Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23590 AT2G23600 AT2G23600 AT2G23600 AT2G23610 AT2G23610 AT2G23620 |
| fragaria_vesca | FvH4_1g14820 |
| malus_domestica | MD02G1161400.v1.1 MD02G1161600.v1.1 MD15G1275500.v1.1 MD15G1275800.v1.1 |
| prunus_persica | Prupe.7G142100_v2.0.a1 Prupe.7G142200_v2.0.a1 Prupe.7G142200_v2.0.a1 |
| pyrus_communis | pycom02g12750 pycom15g23850 pycom15g23860 |
| rosa_chinensis | RchiOBHm_Chr1g0329881 RchiOBHm_Chr2g0103791 |
| rosa_laevigata | RLG00000017260 RLG00000017263 RLG00000029860 |
| rosa_multiflora | Rmu_sc0000112.1_g000011 Rmu_sc0000112.1_g000026 Rmu_sc0002081.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00139360 Rroxscaffold_2G00139380 Rroxscaffold_4G00320540 Rroxscaffold_7G00215680 |
| rosa_rugosa | Rorug01G0084000 Rorug02G0117300 |
| rosa_samantha | Rh1AG101900 Rh1BG081100 Rh1CG097400 Rh1DG105000 Rh2AG166300 Rh2BG173500 Rh2CG172200 Rh2DG171700 |
| rosa_wichuraiana | Rw1G008060 Rw1G008110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 471 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 162 |
| AciI | CCGC | 3 cut(s) | 80, 86, 235 |
| AcsI | RAATTY | 1 cut(s) | 345 |
| AfaI | GTAC | 1 cut(s) | 488 |
| AfeI | AGCGCT | 1 cut(s) | 176 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 162 |
| AgsI | TTSAA | 2 cut(s) | 280, 397 |
| AjnI | CCWGG | 1 cut(s) | 155 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 336, 368 |
| AluBI | AGCT | 1 cut(s) | 441 |
| AluI | AGCT | 1 cut(s) | 441 |
| Alw21I | GWGCWC | 1 cut(s) | 195 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 162 |
| Aor51HI | AGCGCT | 1 cut(s) | 176 |
| ApeKI | GCWGC | 4 cut(s) | 203, 215, 218, 438 |
| ApoI | RAATTY | 1 cut(s) | 345 |
| AspLEI | GCGC | 3 cut(s) | 177, 317, 438 |
| AsuHPI | GGTGA | 1 cut(s) | 60 |
| BanII | GRGCYC | 1 cut(s) | 235 |
| BbsI | GAAGAC | 2 cut(s) | 258, 294 |
| Bbv12I | GWGCWC | 1 cut(s) | 195 |
| BbvI | GCAGC | 4 cut(s) | 202, 215, 230, 450 |
| BccI | CCATC | 3 cut(s) | 79, 290, 305 |
| BciT130I | CCWGG | 1 cut(s) | 157 |
| BfmI | CTRYAG | 2 cut(s) | 216, 256 |
| BfoI | RGCGCY | 1 cut(s) | 178 |
| BglII | AGATCT | 1 cut(s) | 260 |
| BisI | GCNGC | 4 cut(s) | 204, 216, 219, 439 |
| BlsI | GCNGC | 4 cut(s) | 205, 217, 220, 440 |
| Bme1390I | CCNGG | 1 cut(s) | 157 |
| BmiI | GGNNCC | 1 cut(s) | 423 |
| BmrFI | CCNGG | 1 cut(s) | 157 |
| BpiI | GAAGAC | 2 cut(s) | 258, 294 |
| BsaJI | CCNNGG | 2 cut(s) | 101, 417 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 162 |
| Bse1I | ACTGG | 1 cut(s) | 371 |
| BseBI | CCWGG | 1 cut(s) | 157 |
| BseDI | CCNNGG | 2 cut(s) | 101, 417 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 162 |
| BseNI | ACTGG | 1 cut(s) | 371 |
| BseRI | GAGGAG | 5 cut(s) | 188, 200, 203, 284, 471 |
| BseXI | GCAGC | 4 cut(s) | 202, 215, 230, 450 |
| BsiHKAI | GWGCWC | 1 cut(s) | 195 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 162 |
| Bsp1286I | GDGCHC | 2 cut(s) | 195, 235 |
| Bsp143I | GATC | 2 cut(s) | 207, 260 |
| BspACI | CCGC | 3 cut(s) | 80, 86, 235 |
| BspLI | GGNNCC | 1 cut(s) | 423 |
| BspMAI | CTGCAG | 1 cut(s) | 220 |
| BsrI | ACTGG | 1 cut(s) | 371 |
| BssECI | CCNNGG | 2 cut(s) | 101, 417 |
| BssMI | GATC | 2 cut(s) | 207, 260 |
| BssT1I | CCWWGG | 2 cut(s) | 101, 417 |
| Bst2UI | CCWGG | 1 cut(s) | 157 |
| BstC8I | GCNNGC | 2 cut(s) | 223, 235 |
| BstH2I | RGCGCY | 1 cut(s) | 178 |
| BstHHI | GCGC | 3 cut(s) | 177, 317, 438 |
| BstKTI | GATC | 2 cut(s) | 210, 263 |
| BstMBI | GATC | 2 cut(s) | 207, 260 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 19, 212 |
| BstNI | CCWGG | 1 cut(s) | 157 |
| BstSCI | CCNGG | 1 cut(s) | 155 |
| BstSFI | CTRYAG | 2 cut(s) | 216, 256 |
| BstV1I | GCAGC | 4 cut(s) | 202, 215, 230, 450 |
| BstV2I | GAAGAC | 2 cut(s) | 258, 294 |
| BstX2I | RGATCY | 1 cut(s) | 260 |
| BstYI | RGATCY | 1 cut(s) | 260 |
| BtgZI | GCGATG | 1 cut(s) | 57 |
| Cac8I | GCNNGC | 2 cut(s) | 223, 235 |
| CaiI | CAGNNNCTG | 1 cut(s) | 162 |
| CfoI | GCGC | 3 cut(s) | 177, 317, 438 |
| CseI | GACGC | 1 cut(s) | 175 |
| Csp6I | GTAC | 1 cut(s) | 487 |
| CviJI | RGCY | 7 cut(s) | 113, 215, 233, 403, 424, 441, 475 |
| CviKI_1 | RGCY | 7 cut(s) | 113, 215, 233, 403, 424, 441, 475 |
| CviQI | GTAC | 1 cut(s) | 487 |
| DpnI | GATC | 2 cut(s) | 209, 262 |
| DpnII | GATC | 2 cut(s) | 207, 260 |
| EciI | GGCGGA | 1 cut(s) | 75 |
| Eco130I | CCWWGG | 2 cut(s) | 101, 417 |
| Eco24I | GRGCYC | 1 cut(s) | 235 |
| Eco47III | AGCGCT | 1 cut(s) | 176 |
| EcoRII | CCWGG | 1 cut(s) | 155 |
| EcoT14I | CCWWGG | 2 cut(s) | 101, 417 |
| EcoT22I | ATGCAT | 1 cut(s) | 391 |
| EcoT38I | GRGCYC | 1 cut(s) | 235 |
| ErhI | CCWWGG | 2 cut(s) | 101, 417 |
| FaiI | YATR | 3 cut(s) | 387, 391, 471 |
| FauI | CCCGC | 1 cut(s) | 242 |
| Fnu4HI | GCNGC | 4 cut(s) | 204, 216, 219, 439 |
| FriOI | GRGCYC | 1 cut(s) | 235 |
| Fsp4HI | GCNGC | 4 cut(s) | 204, 216, 219, 439 |
| GlaI | GCGC | 3 cut(s) | 176, 316, 437 |
| GluI | GCNGC | 4 cut(s) | 204, 216, 219, 439 |
| HaeII | RGCGCY | 1 cut(s) | 178 |
| HgaI | GACGC | 1 cut(s) | 175 |
| HhaI | GCGC | 3 cut(s) | 177, 317, 438 |
| Hin6I | GCGC | 3 cut(s) | 175, 315, 436 |
| HinP1I | GCGC | 3 cut(s) | 175, 315, 436 |
| HinfI | GANTC | 2 cut(s) | 272, 413 |
| HphI | GGTGA | 1 cut(s) | 60 |
| Hpy166II | GTNNAC | 1 cut(s) | 372 |
| Hpy188I | TCNGA | 2 cut(s) | 120, 247 |
| Hpy188III | TCNNGA | 1 cut(s) | 163 |
| Hpy8I | GTNNAC | 1 cut(s) | 372 |
| HpyCH4V | TGCA | 2 cut(s) | 218, 389 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 19, 212 |
| HspAI | GCGC | 3 cut(s) | 175, 315, 436 |
| Kzo9I | GATC | 2 cut(s) | 207, 260 |
| LmnI | GCTCC | 3 cut(s) | 190, 421, 446 |
| LpnPI | CCDG | 7 cut(s) | 8, 142, 148, 169, 352, 413, 417 |
| Lsp1109I | GCAGC | 4 cut(s) | 202, 215, 230, 450 |
| MaeIII | GTNAC | 2 cut(s) | 41, 136 |
| MalI | GATC | 2 cut(s) | 209, 262 |
| MboI | GATC | 2 cut(s) | 207, 260 |
| MboII | GAAGA | 3 cut(s) | 16, 263, 299 |
| MflI | RGATCY | 1 cut(s) | 260 |
| MhlI | GDGCHC | 2 cut(s) | 195, 235 |
| MluCI | AATT | 3 cut(s) | 15, 345, 457 |
| MlyI | GAGTC | 1 cut(s) | 281 |
| MmeI | TCCRAC | 1 cut(s) | 334 |
| Mph1103I | ATGCAT | 1 cut(s) | 391 |
| MseI | TTAA | 2 cut(s) | 180, 511 |
| MspR9I | CCNGG | 1 cut(s) | 157 |
| MvaI | CCWGG | 1 cut(s) | 157 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 19, 212 |
| NdeII | GATC | 2 cut(s) | 207, 260 |
| NlaIV | GGNNCC | 1 cut(s) | 423 |
| NmuCI | GTSAC | 2 cut(s) | 41, 136 |
| NsiI | ATGCAT | 1 cut(s) | 391 |
| PfeI | GAWTC | 1 cut(s) | 413 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 162 |
| PkrI | GCNGC | 4 cut(s) | 205, 217, 220, 440 |
| PleI | GAGTC | 1 cut(s) | 280 |
| PpsI | GAGTC | 1 cut(s) | 280 |
| PsiI | TTATAA | 1 cut(s) | 471 |
| Psp6I | CCWGG | 1 cut(s) | 155 |
| PspGI | CCWGG | 1 cut(s) | 155 |
| PspN4I | GGNNCC | 1 cut(s) | 423 |
| PstI | CTGCAG | 1 cut(s) | 220 |
| PstNI | CAGNNNCTG | 1 cut(s) | 162 |
| PsuI | RGATCY | 1 cut(s) | 260 |
| RsaI | GTAC | 1 cut(s) | 488 |
| RsaNI | GTAC | 1 cut(s) | 487 |
| SaqAI | TTAA | 2 cut(s) | 180, 511 |
| SatI | GCNGC | 4 cut(s) | 204, 216, 219, 439 |
| Sau3AI | GATC | 2 cut(s) | 207, 260 |
| SchI | GAGTC | 1 cut(s) | 281 |
| ScrFI | CCNGG | 1 cut(s) | 157 |
| SduI | GDGCHC | 2 cut(s) | 195, 235 |
| SetI | ASST | 5 cut(s) | 107, 161, 198, 443, 497 |
| SfcI | CTRYAG | 2 cut(s) | 216, 256 |
| Sse9I | AATT | 3 cut(s) | 15, 345, 457 |
| SsiI | CCGC | 3 cut(s) | 80, 86, 235 |
| StyD4I | CCNGG | 1 cut(s) | 155 |
| StyI | CCWWGG | 2 cut(s) | 101, 417 |
| TasI | AATT | 3 cut(s) | 15, 345, 457 |
| TfiI | GAWTC | 1 cut(s) | 413 |
| Tru1I | TTAA | 2 cut(s) | 180, 511 |
| Tru9I | TTAA | 2 cut(s) | 180, 511 |
| TseFI | GTSAC | 2 cut(s) | 41, 136 |
| TseI | GCWGC | 4 cut(s) | 203, 215, 218, 438 |
| Tsp45I | GTSAC | 2 cut(s) | 41, 136 |
| TspDTI | ATGAA | 5 cut(s) | 17, 23, 54, 300, 357 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 162 |
| XapI | RAATTY | 1 cut(s) | 345 |
| Zsp2I | ATGCAT | 1 cut(s) | 391 |