Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0001815

Physical Location & Seq

Genomic Coordinates Reverse (-)

10455084 .. 10458106

Gene Structure 3023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1059900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGTTTGAGTTCCAATATAGCAAGGCTAAAAGGACCAGACGAACTTACATGTGTGAGTCACGGAATGCTAACTATACCGAGTCAGCTCAGAATTTCTCAGTTGGACTGAAATCTACTAGGGACAATCTAATGGCAACAGAAATTTCTGCTCATCCAAGGCACCGAAATAAAATGAAACCACATCAAGTGGAGGGCTTTAACTTTCTCGCTAGCAACTTGCTGGGTGATAATCCAGGGGGTTGCATTTTGGCCCATGCCCCTGGTTCTGGAAAGACGTTGTTGATTATAAGTTTTGTTCAGAGTTTCCTGGTTAGATTTCCCTATGCTAGACCATTGATCGTTCTACCTAAAGGTATTTTGGCTACATGGAAGCAAGAGTTCCAGAAATGGCAAGTGGAGGACATTCCGTTGCATGATCTATACACTTCAAAAGCAGAGAACCGGTCCCGGCAGCTGGTTATTTTAAAGAAGTGGGTAGAGCTGAAGAGCATCCTTTTTCTTGGTTATCAACAGTTCTCCACCATAATGTGTGACAATGGGACCAGTAAAGCATCAGTTGATTGTCGAGAAATGCTGTTGAAGGTCCCTAGCATTCTGATTTTAGATGAAGGCCACACTCCAAGGAATGACAATACCAATTTGCTACAGTCCCTTGCAAGAGTCCAAACACCTCTAAAAGTAGTCCTCTCAGGAACCCTTTATCAGAATCATGTGAAAGAAGTTTTCAACATTTTAAATCTTGTTCGTCCAAAGTTTCTGAAATTGGATACTTCCCGGGATGTGGCTAAGCGTATCATGAGTAGAGTACAAATATCAGGTGCGAGGAGACAATTAAAAACTGGTACAAATTCAGCTCTATTTGACTTGATAGAATACACTCTCCAGAAAGATGAAGATTATAAAAGGAAAGAGGCTGTCATACAAGATCTTCGAGAGATGACCAGGAAGGTCCTGCATTACTACAAAGGAGATTCTCTGGACAAACTCCCCGGTCTTGTTGATTATACCGTACTACTCAACCTTAGTTCAAGACAGGAGCTTGAAGTGAAAAAAATGAAGAAACTGGATTACTTCAAGAAAGCTTCTGTGGGTAGCCTTGTTTATATGCATCCAGAGTTGAAATCTCTTACAGAGAAATGTTCATTGACTGGCGAAAAAGGCTGTGAAATTGGTAATGACAAGATGGATACAATTGTAGAAAAAATAAATGTGAAAGATGGAGTTAAAGCTAATTTCTTTCTTAGTTTACTACGCCTGTGTGAATCAACTCGTGAGAAGCTGCTGGTGTTCAGCCAGTATATCCTGCCGCTGAAATTTATGGAGAGATTAGCAGTGAAGCTAAAGGGTTGGAGTCTAAACAAGGAAATTTTTGTGGTTACCGGCGATTCAAATTCAACGCTTAGGGAACAGTCTGTAGAAAGCTTTAACAATTCAGCTGATGCGAAAGTCTTCTTTGGCTCCATTAGAGCCTGTGGAGAAGGAATCTCTCTAGTGGGGGCTTCTCGCATCCTAATTGTTGATGTTCCTTTGAACCCTTCAGTAACTCGCCAGGCAATAGGCCGGACATTTCGACCAGGACAAAAGAAGAAAGTATACGTCTATAGATTGGTTGCTGCTGATTCGCCTGAAGAGGAAAGTCGCTTAATCTGCTGCAGGAAGGAATTGATTTTGAAGAGGTGGTTCGAGTGGAACGAGAGCTGTGGACATCAAGACTTTGATTTGAAGACTGTTGACTTGCATGACTGTGGTGATATGTTCTTGGAAAGTCGATTGTTGCAGGAAGATGTAAAGGTTCTACAGAAAAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03440 map03440

Pfam Domains

Protein Families

Helicase_C SNF2_N

Protein Analysis

603

Amino Acids

68.91

Weight (kDa)

9.4

Isoelectric Point (pI)

41.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ResIII	PF04851	57 - 232	6.2e-07	Type III restriction enzyme, res subunit
SNF2-rel_dom	PF00176	61 - 360	5e-25	SNF2-related domain
Helicase_C	PF00271	413 - 526	2.4e-12	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001815)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16390 AT2G16390 AT2G21450 AT2G21450 AT2G21450 AT2G21455
fragaria_vesca	FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760
malus_domestica	MD05G1059900.v1.1 MD10G1068100.v1.1
prunus_persica	Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1
pyrus_communis	pycom05g05130 pycom10g05390
rosa_chinensis	RchiOBHm_Chr6g0266061 RchiOBHm_Chr6g0266081
rosa_laevigata	RLG00000014118 RLG00000014121
rosa_multiflora	Rmu_sc0000776.1_g000029 Rmu_sc0000776.1_g000037
rosa_roxburghii	Rroxscaffold_174G00435180 Rroxscaffold_174G00435190 Rroxscaffold_7G00201990 Rroxscaffold_7G00202000
rosa_rugosa	Rorug06G0023000 Rorug06G0023700
rosa_samantha	Rh6AG144300 Rh6AG144400 Rh6BG144700 Rh6BG144900 Rh6CG141400 Rh6CG141600 Rh6DG129100 Rh6DG129200
rosa_wichuraiana	Rw1G008890 Rw6G012470 Rw6G012480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	287, 900
AccB1I	GGYRCC	1 cut(s)	159
AccI	GTMKAC	1 cut(s)	1593
AciI	CCGC	1 cut(s)	1307
AcsI	RAATTY	6 cut(s)	91, 141, 847, 1313, 1365, 1390
AcuI	CTGAAG	3 cut(s)	503, 1521, 1647
AfaI	GTAC	3 cut(s)	807, 844, 1011
AfiI	CCNNNNNNNGG	3 cut(s)	266, 454, 781
AflIII	ACRYGT	1 cut(s)	48
AgeI	ACCGGT	1 cut(s)	441
AjnI	CCWGG	6 cut(s)	232, 259, 306, 941, 1548, 1573
Alw26I	GTCTC	1 cut(s)	820
Ama87I	CYCGRG	1 cut(s)	774
AoxI	GGCC	3 cut(s)	249, 610, 1558
ApeKI	GCWGC	4 cut(s)	451, 1279, 1613, 1650
ApoI	RAATTY	6 cut(s)	91, 141, 847, 1313, 1365, 1390
AsiGI	ACCGGT	1 cut(s)	441
Asp700I	GAANNNNTTC	1 cut(s)	1448
AspS9I	GGNCC	6 cut(s)	33, 250, 444, 540, 583, 949
AsuC2I	CCSGG	4 cut(s)	448, 775, 776, 990
AsuHPI	GGTGA	2 cut(s)	236, 1760
AsuNHI	GCTAGC	1 cut(s)	209
AvaI	CYCGRG	1 cut(s)	774
AvaII	GGWCC	5 cut(s)	33, 444, 540, 583, 949
BaeI	ACNNNNGTAYC	2 cut(s)	1179, 1212
BanI	GGYRCC	1 cut(s)	159
BarI	GAAGNNNNNNTAC	2 cut(s)	1577, 1609
BauI	CACGAG	1 cut(s)	1269
BbsI	GAAGAC	2 cut(s)	1441, 1730
BbvI	GCAGC	4 cut(s)	463, 1266, 1600, 1637
BccI	CCATC	2 cut(s)	1177, 1211
BciT130I	CCWGG	6 cut(s)	234, 261, 308, 943, 1550, 1575
BciVI	GTATCC	2 cut(s)	760, 1180
BcnI	CCSGG	4 cut(s)	448, 775, 776, 990
BcoDI	GTCTC	1 cut(s)	820
BfaI	CTAG	5 cut(s)	117, 210, 327, 588, 1490
BfmI	CTRYAG	5 cut(s)	644, 1413, 1600, 1651, 1796
BfuI	GTATCC	2 cut(s)	760, 1180
BglII	AGATCT	1 cut(s)	925
BisI	GCNGC	5 cut(s)	452, 1280, 1307, 1614, 1651
BlpI	GCTNAGC	1 cut(s)	786
BlsI	GCNGC	5 cut(s)	453, 1281, 1308, 1615, 1652
Bme18I	GGWCC	5 cut(s)	33, 444, 540, 583, 949
BmeT110I	CYCGRG	1 cut(s)	774
BmgT120I	GGNCC	6 cut(s)	33, 250, 444, 540, 583, 949
BmiI	GGNNCC	6 cut(s)	161, 446, 541, 585, 694, 1459
BmsI	GCATC	5 cut(s)	498, 560, 1117, 1429, 1515
BmtI	GCTAGC	1 cut(s)	213
BpiI	GAAGAC	2 cut(s)	1441, 1730
BpmI	CTGGAG	1 cut(s)	866
Bpu10I	CCTNAGC	1 cut(s)	1400
Bpu1102I	GCTNAGC	1 cut(s)	786
BpuMI	CCSGG	4 cut(s)	448, 775, 776, 990
BsaJI	CCNNGG	6 cut(s)	155, 233, 259, 620, 774, 988
BsaWI	WCCGGW	1 cut(s)	441
Bsc4I	CCNNNNNNNGG	3 cut(s)	266, 454, 781
Bse118I	RCCGGY	2 cut(s)	441, 1379
Bse1I	ACTGG	5 cut(s)	543, 844, 1068, 1153, 1294
BseBI	CCWGG	6 cut(s)	234, 261, 308, 943, 1550, 1575
BseDI	CCNNGG	6 cut(s)	155, 233, 259, 620, 774, 988
BseGI	GGATG	5 cut(s)	151, 489, 784, 1108, 1506
BseLI	CCNNNNNNNGG	3 cut(s)	266, 454, 781
BseMII	CTCAG	3 cut(s)	101, 111, 702
BseNI	ACTGG	5 cut(s)	543, 844, 1068, 1153, 1294
BseRI	GAGGAG	1 cut(s)	838
BseXI	GCAGC	4 cut(s)	463, 1266, 1600, 1637
BseYI	CCCAGC	1 cut(s)	220
BshFI	GGCC	3 cut(s)	251, 612, 1560
BshNI	GGYRCC	1 cut(s)	159
BshTI	ACCGGT	1 cut(s)	441
BsiHKCI	CYCGRG	1 cut(s)	774
BsiSI	CCGG	6 cut(s)	442, 448, 775, 990, 1380, 1561
BslFI	GGGAC	5 cut(s)	134, 430, 553, 569, 634
BslI	CCNNNNNNNGG	3 cut(s)	266, 454, 781
BsmAI	GTCTC	1 cut(s)	820
BsmFI	GGGAC	5 cut(s)	134, 430, 553, 569, 634
BsmI	GAATGC	2 cut(s)	70, 591
BsnI	GGCC	3 cut(s)	251, 612, 1560
BsoBI	CYCGRG	1 cut(s)	774
Bsp143I	GATC	3 cut(s)	336, 415, 925
Bsp1720I	GCTNAGC	1 cut(s)	786
BspACI	CCGC	1 cut(s)	1307
BspANI	GGCC	3 cut(s)	251, 612, 1560
BspCNI	CTCAG	3 cut(s)	100, 110, 701
BspHI	TCATGA	1 cut(s)	795
BspLI	GGNNCC	6 cut(s)	161, 446, 541, 585, 694, 1459
BspMAI	CTGCAG	1 cut(s)	1655
BspOI	GCTAGC	1 cut(s)	213
BspQI	GCTCTTC	1 cut(s)	479
BspT107I	GGYRCC	1 cut(s)	159
BsrFI	RCCGGY	2 cut(s)	441, 1379
BsrI	ACTGG	5 cut(s)	543, 844, 1068, 1153, 1294
BssAI	RCCGGY	2 cut(s)	441, 1379
BssECI	CCNNGG	6 cut(s)	155, 233, 259, 620, 774, 988
BssMI	GATC	3 cut(s)	336, 415, 925
BssNAI	GTATAC	1 cut(s)	1594
BssSI	CACGAG	1 cut(s)	1269
BssT1I	CCWWGG	2 cut(s)	155, 620
Bst1107I	GTATAC	1 cut(s)	1594
Bst2BI	CACGAG	1 cut(s)	1269
Bst2UI	CCWGG	6 cut(s)	234, 261, 308, 943, 1550, 1575
Bst4CI	ACNGT	6 cut(s)	513, 648, 1009, 1410, 1729, 1745
Bst6I	CTCTTC	3 cut(s)	479, 1623, 1667
BstC8I	GCNNGC	1 cut(s)	211
BstDEI	CTNAG	7 cut(s)	87, 97, 688, 786, 1022, 1241, 1400
BstEII	GGTNACC	1 cut(s)	1375
BstF5I	GGATG	5 cut(s)	151, 489, 784, 1108, 1506
BstKTI	GATC	3 cut(s)	339, 418, 928
BstMAI	GTCTC	1 cut(s)	820
BstMBI	GATC	3 cut(s)	336, 415, 925
BstMWI	GCNNNNNNNGC	2 cut(s)	1158, 1647
BstNI	CCWGG	6 cut(s)	234, 261, 308, 943, 1550, 1575
BstNSI	RCATGY	1 cut(s)	52
BstPI	GGTNACC	1 cut(s)	1375
BstSFI	CTRYAG	5 cut(s)	644, 1413, 1600, 1651, 1796
BstV1I	GCAGC	4 cut(s)	463, 1266, 1600, 1637
BstV2I	GAAGAC	2 cut(s)	1441, 1730
BstX2I	RGATCY	1 cut(s)	925
BstXI	CCANNNNNNTGG	1 cut(s)	260
BstYI	RGATCY	1 cut(s)	925
BstZ17I	GTATAC	1 cut(s)	1594
BsuI	GTATCC	2 cut(s)	760, 1180
BsuRI	GGCC	3 cut(s)	251, 612, 1560
BtsCI	GGATG	5 cut(s)	151, 489, 784, 1108, 1506
BtsI	GCAGTG	1 cut(s)	1338
BtsIMutI	CAGTG	1 cut(s)	1338
Cac8I	GCNNGC	1 cut(s)	211
CciI	TCATGA	1 cut(s)	795
Cfr10I	RCCGGY	2 cut(s)	441, 1379
Cfr13I	GGNCC	6 cut(s)	33, 250, 444, 540, 583, 949
Cfr9I	CCCGGG	1 cut(s)	774
Csp6I	GTAC	3 cut(s)	806, 843, 1010
CspAI	ACCGGT	1 cut(s)	441
CviAII	CATG	7 cut(s)	49, 254, 366, 413, 710, 796, 1739
CviQI	GTAC	3 cut(s)	806, 843, 1010
DdeI	CTNAG	7 cut(s)	87, 97, 688, 786, 1022, 1241, 1400
DpnI	GATC	3 cut(s)	338, 417, 927
DpnII	GATC	3 cut(s)	336, 415, 925
DraI	TTTAAA	2 cut(s)	465, 735
Eam1104I	CTCTTC	3 cut(s)	479, 1623, 1667
EarI	CTCTTC	3 cut(s)	479, 1623, 1667
Eco130I	CCWWGG	2 cut(s)	155, 620
Eco47I	GGWCC	5 cut(s)	33, 444, 540, 583, 949
Eco57I	CTGAAG	3 cut(s)	503, 1521, 1647
Eco88I	CYCGRG	1 cut(s)	774
Eco91I	GGTNACC	1 cut(s)	1375
EcoO109I	RGGNCCY	2 cut(s)	583, 949
EcoO65I	GGTNACC	1 cut(s)	1375
EcoRII	CCWGG	6 cut(s)	232, 259, 306, 941, 1548, 1573
EcoT14I	CCWWGG	2 cut(s)	155, 620
EcoT22I	ATGCAT	1 cut(s)	1110
ErhI	CCWWGG	2 cut(s)	155, 620
FaeI	CATG	7 cut(s)	52, 257, 369, 416, 713, 799, 1742
FaqI	GGGAC	5 cut(s)	134, 430, 553, 569, 634
FatI	CATG	7 cut(s)	48, 253, 365, 412, 709, 795, 1738
FblI	GTMKAC	1 cut(s)	1593
Fnu4HI	GCNGC	5 cut(s)	452, 1280, 1307, 1614, 1651
FokI	GGATG	5 cut(s)	138, 476, 791, 1095, 1493
Fsp4HI	GCNGC	5 cut(s)	452, 1280, 1307, 1614, 1651
FspBI	CTAG	5 cut(s)	117, 210, 327, 588, 1490
GluI	GCNGC	5 cut(s)	452, 1280, 1307, 1614, 1651
GsaI	CCCAGC	1 cut(s)	224
GsuI	CTGGAG	1 cut(s)	866
HaeIII	GGCC	3 cut(s)	251, 612, 1560
HapII	CCGG	6 cut(s)	442, 448, 775, 990, 1380, 1561
Hin1II	CATG	7 cut(s)	52, 257, 369, 416, 713, 799, 1742
HincII	GTYRAC	1 cut(s)	1732
HindII	GTYRAC	1 cut(s)	1732
HindIII	AAGCTT	2 cut(s)	1080, 1420
HpaII	CCGG	6 cut(s)	442, 448, 775, 990, 1380, 1561
HphI	GGTGA	2 cut(s)	236, 1760
Hpy166II	GTNNAC	4 cut(s)	1247, 1594, 1703, 1732
Hpy188I	TCNGA	5 cut(s)	90, 300, 597, 705, 759
Hpy8I	GTNNAC	4 cut(s)	1247, 1594, 1703, 1732
HpyAV	CCTTC	6 cut(s)	574, 602, 940, 1472, 1545, 1651
HpyCH4III	ACNGT	6 cut(s)	513, 648, 1009, 1410, 1729, 1745
HpyCH4IV	ACGT	2 cut(s)	275, 1596
HpyCH4V	TGCA	8 cut(s)	243, 412, 656, 955, 1108, 1653, 1738, 1777
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1158, 1647
HpyF3I	CTNAG	7 cut(s)	87, 97, 688, 786, 1022, 1241, 1400
HpySE526I	ACGT	2 cut(s)	275, 1596
Hsp92II	CATG	7 cut(s)	52, 257, 369, 416, 713, 799, 1742
Kzo9I	GATC	3 cut(s)	336, 415, 925
LguI	GCTCTTC	1 cut(s)	479
LmnI	GCTCC	2 cut(s)	1036, 1463
Lsp1109I	GCAGC	4 cut(s)	463, 1266, 1600, 1637
LweI	GCATC	5 cut(s)	498, 560, 1117, 1429, 1515
MaeI	CTAG	5 cut(s)	117, 210, 327, 588, 1490
MaeII	ACGT	2 cut(s)	275, 1596
MaeIII	GTNAC	4 cut(s)	57, 530, 1375, 1540
MalI	GATC	3 cut(s)	338, 417, 927
MboI	GATC	3 cut(s)	336, 415, 925
MfeI	CAATTG	1 cut(s)	1191
MflI	RGATCY	1 cut(s)	925
MlyI	GAGTC	4 cut(s)	65, 89, 669, 1360
MmeI	TCCRAC	2 cut(s)	82, 1328
MnlI	CCTC	8 cut(s)	184, 391, 681, 695, 816, 904, 1624, 1668
Mph1103I	ATGCAT	1 cut(s)	1110
MroXI	GAANNNNTTC	1 cut(s)	1448
MseI	TTAA	7 cut(s)	198, 464, 734, 833, 1224, 1425, 1643
MslI	CAYNNNNRTG	2 cut(s)	524, 1743
MspA1I	CMGCKG	3 cut(s)	454, 1309, 1436
MspI	CCGG	6 cut(s)	442, 448, 775, 990, 1380, 1561
MunI	CAATTG	1 cut(s)	1191
Mva1269I	GAATGC	2 cut(s)	70, 591
MvaI	CCWGG	6 cut(s)	234, 261, 308, 943, 1550, 1575
MwoI	GCNNNNNNNGC	2 cut(s)	1158, 1647
NciI	CCSGG	4 cut(s)	448, 775, 776, 990
NdeII	GATC	3 cut(s)	336, 415, 925
NheI	GCTAGC	1 cut(s)	209
NlaIII	CATG	7 cut(s)	52, 257, 369, 416, 713, 799, 1742
NlaIV	GGNNCC	6 cut(s)	161, 446, 541, 585, 694, 1459
NmuCI	GTSAC	2 cut(s)	57, 530
NsiI	ATGCAT	1 cut(s)	1110
NspI	RCATGY	1 cut(s)	52
PagI	TCATGA	1 cut(s)	795
PciI	ACATGT	1 cut(s)	48
PciSI	GCTCTTC	1 cut(s)	479
PcsI	WCGNNNNNNNCGW	1 cut(s)	1689
PctI	GAATGC	2 cut(s)	70, 591
PdmI	GAANNNNTTC	1 cut(s)	1448
PfeI	GAWTC	6 cut(s)	706, 971, 1262, 1385, 1482, 1619
PinAI	ACCGGT	1 cut(s)	441
PkrI	GCNGC	5 cut(s)	453, 1281, 1308, 1615, 1652
PleI	GAGTC	4 cut(s)	64, 88, 668, 1359
PpsI	GAGTC	4 cut(s)	64, 88, 668, 1359
PpuMI	RGGWCCY	2 cut(s)	583, 949
PscI	ACATGT	1 cut(s)	48
PsiI	TTATAA	2 cut(s)	287, 900
Psp5II	RGGWCCY	2 cut(s)	583, 949
Psp6I	CCWGG	6 cut(s)	232, 259, 306, 941, 1548, 1573
PspEI	GGTNACC	1 cut(s)	1375
PspFI	CCCAGC	1 cut(s)	220
PspGI	CCWGG	6 cut(s)	232, 259, 306, 941, 1548, 1573
PspN4I	GGNNCC	6 cut(s)	161, 446, 541, 585, 694, 1459
PspPI	GGNCC	6 cut(s)	33, 250, 444, 540, 583, 949
PspPPI	RGGWCCY	2 cut(s)	583, 949
PstI	CTGCAG	1 cut(s)	1655
PsuI	RGATCY	1 cut(s)	925
PvuII	CAGCTG	2 cut(s)	454, 1436
RsaI	GTAC	3 cut(s)	807, 844, 1011
RsaNI	GTAC	3 cut(s)	806, 843, 1010
RseI	CAYNNNNRTG	2 cut(s)	524, 1743
SapI	GCTCTTC	1 cut(s)	479
SaqAI	TTAA	7 cut(s)	198, 464, 734, 833, 1224, 1425, 1643
SatI	GCNGC	5 cut(s)	452, 1280, 1307, 1614, 1651
Sau3AI	GATC	3 cut(s)	336, 415, 925
Sau96I	GGNCC	6 cut(s)	33, 250, 444, 540, 583, 949
SchI	GAGTC	4 cut(s)	65, 89, 669, 1360
SfaNI	GCATC	5 cut(s)	498, 560, 1117, 1429, 1515
SfcI	CTRYAG	5 cut(s)	644, 1413, 1600, 1651, 1796
SinI	GGWCC	5 cut(s)	33, 444, 540, 583, 949
SmaI	CCCGGG	1 cut(s)	776
SmiMI	CAYNNNNRTG	2 cut(s)	524, 1743
SsiI	CCGC	1 cut(s)	1307
SspMI	CTAG	5 cut(s)	117, 210, 327, 588, 1490
StyI	CCWWGG	2 cut(s)	155, 620
TaaI	ACNGT	6 cut(s)	513, 648, 1009, 1410, 1729, 1745
TaiI	ACGT	2 cut(s)	278, 1599
TaqI	TCGA	5 cut(s)	565, 931, 1570, 1683, 1768
TatI	WGTACW	1 cut(s)	805
TauI	GCSGC	1 cut(s)	1309
TfiI	GAWTC	6 cut(s)	706, 971, 1262, 1385, 1482, 1619
Tru1I	TTAA	7 cut(s)	198, 464, 734, 833, 1224, 1425, 1643
Tru9I	TTAA	7 cut(s)	198, 464, 734, 833, 1224, 1425, 1643
TscAI	CASTG	1 cut(s)	1338
TseFI	GTSAC	2 cut(s)	57, 530
TseI	GCWGC	4 cut(s)	451, 1279, 1613, 1650
Tsp45I	GTSAC	2 cut(s)	57, 530
TspDTI	ATGAA	5 cut(s)	188, 621, 906, 1070, 1131
TspGWI	ACGGA	2 cut(s)	76, 396
TspMI	CCCGGG	1 cut(s)	774
TspRI	CASTG	1 cut(s)	1338
VpaK11BI	GGWCC	5 cut(s)	33, 444, 540, 583, 949
XapI	RAATTY	6 cut(s)	91, 141, 847, 1313, 1365, 1390
XceI	RCATGY	1 cut(s)	52
XmaI	CCCGGG	1 cut(s)	774
XmiI	GTMKAC	1 cut(s)	1593
XmnI	GAANNNNTTC	1 cut(s)	1448
XspI	CTAG	5 cut(s)	117, 210, 327, 588, 1490
Zsp2I	ATGCAT	1 cut(s)	1110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.