SNF2 domain-containing protein CLASSY
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G16390 AT2G16390 AT2G21450 AT2G21450 AT2G21450 AT2G21455 |
| fragaria_vesca | FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 FvH4_2g09760 |
| malus_domestica | MD05G1059900.v1.1 MD10G1068100.v1.1 |
| prunus_persica | Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G089900_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 Prupe.8G090000_v2.0.a1 |
| pyrus_communis | pycom05g05130 pycom10g05390 |
| rosa_chinensis | RchiOBHm_Chr6g0266061 RchiOBHm_Chr6g0266081 |
| rosa_laevigata | RLG00000014118 RLG00000014121 |
| rosa_multiflora | Rmu_sc0000776.1_g000029 Rmu_sc0000776.1_g000037 |
| rosa_roxburghii | Rroxscaffold_174G00435180 Rroxscaffold_174G00435190 Rroxscaffold_7G00201990 Rroxscaffold_7G00202000 |
| rosa_rugosa | Rorug06G0023000 Rorug06G0023700 |
| rosa_samantha | Rh6AG144300 Rh6AG144400 Rh6BG144700 Rh6BG144900 Rh6CG141400 Rh6CG141600 Rh6DG129100 Rh6DG129200 |
| rosa_wichuraiana | Rw1G008890 Rw6G012470 Rw6G012480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1463, 2034 |
| Acc65I | GGTACC | 1 cut(s) | 1680 |
| AccB1I | GGYRCC | 1 cut(s) | 1680 |
| AccII | CGCG | 1 cut(s) | 1234 |
| AccIII | TCCGGA | 1 cut(s) | 1557 |
| AciI | CCGC | 5 cut(s) | 1232, 1234, 1413, 1618, 1967 |
| AclWI | GGATC | 3 cut(s) | 549, 1977, 2262 |
| AcsI | RAATTY | 6 cut(s) | 748, 1316, 1746, 2114, 2275, 2300 |
| AcuI | CTGAAG | 3 cut(s) | 1041, 1133, 2505 |
| AcvI | CACGTG | 1 cut(s) | 2626 |
| AfaI | GTAC | 4 cut(s) | 1210, 1682, 1840, 1984 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 118, 1442, 2500 |
| AflIII | ACRYGT | 2 cut(s) | 280, 2739 |
| AgeI | ACCGGT | 1 cut(s) | 593 |
| AgsI | TTSAA | 9 cut(s) | 309, 496, 676, 1633, 1823, 2100, 2120, 2128, 2764 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1618 |
| AjiI | CACGTC | 2 cut(s) | 2546, 2581 |
| AjnI | CCWGG | 6 cut(s) | 487, 1408, 1435, 1487, 2059, 2557 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 230, 262, 386, 418, 1249, 1281 |
| AleI | CACNNNNGTG | 1 cut(s) | 1220 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 792, 824 |
| Alw21I | GWGCWC | 4 cut(s) | 437, 2025, 2580, 2631 |
| Alw26I | GTCTC | 5 cut(s) | 705, 1395, 1626, 2176, 2426 |
| Alw44I | GTGCAC | 1 cut(s) | 2576 |
| AlwI | GGATC | 3 cut(s) | 549, 1977, 2262 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 173 |
| Ama87I | CYCGRG | 1 cut(s) | 1951 |
| Aor13HI | TCCGGA | 1 cut(s) | 1557 |
| AoxI | GGCC | 1 cut(s) | 2089 |
| ApaLI | GTGCAC | 1 cut(s) | 2576 |
| ApeKI | GCWGC | 5 cut(s) | 167, 320, 578, 2229, 2597 |
| ApoI | RAATTY | 6 cut(s) | 748, 1316, 1746, 2114, 2275, 2300 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2535, 2567 |
| AsiGI | ACCGGT | 1 cut(s) | 593 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1553 |
| Asp718I | GGTACC | 1 cut(s) | 1680 |
| AspS9I | GGNCC | 1 cut(s) | 329 |
| AsuC2I | CCSGG | 2 cut(s) | 1952, 1953 |
| AsuHPI | GGTGA | 4 cut(s) | 53, 2051, 2598, 2747 |
| AvaI | CYCGRG | 1 cut(s) | 1951 |
| AvaII | GGWCC | 1 cut(s) | 329 |
| BaeGI | GKGCMC | 1 cut(s) | 2580 |
| BanI | GGYRCC | 1 cut(s) | 1680 |
| BanII | GRGCYC | 1 cut(s) | 437 |
| BauI | CACGAG | 1 cut(s) | 2487 |
| BbrPI | CACGTG | 1 cut(s) | 2626 |
| BbsI | GAAGAC | 5 cut(s) | 207, 369, 1760, 1892, 2717 |
| Bbv12I | GWGCWC | 4 cut(s) | 437, 2025, 2580, 2631 |
| BbvI | GCAGC | 5 cut(s) | 179, 332, 590, 2216, 2584 |
| BccI | CCATC | 9 cut(s) | 120, 185, 340, 701, 1059, 1078, 2221, 2245, 2279 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 778, 812 |
| BciT130I | CCWGG | 6 cut(s) | 489, 1410, 1437, 1489, 2061, 2559 |
| BciVI | GTATCC | 3 cut(s) | 153, 243, 1531 |
| BclI | TGATCA | 3 cut(s) | 274, 739, 1096 |
| BcnI | CCSGG | 2 cut(s) | 1952, 1953 |
| BcoDI | GTCTC | 5 cut(s) | 705, 1395, 1626, 2176, 2426 |
| BfaI | CTAG | 7 cut(s) | 8, 164, 599, 806, 1074, 1503, 1764 |
| BfmI | CTRYAG | 4 cut(s) | 264, 1751, 2584, 2715 |
| BfuI | GTATCC | 3 cut(s) | 153, 243, 1531 |
| BglII | AGATCT | 3 cut(s) | 988, 1913, 2719 |
| BisI | GCNGC | 6 cut(s) | 168, 321, 579, 1232, 2230, 2598 |
| BlsI | GCNGC | 6 cut(s) | 169, 322, 580, 1233, 2231, 2599 |
| Bme1390I | CCNGG | 8 cut(s) | 489, 1410, 1437, 1489, 1952, 1953, 2061, 2559 |
| Bme18I | GGWCC | 1 cut(s) | 329 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1618 |
| BmeT110I | CYCGRG | 1 cut(s) | 1951 |
| BmgBI | CACGTC | 2 cut(s) | 2546, 2581 |
| BmgT120I | GGNCC | 1 cut(s) | 329 |
| BmiI | GGNNCC | 6 cut(s) | 96, 219, 252, 408, 1682, 2165 |
| BmrFI | CCNGG | 8 cut(s) | 489, 1410, 1437, 1489, 1952, 1953, 2061, 2559 |
| BmrI | ACTGGG | 1 cut(s) | 1302 |
| BmsI | GCATC | 8 cut(s) | 85, 495, 955, 988, 1228, 1674, 2188, 2475 |
| BmuI | ACTGGG | 1 cut(s) | 1302 |
| BpiI | GAAGAC | 5 cut(s) | 207, 369, 1760, 1892, 2717 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1253, 1285 |
| BpmI | CTGGAG | 1 cut(s) | 87 |
| BpuMI | CCSGG | 2 cut(s) | 1952, 1953 |
| Bsa29I | ATCGAT | 1 cut(s) | 2257 |
| BsaAI | YACGTR | 1 cut(s) | 2626 |
| BsaI | GGTCTC | 1 cut(s) | 1626 |
| BsaJI | CCNNGG | 8 cut(s) | 1035, 1232, 1408, 1435, 1605, 1796, 1951, 2060 |
| BsaWI | WCCGGW | 2 cut(s) | 593, 1557 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 125, 155 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 118, 1442, 2500 |
| Bse118I | RCCGGY | 1 cut(s) | 593 |
| Bse1I | ACTGG | 3 cut(s) | 1186, 1297, 2355 |
| BseAI | TCCGGA | 1 cut(s) | 1557 |
| BseBI | CCWGG | 6 cut(s) | 489, 1410, 1437, 1489, 2061, 2559 |
| BseCI | ATCGAT | 1 cut(s) | 2257 |
| BseDI | CCNNGG | 8 cut(s) | 1035, 1232, 1408, 1435, 1605, 1796, 1951, 2060 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 118, 1442, 2500 |
| BseMII | CTCAG | 5 cut(s) | 1251, 1879, 2211, 2439, 2667 |
| BseNI | ACTGG | 3 cut(s) | 1186, 1297, 2355 |
| BseRI | GAGGAG | 5 cut(s) | 73, 90, 246, 249, 2627 |
| BseSI | GKGCMC | 1 cut(s) | 2580 |
| BseXI | GCAGC | 5 cut(s) | 179, 332, 590, 2216, 2584 |
| BseYI | CCCAGC | 1 cut(s) | 830 |
| BsgI | GTGCAG | 2 cut(s) | 597, 2215 |
| Bsh1236I | CGCG | 1 cut(s) | 1234 |
| BshFI | GGCC | 1 cut(s) | 2091 |
| BshNI | GGYRCC | 1 cut(s) | 1680 |
| BshTI | ACCGGT | 1 cut(s) | 593 |
| BshVI | ATCGAT | 1 cut(s) | 2257 |
| BsiHKAI | GWGCWC | 4 cut(s) | 437, 2025, 2580, 2631 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1951 |
| BsiSI | CCGG | 3 cut(s) | 594, 1558, 1952 |
| BslFI | GGGAC | 1 cut(s) | 1744 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 118, 1442, 2500 |
| BsmAI | GTCTC | 5 cut(s) | 705, 1395, 1626, 2176, 2426 |
| BsmFI | GGGAC | 1 cut(s) | 1744 |
| BsmI | GAATGC | 3 cut(s) | 463, 1419, 2157 |
| BsnI | GGCC | 1 cut(s) | 2091 |
| Bso31I | GGTCTC | 1 cut(s) | 1626 |
| BsoBI | CYCGRG | 1 cut(s) | 1951 |
| Bsp1286I | GDGCHC | 4 cut(s) | 437, 2025, 2580, 2631 |
| Bsp13I | TCCGGA | 1 cut(s) | 1557 |
| BspACI | CCGC | 5 cut(s) | 1232, 1234, 1413, 1618, 1967 |
| BspANI | GGCC | 1 cut(s) | 2091 |
| BspCNI | CTCAG | 5 cut(s) | 1252, 1878, 2212, 2440, 2668 |
| BspDI | ATCGAT | 1 cut(s) | 2257 |
| BspEI | TCCGGA | 1 cut(s) | 1557 |
| BspFNI | CGCG | 1 cut(s) | 1234 |
| BspHI | TCATGA | 3 cut(s) | 388, 811, 1972 |
| BspLI | GGNNCC | 6 cut(s) | 96, 219, 252, 408, 1682, 2165 |
| BspMAI | CTGCAG | 1 cut(s) | 1755 |
| BspPI | GGATC | 3 cut(s) | 549, 1977, 2262 |
| BspQI | GCTCTTC | 2 cut(s) | 425, 1655 |
| BspT107I | GGYRCC | 1 cut(s) | 1680 |
| BspTNI | GGTCTC | 1 cut(s) | 1626 |
| BsrFI | RCCGGY | 1 cut(s) | 593 |
| BsrI | ACTGG | 3 cut(s) | 1186, 1297, 2355 |
| BssAI | RCCGGY | 1 cut(s) | 593 |
| BssECI | CCNNGG | 8 cut(s) | 1035, 1232, 1408, 1435, 1605, 1796, 1951, 2060 |
| BssSI | CACGAG | 1 cut(s) | 2487 |
| BssT1I | CCWWGG | 3 cut(s) | 1035, 1605, 1796 |
| Bst2BI | CACGAG | 1 cut(s) | 2487 |
| Bst2UI | CCWGG | 6 cut(s) | 489, 1410, 1437, 1489, 2061, 2559 |
| Bst4CI | ACNGT | 6 cut(s) | 527, 1629, 1689, 2008, 2236, 2716 |
| Bst6I | CTCTTC | 3 cut(s) | 425, 663, 1655 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 173 |
| BstBAI | YACGTR | 1 cut(s) | 2626 |
| BstC8I | GCNNGC | 3 cut(s) | 652, 2319, 2535 |
| BstDSI | CCRYGG | 1 cut(s) | 1232 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1440 |
| BstFNI | CGCG | 1 cut(s) | 1234 |
| BstMAI | GTCTC | 5 cut(s) | 705, 1395, 1626, 2176, 2426 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 167, 173, 1231, 1713 |
| BstNI | CCWGG | 6 cut(s) | 489, 1410, 1437, 1489, 2061, 2559 |
| BstNSI | RCATGY | 1 cut(s) | 2743 |
| BstSCI | CCNGG | 8 cut(s) | 487, 1408, 1435, 1487, 1950, 1951, 2059, 2557 |
| BstSFI | CTRYAG | 4 cut(s) | 264, 1751, 2584, 2715 |
| BstSLI | GKGCMC | 1 cut(s) | 2580 |
| BstUI | CGCG | 1 cut(s) | 1234 |
| BstV1I | GCAGC | 5 cut(s) | 179, 332, 590, 2216, 2584 |
| BstV2I | GAAGAC | 5 cut(s) | 207, 369, 1760, 1892, 2717 |
| BstX2I | RGATCY | 3 cut(s) | 988, 1913, 2719 |
| BstYI | RGATCY | 3 cut(s) | 988, 1913, 2719 |
| Bsu15I | ATCGAT | 1 cut(s) | 2257 |
| BsuI | GTATCC | 3 cut(s) | 153, 243, 1531 |
| BsuRI | GGCC | 1 cut(s) | 2091 |
| BsuTUI | ATCGAT | 1 cut(s) | 2257 |
| BtgI | CCRYGG | 1 cut(s) | 1232 |
| BtrI | CACGTC | 2 cut(s) | 2546, 2581 |
| BtsIMutI | CAGTG | 2 cut(s) | 742, 1848 |
| Cac8I | GCNNGC | 3 cut(s) | 652, 2319, 2535 |
| CaiI | CAGNNNCTG | 1 cut(s) | 173 |
| CciI | TCATGA | 3 cut(s) | 388, 811, 1972 |
| Cfr10I | RCCGGY | 1 cut(s) | 593 |
| Cfr13I | GGNCC | 1 cut(s) | 329 |
| Cfr42I | CCGCGG | 1 cut(s) | 1235 |
| Cfr9I | CCCGGG | 1 cut(s) | 1951 |
| ClaI | ATCGAT | 1 cut(s) | 2257 |
| CsiI | ACCWGGT | 1 cut(s) | 2557 |
| Csp6I | GTAC | 4 cut(s) | 1209, 1681, 1839, 1983 |
| CspAI | ACCGGT | 1 cut(s) | 593 |
| CviQI | GTAC | 4 cut(s) | 1209, 1681, 1839, 1983 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1618 |
| Eam1104I | CTCTTC | 3 cut(s) | 425, 663, 1655 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1618 |
| EarI | CTCTTC | 3 cut(s) | 425, 663, 1655 |
| Ecl136II | GAGCTC | 1 cut(s) | 435 |
| Eco130I | CCWWGG | 3 cut(s) | 1035, 1605, 1796 |
| Eco24I | GRGCYC | 1 cut(s) | 437 |
| Eco31I | GGTCTC | 1 cut(s) | 1626 |
| Eco32I | GATATC | 3 cut(s) | 1990, 2195, 2652 |
| Eco47I | GGWCC | 1 cut(s) | 329 |
| Eco53kI | GAGCTC | 1 cut(s) | 435 |
| Eco57I | CTGAAG | 3 cut(s) | 1041, 1133, 2505 |
| Eco72I | CACGTG | 1 cut(s) | 2626 |
| Eco88I | CYCGRG | 1 cut(s) | 1951 |
| EcoICRI | GAGCTC | 1 cut(s) | 435 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1440 |
| EcoRI | GAATTC | 1 cut(s) | 748 |
| EcoRII | CCWGG | 6 cut(s) | 487, 1408, 1435, 1487, 2059, 2557 |
| EcoRV | GATATC | 3 cut(s) | 1990, 2195, 2652 |
| EcoT14I | CCWWGG | 3 cut(s) | 1035, 1605, 1796 |
| EcoT22I | ATGCAT | 3 cut(s) | 510, 1003, 2181 |
| EcoT38I | GRGCYC | 1 cut(s) | 437 |
| ErhI | CCWWGG | 3 cut(s) | 1035, 1605, 1796 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 386, 418 |
| FaqI | GGGAC | 1 cut(s) | 1744 |
| FauI | CCCGC | 1 cut(s) | 1227 |
| FbaI | TGATCA | 3 cut(s) | 274, 739, 1096 |
| Fnu4HI | GCNGC | 6 cut(s) | 168, 321, 579, 1232, 2230, 2598 |
| FriOI | GRGCYC | 1 cut(s) | 437 |
| Fsp4HI | GCNGC | 6 cut(s) | 168, 321, 579, 1232, 2230, 2598 |
| FspBI | CTAG | 7 cut(s) | 8, 164, 599, 806, 1074, 1503, 1764 |
| GluI | GCNGC | 6 cut(s) | 168, 321, 579, 1232, 2230, 2598 |
| GsaI | CCCAGC | 1 cut(s) | 834 |
| GsuI | CTGGAG | 1 cut(s) | 87 |
| HaeIII | GGCC | 1 cut(s) | 2091 |
| HapII | CCGG | 3 cut(s) | 594, 1558, 1952 |
| HincII | GTYRAC | 1 cut(s) | 2445 |
| HindII | GTYRAC | 1 cut(s) | 2445 |
| HindIII | AAGCTT | 1 cut(s) | 1283 |
| HinfI | GANTC | 6 cut(s) | 1278, 2259, 2330, 2419, 2603, 2729 |
| HpaI | GTTAAC | 1 cut(s) | 2445 |
| HpaII | CCGG | 3 cut(s) | 594, 1558, 1952 |
| HphI | GGTGA | 4 cut(s) | 53, 2051, 2598, 2747 |
| Hpy166II | GTNNAC | 6 cut(s) | 1211, 2076, 2445, 2578, 2673, 2687 |
| Hpy8I | GTNNAC | 6 cut(s) | 1211, 2076, 2445, 2578, 2673, 2687 |
| HpyCH4III | ACNGT | 6 cut(s) | 527, 1629, 1689, 2008, 2236, 2716 |
| HpyCH4IV | ACGT | 5 cut(s) | 280, 516, 2545, 2580, 2625 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 167, 173, 1231, 1713 |
| HpySE526I | ACGT | 5 cut(s) | 280, 516, 2545, 2580, 2625 |
| Kpn2I | TCCGGA | 1 cut(s) | 1557 |
| KpnI | GGTACC | 1 cut(s) | 1684 |
| Ksp22I | TGATCA | 3 cut(s) | 274, 739, 1096 |
| KspAI | GTTAAC | 1 cut(s) | 2445 |
| KspI | CCGCGG | 1 cut(s) | 1235 |
| LguI | GCTCTTC | 2 cut(s) | 425, 1655 |
| LmnI | GCTCC | 8 cut(s) | 175, 217, 250, 406, 787, 2028, 2163, 2480 |
| Lsp1109I | GCAGC | 5 cut(s) | 179, 332, 590, 2216, 2584 |
| LweI | GCATC | 8 cut(s) | 85, 495, 955, 988, 1228, 1674, 2188, 2475 |
| MabI | ACCWGGT | 1 cut(s) | 2557 |
| MaeI | CTAG | 7 cut(s) | 8, 164, 599, 806, 1074, 1503, 1764 |
| MaeII | ACGT | 5 cut(s) | 280, 516, 2545, 2580, 2625 |
| MaeIII | GTNAC | 7 cut(s) | 589, 614, 1478, 1787, 2039, 2524, 2735 |
| MflI | RGATCY | 3 cut(s) | 988, 1913, 2719 |
| MhlI | GDGCHC | 4 cut(s) | 437, 2025, 2580, 2631 |
| MlyI | GAGTC | 3 cut(s) | 2428, 2597, 2723 |
| MmeI | TCCRAC | 3 cut(s) | 456, 778, 2396 |
| Mph1103I | ATGCAT | 3 cut(s) | 510, 1003, 2181 |
| MroI | TCCGGA | 1 cut(s) | 1557 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1553 |
| MseI | TTAA | 9 cut(s) | 425, 1304, 1374, 1640, 2010, 2144, 2273, 2310, 2444 |
| MslI | CAYNNNNRTG | 6 cut(s) | 128, 290, 621, 816, 1027, 1220 |
| MspA1I | CMGCKG | 2 cut(s) | 1061, 1234 |
| MspI | CCGG | 3 cut(s) | 594, 1558, 1952 |
| MspR9I | CCNGG | 8 cut(s) | 489, 1410, 1437, 1489, 1952, 1953, 2061, 2559 |
| Mva1269I | GAATGC | 3 cut(s) | 463, 1419, 2157 |
| MvaI | CCWGG | 6 cut(s) | 489, 1410, 1437, 1489, 2061, 2559 |
| MvnI | CGCG | 1 cut(s) | 1234 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 167, 173, 1231, 1713 |
| NciI | CCSGG | 2 cut(s) | 1952, 1953 |
| NlaIV | GGNNCC | 6 cut(s) | 96, 219, 252, 408, 1682, 2165 |
| NmeAIII | GCCGAG | 3 cut(s) | 1766, 2067, 2509 |
| NmuCI | GTSAC | 5 cut(s) | 589, 614, 1787, 2039, 2735 |
| NsiI | ATGCAT | 3 cut(s) | 510, 1003, 2181 |
| NspI | RCATGY | 1 cut(s) | 2743 |
| OliI | CACNNNNGTG | 1 cut(s) | 1220 |
| PagI | TCATGA | 3 cut(s) | 388, 811, 1972 |
| PciI | ACATGT | 1 cut(s) | 2739 |
| PciSI | GCTCTTC | 2 cut(s) | 425, 1655 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2551 |
| PctI | GAATGC | 3 cut(s) | 463, 1419, 2157 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1553 |
| PfeI | GAWTC | 3 cut(s) | 1278, 2259, 2330 |
| PflFI | GACNNNGTC | 1 cut(s) | 2559 |
| PinAI | ACCGGT | 1 cut(s) | 593 |
| PkrI | GCNGC | 6 cut(s) | 169, 322, 580, 1233, 2231, 2599 |
| PleI | GAGTC | 3 cut(s) | 2427, 2597, 2723 |
| PmaCI | CACGTG | 1 cut(s) | 2626 |
| PmlI | CACGTG | 1 cut(s) | 2626 |
| PpsI | GAGTC | 3 cut(s) | 2427, 2597, 2723 |
| Ppu21I | YACGTR | 1 cut(s) | 2626 |
| PscI | ACATGT | 1 cut(s) | 2739 |
| PsiI | TTATAA | 2 cut(s) | 1463, 2034 |
| Psp124BI | GAGCTC | 1 cut(s) | 437 |
| Psp6I | CCWGG | 6 cut(s) | 487, 1408, 1435, 1487, 2059, 2557 |
| PspCI | CACGTG | 1 cut(s) | 2626 |
| PspFI | CCCAGC | 1 cut(s) | 830 |
| PspGI | CCWGG | 6 cut(s) | 487, 1408, 1435, 1487, 2059, 2557 |
| PspN4I | GGNNCC | 6 cut(s) | 96, 219, 252, 408, 1682, 2165 |
| PspPI | GGNCC | 1 cut(s) | 329 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1673, 1705 |
| PstI | CTGCAG | 1 cut(s) | 1755 |
| PstNI | CAGNNNCTG | 1 cut(s) | 173 |
| PsuI | RGATCY | 3 cut(s) | 988, 1913, 2719 |
| PsyI | GACNNNGTC | 1 cut(s) | 2559 |
| PvuII | CAGCTG | 1 cut(s) | 1061 |
| RsaI | GTAC | 4 cut(s) | 1210, 1682, 1840, 1984 |
| RsaNI | GTAC | 4 cut(s) | 1209, 1681, 1839, 1983 |
| RseI | CAYNNNNRTG | 6 cut(s) | 128, 290, 621, 816, 1027, 1220 |
| SacI | GAGCTC | 1 cut(s) | 437 |
| SacII | CCGCGG | 1 cut(s) | 1235 |
| SapI | GCTCTTC | 2 cut(s) | 425, 1655 |
| SaqAI | TTAA | 9 cut(s) | 425, 1304, 1374, 1640, 2010, 2144, 2273, 2310, 2444 |
| SatI | GCNGC | 6 cut(s) | 168, 321, 579, 1232, 2230, 2598 |
| Sau96I | GGNCC | 1 cut(s) | 329 |
| SchI | GAGTC | 3 cut(s) | 2428, 2597, 2723 |
| ScrFI | CCNGG | 8 cut(s) | 489, 1410, 1437, 1489, 1952, 1953, 2061, 2559 |
| SduI | GDGCHC | 4 cut(s) | 437, 2025, 2580, 2631 |
| SexAI | ACCWGGT | 1 cut(s) | 2557 |
| SfaNI | GCATC | 8 cut(s) | 85, 495, 955, 988, 1228, 1674, 2188, 2475 |
| SfcI | CTRYAG | 4 cut(s) | 264, 1751, 2584, 2715 |
| Sfr303I | CCGCGG | 1 cut(s) | 1235 |
| SgrBI | CCGCGG | 1 cut(s) | 1235 |
| SinI | GGWCC | 1 cut(s) | 329 |
| SmaI | CCCGGG | 1 cut(s) | 1953 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 128, 290, 621, 816, 1027, 1220 |
| SsiI | CCGC | 5 cut(s) | 1232, 1234, 1413, 1618, 1967 |
| SspI | AATATT | 1 cut(s) | 316 |
| SspMI | CTAG | 7 cut(s) | 8, 164, 599, 806, 1074, 1503, 1764 |
| SstI | GAGCTC | 1 cut(s) | 437 |
| StyD4I | CCNGG | 8 cut(s) | 487, 1408, 1435, 1487, 1950, 1951, 2059, 2557 |
| StyI | CCWWGG | 3 cut(s) | 1035, 1605, 1796 |
| TaaI | ACNGT | 6 cut(s) | 527, 1629, 1689, 2008, 2236, 2716 |
| TaiI | ACGT | 5 cut(s) | 283, 519, 2548, 2583, 2628 |
| TaqI | TCGA | 4 cut(s) | 68, 2257, 2554, 2667 |
| TatI | WGTACW | 3 cut(s) | 1208, 1838, 1982 |
| TauI | GCSGC | 1 cut(s) | 1234 |
| TfiI | GAWTC | 3 cut(s) | 1278, 2259, 2330 |
| Tru1I | TTAA | 9 cut(s) | 425, 1304, 1374, 1640, 2010, 2144, 2273, 2310, 2444 |
| Tru9I | TTAA | 9 cut(s) | 425, 1304, 1374, 1640, 2010, 2144, 2273, 2310, 2444 |
| TscAI | CASTG | 2 cut(s) | 742, 1855 |
| TseFI | GTSAC | 5 cut(s) | 589, 614, 1787, 2039, 2735 |
| TseI | GCWGC | 5 cut(s) | 167, 320, 578, 2229, 2597 |
| Tsp45I | GTSAC | 5 cut(s) | 589, 614, 1787, 2039, 2735 |
| TspMI | CCCGGG | 1 cut(s) | 1951 |
| TspRI | CASTG | 2 cut(s) | 742, 1855 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2559 |
| VneI | GTGCAC | 1 cut(s) | 2576 |
| VpaK11BI | GGWCC | 1 cut(s) | 329 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1440 |
| XapI | RAATTY | 6 cut(s) | 748, 1316, 1746, 2114, 2275, 2300 |
| XbaI | TCTAGA | 1 cut(s) | 598 |
| XceI | RCATGY | 1 cut(s) | 2743 |
| XmaI | CCCGGG | 1 cut(s) | 1951 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1553 |
| XspI | CTAG | 7 cut(s) | 8, 164, 599, 806, 1074, 1503, 1764 |
| Zsp2I | ATGCAT | 3 cut(s) | 510, 1003, 2181 |