Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002337

Physical Location & Seq

Genomic Coordinates Reverse (-)

10044179 .. 10046982

Gene Structure 2804 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G23610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 792 bp

ATGAGTGAGGAGGAGAGGAAGCAACACGTCGTTCTAGTACATGGTGCTTGCCATGGCGCCTGGTGCTGGTACAAGGTTAAGCCGCAGCTCGAGGCTTCTGGCCACCGCGTAACCGCCGTAGATCTAGCTGCCTCCGGTATAGACATGACCAGGTCAATCACAGATATATCCACATGCGAACAATACTCAGAGCCATTGATGCAGCTAATGACCTCACTACCAGATGATGAGAAGGTTGTGCTTGTTGGTCATAGCTTAGGAGGTTTGAGTTTAGCTATGGCCATGGATATGTTTCCGACCAAAATCTCTGTTTCTGTCTTTGTGACTGCTATGATGCCAGACACCAAACACTCACCATCCTTCGTATGGGATAAGCTAAGAAAAGAAACTTCACGAGAGGAATGGTTAGACACCGTGTTTACGAGCGAGAAACCTGATTTTCCTAGCGAGTTTTGGATTTTTGGACCAGAATTCATGGCCAAGAACTTGTATCAGTTGTCTCCAGTCCAAGATCTTGAATTGGCGAAAATGTTGGTGAGGGCAAACCCATTGATTAAGAAAGATATGGCAGAGAGAAGAAGCTTCAGTGAGGAAGGATACGGATCCGTTACACGTATATTTATTGTATGCGGAAAGGATCTTGTGTCACCCGAAGATTACCAGCGATCGATGATCAGCAACTTTCCCCCAAAAGAAGTAATGGAGATCAAAGACGCAGATCATATGCCAATGTTCTCCAAGCCTCAACAACTATGTGCTCTTCTCTTGGAGATTGCAAATAAATATGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0006082 GO:0006725 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009056 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009627 GO:0009696 GO:0009814 GO:0009817 GO:0009987 GO:0010817 GO:0016137 GO:0016139 GO:0016787 GO:0016788 GO:0016829 GO:0016830 GO:0016832 GO:0016999 GO:0017144 GO:0018958 GO:0019752 GO:0032787 GO:0042445 GO:0042537 GO:0043207 GO:0043436 GO:0044237 GO:0044281 GO:0045087 GO:0046593 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0052689 GO:0065007 GO:0065008 GO:0071704 GO:0080030 GO:0080031 GO:0080032 GO:0098542 GO:1901135 GO:1901136 GO:1901360 GO:1901575 GO:1901615 GO:1901657 GO:1901658

KEGG Pathways

Metabolic & Signaling

ko00460 ko01110 map00460 map01110

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6

Protein Analysis

263

Amino Acids

29.82

Weight (kDa)

5.33

Isoelectric Point (pI)

47.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hydrolase_4	PF12146	5 - 118	2.6e-07	Serine aminopeptidase, S33
Abhydrolase_1	PF00561	9 - 248	7.1e-19	alpha/beta hydrolase fold
Abhydrolase_6	PF12697	10 - 253	3.9e-24	Alpha/beta hydrolase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23590 AT2G23600 AT2G23600 AT2G23600 AT2G23610 AT2G23610 AT2G23620
fragaria_vesca	FvH4_1g14820
malus_domestica	MD02G1161400.v1.1 MD02G1161600.v1.1 MD15G1275500.v1.1 MD15G1275800.v1.1
prunus_persica	Prupe.7G142100_v2.0.a1 Prupe.7G142200_v2.0.a1 Prupe.7G142200_v2.0.a1
pyrus_communis	pycom02g12750 pycom15g23850 pycom15g23860
rosa_chinensis	RchiOBHm_Chr1g0329881 RchiOBHm_Chr2g0103791
rosa_laevigata	RLG00000017260 RLG00000017263 RLG00000029860
rosa_multiflora	Rmu_sc0000112.1_g000011 Rmu_sc0000112.1_g000026 Rmu_sc0002081.1_g000001
rosa_roxburghii	Rroxscaffold_2G00139360 Rroxscaffold_2G00139380 Rroxscaffold_4G00320540 Rroxscaffold_7G00215680
rosa_rugosa	Rorug01G0084000 Rorug02G0117300
rosa_samantha	Rh1AG101900 Rh1BG081100 Rh1CG097400 Rh1DG105000 Rh2AG166300 Rh2BG173500 Rh2CG172200 Rh2DG171700
rosa_wichuraiana	Rw1G008060 Rw1G008110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	56
AccII	CGCG	1 cut(s)	108
AciI	CCGC	4 cut(s)	83, 106, 114, 630
AclWI	GGATC	3 cut(s)	597, 610, 645
AcoI	YGGCCR	3 cut(s)	100, 279, 477
AcsI	RAATTY	1 cut(s)	470
AcuI	CTGAAG	1 cut(s)	568
AcyI	GRCGYC	1 cut(s)	57
AfaI	GTAC	2 cut(s)	39, 71
AfiI	CCNNNNNNNGG	2 cut(s)	66, 366
AflIII	ACRYGT	2 cut(s)	25, 611
AgsI	TTSAA	1 cut(s)	518
AjiI	CACGTC	1 cut(s)	28
AjnI	CCWGG	2 cut(s)	59, 149
AluBI	AGCT	7 cut(s)	88, 128, 205, 255, 275, 376, 582
AluI	AGCT	7 cut(s)	88, 128, 205, 255, 275, 376, 582
Alw21I	GWGCWC	1 cut(s)	760
Alw26I	GTCTC	1 cut(s)	504
AlwI	GGATC	3 cut(s)	597, 610, 645
Ama87I	CYCGRG	1 cut(s)	89
AoxI	GGCC	3 cut(s)	100, 279, 477
ApeKI	GCWGC	3 cut(s)	85, 128, 202
ApoI	RAATTY	1 cut(s)	470
AspLEI	GCGC	1 cut(s)	59
AspS9I	GGNCC	1 cut(s)	464
AsuHPI	GGTGA	3 cut(s)	345, 547, 639
AvaI	CYCGRG	1 cut(s)	89
AvaII	GGWCC	1 cut(s)	464
BalI	TGGCCA	3 cut(s)	102, 281, 479
BamHI	GGATCC	1 cut(s)	602
BanI	GGYRCC	1 cut(s)	56
BauI	CACGAG	1 cut(s)	393
Bbv12I	GWGCWC	1 cut(s)	760
BbvI	GCAGC	3 cut(s)	97, 115, 214
BccI	CCATC	1 cut(s)	364
BceAI	ACGGC	1 cut(s)	101
BciT130I	CCWGG	2 cut(s)	61, 151
BciVI	GTATCC	1 cut(s)	590
BclI	TGATCA	1 cut(s)	672
BcoDI	GTCTC	1 cut(s)	504
BfaI	CTAG	3 cut(s)	35, 125, 444
BfoI	RGCGCY	1 cut(s)	60
BfuI	GTATCC	1 cut(s)	590
BglII	AGATCT	2 cut(s)	121, 511
BisI	GCNGC	4 cut(s)	83, 86, 129, 203
BlsI	GCNGC	4 cut(s)	84, 87, 130, 204
Bme1390I	CCNGG	2 cut(s)	61, 151
Bme18I	GGWCC	1 cut(s)	464
BmeT110I	CYCGRG	1 cut(s)	89
BmgBI	CACGTC	1 cut(s)	28
BmgT120I	GGNCC	1 cut(s)	464
BmiI	GGNNCC	2 cut(s)	58, 604
BmrFI	CCNGG	2 cut(s)	61, 151
BmsI	GCATC	2 cut(s)	189, 324
BpmI	CTGGAG	1 cut(s)	486
Bpu10I	CCTNAGC	1 cut(s)	256
Bsa29I	ATCGAT	1 cut(s)	668
BsaAI	YACGTR	1 cut(s)	614
BsaBI	GATNNNNATC	1 cut(s)	601
BsaHI	GRCGYC	1 cut(s)	57
BsaJI	CCNNGG	2 cut(s)	52, 282
BsaWI	WCCGGW	1 cut(s)	134
Bsc4I	CCNNNNNNNGG	2 cut(s)	66, 366
Bse1I	ACTGG	1 cut(s)	503
Bse8I	GATNNNNATC	1 cut(s)	601
BseBI	CCWGG	2 cut(s)	61, 151
BseCI	ATCGAT	1 cut(s)	668
BseDI	CCNNGG	2 cut(s)	52, 282
BseGI	GGATG	1 cut(s)	356
BseJI	GATNNNNATC	1 cut(s)	601
BseLI	CCNNNNNNNGG	2 cut(s)	66, 366
BseMII	CTCAG	1 cut(s)	201
BseNI	ACTGG	1 cut(s)	503
BseRI	GAGGAG	2 cut(s)	23, 26
BseXI	GCAGC	3 cut(s)	97, 115, 214
Bsh1236I	CGCG	1 cut(s)	108
Bsh1285I	CGRYCG	1 cut(s)	668
BshFI	GGCC	3 cut(s)	102, 281, 479
BshNI	GGYRCC	1 cut(s)	56
BshVI	ATCGAT	1 cut(s)	668
BsiEI	CGRYCG	1 cut(s)	668
BsiHKAI	GWGCWC	1 cut(s)	760
BsiHKCI	CYCGRG	1 cut(s)	89
BsiSI	CCGG	1 cut(s)	135
BslI	CCNNNNNNNGG	2 cut(s)	66, 366
BsmAI	GTCTC	1 cut(s)	504
BsnI	GGCC	3 cut(s)	102, 281, 479
BsoBI	CYCGRG	1 cut(s)	89
Bsp1286I	GDGCHC	1 cut(s)	760
Bsp143I	GATC	8 cut(s)	121, 511, 602, 637, 665, 672, 705, 718
Bsp19I	CCATGG	2 cut(s)	52, 282
BspACI	CCGC	4 cut(s)	83, 106, 114, 630
BspANI	GGCC	3 cut(s)	102, 281, 479
BspCNI	CTCAG	1 cut(s)	200
BspDI	ATCGAT	1 cut(s)	668
BspFNI	CGCG	1 cut(s)	108
BspLI	GGNNCC	2 cut(s)	58, 604
BspPI	GGATC	3 cut(s)	597, 610, 645
BspQI	GCTCTTC	1 cut(s)	765
BspT107I	GGYRCC	1 cut(s)	56
BsrI	ACTGG	1 cut(s)	503
BssECI	CCNNGG	2 cut(s)	52, 282
BssMI	GATC	8 cut(s)	121, 511, 602, 637, 665, 672, 705, 718
BssNI	GRCGYC	1 cut(s)	57
BssSI	CACGAG	1 cut(s)	393
BssT1I	CCWWGG	2 cut(s)	52, 282
Bst2BI	CACGAG	1 cut(s)	393
Bst2UI	CCWGG	2 cut(s)	61, 151
Bst4CI	ACNGT	1 cut(s)	415
Bst6I	CTCTTC	1 cut(s)	765
BstACI	GRCGYC	1 cut(s)	57
BstBAI	YACGTR	1 cut(s)	614
BstC8I	GCNNGC	1 cut(s)	49
BstDEI	CTNAG	3 cut(s)	187, 256, 377
BstDSI	CCRYGG	2 cut(s)	52, 282
BstF5I	GGATG	1 cut(s)	356
BstFNI	CGCG	1 cut(s)	108
BstH2I	RGCGCY	1 cut(s)	60
BstHHI	GCGC	1 cut(s)	59
BstKTI	GATC	8 cut(s)	124, 514, 605, 640, 668, 675, 708, 721
BstMAI	GTCTC	1 cut(s)	504
BstMBI	GATC	8 cut(s)	121, 511, 602, 637, 665, 672, 705, 718
BstMCI	CGRYCG	1 cut(s)	668
BstMWI	GCNNNNNNNGC	2 cut(s)	63, 199
BstNI	CCWGG	2 cut(s)	61, 151
BstNSI	RCATGY	1 cut(s)	177
BstSCI	CCNGG	2 cut(s)	59, 149
BstUI	CGCG	1 cut(s)	108
BstV1I	GCAGC	3 cut(s)	97, 115, 214
BstX2I	RGATCY	4 cut(s)	121, 511, 602, 637
BstYI	RGATCY	4 cut(s)	121, 511, 602, 637
Bsu15I	ATCGAT	1 cut(s)	668
BsuI	GTATCC	1 cut(s)	590
BsuRI	GGCC	3 cut(s)	102, 281, 479
BsuTUI	ATCGAT	1 cut(s)	668
BtgI	CCRYGG	2 cut(s)	52, 282
BtrI	CACGTC	1 cut(s)	28
BtsCI	GGATG	1 cut(s)	356
BtsIMutI	CAGTG	1 cut(s)	592
Cac8I	GCNNGC	1 cut(s)	49
CfoI	GCGC	1 cut(s)	59
Cfr13I	GGNCC	1 cut(s)	464
ClaI	ATCGAT	1 cut(s)	668
CseI	GACGC	1 cut(s)	722
CsiI	ACCWGGT	1 cut(s)	149
Csp6I	GTAC	2 cut(s)	38, 70
CviAII	CATG	6 cut(s)	41, 53, 145, 174, 283, 475
CviQI	GTAC	2 cut(s)	38, 70
DdeI	CTNAG	3 cut(s)	187, 256, 377
DinI	GGCGCC	1 cut(s)	58
DpnI	GATC	8 cut(s)	123, 513, 604, 639, 667, 674, 707, 720
DpnII	GATC	8 cut(s)	121, 511, 602, 637, 665, 672, 705, 718
EaeI	YGGCCR	3 cut(s)	100, 279, 477
Eam1104I	CTCTTC	1 cut(s)	765
EarI	CTCTTC	1 cut(s)	765
Eco130I	CCWWGG	2 cut(s)	52, 282
Eco47I	GGWCC	1 cut(s)	464
Eco57I	CTGAAG	1 cut(s)	568
Eco88I	CYCGRG	1 cut(s)	89
EcoRI	GAATTC	1 cut(s)	470
EcoRII	CCWGG	2 cut(s)	59, 149
EcoT14I	CCWWGG	2 cut(s)	52, 282
EgeI	GGCGCC	1 cut(s)	58
EheI	GGCGCC	1 cut(s)	58
ErhI	CCWWGG	2 cut(s)	52, 282
FaeI	CATG	6 cut(s)	44, 56, 148, 177, 286, 478
FatI	CATG	6 cut(s)	40, 52, 144, 173, 282, 474
FauNDI	CATATG	1 cut(s)	723
FbaI	TGATCA	1 cut(s)	672
Fnu4HI	GCNGC	4 cut(s)	83, 86, 129, 203
FokI	GGATG	1 cut(s)	343
Fsp4HI	GCNGC	4 cut(s)	83, 86, 129, 203
FspBI	CTAG	3 cut(s)	35, 125, 444
GlaI	GCGC	1 cut(s)	58
GluI	GCNGC	4 cut(s)	83, 86, 129, 203
GsuI	CTGGAG	1 cut(s)	486
HaeII	RGCGCY	1 cut(s)	60
HaeIII	GGCC	3 cut(s)	102, 281, 479
HapII	CCGG	1 cut(s)	135
HgaI	GACGC	1 cut(s)	722
HhaI	GCGC	1 cut(s)	59
Hin1I	GRCGYC	1 cut(s)	57
Hin1II	CATG	6 cut(s)	44, 56, 148, 177, 286, 478
Hin6I	GCGC	1 cut(s)	57
HinP1I	GCGC	1 cut(s)	57
HindIII	AAGCTT	1 cut(s)	580
HpaII	CCGG	1 cut(s)	135
HphI	GGTGA	3 cut(s)	345, 547, 639
Hpy166II	GTNNAC	1 cut(s)	420
Hpy188I	TCNGA	2 cut(s)	190, 297
Hpy188III	TCNNGA	2 cut(s)	393, 515
Hpy8I	GTNNAC	1 cut(s)	420
Hpy99I	CGWCG	1 cut(s)	32
HpyAV	CCTTC	3 cut(s)	226, 370, 587
HpyCH4III	ACNGT	1 cut(s)	415
HpyCH4IV	ACGT	2 cut(s)	27, 613
HpyCH4V	TGCA	2 cut(s)	202, 776
HpyF10VI	GCNNNNNNNGC	2 cut(s)	63, 199
HpyF3I	CTNAG	3 cut(s)	187, 256, 377
HpySE526I	ACGT	2 cut(s)	27, 613
Hsp92I	GRCGYC	1 cut(s)	57
Hsp92II	CATG	6 cut(s)	44, 56, 148, 177, 286, 478
HspAI	GCGC	1 cut(s)	57
KasI	GGCGCC	1 cut(s)	56
Ksp22I	TGATCA	1 cut(s)	672
Kzo9I	GATC	8 cut(s)	121, 511, 602, 637, 665, 672, 705, 718
LguI	GCTCTTC	1 cut(s)	765
Lsp1109I	GCAGC	3 cut(s)	97, 115, 214
LweI	GCATC	2 cut(s)	189, 324
MabI	ACCWGGT	1 cut(s)	149
MaeI	CTAG	3 cut(s)	35, 125, 444
MaeII	ACGT	2 cut(s)	27, 613
MaeIII	GTNAC	4 cut(s)	109, 322, 607, 645
MalI	GATC	8 cut(s)	123, 513, 604, 639, 667, 674, 707, 720
MboI	GATC	8 cut(s)	121, 511, 602, 637, 665, 672, 705, 718
MboII	GAAGA	3 cut(s)	588, 665, 752
MflI	RGATCY	4 cut(s)	121, 511, 602, 637
MhlI	GDGCHC	1 cut(s)	760
MlsI	TGGCCA	3 cut(s)	102, 281, 479
MluCI	AATT	2 cut(s)	470, 518
MluNI	TGGCCA	3 cut(s)	102, 281, 479
Mly113I	GGCGCC	1 cut(s)	57
MmeI	TCCRAC	1 cut(s)	320
Mox20I	TGGCCA	3 cut(s)	102, 281, 479
MscI	TGGCCA	3 cut(s)	102, 281, 479
MseI	TTAA	2 cut(s)	78, 555
MslI	CAYNNNNRTG	1 cut(s)	287
Msp20I	TGGCCA	3 cut(s)	102, 281, 479
MspI	CCGG	1 cut(s)	135
MspR9I	CCNGG	2 cut(s)	61, 151
MvaI	CCWGG	2 cut(s)	61, 151
MvnI	CGCG	1 cut(s)	108
MwoI	GCNNNNNNNGC	2 cut(s)	63, 199
NarI	GGCGCC	1 cut(s)	57
NcoI	CCATGG	2 cut(s)	52, 282
NdeI	CATATG	1 cut(s)	723
NdeII	GATC	8 cut(s)	121, 511, 602, 637, 665, 672, 705, 718
NlaIII	CATG	6 cut(s)	44, 56, 148, 177, 286, 478
NlaIV	GGNNCC	2 cut(s)	58, 604
NmuCI	GTSAC	2 cut(s)	322, 645
NspI	RCATGY	1 cut(s)	177
PaeR7I	CTCGAG	1 cut(s)	89
PciSI	GCTCTTC	1 cut(s)	765
PflFI	GACNNNGTC	1 cut(s)	151
PkrI	GCNGC	4 cut(s)	84, 87, 130, 204
Ple19I	CGATCG	1 cut(s)	668
PluTI	GGCGCC	1 cut(s)	60
Ppu21I	YACGTR	1 cut(s)	614
Psp6I	CCWGG	2 cut(s)	59, 149
PspGI	CCWGG	2 cut(s)	59, 149
PspN4I	GGNNCC	2 cut(s)	58, 604
PspPI	GGNCC	1 cut(s)	464
PspXI	VCTCGAGB	1 cut(s)	89
PsuI	RGATCY	4 cut(s)	121, 511, 602, 637
PsyI	GACNNNGTC	1 cut(s)	151
PvuI	CGATCG	1 cut(s)	668
RsaI	GTAC	2 cut(s)	39, 71
RsaNI	GTAC	2 cut(s)	38, 70
RseI	CAYNNNNRTG	1 cut(s)	287
SapI	GCTCTTC	1 cut(s)	765
SaqAI	TTAA	2 cut(s)	78, 555
SatI	GCNGC	4 cut(s)	83, 86, 129, 203
Sau3AI	GATC	8 cut(s)	121, 511, 602, 637, 665, 672, 705, 718
Sau96I	GGNCC	1 cut(s)	464
ScrFI	CCNGG	2 cut(s)	61, 151
SduI	GDGCHC	1 cut(s)	760
SexAI	ACCWGGT	1 cut(s)	149
SfaNI	GCATC	2 cut(s)	189, 324
SfoI	GGCGCC	1 cut(s)	58
Sfr274I	CTCGAG	1 cut(s)	89
SinI	GGWCC	1 cut(s)	464
SlaI	CTCGAG	1 cut(s)	89
SmiMI	CAYNNNNRTG	1 cut(s)	287
SmlI	CTYRAG	1 cut(s)	89
SmoI	CTYRAG	1 cut(s)	89
Sse9I	AATT	2 cut(s)	470, 518
SsiI	CCGC	4 cut(s)	83, 106, 114, 630
SspDI	GGCGCC	1 cut(s)	56
SspMI	CTAG	3 cut(s)	35, 125, 444
StyD4I	CCNGG	2 cut(s)	59, 149
StyI	CCWWGG	2 cut(s)	52, 282
TaaI	ACNGT	1 cut(s)	415
TaiI	ACGT	2 cut(s)	30, 616
TaqI	TCGA	2 cut(s)	90, 668
TasI	AATT	2 cut(s)	470, 518
TatI	WGTACW	1 cut(s)	37
TauI	GCSGC	1 cut(s)	85
Tru1I	TTAA	2 cut(s)	78, 555
Tru9I	TTAA	2 cut(s)	78, 555
TscAI	CASTG	1 cut(s)	592
TseFI	GTSAC	2 cut(s)	322, 645
TseI	GCWGC	3 cut(s)	85, 128, 202
Tsp45I	GTSAC	2 cut(s)	322, 645
TspDTI	ATGAA	1 cut(s)	463
TspGWI	ACGGA	2 cut(s)	595, 615
TspRI	CASTG	1 cut(s)	592
Tth111I	GACNNNGTC	1 cut(s)	151
VpaK11BI	GGWCC	1 cut(s)	464
XapI	RAATTY	1 cut(s)	470
XceI	RCATGY	1 cut(s)	177
XcmI	CCANNNNNNNNNTGG	1 cut(s)	363
XhoI	CTCGAG	1 cut(s)	89
XspI	CTAG	3 cut(s)	35, 125, 444

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.