Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000776.1

Orthogroup ID

OG0001815

Physical Location & Seq

Genomic Coordinates Forward (+)

170736 .. 178620

Gene Structure 7885 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000776.1_g000037.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3627 bp

atggcactagcacaacctgtcattgaccttagttccaatggtgaagacaatggtaggaggaggtcatcgaatgtgcatcagaagataaaactggaacctcctccggaacaccatcaacaggtcatggatatggaggttcagtatccaaacagtcttacagcactagcacctcctgccatcgtccttagttctgatgacgaagacaatggaagtagggagccacttcatctgtatccaaagattgtattggagcctcctcctcctacagaacatgatcaacgtgtcattgatatggaaactaaatcttcaaacaatattgcagcagtaggaccatctgtggtgttccttagttccgatgatgaagacgatgagagtaggatgatatttcatgagaaggttgtcttggagcctgttgatagacttctaaagaagagctctatggatagtgtagagatgaatgctcaaagaaaagagttggaaactatacctggattgaatatggggatgcataaagacataaaggacggtgtagagagcacggatcatatctggataaataaagatgtagatgttggtgcagcaggagatgtggccggtctagaactcattgattgtcacgggcatgatattctggttcaggattgtttagcaagcaaagatcacatagaagagttgaaaacattggccaaaaaagatgtagatattgatggagacagaacttctgaaagggagttcagtgatcaaagtaattctgaaagtatagaagatatacaaagcatagctccaagcacagaggtcagaagtctagttcatgaaaatgatatggtggccggggaaggtaatgtggaagatgatatgaaggatagtggtaaaatcaatgttgaggaagatgatagacatgacacagaggaagatgatgaaaacaatatcaaggaagatgatctgagtgatattgaggaagatgatgtaaatgataatgaggaagatgatgcaaatgatattgagggagaggatctaacagatgcatggaacgagatgacaatggcattagaatgtgccaaggatattgctgtcggtccttcagctgatgatccatctagtgaatgtggggaagaatgtgatcactacttcatcctgaaggatgatcttgggttagtgtgtcgtatttgtggagttattcagaaggggattgataccatatttgagttccagtataataagggaaaaaggagtacacgcacttatgtgcaagagccgcgggatgccaacaacacagagccaactgagagttcctcacttggaatcaagcttactactgggcgtgatttaatggaaacagaattttctgctcatccaagtcatagaaagcatatgaaaccacatcaagtagaggggtttaattttctttgtagcaatttgttgggagacaacccaggtggttgcattcttgctcatgcccctggttcaggaaagacttttctggttataagttttgtccagagttacttagccaggtttcccgatgctagaccacttgttgttctacctaaaaccattttggatacatggaagaaagagttccggatatggcaagttgaggacattcctttgcatgatttctatacttccaaggcagacaagaggtctcaacagttgaatgtattaaaacaatgggtagagcagaagagcatccttttcttagggtaccaacagttctctactataatgtgcgacattggcagtagcaagacatcggataaatgccgagaaattctgcagaagtcccctagtcttctcatattggatgaaggtcacacaccaaggaatgatgaaactaatcagtttcaagctcttgtaagagtacagaccccactaaaagtagttctctcaggaacactctatcaaaaccatgtcaaagaagtcttcactctcttagatcttgttcgtccaaagtttctgaaattggacacttcccgggagattgtgaagcggatcatgagcatagtacagatatcgggtgtgaggaaacagttaaaaggtggaggagattcagctttttttgacttagtagagcataccctcaagaaagatgaagactttaagaggaaggtagccattgtacaagatcttcgagaaatgaccaggaaggtgctccattattataaaggtgactttttagatgaacttcctgggcttgttgagttcacactactactcggcctcacttcaagacagaaagctgaatttgaaaaattgaagggattggacaagttgaggagaatgcctgttgggagccttgtctctatgcatccagagttgagatatctttcagaaaaaaatccatcaactgagaagggctgcacagttgataataagacgatggatcgattcttagaaaagttaaatttcagagatggagtaaaagctaaattctttcttaatatgcttgcgttgtgtgaatcaaatgatgagaagctactggttttcagccaatatctcctgcccctgaaacttatggagagattagctgtgaaggaaatgggttggagtctcaacaaggagatttttgtgttaaccggtgatacaaactctaagcaaaaagaatggtctatggaactctttaacacctcaccggatgctaaagtgttatttggttccattagagcttgtggggaaggaatctcgcttgtgggagcttctcgtgtccttattatggaagtccagctcaacccttcagtgactcggcaagcaattggacgtgcatttcgaccaggtcagaagaagaaagtgcacgtctatagattggtcgctgctgactcaccagaggaggatgaccacgtgctctcttataccaaggagatgatatcaaagatatggttcgagtggactgagagctgtggacatcaagactactctggtatgaagactgtagatctaaatgactctggtgatatgttcttggaaagtcagttgttgaaggaagatataaaggttttgcagaaaaggtttgtgctttcttcttaccttcattgcatcttcatgcatttggagcaagttggaattgccatatttcagcagcaacaagaatgcagacactttcccttattggttctaactcttcctgaattgcaagttcttgcttcaagtttctaccagttcaatggcatcagaaaagcttctgaggcttctcatcctttcagcaagttgaagttttggaccagtccaacaagaagttctatggtactctgtcaaccaaatactttgaaactcaagtgctatgatgaatttgagtactgtcgagggaatccgaatgttgtagtggagctcaagttcctcaaggggctcaagatcaaatatcaaacttctcctacgctggaaacatgtgatcatgtggattttccatggaaagctcaggcaaatcccttggcatgttcctcttcaacaaaagtttctttgatagatactctacaaccagcgtcgttgaggttggtggtagtgaacttctccattggatcgtcgtctgctaaggagcaggcgatacctgctctgataccatataatgtgggaagcgcgaacacgatagtaagaggctccgtcaagcctcgaaagccatatgagatgagttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03440 map03440

Pfam Domains

Protein Families

Helicase_C SNF2_N

Protein Analysis

1208

Amino Acids

136.4

Weight (kDa)

5.17

Isoelectric Point (pI)

42.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001815)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16390 AT2G16390 AT2G21450 AT2G21450 AT2G21450 AT2G21455
fragaria_vesca	FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760
malus_domestica	MD05G1059900.v1.1 MD10G1068100.v1.1
prunus_persica	Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1
pyrus_communis	pycom05g05130 pycom10g05390
rosa_chinensis	RchiOBHm_Chr6g0266061 RchiOBHm_Chr6g0266081
rosa_laevigata	RLG00000014118 RLG00000014121
rosa_multiflora	Rmu_sc0000776.1_g000029 Rmu_sc0000776.1_g000037
rosa_roxburghii	Rroxscaffold_174G00435180 Rroxscaffold_174G00435190 Rroxscaffold_7G00201990 Rroxscaffold_7G00202000
rosa_rugosa	Rorug06G0023000 Rorug06G0023700
rosa_samantha	Rh6AG144300 Rh6AG144400 Rh6BG144700 Rh6BG144900 Rh6CG141400 Rh6CG141600 Rh6DG129100 Rh6DG129200
rosa_wichuraiana	Rw1G008890 Rw6G012470 Rw6G012480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1487, 2163
Acc36I	ACCTGC	1 cut(s)	3550
Acc65I	GGTACC	1 cut(s)	1704
AccB1I	GGYRCC	1 cut(s)	1704
AccII	CGCG	2 cut(s)	1258, 3572
AccIII	TCCGGA	2 cut(s)	103, 1581
AciI	CCGC	3 cut(s)	1256, 1258, 1990
AclWI	GGATC	6 cut(s)	549, 1020, 1085, 2000, 2391, 3520
AcoI	YGGCCR	3 cut(s)	591, 684, 828
AcsI	RAATTY	6 cut(s)	1340, 1770, 2243, 2404, 2429, 3284
AcuI	CTGAAG	3 cut(s)	1065, 1157, 2718
AcvI	CACGTG	1 cut(s)	2839
AfaI	GTAC	7 cut(s)	1234, 1706, 1863, 2007, 2121, 3243, 3293
AfiI	CCNNNNNNNGG	3 cut(s)	118, 1466, 2713
AflIII	ACRYGT	2 cut(s)	280, 3380
AgeI	ACCGGT	1 cut(s)	2576
AhdI	GACNNNNNGTC	1 cut(s)	1642
AjiI	CACGTC	2 cut(s)	2759, 2794
AjnI	CCWGG	7 cut(s)	487, 1432, 1459, 1511, 2141, 2188, 2770
AjuI	GAANNNNNNNTTGG	6 cut(s)	386, 418, 1273, 1305, 3217, 3249
AleI	CACNNNNGTG	1 cut(s)	1244
AloI	GAACNNNNNNTCC	2 cut(s)	3314, 3346
Alw21I	GWGCWC	6 cut(s)	437, 539, 2154, 2793, 2844, 3327
Alw26I	GTCTC	5 cut(s)	705, 1419, 1650, 2305, 2555
Alw44I	GTGCAC	1 cut(s)	2789
AlwI	GGATC	6 cut(s)	549, 1020, 1085, 2000, 2391, 3520
Ama87I	CYCGRG	1 cut(s)	1974
Aor13HI	TCCGGA	2 cut(s)	103, 1581
AoxI	GGCC	4 cut(s)	591, 684, 828, 2218
ApaLI	GTGCAC	1 cut(s)	2789
ApeKI	GCWGC	5 cut(s)	320, 578, 2358, 2810, 3076
ApoI	RAATTY	6 cut(s)	1340, 1770, 2243, 2404, 2429, 3284
ArsI	GACNNNNNNTTYG	2 cut(s)	2748, 2780
AsiGI	ACCGGT	1 cut(s)	2576
Asp700I	GAANNNNTTC	2 cut(s)	1577, 3175
Asp718I	GGTACC	1 cut(s)	1704
AspLEI	GCGC	1 cut(s)	3572
AspS9I	GGNCC	3 cut(s)	329, 1076, 3216
AsuC2I	CCSGG	3 cut(s)	832, 1975, 1976
AsuHPI	GGTGA	6 cut(s)	53, 2180, 2591, 2622, 2811, 2960
AvaI	CYCGRG	1 cut(s)	1974
AvaII	GGWCC	3 cut(s)	329, 1076, 3216
BaeGI	GKGCMC	1 cut(s)	2793
BalI	TGGCCA	1 cut(s)	686
BanI	GGYRCC	1 cut(s)	1704
BanII	GRGCYC	3 cut(s)	437, 3327, 3345
BarI	GAAGNNNNNNTAC	2 cut(s)	2112, 2144
BauI	CACGAG	1 cut(s)	2700
BbrPI	CACGTG	1 cut(s)	2839
BbsI	GAAGAC	7 cut(s)	51, 207, 369, 1784, 1915, 2100, 2930
Bbv12I	GWGCWC	6 cut(s)	437, 539, 2154, 2793, 2844, 3327
BbvI	GCAGC	5 cut(s)	332, 590, 2345, 2797, 3088
BccI	CCATC	8 cut(s)	120, 185, 340, 701, 1102, 2350, 2374, 2408
BciT130I	CCWGG	7 cut(s)	489, 1434, 1461, 1513, 2143, 2190, 2772
BciVI	GTATCC	3 cut(s)	153, 243, 1555
BclI	TGATCA	4 cut(s)	274, 739, 1120, 3385
BcnI	CCSGG	3 cut(s)	832, 1975, 1976
BcoDI	GTCTC	5 cut(s)	705, 1419, 1650, 2305, 2555
BfaI	CTAG	7 cut(s)	8, 164, 599, 806, 1098, 1527, 1788
BfmI	CTRYAG	4 cut(s)	264, 1775, 2797, 2928
BfuAI	ACCTGC	1 cut(s)	3550
BfuI	GTATCC	3 cut(s)	153, 243, 1555
BglII	AGATCT	3 cut(s)	1936, 2125, 2932
BisI	GCNGC	6 cut(s)	321, 579, 1256, 2359, 2811, 3077
BlsI	GCNGC	6 cut(s)	322, 580, 1257, 2360, 2812, 3078
BmcAI	AGTACT	1 cut(s)	3293
Bme18I	GGWCC	3 cut(s)	329, 1076, 3216
BmeRI	GACNNNNNGTC	1 cut(s)	1642
BmeT110I	CYCGRG	1 cut(s)	1974
BmgBI	CACGTC	2 cut(s)	2759, 2794
BmgT120I	GGNCC	3 cut(s)	329, 1076, 3216
BmiI	GGNNCC	8 cut(s)	96, 219, 252, 408, 1706, 2294, 2656, 3592
BmrI	ACTGGG	1 cut(s)	1326
BmuI	ACTGGG	1 cut(s)	1326
BpiI	GAAGAC	7 cut(s)	51, 207, 369, 1784, 1915, 2100, 2930
BplI	GAGNNNNNCTC	2 cut(s)	1277, 1309
Bpu10I	CCTNAGC	2 cut(s)	3411, 3525
BpuEI	CTTGAG	5 cut(s)	2066, 3254, 3311, 3320, 3329
BpuMI	CCSGG	3 cut(s)	832, 1975, 1976
Bsa29I	ATCGAT	1 cut(s)	2386
BsaAI	YACGTR	1 cut(s)	2839
BsaI	GGTCTC	1 cut(s)	1650
BsaWI	WCCGGW	4 cut(s)	103, 1581, 2576, 2632
BsaXI	ACNNNNNCTCC	4 cut(s)	125, 155, 3314, 3344
Bsc4I	CCNNNNNNNGG	3 cut(s)	118, 1466, 2713
Bse118I	RCCGGY	2 cut(s)	593, 2576
Bse1I	ACTGG	6 cut(s)	96, 1210, 1321, 2484, 3154, 3219
Bse3DI	GCAATG	1 cut(s)	3028
BseAI	TCCGGA	2 cut(s)	103, 1581
BseBI	CCWGG	7 cut(s)	489, 1434, 1461, 1513, 2143, 2190, 2772
BseCI	ATCGAT	1 cut(s)	2386
BseLI	CCNNNNNNNGG	3 cut(s)	118, 1466, 2713
BseMI	GCAATG	1 cut(s)	3028
BseMII	CTCAG	7 cut(s)	935, 1275, 1902, 2340, 2880, 3171, 3425
BseNI	ACTGG	6 cut(s)	96, 1210, 1321, 2484, 3154, 3219
BseRI	GAGGAG	7 cut(s)	73, 90, 246, 249, 2058, 2290, 2840
BseSI	GKGCMC	1 cut(s)	2793
BseXI	GCAGC	5 cut(s)	332, 590, 2345, 2797, 3088
BsgI	GTGCAG	2 cut(s)	597, 2344
Bsh1236I	CGCG	2 cut(s)	1258, 3572
BshFI	GGCC	4 cut(s)	593, 686, 830, 2220
BshNI	GGYRCC	1 cut(s)	1704
BshTI	ACCGGT	1 cut(s)	2576
BshVI	ATCGAT	1 cut(s)	2386
BsiHKAI	GWGCWC	6 cut(s)	437, 539, 2154, 2793, 2844, 3327
BsiHKCI	CYCGRG	1 cut(s)	1974
BsiSI	CCGG	7 cut(s)	104, 594, 831, 1582, 1975, 2577, 2633
BslFI	GGGAC	1 cut(s)	1768
BslI	CCNNNNNNNGG	3 cut(s)	118, 1466, 2713
BsmAI	GTCTC	5 cut(s)	705, 1419, 1650, 2305, 2555
BsmFI	GGGAC	1 cut(s)	1768
BsmI	GAATGC	4 cut(s)	463, 1443, 2286, 3092
BsnI	GGCC	4 cut(s)	593, 686, 830, 2220
Bso31I	GGTCTC	1 cut(s)	1650
BsoBI	CYCGRG	1 cut(s)	1974
Bsp1286I	GDGCHC	7 cut(s)	437, 539, 2154, 2793, 2844, 3327, 3345
Bsp13I	TCCGGA	2 cut(s)	103, 1581
Bsp1407I	TGTACA	1 cut(s)	2119
Bsp19I	CCATGG	1 cut(s)	3401
BspACI	CCGC	3 cut(s)	1256, 1258, 1990
BspANI	GGCC	4 cut(s)	593, 686, 830, 2220
BspCNI	CTCAG	7 cut(s)	936, 1276, 1901, 2341, 2881, 3172, 3424
BspDI	ATCGAT	1 cut(s)	2386
BspEI	TCCGGA	2 cut(s)	103, 1581
BspFNI	CGCG	2 cut(s)	1258, 3572
BspHI	TCATGA	3 cut(s)	388, 811, 1995
BspLI	GGNNCC	8 cut(s)	96, 219, 252, 408, 1706, 2294, 2656, 3592
BspMAI	CTGCAG	1 cut(s)	1779
BspMI	ACCTGC	1 cut(s)	3550
BspPI	GGATC	6 cut(s)	549, 1020, 1085, 2000, 2391, 3520
BspQI	GCTCTTC	2 cut(s)	425, 1679
BspT107I	GGYRCC	1 cut(s)	1704
BspTNI	GGTCTC	1 cut(s)	1650
BsrDI	GCAATG	1 cut(s)	3028
BsrFI	RCCGGY	2 cut(s)	593, 2576
BsrGI	TGTACA	1 cut(s)	2119
BsrI	ACTGG	6 cut(s)	96, 1210, 1321, 2484, 3154, 3219
BssAI	RCCGGY	2 cut(s)	593, 2576
BssSI	CACGAG	1 cut(s)	2700
BssT1I	CCWWGG	6 cut(s)	1059, 1629, 1820, 2853, 3401, 3423
Bst2BI	CACGAG	1 cut(s)	2700
Bst2UI	CCWGG	7 cut(s)	489, 1434, 1461, 1513, 2143, 2190, 2772
Bst4CI	ACNGT	8 cut(s)	152, 527, 1653, 1713, 2031, 2365, 2929, 3296
Bst6I	CTCTTC	5 cut(s)	425, 663, 1679, 3123, 3442
BstAPI	GCANNNNNTGC	1 cut(s)	173
BstAUI	TGTACA	1 cut(s)	2119
BstBAI	YACGTR	1 cut(s)	2839
BstC8I	GCNNGC	4 cut(s)	652, 2448, 2748, 3534
BstDSI	CCRYGG	2 cut(s)	1256, 3401
BstENI	CCTNNNNNAGG	1 cut(s)	1464
BstFNI	CGCG	2 cut(s)	1258, 3572
BstHHI	GCGC	1 cut(s)	3572
BstMAI	GTCTC	5 cut(s)	705, 1419, 1650, 2305, 2555
BstMWI	GCNNNNNNNGC	7 cut(s)	173, 1255, 1737, 3049, 3182, 3542, 3607
BstNI	CCWGG	7 cut(s)	489, 1434, 1461, 1513, 2143, 2190, 2772
BstNSI	RCATGY	2 cut(s)	3384, 3432
BstSFI	CTRYAG	4 cut(s)	264, 1775, 2797, 2928
BstSLI	GKGCMC	1 cut(s)	2793
BstUI	CGCG	2 cut(s)	1258, 3572
BstV1I	GCAGC	5 cut(s)	332, 590, 2345, 2797, 3088
BstV2I	GAAGAC	7 cut(s)	51, 207, 369, 1784, 1915, 2100, 2930
BstX2I	RGATCY	4 cut(s)	1012, 1936, 2125, 2932
BstXI	CCANNNNNNTGG	1 cut(s)	3161
BstYI	RGATCY	4 cut(s)	1012, 1936, 2125, 2932
Bsu15I	ATCGAT	1 cut(s)	2386
BsuI	GTATCC	3 cut(s)	153, 243, 1555
BsuRI	GGCC	4 cut(s)	593, 686, 830, 2220
BsuTUI	ATCGAT	1 cut(s)	2386
BtgI	CCRYGG	2 cut(s)	1256, 3401
BtrI	CACGTC	2 cut(s)	2759, 2794
BtsIMutI	CAGTG	2 cut(s)	742, 2742
BveI	ACCTGC	1 cut(s)	3550
Cac8I	GCNNGC	4 cut(s)	652, 2448, 2748, 3534
CciI	TCATGA	3 cut(s)	388, 811, 1995
CfoI	GCGC	1 cut(s)	3572
Cfr10I	RCCGGY	2 cut(s)	593, 2576
Cfr13I	GGNCC	3 cut(s)	329, 1076, 3216
Cfr42I	CCGCGG	1 cut(s)	1259
Cfr9I	CCCGGG	1 cut(s)	1974
ClaI	ATCGAT	1 cut(s)	2386
CseI	GACGC	1 cut(s)	3465
CsiI	ACCWGGT	1 cut(s)	2770
Csp6I	GTAC	7 cut(s)	1233, 1705, 1862, 2006, 2120, 3242, 3292
CspAI	ACCGGT	1 cut(s)	2576
CspCI	CAANNNNNGTGG	2 cut(s)	1417, 1452
CviQI	GTAC	7 cut(s)	1233, 1705, 1862, 2006, 2120, 3242, 3292
DriI	GACNNNNNGTC	1 cut(s)	1642
EaeI	YGGCCR	3 cut(s)	591, 684, 828
Eam1104I	CTCTTC	5 cut(s)	425, 663, 1679, 3123, 3442
Eam1105I	GACNNNNNGTC	1 cut(s)	1642
EarI	CTCTTC	5 cut(s)	425, 663, 1679, 3123, 3442
Ecl136II	GAGCTC	2 cut(s)	435, 3325
Eco130I	CCWWGG	6 cut(s)	1059, 1629, 1820, 2853, 3401, 3423
Eco24I	GRGCYC	3 cut(s)	437, 3327, 3345
Eco31I	GGTCTC	1 cut(s)	1650
Eco32I	GATATC	3 cut(s)	2013, 2324, 2865
Eco47I	GGWCC	3 cut(s)	329, 1076, 3216
Eco53kI	GAGCTC	2 cut(s)	435, 3325
Eco57I	CTGAAG	3 cut(s)	1065, 1157, 2718
Eco72I	CACGTG	1 cut(s)	2839
Eco88I	CYCGRG	1 cut(s)	1974
EcoICRI	GAGCTC	2 cut(s)	435, 3325
EcoNI	CCTNNNNNAGG	1 cut(s)	1464
EcoRII	CCWGG	7 cut(s)	487, 1432, 1459, 1511, 2141, 2188, 2770
EcoRV	GATATC	3 cut(s)	2013, 2324, 2865
EcoT14I	CCWWGG	6 cut(s)	1059, 1629, 1820, 2853, 3401, 3423
EcoT22I	ATGCAT	4 cut(s)	510, 1027, 2310, 3045
EcoT38I	GRGCYC	3 cut(s)	437, 3327, 3345
ErhI	CCWWGG	6 cut(s)	1059, 1629, 1820, 2853, 3401, 3423
FalI	AAGNNNNNCTT	2 cut(s)	386, 418
FaqI	GGGAC	1 cut(s)	1768
FauI	CCCGC	1 cut(s)	1251
FauNDI	CATATG	2 cut(s)	1371, 3613
FbaI	TGATCA	4 cut(s)	274, 739, 1120, 3385
Fnu4HI	GCNGC	6 cut(s)	321, 579, 1256, 2359, 2811, 3077
FriOI	GRGCYC	3 cut(s)	437, 3327, 3345
Fsp4HI	GCNGC	6 cut(s)	321, 579, 1256, 2359, 2811, 3077
FspBI	CTAG	7 cut(s)	8, 164, 599, 806, 1098, 1527, 1788
GlaI	GCGC	1 cut(s)	3571
GluI	GCNGC	6 cut(s)	321, 579, 1256, 2359, 2811, 3077
HaeIII	GGCC	4 cut(s)	593, 686, 830, 2220
HapII	CCGG	7 cut(s)	104, 594, 831, 1582, 1975, 2577, 2633
HgaI	GACGC	1 cut(s)	3465
HhaI	GCGC	1 cut(s)	3572
Hin6I	GCGC	1 cut(s)	3570
HinP1I	GCGC	1 cut(s)	3570
HincII	GTYRAC	2 cut(s)	2574, 3251
HindII	GTYRAC	2 cut(s)	2574, 3251
HindIII	AAGCTT	2 cut(s)	1307, 3174
HpaI	GTTAAC	1 cut(s)	2574
HpaII	CCGG	7 cut(s)	104, 594, 831, 1582, 1975, 2577, 2633
HphI	GGTGA	6 cut(s)	53, 2180, 2591, 2622, 2811, 2960
Hpy166II	GTNNAC	8 cut(s)	1235, 2205, 2574, 2791, 2886, 2900, 3251, 3499
Hpy8I	GTNNAC	8 cut(s)	1235, 2205, 2574, 2791, 2886, 2900, 3251, 3499
Hpy99I	CGWCG	2 cut(s)	3481, 3520
HpyCH4III	ACNGT	8 cut(s)	152, 527, 1653, 1713, 2031, 2365, 2929, 3296
HpyCH4IV	ACGT	4 cut(s)	280, 2758, 2793, 2838
HpyF10VI	GCNNNNNNNGC	7 cut(s)	173, 1255, 1737, 3049, 3182, 3542, 3607
HpySE526I	ACGT	4 cut(s)	280, 2758, 2793, 2838
HspAI	GCGC	1 cut(s)	3570
Kpn2I	TCCGGA	2 cut(s)	103, 1581
KpnI	GGTACC	1 cut(s)	1708
Ksp22I	TGATCA	4 cut(s)	274, 739, 1120, 3385
KspAI	GTTAAC	1 cut(s)	2574
KspI	CCGCGG	1 cut(s)	1259
LguI	GCTCTTC	2 cut(s)	425, 1679
Lsp1109I	GCAGC	5 cut(s)	332, 590, 2345, 2797, 3088
MabI	ACCWGGT	1 cut(s)	2770
MaeI	CTAG	7 cut(s)	8, 164, 599, 806, 1098, 1527, 1788
MaeII	ACGT	4 cut(s)	280, 2758, 2793, 2838
MaeIII	GTNAC	5 cut(s)	614, 1502, 1811, 2168, 2737
MfeI	CAATTG	1 cut(s)	2751
MflI	RGATCY	4 cut(s)	1012, 1936, 2125, 2932
MhlI	GDGCHC	7 cut(s)	437, 539, 2154, 2793, 2844, 3327, 3345
MlsI	TGGCCA	1 cut(s)	686
MluNI	TGGCCA	1 cut(s)	686
MlyI	GAGTC	4 cut(s)	2557, 2734, 2810, 2936
MmeI	TCCRAC	4 cut(s)	456, 2525, 3037, 3248
Mox20I	TGGCCA	1 cut(s)	686
Mph1103I	ATGCAT	4 cut(s)	510, 1027, 2310, 3045
MroI	TCCGGA	2 cut(s)	103, 1581
MroXI	GAANNNNTTC	2 cut(s)	1577, 3175
MscI	TGGCCA	1 cut(s)	686
MseI	TTAA	9 cut(s)	1328, 1398, 1664, 2033, 2100, 2402, 2439, 2573, 2622
MslI	CAYNNNNRTG	7 cut(s)	128, 290, 621, 816, 1051, 1244, 3038
Msp20I	TGGCCA	1 cut(s)	686
MspA1I	CMGCKG	2 cut(s)	1085, 1258
MspI	CCGG	7 cut(s)	104, 594, 831, 1582, 1975, 2577, 2633
MunI	CAATTG	1 cut(s)	2751
Mva1269I	GAATGC	4 cut(s)	463, 1443, 2286, 3092
MvaI	CCWGG	7 cut(s)	489, 1434, 1461, 1513, 2143, 2190, 2772
MvnI	CGCG	2 cut(s)	1258, 3572
MwoI	GCNNNNNNNGC	7 cut(s)	173, 1255, 1737, 3049, 3182, 3542, 3607
NciI	CCSGG	3 cut(s)	832, 1975, 1976
NcoI	CCATGG	1 cut(s)	3401
NdeI	CATATG	2 cut(s)	1371, 3613
NlaIV	GGNNCC	8 cut(s)	96, 219, 252, 408, 1706, 2294, 2656, 3592
NmeAIII	GCCGAG	3 cut(s)	1790, 2196, 2722
NmuCI	GTSAC	4 cut(s)	614, 1811, 2168, 2737
NsiI	ATGCAT	4 cut(s)	510, 1027, 2310, 3045
NspI	RCATGY	2 cut(s)	3384, 3432
OliI	CACNNNNGTG	1 cut(s)	1244
PagI	TCATGA	3 cut(s)	388, 811, 1995
PciI	ACATGT	1 cut(s)	3380
PciSI	GCTCTTC	2 cut(s)	425, 1679
PcsI	WCGNNNNNNNCGW	1 cut(s)	2764
PctI	GAATGC	4 cut(s)	463, 1443, 2286, 3092
PdmI	GAANNNNTTC	2 cut(s)	1577, 3175
PfeI	GAWTC	6 cut(s)	1302, 2048, 2388, 2459, 2679, 3304
PflFI	GACNNNGTC	1 cut(s)	2772
PinAI	ACCGGT	1 cut(s)	2576
PkrI	GCNGC	6 cut(s)	322, 580, 1257, 2360, 2812, 3078
PleI	GAGTC	4 cut(s)	2556, 2734, 2810, 2936
PmaCI	CACGTG	1 cut(s)	2839
PmlI	CACGTG	1 cut(s)	2839
PpsI	GAGTC	4 cut(s)	2556, 2734, 2810, 2936
Ppu21I	YACGTR	1 cut(s)	2839
PscI	ACATGT	1 cut(s)	3380
PsiI	TTATAA	2 cut(s)	1487, 2163
Psp124BI	GAGCTC	2 cut(s)	437, 3327
Psp6I	CCWGG	7 cut(s)	487, 1432, 1459, 1511, 2141, 2188, 2770
PspCI	CACGTG	1 cut(s)	2839
PspGI	CCWGG	7 cut(s)	487, 1432, 1459, 1511, 2141, 2188, 2770
PspN4I	GGNNCC	8 cut(s)	96, 219, 252, 408, 1706, 2294, 2656, 3592
PspPI	GGNCC	3 cut(s)	329, 1076, 3216
PsrI	GAACNNNNNNTAC	2 cut(s)	1697, 1729
PstI	CTGCAG	1 cut(s)	1779
PsuI	RGATCY	4 cut(s)	1012, 1936, 2125, 2932
PsyI	GACNNNGTC	1 cut(s)	2772
PvuII	CAGCTG	1 cut(s)	1085
RsaI	GTAC	7 cut(s)	1234, 1706, 1863, 2007, 2121, 3243, 3293
RsaNI	GTAC	7 cut(s)	1233, 1705, 1862, 2006, 2120, 3242, 3292
RseI	CAYNNNNRTG	7 cut(s)	128, 290, 621, 816, 1051, 1244, 3038
SacI	GAGCTC	2 cut(s)	437, 3327
SacII	CCGCGG	1 cut(s)	1259
SapI	GCTCTTC	2 cut(s)	425, 1679
SaqAI	TTAA	9 cut(s)	1328, 1398, 1664, 2033, 2100, 2402, 2439, 2573, 2622
SatI	GCNGC	6 cut(s)	321, 579, 1256, 2359, 2811, 3077
Sau96I	GGNCC	3 cut(s)	329, 1076, 3216
ScaI	AGTACT	1 cut(s)	3293
SchI	GAGTC	4 cut(s)	2557, 2734, 2810, 2936
SduI	GDGCHC	7 cut(s)	437, 539, 2154, 2793, 2844, 3327, 3345
SexAI	ACCWGGT	1 cut(s)	2770
SfcI	CTRYAG	4 cut(s)	264, 1775, 2797, 2928
Sfr303I	CCGCGG	1 cut(s)	1259
SgrBI	CCGCGG	1 cut(s)	1259
SinI	GGWCC	3 cut(s)	329, 1076, 3216
SmaI	CCCGGG	1 cut(s)	1976
SmiMI	CAYNNNNRTG	7 cut(s)	128, 290, 621, 816, 1051, 1244, 3038
SmlI	CTYRAG	5 cut(s)	2081, 3269, 3326, 3335, 3344
SmoI	CTYRAG	5 cut(s)	2081, 3269, 3326, 3335, 3344
SsiI	CCGC	3 cut(s)	1256, 1258, 1990
SspI	AATATT	1 cut(s)	316
SspMI	CTAG	7 cut(s)	8, 164, 599, 806, 1098, 1527, 1788
SstI	GAGCTC	2 cut(s)	437, 3327
StyI	CCWWGG	6 cut(s)	1059, 1629, 1820, 2853, 3401, 3423
TaaI	ACNGT	8 cut(s)	152, 527, 1653, 1713, 2031, 2365, 2929, 3296
TaiI	ACGT	4 cut(s)	283, 2761, 2796, 2841
TaqI	TCGA	7 cut(s)	68, 2131, 2386, 2767, 2880, 3298, 3604
TaqII	GACCGA	1 cut(s)	1064
TatI	WGTACW	5 cut(s)	1232, 1861, 2005, 2119, 3291
TauI	GCSGC	1 cut(s)	1258
TfiI	GAWTC	6 cut(s)	1302, 2048, 2388, 2459, 2679, 3304
Tru1I	TTAA	9 cut(s)	1328, 1398, 1664, 2033, 2100, 2402, 2439, 2573, 2622
Tru9I	TTAA	9 cut(s)	1328, 1398, 1664, 2033, 2100, 2402, 2439, 2573, 2622
TscAI	CASTG	2 cut(s)	742, 2742
TseFI	GTSAC	4 cut(s)	614, 1811, 2168, 2737
TseI	GCWGC	5 cut(s)	320, 578, 2358, 2810, 3076
Tsp45I	GTSAC	4 cut(s)	614, 1811, 2168, 2737
TspGWI	ACGGA	2 cut(s)	554, 3583
TspMI	CCCGGG	1 cut(s)	1974
TspRI	CASTG	2 cut(s)	742, 2742
Tth111I	GACNNNGTC	1 cut(s)	2772
VneI	GTGCAC	1 cut(s)	2789
VpaK11BI	GGWCC	3 cut(s)	329, 1076, 3216
XagI	CCTNNNNNAGG	1 cut(s)	1464
XapI	RAATTY	6 cut(s)	1340, 1770, 2243, 2404, 2429, 3284
XbaI	TCTAGA	1 cut(s)	598
XceI	RCATGY	2 cut(s)	3384, 3432
XmaI	CCCGGG	1 cut(s)	1974
XmnI	GAANNNNTTC	2 cut(s)	1577, 3175
XspI	CTAG	7 cut(s)	8, 164, 599, 806, 1098, 1527, 1788
ZrmI	AGTACT	1 cut(s)	3293
Zsp2I	ATGCAT	4 cut(s)	510, 1027, 2310, 3045

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.