Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002337

Physical Location & Seq

Genomic Coordinates Reverse (-)

10034484 .. 10036048

Gene Structure 1565 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G23590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 819 bp

ATGTATGAAAACGGGATAAGCTTTATAATCTCTTTACTTATATGTGGATGTGTGAAGAGTGAGGAGATGATGAAGCAACATTTCGTGCTAGTACATGGTTCGTGCCTCGGCGCGTGGTGCTGGTACAAGGTGAAGCCGCTGCTCGAGGCTTCGGGCCATCGTGTAACCGCCTTAGACCTAGCTGCTTGTGGTATAGACACAAGGTCGATCACTGACATTTCCACATGCGAACAATATTCTGAGCCGTTGATTCAGCTAATGACTTCATTGCCGAATGATGAGAAGGTTGTGCTCGTGGGTCATAGCTATGGAGGTTTGACTTTAGCCATAGCCATGGATAAGTTTCCCGACAAAATCTCTGTCTCTGTCTTCGTAACTTCTTTCATGCCCGACACCAAAAACTCACCATCGTTCGTCCTGGAAAAGTTTGCAAGCACCATGACACCAGAAGATTGGATGGGCTCTGAGCTCGAGCCGTATGTGGTCTTCAGCGCTGAGTTCACGAAGCACCGTATCCTCCAACTTTCTCCTATTGAAGATCTTGAGCTTAGATTGCTTCTAAAGAGGCCTGGTTCATTATTTCTTAATGATTTATCGAGGATGAAGAACTTTTCTGAAAAAGGGTATGGATCTGTTCCTCGAGCTTACATTGTGAGCAAAGATGACCACACCATCTCGGAAGAATATCAACGATGGATGATCGATAACTATCCGCCGAATTTAGTGATAGAGATGGAAGGGACGGATCATTTGCCATTGTTTTGCAAACCTCAACTACTAAGTGACCATCTATTGGCAATCGCCGACAAATTCTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0006082 GO:0006725 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009056 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009627 GO:0009696 GO:0009814 GO:0009817 GO:0009987 GO:0010817 GO:0016137 GO:0016139 GO:0016787 GO:0016788 GO:0016829 GO:0016830 GO:0016832 GO:0016999 GO:0017144 GO:0018958 GO:0019752 GO:0032787 GO:0042445 GO:0042537 GO:0043207 GO:0043436 GO:0044237 GO:0044281 GO:0045087 GO:0046593 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0052689 GO:0065007 GO:0065008 GO:0071704 GO:0080030 GO:0080031 GO:0080032 GO:0098542 GO:1901135 GO:1901136 GO:1901360 GO:1901575 GO:1901615 GO:1901657 GO:1901658

KEGG Pathways

Metabolic & Signaling

ko00460 ko01110 map00460 map01110

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6

Protein Analysis

272

Amino Acids

30.69

Weight (kDa)

5.18

Isoelectric Point (pI)

38.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hydrolase_4	PF12146	25 - 149	2.5e-06	Serine aminopeptidase, S33
Abhydrolase_1	PF00561	27 - 135	5.7e-17	alpha/beta hydrolase fold
Abhydrolase_6	PF12697	28 - 254	2.5e-22	Alpha/beta hydrolase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23590 AT2G23600 AT2G23600 AT2G23600 AT2G23610 AT2G23610 AT2G23620
fragaria_vesca	FvH4_1g14820
malus_domestica	MD02G1161400.v1.1 MD02G1161600.v1.1 MD15G1275500.v1.1 MD15G1275800.v1.1
prunus_persica	Prupe.7G142100_v2.0.a1 Prupe.7G142200_v2.0.a1 Prupe.7G142200_v2.0.a1
pyrus_communis	pycom02g12750 pycom15g23850 pycom15g23860
rosa_chinensis	RchiOBHm_Chr1g0329881 RchiOBHm_Chr2g0103791
rosa_laevigata	RLG00000017260 RLG00000017263 RLG00000029860
rosa_multiflora	Rmu_sc0000112.1_g000011 Rmu_sc0000112.1_g000026 Rmu_sc0002081.1_g000001
rosa_roxburghii	Rroxscaffold_2G00139360 Rroxscaffold_2G00139380 Rroxscaffold_4G00320540 Rroxscaffold_7G00215680
rosa_rugosa	Rorug01G0084000 Rorug02G0117300
rosa_samantha	Rh1AG101900 Rh1BG081100 Rh1CG097400 Rh1DG105000 Rh2AG166300 Rh2BG173500 Rh2CG172200 Rh2DG171700
rosa_wichuraiana	Rw1G008060 Rw1G008110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	26
AccB7I	CCANNNNNTGG	1 cut(s)	793
AccII	CGCG	1 cut(s)	113
AciI	CCGC	3 cut(s)	137, 168, 713
AclWI	GGATC	2 cut(s)	637, 753
AcsI	RAATTY	2 cut(s)	718, 809
AcuI	CTGAAG	1 cut(s)	472
AfaI	GTAC	2 cut(s)	93, 125
AfeI	AGCGCT	1 cut(s)	493
AfiI	CCNNNNNNNGG	1 cut(s)	793
AgsI	TTSAA	1 cut(s)	536
AhdI	GACNNNNNGTC	1 cut(s)	202
AjnI	CCWGG	2 cut(s)	417, 568
AluBI	AGCT	7 cut(s)	21, 182, 256, 306, 469, 547, 644
AluI	AGCT	7 cut(s)	21, 182, 256, 306, 469, 547, 644
Alw21I	GWGCWC	2 cut(s)	294, 471
Alw26I	GTCTC	1 cut(s)	367
AlwI	GGATC	2 cut(s)	637, 753
Ama87I	CYCGRG	3 cut(s)	143, 470, 639
Aor51HI	AGCGCT	1 cut(s)	493
AoxI	GGCC	2 cut(s)	154, 566
ApeKI	GCWGC	2 cut(s)	139, 182
ApoI	RAATTY	2 cut(s)	718, 809
ArsI	GACNNNNNNTTYG	4 cut(s)	345, 377, 733, 765
AspLEI	GCGC	2 cut(s)	113, 494
AspS9I	GGNCC	1 cut(s)	154
AsuHPI	GGTGA	2 cut(s)	142, 396
AvaI	CYCGRG	3 cut(s)	143, 470, 639
BanII	GRGCYC	2 cut(s)	464, 471
BarI	GAAGNNNNNNTAC	2 cut(s)	470, 502
BauI	CACGAG	1 cut(s)	293
BbsI	GAAGAC	2 cut(s)	361, 478
Bbv12I	GWGCWC	2 cut(s)	294, 471
BbvI	GCAGC	2 cut(s)	126, 169
BccI	CCATC	7 cut(s)	165, 415, 451, 680, 687, 727, 795
BceAI	ACGGC	2 cut(s)	229, 460
BciT130I	CCWGG	2 cut(s)	419, 570
BciVI	GTATCC	1 cut(s)	524
BcoDI	GTCTC	1 cut(s)	367
BfaI	CTAG	2 cut(s)	89, 179
BfoI	RGCGCY	1 cut(s)	495
BfuI	GTATCC	1 cut(s)	524
BglII	AGATCT	1 cut(s)	538
BisI	GCNGC	3 cut(s)	137, 140, 183
BlsI	GCNGC	3 cut(s)	138, 141, 184
Bme1390I	CCNGG	2 cut(s)	419, 570
BmeRI	GACNNNNNGTC	1 cut(s)	202
BmeT110I	CYCGRG	3 cut(s)	143, 470, 639
BmgT120I	GGNCC	1 cut(s)	154
BmrFI	CCNGG	2 cut(s)	419, 570
BpiI	GAAGAC	2 cut(s)	361, 478
BpuEI	CTTGAG	1 cut(s)	563
Bsa29I	ATCGAT	1 cut(s)	702
BsaBI	GATNNNNATC	1 cut(s)	708
BsaJI	CCNNGG	2 cut(s)	106, 333
Bsc4I	CCNNNNNNNGG	1 cut(s)	793
Bse3DI	GCAATG	1 cut(s)	266
Bse8I	GATNNNNATC	1 cut(s)	708
BseBI	CCWGG	2 cut(s)	419, 570
BseCI	ATCGAT	1 cut(s)	702
BseDI	CCNNGG	2 cut(s)	106, 333
BseGI	GGATG	4 cut(s)	53, 462, 606, 702
BseJI	GATNNNNATC	1 cut(s)	708
BseLI	CCNNNNNNNGG	1 cut(s)	793
BseMI	GCAATG	1 cut(s)	266
BseMII	CTCAG	3 cut(s)	231, 456, 486
BseRI	GAGGAG	1 cut(s)	77
BseXI	GCAGC	2 cut(s)	126, 169
Bsh1236I	CGCG	1 cut(s)	113
BshFI	GGCC	2 cut(s)	156, 568
BshVI	ATCGAT	1 cut(s)	702
BsiHKAI	GWGCWC	2 cut(s)	294, 471
BsiHKCI	CYCGRG	3 cut(s)	143, 470, 639
BslFI	GGGAC	1 cut(s)	754
BslI	CCNNNNNNNGG	1 cut(s)	793
BsmAI	GTCTC	1 cut(s)	367
BsmFI	GGGAC	1 cut(s)	754
BsnI	GGCC	2 cut(s)	156, 568
BsoBI	CYCGRG	3 cut(s)	143, 470, 639
Bsp1286I	GDGCHC	3 cut(s)	294, 464, 471
Bsp143I	GATC	5 cut(s)	207, 538, 629, 699, 745
Bsp19I	CCATGG	1 cut(s)	333
BspACI	CCGC	3 cut(s)	137, 168, 713
BspANI	GGCC	2 cut(s)	156, 568
BspCNI	CTCAG	3 cut(s)	232, 457, 487
BspDI	ATCGAT	1 cut(s)	702
BspFNI	CGCG	1 cut(s)	113
BspPI	GGATC	2 cut(s)	637, 753
BsrDI	GCAATG	1 cut(s)	266
BssECI	CCNNGG	2 cut(s)	106, 333
BssMI	GATC	5 cut(s)	207, 538, 629, 699, 745
BssSI	CACGAG	1 cut(s)	293
BssT1I	CCWWGG	1 cut(s)	333
Bst2BI	CACGAG	1 cut(s)	293
Bst2UI	CCWGG	2 cut(s)	419, 570
Bst4CI	ACNGT	1 cut(s)	512
Bst6I	CTCTTC	1 cut(s)	50
BstC8I	GCNNGC	1 cut(s)	433
BstDEI	CTNAG	6 cut(s)	172, 240, 465, 495, 548, 779
BstDSI	CCRYGG	1 cut(s)	333
BstF5I	GGATG	4 cut(s)	53, 462, 606, 702
BstFNI	CGCG	1 cut(s)	113
BstH2I	RGCGCY	1 cut(s)	495
BstHHI	GCGC	2 cut(s)	113, 494
BstKTI	GATC	5 cut(s)	210, 541, 632, 702, 748
BstMAI	GTCTC	1 cut(s)	367
BstMBI	GATC	5 cut(s)	207, 538, 629, 699, 745
BstMWI	GCNNNNNNNGC	2 cut(s)	117, 553
BstNI	CCWGG	2 cut(s)	419, 570
BstNSI	RCATGY	1 cut(s)	228
BstSCI	CCNGG	2 cut(s)	417, 568
BstUI	CGCG	1 cut(s)	113
BstV1I	GCAGC	2 cut(s)	126, 169
BstV2I	GAAGAC	2 cut(s)	361, 478
BstX2I	RGATCY	2 cut(s)	538, 629
BstXI	CCANNNNNNTGG	2 cut(s)	334, 453
BstYI	RGATCY	2 cut(s)	538, 629
Bsu15I	ATCGAT	1 cut(s)	702
BsuI	GTATCC	1 cut(s)	524
BsuRI	GGCC	2 cut(s)	156, 568
BsuTUI	ATCGAT	1 cut(s)	702
BtgI	CCRYGG	1 cut(s)	333
BtsCI	GGATG	4 cut(s)	53, 462, 606, 702
BtsIMutI	CAGTG	1 cut(s)	210
Cac8I	GCNNGC	1 cut(s)	433
CfoI	GCGC	2 cut(s)	113, 494
Cfr13I	GGNCC	1 cut(s)	154
ClaI	ATCGAT	1 cut(s)	702
Csp6I	GTAC	2 cut(s)	92, 124
CviAII	CATG	5 cut(s)	95, 225, 334, 385, 439
CviQI	GTAC	2 cut(s)	92, 124
DdeI	CTNAG	6 cut(s)	172, 240, 465, 495, 548, 779
DpnI	GATC	5 cut(s)	209, 540, 631, 701, 747
DpnII	GATC	5 cut(s)	207, 538, 629, 699, 745
DriI	GACNNNNNGTC	1 cut(s)	202
Eam1104I	CTCTTC	1 cut(s)	50
Eam1105I	GACNNNNNGTC	1 cut(s)	202
EarI	CTCTTC	1 cut(s)	50
EciI	GGCGGA	1 cut(s)	702
Ecl136II	GAGCTC	1 cut(s)	469
Eco130I	CCWWGG	1 cut(s)	333
Eco147I	AGGCCT	1 cut(s)	568
Eco24I	GRGCYC	2 cut(s)	464, 471
Eco47III	AGCGCT	1 cut(s)	493
Eco53kI	GAGCTC	1 cut(s)	469
Eco57I	CTGAAG	1 cut(s)	472
Eco88I	CYCGRG	3 cut(s)	143, 470, 639
EcoICRI	GAGCTC	1 cut(s)	469
EcoRII	CCWGG	2 cut(s)	417, 568
EcoT14I	CCWWGG	1 cut(s)	333
EcoT38I	GRGCYC	2 cut(s)	464, 471
ErhI	CCWWGG	1 cut(s)	333
FaeI	CATG	5 cut(s)	98, 228, 337, 388, 442
FaqI	GGGAC	1 cut(s)	754
FatI	CATG	5 cut(s)	94, 224, 333, 384, 438
Fnu4HI	GCNGC	3 cut(s)	137, 140, 183
FokI	GGATG	4 cut(s)	60, 469, 613, 709
FriOI	GRGCYC	2 cut(s)	464, 471
Fsp4HI	GCNGC	3 cut(s)	137, 140, 183
FspBI	CTAG	2 cut(s)	89, 179
GlaI	GCGC	2 cut(s)	112, 493
GluI	GCNGC	3 cut(s)	137, 140, 183
HaeII	RGCGCY	1 cut(s)	495
HaeIII	GGCC	2 cut(s)	156, 568
HhaI	GCGC	2 cut(s)	113, 494
Hin1II	CATG	5 cut(s)	98, 228, 337, 388, 442
Hin6I	GCGC	2 cut(s)	111, 492
HinP1I	GCGC	2 cut(s)	111, 492
HindIII	AAGCTT	1 cut(s)	19
HinfI	GANTC	1 cut(s)	250
HphI	GGTGA	2 cut(s)	142, 396
Hpy166II	GTNNAC	1 cut(s)	501
Hpy188I	TCNGA	4 cut(s)	241, 466, 616, 679
Hpy188III	TCNNGA	3 cut(s)	347, 502, 542
Hpy8I	GTNNAC	1 cut(s)	501
HpyAV	CCTTC	2 cut(s)	277, 731
HpyCH4III	ACNGT	1 cut(s)	512
HpyCH4V	TGCA	2 cut(s)	431, 765
HpyF10VI	GCNNNNNNNGC	2 cut(s)	117, 553
HpyF3I	CTNAG	6 cut(s)	172, 240, 465, 495, 548, 779
Hsp92II	CATG	5 cut(s)	98, 228, 337, 388, 442
HspAI	GCGC	2 cut(s)	111, 492
Kzo9I	GATC	5 cut(s)	207, 538, 629, 699, 745
LpnPI	CCDG	6 cut(s)	106, 404, 431, 459, 555, 582
Lsp1109I	GCAGC	2 cut(s)	126, 169
MaeI	CTAG	2 cut(s)	89, 179
MaeIII	GTNAC	3 cut(s)	163, 373, 782
MalI	GATC	5 cut(s)	209, 540, 631, 701, 747
MboI	GATC	5 cut(s)	207, 538, 629, 699, 745
MboII	GAAGA	7 cut(s)	67, 361, 461, 478, 548, 616, 692
MflI	RGATCY	2 cut(s)	538, 629
MhlI	GDGCHC	3 cut(s)	294, 464, 471
MluCI	AATT	2 cut(s)	718, 809
MmeI	TCCRAC	1 cut(s)	544
MnlI	CCTC	9 cut(s)	55, 116, 139, 305, 527, 558, 591, 648, 780
MseI	TTAA	2 cut(s)	585, 817
MslI	CAYNNNNRTG	2 cut(s)	306, 332
MspA1I	CMGCKG	1 cut(s)	139
MspR9I	CCNGG	2 cut(s)	419, 570
MvaI	CCWGG	2 cut(s)	419, 570
MvnI	CGCG	1 cut(s)	113
MwoI	GCNNNNNNNGC	2 cut(s)	117, 553
NcoI	CCATGG	1 cut(s)	333
NdeII	GATC	5 cut(s)	207, 538, 629, 699, 745
NlaIII	CATG	5 cut(s)	98, 228, 337, 388, 442
NmeAIII	GCCGAG	1 cut(s)	87
NmuCI	GTSAC	1 cut(s)	782
NspI	RCATGY	1 cut(s)	228
PaeR7I	CTCGAG	3 cut(s)	143, 470, 639
PceI	AGGCCT	1 cut(s)	568
PfeI	GAWTC	1 cut(s)	250
PflMI	CCANNNNNTGG	1 cut(s)	793
PfoI	TCCNGGA	1 cut(s)	417
PkrI	GCNGC	3 cut(s)	138, 141, 184
PsiI	TTATAA	1 cut(s)	26
Psp124BI	GAGCTC	1 cut(s)	471
Psp6I	CCWGG	2 cut(s)	417, 568
PspGI	CCWGG	2 cut(s)	417, 568
PspPI	GGNCC	1 cut(s)	154
PspXI	VCTCGAGB	3 cut(s)	143, 470, 639
PsuI	RGATCY	2 cut(s)	538, 629
RsaI	GTAC	2 cut(s)	93, 125
RsaNI	GTAC	2 cut(s)	92, 124
RseI	CAYNNNNRTG	2 cut(s)	306, 332
SacI	GAGCTC	1 cut(s)	471
SaqAI	TTAA	2 cut(s)	585, 817
SatI	GCNGC	3 cut(s)	137, 140, 183
Sau3AI	GATC	5 cut(s)	207, 538, 629, 699, 745
Sau96I	GGNCC	1 cut(s)	154
ScrFI	CCNGG	2 cut(s)	419, 570
SduI	GDGCHC	3 cut(s)	294, 464, 471
Sfr274I	CTCGAG	3 cut(s)	143, 470, 639
SlaI	CTCGAG	3 cut(s)	143, 470, 639
SmiMI	CAYNNNNRTG	2 cut(s)	306, 332
SmlI	CTYRAG	4 cut(s)	143, 470, 542, 639
SmoI	CTYRAG	4 cut(s)	143, 470, 542, 639
Sse9I	AATT	2 cut(s)	718, 809
SseBI	AGGCCT	1 cut(s)	568
SsiI	CCGC	3 cut(s)	137, 168, 713
SspI	AATATT	1 cut(s)	236
SspMI	CTAG	2 cut(s)	89, 179
SstI	GAGCTC	1 cut(s)	471
StuI	AGGCCT	1 cut(s)	568
StyD4I	CCNGG	2 cut(s)	417, 568
StyI	CCWWGG	1 cut(s)	333
TaaI	ACNGT	1 cut(s)	512
TaqI	TCGA	6 cut(s)	144, 206, 471, 596, 640, 702
TasI	AATT	2 cut(s)	718, 809
TatI	WGTACW	1 cut(s)	91
TauI	GCSGC	1 cut(s)	139
TfiI	GAWTC	1 cut(s)	250
Tru1I	TTAA	2 cut(s)	585, 817
Tru9I	TTAA	2 cut(s)	585, 817
TscAI	CASTG	1 cut(s)	217
TseFI	GTSAC	1 cut(s)	782
TseI	GCWGC	2 cut(s)	139, 182
Tsp45I	GTSAC	1 cut(s)	782
TspDTI	ATGAA	6 cut(s)	21, 86, 255, 373, 564, 617
TspGWI	ACGGA	1 cut(s)	758
TspRI	CASTG	1 cut(s)	217
Van91I	CCANNNNNTGG	1 cut(s)	793
XapI	RAATTY	2 cut(s)	718, 809
XceI	RCATGY	1 cut(s)	228
XhoI	CTCGAG	3 cut(s)	143, 470, 639
XspI	CTAG	2 cut(s)	89, 179

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.