Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002337

Physical Location & Seq

Genomic Coordinates Reverse (-)

15715877 .. 15718237

Gene Structure 2361 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G142100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 804 bp

ATGGCAGCAACCAACGAAGCACAGAAGGCTCATGCTCATTTCGTTCTAGTACACGGTGCTGGCCATGGGGCTTGGTGCTGGTACAAGATCAAGCCGAAGCTCGAGTCTTCCGGTCACAAGGTGACGGTGCTGAACCTTACCGGTTCCGGCATCAACATGAAGGCCATACACGATGTTCACTCACTAGCAGAGTACTCCGAGCCTTTGTTGGAGCTTATAGCCTCACTTGGTCCAAAAGAAAAGGTGATCCTTGTAGGGCATAGCCTTGGAGGCATGAACTTGTCCCTTGCCATGGAAAGGTTCCCACAGAAAATTTCTGCTGCTGTTTTCTTGACTGCCTTTCTGCCAGATACAACTCACCAGCCATCATATGTTATGGATGAGTTCATGCAGAAGATACCAGCAGACTCATGGCTAGACACTCAGTTTGAACAGTTTGGAAGCGCCAAAGAACCCTTAACGTCGATATTCTTCGGTCCCAAGTACTTACAGGCGAACCTCTATCAACTCAGCCCCATTGAGGATCTGGAACTTGCCAAGAGTTTAGTGAGGAAGAGTTCATTCTTTCGTGAAGAAGTGGCTAAGATGAAGAAGTTCTCAAATGAGGGATATGGGTCGGTTACACGAGTTTATGTGGTTTGTGACAAAGATTTGATAATAACTGAGGAATTTCAGCGATGGATGATTGCAAACAGCGGGGTTAAAAATGTGGTGGAGATTAAGGGTGCTGATCATATGCCAATGTTTTCAAAGCCACAAGAACTTTCCAATGCTTTTCTGGAGATAGCACAAAAGTACGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0006082 GO:0006725 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009056 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009627 GO:0009696 GO:0009814 GO:0009817 GO:0009987 GO:0010817 GO:0016137 GO:0016139 GO:0016787 GO:0016788 GO:0016829 GO:0016830 GO:0016832 GO:0016999 GO:0017144 GO:0018958 GO:0019752 GO:0032787 GO:0042445 GO:0042537 GO:0043207 GO:0043436 GO:0044237 GO:0044281 GO:0045087 GO:0046593 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0052689 GO:0065007 GO:0065008 GO:0071704 GO:0080030 GO:0080031 GO:0080032 GO:0098542 GO:1901135 GO:1901136 GO:1901360 GO:1901575 GO:1901615 GO:1901657 GO:1901658

KEGG Pathways

Metabolic & Signaling

ko00460 ko01110 map00460 map01110

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6

Protein Analysis

268

Amino Acids

29.84

Weight (kDa)

6.56

Isoelectric Point (pI)

29.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23590 AT2G23600 AT2G23600 AT2G23600 AT2G23610 AT2G23610 AT2G23620
fragaria_vesca	FvH4_1g14820
malus_domestica	MD02G1161400.v1.1 MD02G1161600.v1.1 MD15G1275500.v1.1 MD15G1275800.v1.1
prunus_persica	Prupe.7G142100_v2.0.a1 Prupe.7G142200_v2.0.a1 Prupe.7G142200_v2.0.a1
pyrus_communis	pycom02g12750 pycom15g23850 pycom15g23860
rosa_chinensis	RchiOBHm_Chr1g0329881 RchiOBHm_Chr2g0103791
rosa_laevigata	RLG00000017260 RLG00000017263 RLG00000029860
rosa_multiflora	Rmu_sc0000112.1_g000011 Rmu_sc0000112.1_g000026 Rmu_sc0002081.1_g000001
rosa_roxburghii	Rroxscaffold_2G00139360 Rroxscaffold_2G00139380 Rroxscaffold_4G00320540 Rroxscaffold_7G00215680
rosa_rugosa	Rorug01G0084000 Rorug02G0117300
rosa_samantha	Rh1AG101900 Rh1BG081100 Rh1CG097400 Rh1DG105000 Rh2AG166300 Rh2BG173500 Rh2CG172200 Rh2DG171700
rosa_wichuraiana	Rw1G008060 Rw1G008110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	696
AclWI	GGATC	2 cut(s)	241, 531
AcoI	YGGCCR	1 cut(s)	61
AcsI	RAATTY	2 cut(s)	312, 668
AdeI	CACNNNGTG	1 cut(s)	121
AfaI	GTAC	5 cut(s)	51, 83, 194, 485, 797
AfiI	CCNNNNNNNGG	3 cut(s)	292, 297, 520
AgeI	ACCGGT	1 cut(s)	140
AgsI	TTSAA	2 cut(s)	431, 750
AluBI	AGCT	2 cut(s)	100, 214
AluI	AGCT	2 cut(s)	100, 214
AlwI	GGATC	2 cut(s)	241, 531
Ama87I	CYCGRG	1 cut(s)	101
AoxI	GGCC	2 cut(s)	61, 162
ApeKI	GCWGC	2 cut(s)	5, 320
ApoI	RAATTY	2 cut(s)	312, 668
ArsI	GACNNNNNNTTYG	4 cut(s)	89, 121, 410, 442
AsiGI	ACCGGT	1 cut(s)	140
Asp700I	GAANNNNTTC	1 cut(s)	593
AspLEI	GCGC	1 cut(s)	446
AspS9I	GGNCC	2 cut(s)	230, 476
AsuHPI	GGTGA	3 cut(s)	133, 256, 350
AvaI	CYCGRG	1 cut(s)	101
AvaII	GGWCC	2 cut(s)	230, 476
BalI	TGGCCA	1 cut(s)	63
BauI	CACGAG	1 cut(s)	624
BbsI	GAAGAC	1 cut(s)	99
BbvI	GCAGC	2 cut(s)	17, 307
BccI	CCATC	2 cut(s)	373, 672
BclI	TGATCA	1 cut(s)	730
BfaI	CTAG	3 cut(s)	47, 185, 416
BfoI	RGCGCY	1 cut(s)	447
BglI	GCCNNNNNGGC	1 cut(s)	270
BisI	GCNGC	2 cut(s)	6, 321
BlsI	GCNGC	2 cut(s)	7, 322
BmcAI	AGTACT	2 cut(s)	194, 485
Bme18I	GGWCC	2 cut(s)	230, 476
BmeT110I	CYCGRG	1 cut(s)	101
BmgT120I	GGNCC	2 cut(s)	230, 476
BmiI	GGNNCC	3 cut(s)	145, 302, 478
BmsI	GCATC	1 cut(s)	159
BpiI	GAAGAC	1 cut(s)	99
BpmI	CTGGAG	1 cut(s)	800
BsaJI	CCNNGG	3 cut(s)	64, 265, 291
BsaWI	WCCGGW	2 cut(s)	110, 140
Bsc4I	CCNNNNNNNGG	3 cut(s)	292, 297, 520
Bse118I	RCCGGY	1 cut(s)	140
BseDI	CCNNGG	3 cut(s)	64, 265, 291
BseGI	GGATG	2 cut(s)	385, 687
BseLI	CCNNNNNNNGG	3 cut(s)	292, 297, 520
BseMII	CTCAG	3 cut(s)	437, 523, 654
BseXI	GCAGC	2 cut(s)	17, 307
BshFI	GGCC	2 cut(s)	63, 164
BshTI	ACCGGT	1 cut(s)	140
BsiHKCI	CYCGRG	1 cut(s)	101
BsiSI	CCGG	3 cut(s)	111, 141, 147
BslFI	GGGAC	2 cut(s)	268, 462
BslI	CCNNNNNNNGG	3 cut(s)	292, 297, 520
BsmFI	GGGAC	2 cut(s)	268, 462
BsnI	GGCC	2 cut(s)	63, 164
BsoBI	CYCGRG	1 cut(s)	101
Bsp143I	GATC	4 cut(s)	87, 246, 523, 730
Bsp19I	CCATGG	2 cut(s)	64, 291
BspACI	CCGC	1 cut(s)	696
BspANI	GGCC	2 cut(s)	63, 164
BspCNI	CTCAG	3 cut(s)	436, 522, 655
BspLI	GGNNCC	3 cut(s)	145, 302, 478
BspPI	GGATC	2 cut(s)	241, 531
BsrFI	RCCGGY	1 cut(s)	140
BssAI	RCCGGY	1 cut(s)	140
BssECI	CCNNGG	3 cut(s)	64, 265, 291
BssMI	GATC	4 cut(s)	87, 246, 523, 730
BssSI	CACGAG	1 cut(s)	624
BssT1I	CCWWGG	3 cut(s)	64, 265, 291
Bst2BI	CACGAG	1 cut(s)	624
Bst4CI	ACNGT	3 cut(s)	56, 127, 435
Bst6I	CTCTTC	1 cut(s)	548
BstC8I	GCNNGC	1 cut(s)	61
BstDEI	CTNAG	4 cut(s)	423, 509, 582, 663
BstDSI	CCRYGG	2 cut(s)	64, 291
BstF5I	GGATG	2 cut(s)	385, 687
BstH2I	RGCGCY	1 cut(s)	447
BstHHI	GCGC	1 cut(s)	446
BstKTI	GATC	4 cut(s)	90, 249, 526, 733
BstMBI	GATC	4 cut(s)	87, 246, 523, 730
BstMWI	GCNNNNNNNGC	2 cut(s)	26, 270
BstV1I	GCAGC	2 cut(s)	17, 307
BstV2I	GAAGAC	1 cut(s)	99
BstX2I	RGATCY	1 cut(s)	523
BstYI	RGATCY	1 cut(s)	523
BsuRI	GGCC	2 cut(s)	63, 164
BtgI	CCRYGG	2 cut(s)	64, 291
BtgZI	GCGATG	1 cut(s)	691
BtsCI	GGATG	2 cut(s)	385, 687
Cac8I	GCNNGC	1 cut(s)	61
CfoI	GCGC	1 cut(s)	446
Cfr10I	RCCGGY	1 cut(s)	140
Cfr13I	GGNCC	2 cut(s)	230, 476
Csp6I	GTAC	5 cut(s)	50, 82, 193, 484, 796
CspAI	ACCGGT	1 cut(s)	140
CviAII	CATG	7 cut(s)	32, 65, 157, 274, 292, 388, 411
CviQI	GTAC	5 cut(s)	50, 82, 193, 484, 796
DdeI	CTNAG	4 cut(s)	423, 509, 582, 663
DpnI	GATC	4 cut(s)	89, 248, 525, 732
DpnII	GATC	4 cut(s)	87, 246, 523, 730
DraIII	CACNNNGTG	1 cut(s)	121
EaeI	YGGCCR	1 cut(s)	61
Eam1104I	CTCTTC	1 cut(s)	548
EarI	CTCTTC	1 cut(s)	548
Eco130I	CCWWGG	3 cut(s)	64, 265, 291
Eco47I	GGWCC	2 cut(s)	230, 476
Eco88I	CYCGRG	1 cut(s)	101
EcoT14I	CCWWGG	3 cut(s)	64, 265, 291
ErhI	CCWWGG	3 cut(s)	64, 265, 291
FaeI	CATG	7 cut(s)	35, 68, 160, 277, 295, 391, 414
FaqI	GGGAC	2 cut(s)	268, 462
FatI	CATG	7 cut(s)	31, 64, 156, 273, 291, 387, 410
FauI	CCCGC	1 cut(s)	689
FauNDI	CATATG	2 cut(s)	370, 735
FbaI	TGATCA	1 cut(s)	730
Fnu4HI	GCNGC	2 cut(s)	6, 321
FokI	GGATG	2 cut(s)	392, 694
Fsp4HI	GCNGC	2 cut(s)	6, 321
FspBI	CTAG	3 cut(s)	47, 185, 416
GlaI	GCGC	1 cut(s)	445
GluI	GCNGC	2 cut(s)	6, 321
GsuI	CTGGAG	1 cut(s)	800
HaeII	RGCGCY	1 cut(s)	447
HaeIII	GGCC	2 cut(s)	63, 164
HapII	CCGG	3 cut(s)	111, 141, 147
HhaI	GCGC	1 cut(s)	446
Hin1II	CATG	7 cut(s)	35, 68, 160, 277, 295, 391, 414
Hin6I	GCGC	1 cut(s)	444
HinP1I	GCGC	1 cut(s)	444
HinfI	GANTC	2 cut(s)	104, 407
HpaII	CCGG	3 cut(s)	111, 141, 147
HphI	GGTGA	3 cut(s)	133, 256, 350
Hpy166II	GTNNAC	2 cut(s)	52, 178
Hpy188I	TCNGA	1 cut(s)	199
Hpy188III	TCNNGA	4 cut(s)	331, 527, 569, 779
Hpy8I	GTNNAC	2 cut(s)	52, 178
Hpy99I	CGWCG	1 cut(s)	466
HpyAV	CCTTC	2 cut(s)	19, 154
HpyCH4III	ACNGT	3 cut(s)	56, 127, 435
HpyCH4IV	ACGT	1 cut(s)	461
HpyCH4V	TGCA	2 cut(s)	391, 689
HpyF10VI	GCNNNNNNNGC	2 cut(s)	26, 270
HpyF3I	CTNAG	4 cut(s)	423, 509, 582, 663
HpySE526I	ACGT	1 cut(s)	461
Hsp92II	CATG	7 cut(s)	35, 68, 160, 277, 295, 391, 414
HspAI	GCGC	1 cut(s)	444
Ksp22I	TGATCA	1 cut(s)	730
Kzo9I	GATC	4 cut(s)	87, 246, 523, 730
LmnI	GCTCC	1 cut(s)	211
Lsp1109I	GCAGC	2 cut(s)	17, 307
LweI	GCATC	1 cut(s)	159
MaeI	CTAG	3 cut(s)	47, 185, 416
MaeII	ACGT	1 cut(s)	461
MaeIII	GTNAC	4 cut(s)	113, 121, 619, 641
MalI	GATC	4 cut(s)	89, 248, 525, 732
MboI	GATC	4 cut(s)	87, 246, 523, 730
MboII	GAAGA	6 cut(s)	99, 406, 463, 565, 584, 601
MflI	RGATCY	1 cut(s)	523
MlsI	TGGCCA	1 cut(s)	63
MluCI	AATT	2 cut(s)	312, 668
MluNI	TGGCCA	1 cut(s)	63
MlyI	GAGTC	2 cut(s)	113, 401
MmeI	TCCRAC	1 cut(s)	189
MnlI	CCTC	7 cut(s)	232, 263, 509, 514, 543, 598, 658
Mox20I	TGGCCA	1 cut(s)	63
MroXI	GAANNNNTTC	1 cut(s)	593
MscI	TGGCCA	1 cut(s)	63
MseI	TTAA	4 cut(s)	458, 702, 720, 802
MslI	CAYNNNNRTG	1 cut(s)	155
Msp20I	TGGCCA	1 cut(s)	63
MspA1I	CMGCKG	1 cut(s)	696
MspI	CCGG	3 cut(s)	111, 141, 147
MwoI	GCNNNNNNNGC	2 cut(s)	26, 270
NcoI	CCATGG	2 cut(s)	64, 291
NdeI	CATATG	2 cut(s)	370, 735
NdeII	GATC	4 cut(s)	87, 246, 523, 730
NlaIII	CATG	7 cut(s)	35, 68, 160, 277, 295, 391, 414
NlaIV	GGNNCC	3 cut(s)	145, 302, 478
NmuCI	GTSAC	3 cut(s)	113, 121, 641
PaeR7I	CTCGAG	1 cut(s)	101
PdmI	GAANNNNTTC	1 cut(s)	593
PinAI	ACCGGT	1 cut(s)	140
PkrI	GCNGC	2 cut(s)	7, 322
PleI	GAGTC	2 cut(s)	112, 401
PpsI	GAGTC	2 cut(s)	112, 401
PspN4I	GGNNCC	3 cut(s)	145, 302, 478
PspPI	GGNCC	2 cut(s)	230, 476
PspXI	VCTCGAGB	1 cut(s)	101
PsuI	RGATCY	1 cut(s)	523
RsaI	GTAC	5 cut(s)	51, 83, 194, 485, 797
RsaNI	GTAC	5 cut(s)	50, 82, 193, 484, 796
RseI	CAYNNNNRTG	1 cut(s)	155
SaqAI	TTAA	4 cut(s)	458, 702, 720, 802
SatI	GCNGC	2 cut(s)	6, 321
Sau3AI	GATC	4 cut(s)	87, 246, 523, 730
Sau96I	GGNCC	2 cut(s)	230, 476
ScaI	AGTACT	2 cut(s)	194, 485
SchI	GAGTC	2 cut(s)	113, 401
SetI	ASST	8 cut(s)	102, 123, 138, 216, 246, 302, 464, 501
SfaNI	GCATC	1 cut(s)	159
Sfr274I	CTCGAG	1 cut(s)	101
SinI	GGWCC	2 cut(s)	230, 476
SlaI	CTCGAG	1 cut(s)	101
SmiMI	CAYNNNNRTG	1 cut(s)	155
SmlI	CTYRAG	1 cut(s)	101
SmoI	CTYRAG	1 cut(s)	101
Sse9I	AATT	2 cut(s)	312, 668
SsiI	CCGC	1 cut(s)	696
SspMI	CTAG	3 cut(s)	47, 185, 416
StyI	CCWWGG	3 cut(s)	64, 265, 291
TaaI	ACNGT	3 cut(s)	56, 127, 435
TaiI	ACGT	1 cut(s)	464
TaqI	TCGA	2 cut(s)	102, 464
TaqII	GACCGA	1 cut(s)	464
TasI	AATT	2 cut(s)	312, 668
TatI	WGTACW	3 cut(s)	49, 192, 483
Tru1I	TTAA	4 cut(s)	458, 702, 720, 802
Tru9I	TTAA	4 cut(s)	458, 702, 720, 802
TseFI	GTSAC	3 cut(s)	113, 121, 641
TseI	GCWGC	2 cut(s)	5, 320
Tsp45I	GTSAC	3 cut(s)	113, 121, 641
TspDTI	ATGAA	5 cut(s)	173, 290, 376, 549, 602
VpaK11BI	GGWCC	2 cut(s)	230, 476
XapI	RAATTY	2 cut(s)	312, 668
XcmI	CCANNNNNNNNNTGG	3 cut(s)	408, 523, 775
XhoI	CTCGAG	1 cut(s)	101
XmnI	GAANNNNTTC	1 cut(s)	593
XspI	CTAG	3 cut(s)	47, 185, 416
ZrmI	AGTACT	2 cut(s)	194, 485

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.