)	961, 2364
BstSFI	CTRYAG	3 cut(s)	168, 789, 1784
BstSLI	GKGCMC	1 cut(s)	1518
BstV1I	GCAGC	3 cut(s)	470, 1366, 2491
BstV2I	GAAGAC	2 cut(s)	78, 269
BstX2I	RGATCY	1 cut(s)	676
BstYI	RGATCY	1 cut(s)	676
Bsu36I	CCTNAGG	1 cut(s)	1251
BsuI	GTATCC	5 cut(s)	1230, 1258, 1403, 1786, 2608
BsuRI	GGCC	5 cut(s)	25, 517, 1154, 1331, 2451
BtgI	CCRYGG	1 cut(s)	2304
BtsCI	GGATG	8 cut(s)	433, 577, 753, 787, 1513, 1888, 2083, 2416
BtsI	GCAGTG	2 cut(s)	18, 2008
BtsIMutI	CAGTG	8 cut(s)	18, 183, 235, 786, 1536, 1908, 2008, 2667
Cac8I	GCNNGC	3 cut(s)	9, 306, 2442
CaiI	CAGNNNCTG	2 cut(s)	1169, 1357
CciI	TCATGA	1 cut(s)	543
CfoI	GCGC	2 cut(s)	1695, 1931
Cfr10I	RCCGGY	1 cut(s)	7
Cfr13I	GGNCC	4 cut(s)	24, 1153, 1852, 2301
Cfr9I	CCCGGG	1 cut(s)	2246
CseI	GACGC	1 cut(s)	44
CsiI	ACCWGGT	1 cut(s)	2464
CspCI	CAANNNNNGTGG	4 cut(s)	2344, 2379, 2617, 2652
DraI	TTTAAA	2 cut(s)	340, 1285
DriI	GACNNNNNGTC	1 cut(s)	1345
EaeI	YGGCCR	1 cut(s)	2449
Eam1104I	CTCTTC	2 cut(s)	1382, 2514
Eam1105I	GACNNNNNGTC	1 cut(s)	1345
EarI	CTCTTC	2 cut(s)	1382, 2514
Ecl136II	GAGCTC	1 cut(s)	392
Eco130I	CCWWGG	3 cut(s)	60, 1574, 2304
Eco147I	AGGCCT	1 cut(s)	517
Eco24I	GRGCYC	1 cut(s)	394
Eco32I	GATATC	1 cut(s)	1455
Eco47I	GGWCC	2 cut(s)	1852, 2301
Eco53kI	GAGCTC	1 cut(s)	392
Eco57I	CTGAAG	3 cut(s)	738, 825, 1041
Eco72I	CACGTG	1 cut(s)	1615
Eco81I	CCTNAGG	1 cut(s)	1251
Eco88I	CYCGRG	1 cut(s)	2246
EcoICRI	GAGCTC	1 cut(s)	392
EcoO109I	RGGNCCY	1 cut(s)	1852
EcoRI	GAATTC	1 cut(s)	1958
EcoRII	CCWGG	9 cut(s)	531, 679, 1135, 1162, 1467, 1878, 1891, 1931, 2464
EcoRV	GATATC	1 cut(s)	1455
EcoT14I	CCWWGG	3 cut(s)	60, 1574, 2304
EcoT22I	ATGCAT	3 cut(s)	135, 334, 745
EcoT38I	GRGCYC	1 cut(s)	394
ErhI	CCWWGG	3 cut(s)	60, 1574, 2304
Esp3I	CGTCTC	2 cut(s)	992, 2041
FalI	AAGNNNNNCTT	6 cut(s)	843, 875, 1572, 1604, 2327, 2359
FaqI	GGGAC	1 cut(s)	2229
FauNDI	CATATG	1 cut(s)	1065
FbaI	TGATCA	1 cut(s)	2265
FblI	GTMKAC	2 cut(s)	441, 792
Fnu4HI	GCNGC	4 cut(s)	459, 874, 1355, 2505
FokI	GGATG	8 cut(s)	440, 584, 760, 794, 1520, 1895, 2090, 2423
FriOI	GRGCYC	1 cut(s)	394
Fsp4HI	GCNGC	4 cut(s)	459, 874, 1355, 2505
FspBI	CTAG	4 cut(s)	401, 1211, 1230, 1575
GlaI	GCGC	2 cut(s)	1694, 1930
GluI	GCNGC	4 cut(s)	459, 874, 1355, 2505
GsuI	CTGGAG	3 cut(s)	233, 1146, 1379
HaeII	RGCGCY	1 cut(s)	1932
HaeIII	GGCC	5 cut(s)	25, 517, 1154, 1331, 2451
HapII	CCGG	5 cut(s)	8, 27, 455, 2247, 2437
HgaI	GACGC	1 cut(s)	44
HhaI	GCGC	2 cut(s)	1695, 1931
Hin1I	GRCGYC	1 cut(s)	36
Hin6I	GCGC	2 cut(s)	1693, 1929
HinP1I	GCGC	2 cut(s)	1693, 1929
HincII	GTYRAC	1 cut(s)	442
HindII	GTYRAC	1 cut(s)	442
HpaII	CCGG	5 cut(s)	8, 27, 455, 2247, 2437
HphI	GGTGA	5 cut(s)	634, 1046, 1139, 2174, 2651
Hpy166II	GTNNAC	2 cut(s)	442, 793
Hpy8I	GTNNAC	2 cut(s)	442, 793
Hpy99I	CGWCG	1 cut(s)	50
HpyCH4IV	ACGT	2 cut(s)	953, 1614
HpyF10VI	GCNNNNNNNGC	1 cut(s)	458
HpySE526I	ACGT	2 cut(s)	953, 1614
Hsp92I	GRCGYC	1 cut(s)	36
HspAI	GCGC	2 cut(s)	1693, 1929
KroI	GCCGGC	1 cut(s)	7
KroNI	GCCGGC	1 cut(s)	9
Ksp22I	TGATCA	1 cut(s)	2265
LmnI	GCTCC	6 cut(s)	4, 373, 397, 457, 1165, 2354
Lsp1109I	GCAGC	3 cut(s)	470, 1366, 2491
LweI	GCATC	6 cut(s)	470, 730, 885, 1155, 2320, 2399
MabI	ACCWGGT	1 cut(s)	2464
MaeI	CTAG	4 cut(s)	401, 1211, 1230, 1575
MaeII	ACGT	2 cut(s)	953, 1614
MaeIII	GTNAC	5 cut(s)	396, 784, 1347, 1813, 2431
MfeI	CAATTG	2 cut(s)	362, 2445
MflI	RGATCY	1 cut(s)	676
MhlI	GDGCHC	2 cut(s)	394, 1518
MlyI	GAGTC	4 cut(s)	1774, 2162, 2251, 2406
MmeI	TCCRAC	1 cut(s)	2219
Mph1103I	ATGCAT	3 cut(s)	135, 334, 745
MroNI	GCCGGC	1 cut(s)	7
MroXI	GAANNNNTTC	3 cut(s)	1305, 1733, 1958
MspA1I	CMGCKG	2 cut(s)	1237, 1357
MspI	CCGG	5 cut(s)	8, 27, 455, 2247, 2437
MunI	CAATTG	2 cut(s)	362, 2445
Mva1269I	GAATGC	1 cut(s)	835
MvaI	CCWGG	9 cut(s)	533, 681, 1137, 1164, 1469, 1880, 1893, 1933, 2466
MwoI	GCNNNNNNNGC	1 cut(s)	458
NaeI	GCCGGC	1 cut(s)	9
NciI	CCSGG	4 cut(s)	27, 2247, 2248, 2437
NcoI	CCATGG	1 cut(s)	2304
NdeI	CATATG	1 cut(s)	1065
NgoMIV	GCCGGC	1 cut(s)	7
NlaIV	GGNNCC	4 cut(s)	6, 369, 1488, 2350
NmuCI	GTSAC	5 cut(s)	396, 784, 1347, 1813, 2431
NsiI	ATGCAT	3 cut(s)	135, 334, 745
NspI	RCATGY	2 cut(s)	961, 2364
PagI	TCATGA	1 cut(s)	543
PceI	AGGCCT	1 cut(s)	517
PcsI	WCGNNNNNNNCGW	1 cut(s)	42
PctI	GAATGC	1 cut(s)	835
PdiI	GCCGGC	1 cut(s)	9
PdmI	GAANNNNTTC	3 cut(s)	1305, 1733, 1958
PfeI	GAWTC	9 cut(s)	485, 770, 965, 989, 1639, 1874, 2060, 2276, 2510
PflFI	GACNNNGTC	2 cut(s)	437, 2466
PflMI	CCANNNNNTGG	2 cut(s)	1169, 2568
PfoI	TCCNGGA	2 cut(s)	531, 1891
PkrI	GCNGC	4 cut(s)	460, 875, 1356, 2506
PleI	GAGTC	4 cut(s)	1774, 2161, 2250, 2405
PmaCI	CACGTG	1 cut(s)	1615
PmlI	CACGTG	1 cut(s)	1615
PpsI	GAGTC	4 cut(s)	1774, 2161, 2250, 2405
Ppu21I	YACGTR	1 cut(s)	1615
PpuMI	RGGWCCY	1 cut(s)	1852
PshBI	ATTAAT	2 cut(s)	899, 2555
Psp124BI	GAGCTC	1 cut(s)	394
Psp5II	RGGWCCY	1 cut(s)	1852
Psp6I	CCWGG	9 cut(s)	531, 679, 1135, 1162, 1467, 1878, 1891, 1931, 2464
PspCI	CACGTG	1 cut(s)	1615
PspGI	CCWGG	9 cut(s)	531, 679, 1135, 1162, 1467, 1878, 1891, 1931, 2464
PspN4I	GGNNCC	4 cut(s)	6, 369, 1488, 2350
PspPI	GGNCC	4 cut(s)	24, 1153, 1852, 2301
PspPPI	RGGWCCY	1 cut(s)	1852
PsrI	GAACNNNNNNTAC	2 cut(s)	1400, 1432
PstI	CTGCAG	2 cut(s)	172, 1788
PstNI	CAGNNNCTG	2 cut(s)	1169, 1357
PsuI	RGATCY	1 cut(s)	676
PsyI	GACNNNGTC	2 cut(s)	437, 2466
PvuII	CAGCTG	1 cut(s)	1357
SacI	GAGCTC	1 cut(s)	394
SalI	GTCGAC	1 cut(s)	440
SatI	GCNGC	4 cut(s)	459, 874, 1355, 2505
Sau96I	GGNCC	4 cut(s)	24, 1153, 1852, 2301
ScaI	AGTACT	2 cut(s)	291, 715
SchI	GAGTC	4 cut(s)	1774, 2162, 2251, 2406
SduI	GDGCHC	2 cut(s)	394, 1518
SexAI	ACCWGGT	1 cut(s)	2464
SfaNI	GCATC	6 cut(s)	470, 730, 885, 1155, 2320, 2399
SfcI	CTRYAG	3 cut(s)	168, 789, 1784
SinI	GGWCC	2 cut(s)	1852, 2301
SmaI	CCCGGG	1 cut(s)	2248
SseBI	AGGCCT	1 cut(s)	517
SsiI	CCGC	2 cut(s)	874, 1235
SspI	AATATT	4 cut(s)	912, 1260, 1289, 2588
SspMI	CTAG	4 cut(s)	401, 1211, 1230, 1575
SstI	GAGCTC	1 cut(s)	394
StuI	AGGCCT	1 cut(s)	517
StyI	CCWWGG	3 cut(s)	60, 1574, 2304
TaiI	ACGT	2 cut(s)	956, 1617
TaqI	TCGA	5 cut(s)	177, 441, 631, 1438, 2088
TaqII	GACCGA	1 cut(s)	1335
TatI	WGTACW	7 cut(s)	145, 289, 713, 944, 1585, 2028, 2688
TauI	GCSGC	1 cut(s)	876
TfiI	GAWTC	9 cut(s)	485, 770, 965, 989, 1639, 1874, 2060, 2276, 2510
TscAI	CASTG	8 cut(s)	18, 190, 235, 793, 1543, 1915, 2008, 2667
TseFI	GTSAC	5 cut(s)	396, 784, 1347, 1813, 2431
TseI	GCWGC	3 cut(s)	458, 1354, 2504
Tsp45I	GTSAC	5 cut(s)	396, 784, 1347, 1813, 2431
TspGWI	ACGGA	3 cut(s)	384, 1811, 2023
TspMI	CCCGGG	1 cut(s)	2246
TspRI	CASTG	8 cut(s)	18, 190, 235, 793, 1543, 1915, 2008, 2667
Tth111I	GACNNNGTC	2 cut(s)	437, 2466
Van91I	CCANNNNNTGG	2 cut(s)	1169, 2568
VpaK11BI	GGWCC	2 cut(s)	1852, 2301
VspI	ATTAAT	2 cut(s)	899, 2555
XapI	RAATTY	4 cut(s)	1946, 1958, 2123, 2204
XceI	RCATGY	2 cut(s)	961, 2364
XmaI	CCCGGG	1 cut(s)	2246
XmaJI	CCTAGG	1 cut(s)	1574
XmiI	GTMKAC	2 cut(s)	441, 792
XmnI	GAANNNNTTC	3 cut(s)	1305, 1733, 1958
XspI	CTAG	4 cut(s)	401, 1211, 1230, 1575
ZrmI	AGTACT	2 cut(s)	291, 715
Zsp2I	ATGCAT	3 cut(s)	135, 334, 745

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.