Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002337

Physical Location & Seq

Genomic Coordinates Reverse (-)

15719018 .. 15722527

Gene Structure 3510 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G142200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 816 bp

ATGGCAGCACCAAAAGAAGAGAAGCATTTTGTTCTAGTACATGGGGCTTGCCATGGCTCCTGGTGCTGGTACAAGATCAAGCCAAGGCTAGAGTCTGCTGGTCACAGAGTCACAGCCTTGGACCTTGCAGCTTCAGGGATCAACACGAAGGCCATACAAGATGTTCACTCTTTAGCAGAGTATTCTGAGCCTCTGTTGGAGTTTATAGCCTCACTTGGTCCAGAAGAAAAGGTGATCCTTGTAGGGCATAGCCTTGGAGGCATGAGCTTGGCCCTTGCCATGGAAAACTTCCCACAGAAAATTTCTGTTGCTGTTTTCTTGACCGCCTTTGTGCCAGATACCACACACCAGCCTTCACATGTTTTGGATCAGTACAATCAAAACACGCCCGCAGAAGCATGGCTGGACACTCAGTTTACAAATTATGGAAGTGCTGAAGAACCCTTAGTGTCAATGCATTTCGGTCCTGAGTTCTTAGCCAAGCTCTATCAACTCAGCCCCATTGAGGATCTGGAACTCGCCAAGAGTTTAGTAAGGGTAGGTTCGCTCTTTCTTCAAGACTTGTCAAAGATGAAGAAATTCTCGAATGTGGGGTATGGTCGGGTCCCACGAGTTTATGTGGTTTGTAGTGAAGATAAAGGAATTCCTGAGGAGTTTCAACGGTGGATGATTGAAAACAGTGGGGTTACAAATGTGGTGGAGATCAAGGGCGCCGATCATATGCCAATGTTTTCAAAGACCCAAGAAGTTTGCAATGCTCTTGTAGATATAGCAAATAAGTATACTTCAGATTCAACAATGTTAGGATCCGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0006082 GO:0006725 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009056 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009627 GO:0009696 GO:0009814 GO:0009817 GO:0009987 GO:0010817 GO:0016137 GO:0016139 GO:0016787 GO:0016788 GO:0016829 GO:0016830 GO:0016832 GO:0016999 GO:0017144 GO:0018958 GO:0019752 GO:0032787 GO:0042445 GO:0042537 GO:0043207 GO:0043436 GO:0044237 GO:0044281 GO:0045087 GO:0046593 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0052689 GO:0065007 GO:0065008 GO:0071704 GO:0080030 GO:0080031 GO:0080032 GO:0098542 GO:1901135 GO:1901136 GO:1901360 GO:1901575 GO:1901615 GO:1901657 GO:1901658

KEGG Pathways

Metabolic & Signaling

ko00460 ko01110 map00460 map01110

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6

Protein Analysis

272

Amino Acids

29.93

Weight (kDa)

5.45

Isoelectric Point (pI)

37.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23590 AT2G23600 AT2G23600 AT2G23600 AT2G23610 AT2G23610 AT2G23620
fragaria_vesca	FvH4_1g14820
malus_domestica	MD02G1161400.v1.1 MD02G1161600.v1.1 MD15G1275500.v1.1 MD15G1275800.v1.1
prunus_persica	Prupe.7G142100_v2.0.a1 Prupe.7G142200_v2.0.a1 Prupe.7G142200_v2.0.a1
pyrus_communis	pycom02g12750 pycom15g23850 pycom15g23860
rosa_chinensis	RchiOBHm_Chr1g0329881 RchiOBHm_Chr2g0103791
rosa_laevigata	RLG00000017260 RLG00000017263 RLG00000029860
rosa_multiflora	Rmu_sc0000112.1_g000011 Rmu_sc0000112.1_g000026 Rmu_sc0002081.1_g000001
rosa_roxburghii	Rroxscaffold_2G00139360 Rroxscaffold_2G00139380 Rroxscaffold_4G00320540 Rroxscaffold_7G00215680
rosa_rugosa	Rorug01G0084000 Rorug02G0117300
rosa_samantha	Rh1AG101900 Rh1BG081100 Rh1CG097400 Rh1DG105000 Rh2AG166300 Rh2BG173500 Rh2CG172200 Rh2DG171700
rosa_wichuraiana	Rw1G008060 Rw1G008110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	710
AccI	GTMKAC	1 cut(s)	782
AciI	CCGC	2 cut(s)	324, 390
AclWI	GGATC	6 cut(s)	146, 229, 375, 516, 801, 814
AcsI	RAATTY	3 cut(s)	300, 578, 642
AcuI	CTGAAG	3 cut(s)	117, 456, 771
AcyI	GRCGYC	1 cut(s)	711
AfaI	GTAC	3 cut(s)	39, 71, 374
AfiI	CCNNNNNNNGG	3 cut(s)	66, 280, 505
AflIII	ACRYGT	1 cut(s)	358
AgsI	TTSAA	5 cut(s)	557, 659, 674, 735, 795
AjnI	CCWGG	1 cut(s)	59
AluBI	AGCT	3 cut(s)	131, 267, 484
AluI	AGCT	3 cut(s)	131, 267, 484
AlwI	GGATC	6 cut(s)	146, 229, 375, 516, 801, 814
AoxI	GGCC	2 cut(s)	150, 270
ApeKI	GCWGC	2 cut(s)	5, 128
ApoI	RAATTY	3 cut(s)	300, 578, 642
Asp700I	GAANNNNTTC	1 cut(s)	578
AspLEI	GCGC	1 cut(s)	713
AspS9I	GGNCC	5 cut(s)	121, 218, 271, 464, 604
AsuHPI	GGTGA	1 cut(s)	244
AvaII	GGWCC	4 cut(s)	121, 218, 464, 604
AxyI	CCTNAGG	1 cut(s)	648
BamHI	GGATCC	1 cut(s)	806
BanI	GGYRCC	1 cut(s)	710
BauI	CACGAG	1 cut(s)	609
BbvI	GCAGC	2 cut(s)	17, 140
BciT130I	CCWGG	1 cut(s)	61
BfaI	CTAG	2 cut(s)	35, 89
BfoI	RGCGCY	1 cut(s)	714
BglI	GCCNNNNNGGC	1 cut(s)	258
BisI	GCNGC	2 cut(s)	6, 129
BlsI	GCNGC	2 cut(s)	7, 130
Bme1390I	CCNGG	1 cut(s)	61
Bme18I	GGWCC	4 cut(s)	121, 218, 464, 604
BmgT120I	GGNCC	5 cut(s)	121, 218, 271, 464, 604
BmiI	GGNNCC	5 cut(s)	58, 605, 606, 712, 808
BmrFI	CCNGG	1 cut(s)	61
BsaHI	GRCGYC	1 cut(s)	711
BsaJI	CCNNGG	5 cut(s)	52, 83, 117, 253, 279
Bsc4I	CCNNNNNNNGG	3 cut(s)	66, 280, 505
Bse21I	CCTNAGG	1 cut(s)	648
Bse3DI	GCAATG	1 cut(s)	760
BseBI	CCWGG	1 cut(s)	61
BseDI	CCNNGG	5 cut(s)	52, 83, 117, 253, 279
BseGI	GGATG	1 cut(s)	672
BseLI	CCNNNNNNNGG	3 cut(s)	66, 280, 505
BseMI	GCAATG	1 cut(s)	760
BseMII	CTCAG	5 cut(s)	177, 425, 459, 508, 639
BseRI	GAGGAG	1 cut(s)	665
BseXI	GCAGC	2 cut(s)	17, 140
BshFI	GGCC	2 cut(s)	152, 272
BshNI	GGYRCC	1 cut(s)	710
BsiSI	CCGG	1 cut(s)	810
BslFI	GGGAC	1 cut(s)	590
BslI	CCNNNNNNNGG	3 cut(s)	66, 280, 505
BsmFI	GGGAC	1 cut(s)	590
BsnI	GGCC	2 cut(s)	152, 272
Bsp143I	GATC	8 cut(s)	75, 138, 234, 367, 508, 702, 715, 806
Bsp19I	CCATGG	2 cut(s)	52, 279
BspACI	CCGC	2 cut(s)	324, 390
BspANI	GGCC	2 cut(s)	152, 272
BspCNI	CTCAG	5 cut(s)	178, 424, 460, 507, 640
BspLI	GGNNCC	5 cut(s)	58, 605, 606, 712, 808
BspPI	GGATC	6 cut(s)	146, 229, 375, 516, 801, 814
BspT107I	GGYRCC	1 cut(s)	710
BsrDI	GCAATG	1 cut(s)	760
BssECI	CCNNGG	5 cut(s)	52, 83, 117, 253, 279
BssMI	GATC	8 cut(s)	75, 138, 234, 367, 508, 702, 715, 806
BssNAI	GTATAC	1 cut(s)	783
BssNI	GRCGYC	1 cut(s)	711
BssSI	CACGAG	1 cut(s)	609
BssT1I	CCWWGG	5 cut(s)	52, 83, 117, 253, 279
Bst1107I	GTATAC	1 cut(s)	783
Bst2BI	CACGAG	1 cut(s)	609
Bst2UI	CCWGG	1 cut(s)	61
Bst4CI	ACNGT	2 cut(s)	663, 680
Bst6I	CTCTTC	1 cut(s)	12
BstACI	GRCGYC	1 cut(s)	711
BstC8I	GCNNGC	2 cut(s)	49, 390
BstDEI	CTNAG	7 cut(s)	186, 411, 445, 468, 475, 494, 648
BstDSI	CCRYGG	2 cut(s)	52, 279
BstF5I	GGATG	1 cut(s)	672
BstH2I	RGCGCY	1 cut(s)	714
BstHHI	GCGC	1 cut(s)	713
BstKTI	GATC	8 cut(s)	78, 141, 237, 370, 511, 705, 718, 809
BstMBI	GATC	8 cut(s)	75, 138, 234, 367, 508, 702, 715, 806
BstMWI	GCNNNNNNNGC	2 cut(s)	63, 258
BstNI	CCWGG	1 cut(s)	61
BstNSI	RCATGY	1 cut(s)	362
BstSCI	CCNGG	1 cut(s)	59
BstV1I	GCAGC	2 cut(s)	17, 140
BstX2I	RGATCY	2 cut(s)	508, 806
BstYI	RGATCY	2 cut(s)	508, 806
BstZ17I	GTATAC	1 cut(s)	783
Bsu36I	CCTNAGG	1 cut(s)	648
BsuRI	GGCC	2 cut(s)	152, 272
BtgI	CCRYGG	2 cut(s)	52, 279
BtsCI	GGATG	1 cut(s)	672
BtsIMutI	CAGTG	1 cut(s)	685
Cac8I	GCNNGC	2 cut(s)	49, 390
CfoI	GCGC	1 cut(s)	713
Cfr13I	GGNCC	5 cut(s)	121, 218, 271, 464, 604
Csp6I	GTAC	3 cut(s)	38, 70, 373
CspCI	CAANNNNNGTGG	2 cut(s)	678, 713
CviAII	CATG	6 cut(s)	41, 53, 262, 280, 359, 399
CviQI	GTAC	3 cut(s)	38, 70, 373
DdeI	CTNAG	7 cut(s)	186, 411, 445, 468, 475, 494, 648
DinI	GGCGCC	1 cut(s)	712
DpnI	GATC	8 cut(s)	77, 140, 236, 369, 510, 704, 717, 808
DpnII	GATC	8 cut(s)	75, 138, 234, 367, 508, 702, 715, 806
Eam1104I	CTCTTC	1 cut(s)	12
EarI	CTCTTC	1 cut(s)	12
Eco130I	CCWWGG	5 cut(s)	52, 83, 117, 253, 279
Eco47I	GGWCC	4 cut(s)	121, 218, 464, 604
Eco57I	CTGAAG	3 cut(s)	117, 456, 771
Eco81I	CCTNAGG	1 cut(s)	648
EcoO109I	RGGNCCY	1 cut(s)	604
EcoRI	GAATTC	1 cut(s)	642
EcoRII	CCWGG	1 cut(s)	59
EcoT14I	CCWWGG	5 cut(s)	52, 83, 117, 253, 279
EcoT22I	ATGCAT	1 cut(s)	459
EgeI	GGCGCC	1 cut(s)	712
EheI	GGCGCC	1 cut(s)	712
ErhI	CCWWGG	5 cut(s)	52, 83, 117, 253, 279
FaeI	CATG	6 cut(s)	44, 56, 265, 283, 362, 402
FaqI	GGGAC	1 cut(s)	590
FatI	CATG	6 cut(s)	40, 52, 261, 279, 358, 398
FauI	CCCGC	1 cut(s)	397
FauNDI	CATATG	1 cut(s)	720
FblI	GTMKAC	1 cut(s)	782
Fnu4HI	GCNGC	2 cut(s)	6, 129
FokI	GGATG	1 cut(s)	679
Fsp4HI	GCNGC	2 cut(s)	6, 129
FspBI	CTAG	2 cut(s)	35, 89
GlaI	GCGC	1 cut(s)	712
GluI	GCNGC	2 cut(s)	6, 129
HaeII	RGCGCY	1 cut(s)	714
HaeIII	GGCC	2 cut(s)	152, 272
HapII	CCGG	1 cut(s)	810
HhaI	GCGC	1 cut(s)	713
Hin1I	GRCGYC	1 cut(s)	711
Hin1II	CATG	6 cut(s)	44, 56, 265, 283, 362, 402
Hin6I	GCGC	1 cut(s)	711
HinP1I	GCGC	1 cut(s)	711
HinfI	GANTC	3 cut(s)	92, 108, 791
HpaII	CCGG	1 cut(s)	810
HphI	GGTGA	1 cut(s)	244
Hpy166II	GTNNAC	3 cut(s)	166, 417, 783
Hpy188I	TCNGA	2 cut(s)	187, 790
Hpy188III	TCNNGA	7 cut(s)	221, 319, 467, 512, 557, 583, 647
Hpy8I	GTNNAC	3 cut(s)	166, 417, 783
HpyAV	CCTTC	2 cut(s)	142, 363
HpyCH4III	ACNGT	2 cut(s)	663, 680
HpyCH4V	TGCA	3 cut(s)	128, 457, 753
HpyF10VI	GCNNNNNNNGC	2 cut(s)	63, 258
HpyF3I	CTNAG	7 cut(s)	186, 411, 445, 468, 475, 494, 648
Hsp92I	GRCGYC	1 cut(s)	711
Hsp92II	CATG	6 cut(s)	44, 56, 265, 283, 362, 402
HspAI	GCGC	1 cut(s)	711
KasI	GGCGCC	1 cut(s)	710
KflI	GGGWCCC	1 cut(s)	604
Kzo9I	GATC	8 cut(s)	75, 138, 234, 367, 508, 702, 715, 806
LmnI	GCTCC	1 cut(s)	62
Lsp1109I	GCAGC	2 cut(s)	17, 140
MaeI	CTAG	2 cut(s)	35, 89
MaeIII	GTNAC	3 cut(s)	101, 109, 685
MalI	GATC	8 cut(s)	77, 140, 236, 369, 510, 704, 717, 808
MboI	GATC	8 cut(s)	75, 138, 234, 367, 508, 702, 715, 806
MboII	GAAGA	6 cut(s)	29, 236, 449, 545, 586, 644
MflI	RGATCY	2 cut(s)	508, 806
MluCI	AATT	4 cut(s)	300, 421, 578, 642
Mly113I	GGCGCC	1 cut(s)	711
MlyI	GAGTC	2 cut(s)	101, 117
MmeI	TCCRAC	1 cut(s)	177
MnlI	CCTC	5 cut(s)	201, 220, 251, 499, 643
Mph1103I	ATGCAT	1 cut(s)	459
MroXI	GAANNNNTTC	1 cut(s)	578
MspI	CCGG	1 cut(s)	810
MspR9I	CCNGG	1 cut(s)	61
MvaI	CCWGG	1 cut(s)	61
MwoI	GCNNNNNNNGC	2 cut(s)	63, 258
NarI	GGCGCC	1 cut(s)	711
NcoI	CCATGG	2 cut(s)	52, 279
NdeI	CATATG	1 cut(s)	720
NdeII	GATC	8 cut(s)	75, 138, 234, 367, 508, 702, 715, 806
NlaIII	CATG	6 cut(s)	44, 56, 265, 283, 362, 402
NlaIV	GGNNCC	5 cut(s)	58, 605, 606, 712, 808
NmuCI	GTSAC	2 cut(s)	101, 109
NsiI	ATGCAT	1 cut(s)	459
NspI	RCATGY	1 cut(s)	362
PciI	ACATGT	1 cut(s)	358
PcsI	WCGNNNNNNNCGW	1 cut(s)	607
PdmI	GAANNNNTTC	1 cut(s)	578
PfeI	GAWTC	1 cut(s)	791
PkrI	GCNGC	2 cut(s)	7, 130
PleI	GAGTC	2 cut(s)	100, 116
PluTI	GGCGCC	1 cut(s)	714
PpsI	GAGTC	2 cut(s)	100, 116
PpuMI	RGGWCCY	1 cut(s)	604
PscI	ACATGT	1 cut(s)	358
Psp5II	RGGWCCY	1 cut(s)	604
Psp6I	CCWGG	1 cut(s)	59
PspGI	CCWGG	1 cut(s)	59
PspN4I	GGNNCC	5 cut(s)	58, 605, 606, 712, 808
PspPI	GGNCC	5 cut(s)	121, 218, 271, 464, 604
PspPPI	RGGWCCY	1 cut(s)	604
PsuI	RGATCY	2 cut(s)	508, 806
RsaI	GTAC	3 cut(s)	39, 71, 374
RsaNI	GTAC	3 cut(s)	38, 70, 373
SatI	GCNGC	2 cut(s)	6, 129
Sau3AI	GATC	8 cut(s)	75, 138, 234, 367, 508, 702, 715, 806
Sau96I	GGNCC	5 cut(s)	121, 218, 271, 464, 604
SchI	GAGTC	2 cut(s)	101, 117
ScrFI	CCNGG	1 cut(s)	61
SetI	ASST	6 cut(s)	126, 133, 234, 269, 486, 544
SfoI	GGCGCC	1 cut(s)	712
SinI	GGWCC	4 cut(s)	121, 218, 464, 604
Sse9I	AATT	4 cut(s)	300, 421, 578, 642
SsiI	CCGC	2 cut(s)	324, 390
SspDI	GGCGCC	1 cut(s)	710
SspMI	CTAG	2 cut(s)	35, 89
StyD4I	CCNGG	1 cut(s)	59
StyI	CCWWGG	5 cut(s)	52, 83, 117, 253, 279
TaaI	ACNGT	2 cut(s)	663, 680
TaqI	TCGA	1 cut(s)	584
TaqII	GACCGA	1 cut(s)	452
TasI	AATT	4 cut(s)	300, 421, 578, 642
TatI	WGTACW	2 cut(s)	37, 372
TfiI	GAWTC	1 cut(s)	791
TscAI	CASTG	1 cut(s)	685
TseFI	GTSAC	2 cut(s)	101, 109
TseI	GCWGC	2 cut(s)	5, 128
Tsp45I	GTSAC	2 cut(s)	101, 109
TspDTI	ATGAA	1 cut(s)	587
TspRI	CASTG	1 cut(s)	685
VpaK11BI	GGWCC	4 cut(s)	121, 218, 464, 604
XapI	RAATTY	3 cut(s)	300, 578, 642
XceI	RCATGY	1 cut(s)	362
XcmI	CCANNNNNNNNNTGG	1 cut(s)	508
XmiI	GTMKAC	1 cut(s)	782
XmnI	GAANNNNTTC	1 cut(s)	578
XspI	CTAG	2 cut(s)	35, 89
Zsp2I	ATGCAT	1 cut(s)	459

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.