AT2G27050

ETHYLENE INSENSITIVE 3-like

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
11545656 .. 11548293
2638 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G27050.1

Sequence Viewer

Length: 1755 bp
ATGATGATGTTTAACGAGATGGGAATGTATGGAAACATGGATTTCTTCTCTTCCTCCACATCTCTCGATGTGTGTCCATTACCACAAGCTGAACAAGAACCTGTAGTTGAAGATGTCGACTACACCGATGATGAGATGGATGTGGATGAGCTTGAGAAGAGGATGTGGAGAGACAAAATGCGTTTGAAACGTCTCAAGGAGCAACAGAGTAAGTGTAAAGAAGGCGTCGATGGTTCGAAACAGAGGCAGTCGCAAGAGCAAGCTAGGAGGAAGAAAATGTCTAGAGCCCAAGATGGGATCTTGAAGTATATGTTGAAGATGATGGAAGTTTGTAAAGCTCAAGGCTTTGTTTATGGTATTATTCCTGAGAAGGGTAAGCCTGTGACTGGTGCTTCGGATAATTTGAGGGAATGGTGGAAAGATAAGGTTAGGTTTGATCGTAATGGTCCAGCTGCTATTGCTAAGTATCAGTCAGAGAATAATATTTCTGGAGGGAGTAATGATTGTAACAGCTTGGTTGGTCCAACACCGCATACGCTTCAGGAGCTTCAGGACACGACTCTTGGTTCGCTTTTATCGGCTTTGATGCAACATTGTGATCCACCGCAGAGACGGTTTCCTTTGGAGAAAGGAGTTTCTCCACCTTGGTGGCCTAATGGGAATGAAGAGTGGTGGCCTCAGCTTGGTTTACCAAATGAGCAAGGTCCTCCTCCTTATAAGAAGCCTCATGATTTGAAGAAAGCTTGGAAAGTCGGTGTTTTAACTGCGGTGATCAAGCATATGTCGCCGGATATTGCGAAGATCCGTAAGCTTGTGAGGCAATCAAAATGCTTGCAGGATAAGATGACGGCGAAAGAGAGTGCTACTTGGCTTGCCATTATTAACCAAGAAGAGGTTGTGGCTCGGGAGCTTTATCCCGAGTCATGCCCTCCTCTTTCTTCTTCTTCATCATTAGGAAGCGGGTCGCTTCTCATTAATGATTGTAGCGAGTATGACGTTGAAGGTTTCGAGAAGGAACAACATGGTTTCGATGTGGAAGAGCGGAAACCAGAGATAGTGATGATGCATCCTCTAGCAAGCTTTGGGGTTGCTAAAATGCAACATTTTCCCATAAAGGAGGAGGTCGCCACCACGGTAAACTTAGAGTTCACGAGAAAGAGGAAGCAGAACAATGATATGAATGTTATGGTAATGGACAGATCAGCAGGTTACACTTGTGAGAATGGTCAGTGTCCTCACAGCAAAATGAATCTTGGATTTCAAGACAGGAGTTCAAGGGACAACCACCAGATGGTTTGTCCATATAGAGACAATCGTTTAGCGTATGGAGCATCCAAGTTTCATATGGGTGGAATGAAACTAGTAGTTCCTCAGCAACCAGTCCAACCGATCGACCTATCGGGCGTTGGAGTTCCGGAAAACGGGCAGAAGATGATCACCGAGCTTATGGCCATGTACGACAGAAATGTCCAAAGCAACCAAACGCCTCCTACTTTGATGGAAAACCAAAGCATGGTCATTGATGCAAAAGCAGCTCAGAATCAGCAGCTGAATTTCAACAGTGGCAATCAAATGTTTATGCAACAAGGGACGAACAACGGGGTTAACAATCGGTTCCAGATGGTGTTTGATTCGACACCATTCGATATGGCAGCATTCGATTACAGAGATGATTGGCAAACCGGAGCAATGGAAGGAATGGGGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGATGTATCAATATGGTTCTGA

Protein Analysis

584

Amino Acids

66.49

Weight (kDa)

5.83

Isoelectric Point (pI)

52.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EIN3_DNA-bd PF04873 49 - 298 1.1e-131 Ethylene insensitive 3, DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 717
AasI GACNNNNNNGTC 1 cut(s) 1466
Acc36I ACCTGC 1 cut(s) 1196
AccB7I CCANNNNNTGG 2 cut(s) 1291, 1513
AccBSI CCGCTC 1 cut(s) 1042
AccI GTMKAC 1 cut(s) 117
AccIII TCCGGA 1 cut(s) 1414
AciI CCGC 5 cut(s) 530, 605, 767, 960, 1042
AclWI GGATC 3 cut(s) 305, 593, 796
AcoI YGGCCR 1 cut(s) 1449
AcsI RAATTY 1 cut(s) 1552
AcuI CTGAAG 2 cut(s) 524, 533
AcyI GRCGYC 1 cut(s) 225
AfaI GTAC 1 cut(s) 1457
AfiI CCNNNNNNNGG 8 cut(s) 294, 371, 386, 683, 892, 1291, 1421, 1513
AgsI TTSAA 9 cut(s) 110, 187, 304, 316, 736, 1001, 1262, 1275, 1558
AhlI ACTAGT 1 cut(s) 1360
AleI CACNNNNGTG 1 cut(s) 646
Alw26I GTCTC 4 cut(s) 165, 197, 604, 1302
AlwI GGATC 3 cut(s) 305, 593, 796
AlwNI CAGNNNCTG 1 cut(s) 1549
Ama87I CYCGRG 2 cut(s) 903, 917
Aor13HI TCCGGA 1 cut(s) 1414
AoxI GGCC 3 cut(s) 650, 674, 1449
ApoI RAATTY 1 cut(s) 1552
ArsI GACNNNNNNTTYG 4 cut(s) 376, 408, 550, 582
AseI ATTAAT 1 cut(s) 975
AspS9I GGNCC 3 cut(s) 446, 521, 704
AsuHPI GGTGA 2 cut(s) 781, 1429
AsuII TTCGAA 1 cut(s) 236
AvaI CYCGRG 2 cut(s) 903, 917
AvaII GGWCC 3 cut(s) 446, 521, 704
BalI TGGCCA 1 cut(s) 1451
BanII GRGCYC 1 cut(s) 289
BauI CACGAG 1 cut(s) 1150
BbvCI CCTCAGC 2 cut(s) 678, 1371
BccI CCATC 8 cut(s) 13, 130, 224, 287, 316, 1285, 1492, 1615
BceAI ACGGC 1 cut(s) 864
BclI TGATCA 2 cut(s) 771, 1434
BcoDI GTCTC 4 cut(s) 165, 197, 604, 1302
BcuI ACTAGT 1 cut(s) 1360
BfaI CTAG 4 cut(s) 264, 282, 1073, 1361
BfmI CTRYAG 1 cut(s) 102
BfuAI ACCTGC 1 cut(s) 1196
Bme18I GGWCC 3 cut(s) 446, 521, 704
BmeT110I CYCGRG 2 cut(s) 903, 917
BmgT120I GGNCC 3 cut(s) 446, 521, 704
BmiI GGNNCC 1 cut(s) 1616
BmsI GCATC 5 cut(s) 576, 1053, 1075, 1340, 1513
BpmI CTGGAG 1 cut(s) 510
Bpu10I CCTNAGC 2 cut(s) 678, 1371
Bpu14I TTCGAA 1 cut(s) 236
BpuEI CTTGAG 3 cut(s) 173, 179, 324
BsaHI GRCGYC 1 cut(s) 225
BsaJI CCNNGG 2 cut(s) 644, 1131
BsaWI WCCGGW 2 cut(s) 1414, 1682
Bsc4I CCNNNNNNNGG 8 cut(s) 294, 371, 386, 683, 892, 1291, 1421, 1513
Bse1I ACTGG 2 cut(s) 391, 1379
Bse3DI GCAATG 1 cut(s) 1695
BseAI TCCGGA 1 cut(s) 1414
BseDI CCNNGG 2 cut(s) 644, 1131
BseGI GGATG 5 cut(s) 145, 151, 168, 1066, 1331
BseLI CCNNNNNNNGG 8 cut(s) 294, 371, 386, 683, 892, 1291, 1421, 1513
BseMI GCAATG 1 cut(s) 1695
BseMII CTCAG 4 cut(s) 357, 692, 1385, 1550
BseNI ACTGG 2 cut(s) 391, 1379
BseRI GAGGAG 3 cut(s) 699, 921, 1133
Bsh1285I CGRYCG 1 cut(s) 1392
BshFI GGCC 3 cut(s) 652, 676, 1451
BsiEI CGRYCG 1 cut(s) 1392
BsiHKCI CYCGRG 2 cut(s) 903, 917
BsiSI CCGG 3 cut(s) 788, 1415, 1683
BslFI GGGAC 2 cut(s) 1292, 1603
BslI CCNNNNNNNGG 8 cut(s) 294, 371, 386, 683, 892, 1291, 1421, 1513
BsmAI GTCTC 4 cut(s) 165, 197, 604, 1302
BsmBI CGTCTC 2 cut(s) 197, 604
BsmFI GGGAC 2 cut(s) 1292, 1603
BsmI GAATGC 1 cut(s) 1655
BsnI GGCC 3 cut(s) 652, 676, 1451
BsoBI CYCGRG 2 cut(s) 903, 917
Bsp119I TTCGAA 1 cut(s) 236
Bsp1286I GDGCHC 1 cut(s) 289
Bsp13I TCCGGA 1 cut(s) 1414
Bsp143I GATC 8 cut(s) 297, 436, 598, 771, 801, 1199, 1389, 1434
BspACI CCGC 5 cut(s) 530, 605, 767, 960, 1042
BspANI GGCC 3 cut(s) 652, 676, 1451
BspCNI CTCAG 4 cut(s) 358, 691, 1384, 1549
BspEI TCCGGA 1 cut(s) 1414
BspHI TCATGA 1 cut(s) 727
BspLI GGNNCC 1 cut(s) 1616
BspMI ACCTGC 1 cut(s) 1196
BspPI GGATC 3 cut(s) 305, 593, 796
BspQI GCTCTTC 1 cut(s) 1032
BspT104I TTCGAA 1 cut(s) 236
BsrBI CCGCTC 1 cut(s) 1042
BsrDI GCAATG 1 cut(s) 1695
BsrI ACTGG 2 cut(s) 391, 1379
BssECI CCNNGG 2 cut(s) 644, 1131
BssMI GATC 8 cut(s) 297, 436, 598, 771, 801, 1199, 1389, 1434
BssNI GRCGYC 1 cut(s) 225
BssSI CACGAG 1 cut(s) 1150
BssT1I CCWWGG 1 cut(s) 644
Bst2BI CACGAG 1 cut(s) 1150
Bst4CI ACNGT 3 cut(s) 615, 1135, 1562
Bst6I CTCTTC 5 cut(s) 55, 152, 660, 885, 1032
BstACI GRCGYC 1 cut(s) 225
BstBI TTCGAA 1 cut(s) 236
BstC8I GCNNGC 4 cut(s) 261, 833, 873, 1078
BstDEI CTNAG 6 cut(s) 366, 462, 678, 1141, 1371, 1536
BstDSI CCRYGG 1 cut(s) 1131
BstF5I GGATG 5 cut(s) 145, 151, 168, 1066, 1331
BstKTI GATC 8 cut(s) 300, 439, 601, 774, 804, 1202, 1392, 1437
BstMAI GTCTC 4 cut(s) 165, 197, 604, 1302
BstMBI GATC 8 cut(s) 297, 436, 598, 771, 801, 1199, 1389, 1434
BstMCI CGRYCG 1 cut(s) 1392
BstSFI CTRYAG 1 cut(s) 102
BstX2I RGATCY 2 cut(s) 297, 801
BstXI CCANNNNNNTGG 1 cut(s) 648
BstYI RGATCY 2 cut(s) 297, 801
BsuRI GGCC 3 cut(s) 652, 676, 1451
BtgI CCRYGG 1 cut(s) 1131
BtsCI GGATG 5 cut(s) 145, 151, 168, 1066, 1331
BtsIMutI CAGTG 2 cut(s) 1235, 1567
BveI ACCTGC 1 cut(s) 1196
Cac8I GCNNGC 4 cut(s) 261, 833, 873, 1078
CaiI CAGNNNCTG 1 cut(s) 1549
CciI TCATGA 1 cut(s) 727
Cfr13I GGNCC 3 cut(s) 446, 521, 704
CseI GACGC 1 cut(s) 214
Csp6I GTAC 1 cut(s) 1456
CviAII CATG 6 cut(s) 37, 728, 924, 1022, 1453, 1513
CviQI GTAC 1 cut(s) 1456
DdeI CTNAG 6 cut(s) 366, 462, 678, 1141, 1371, 1536
DpnI GATC 8 cut(s) 299, 438, 600, 773, 803, 1201, 1391, 1436
DpnII GATC 8 cut(s) 297, 436, 598, 771, 801, 1199, 1389, 1434
DrdI GACNNNNNNGTC 1 cut(s) 1466
DseDI GACNNNNNNGTC 1 cut(s) 1466
EaeI YGGCCR 1 cut(s) 1449
Eam1104I CTCTTC 5 cut(s) 55, 152, 660, 885, 1032
EarI CTCTTC 5 cut(s) 55, 152, 660, 885, 1032
Eco130I CCWWGG 1 cut(s) 644
Eco24I GRGCYC 1 cut(s) 289
Eco47I GGWCC 3 cut(s) 446, 521, 704
Eco57I CTGAAG 2 cut(s) 524, 533
Eco88I CYCGRG 2 cut(s) 903, 917
EcoO109I RGGNCCY 1 cut(s) 704
EcoT14I CCWWGG 1 cut(s) 644
EcoT22I ATGCAT 1 cut(s) 1068
EcoT38I GRGCYC 1 cut(s) 289
ErhI CCWWGG 1 cut(s) 644
Esp3I CGTCTC 2 cut(s) 197, 604
FaeI CATG 6 cut(s) 40, 731, 927, 1025, 1456, 1516
FaqI GGGAC 2 cut(s) 1292, 1603
FatI CATG 6 cut(s) 36, 727, 923, 1021, 1452, 1512
FauI CCCGC 1 cut(s) 953
FauNDI CATATG 2 cut(s) 780, 1344
FbaI TGATCA 2 cut(s) 771, 1434
FblI GTMKAC 1 cut(s) 117
FokI GGATG 5 cut(s) 152, 158, 175, 1053, 1318
FriOI GRGCYC 1 cut(s) 289
FspBI CTAG 4 cut(s) 264, 282, 1073, 1361
GsuI CTGGAG 1 cut(s) 510
HaeIII GGCC 3 cut(s) 652, 676, 1451
HapII CCGG 3 cut(s) 788, 1415, 1683
HgaI GACGC 1 cut(s) 214
Hin1I GRCGYC 1 cut(s) 225
Hin1II CATG 6 cut(s) 40, 731, 927, 1025, 1456, 1516
HincII GTYRAC 2 cut(s) 118, 1606
HindII GTYRAC 2 cut(s) 118, 1606
HindIII AAGCTT 3 cut(s) 741, 809, 1078
HinfI GANTC 5 cut(s) 559, 920, 1249, 1540, 1631
HpaI GTTAAC 1 cut(s) 1606
HpaII CCGG 3 cut(s) 788, 1415, 1683
HphI GGTGA 2 cut(s) 781, 1429
Hpy166II GTNNAC 5 cut(s) 118, 689, 1138, 1149, 1606
Hpy188I TCNGA 4 cut(s) 397, 475, 1539, 1754
Hpy8I GTNNAC 5 cut(s) 118, 689, 1138, 1149, 1606
Hpy99I CGWCG 1 cut(s) 230
HpyAV CCTTC 5 cut(s) 215, 364, 995, 1006, 1688
HpyCH4III ACNGT 3 cut(s) 615, 1135, 1562
HpyCH4IV ACGT 2 cut(s) 190, 996
HpyCH4V TGCA 6 cut(s) 589, 835, 1066, 1099, 1526, 1582
HpyF3I CTNAG 6 cut(s) 366, 462, 678, 1141, 1371, 1536
HpySE526I ACGT 2 cut(s) 190, 996
Hsp92I GRCGYC 1 cut(s) 225
Hsp92II CATG 6 cut(s) 40, 731, 927, 1025, 1456, 1516
Kpn2I TCCGGA 1 cut(s) 1414
Ksp22I TGATCA 2 cut(s) 771, 1434
KspAI GTTAAC 1 cut(s) 1606
Kzo9I GATC 8 cut(s) 297, 436, 598, 771, 801, 1199, 1389, 1434
LguI GCTCTTC 1 cut(s) 1032
LmnI GCTCC 5 cut(s) 199, 544, 907, 1328, 1685
LweI GCATC 5 cut(s) 576, 1053, 1075, 1340, 1513
MaeI CTAG 4 cut(s) 264, 282, 1073, 1361
MaeII ACGT 2 cut(s) 190, 996
MaeIII GTNAC 3 cut(s) 382, 506, 1208
MalI GATC 8 cut(s) 299, 438, 600, 773, 803, 1201, 1391, 1436
MbiI CCGCTC 1 cut(s) 1042
MboI GATC 8 cut(s) 297, 436, 598, 771, 801, 1199, 1389, 1434
MflI RGATCY 2 cut(s) 297, 801
MhlI GDGCHC 1 cut(s) 289
MlsI TGGCCA 1 cut(s) 1451
MluCI AATT 2 cut(s) 400, 1552
MluNI TGGCCA 1 cut(s) 1451
MlyI GAGTC 2 cut(s) 553, 929
MmeI TCCRAC 3 cut(s) 548, 1387, 1408
Mox20I TGGCCA 1 cut(s) 1451
Mph1103I ATGCAT 1 cut(s) 1068
MroI TCCGGA 1 cut(s) 1414
MscI TGGCCA 1 cut(s) 1451
MseI TTAA 5 cut(s) 12, 761, 882, 975, 1605
MslI CAYNNNNRTG 2 cut(s) 646, 1347
Msp20I TGGCCA 1 cut(s) 1451
MspA1I CMGCKG 2 cut(s) 452, 1549
MspI CCGG 3 cut(s) 788, 1415, 1683
Mva1269I GAATGC 1 cut(s) 1655
NdeI CATATG 2 cut(s) 780, 1344
NdeII GATC 8 cut(s) 297, 436, 598, 771, 801, 1199, 1389, 1434
NlaIII CATG 6 cut(s) 40, 731, 927, 1025, 1456, 1516
NlaIV GGNNCC 1 cut(s) 1616
NmuCI GTSAC 1 cut(s) 382
NsiI ATGCAT 1 cut(s) 1068
NspV TTCGAA 1 cut(s) 236
OliI CACNNNNGTG 1 cut(s) 646
PagI TCATGA 1 cut(s) 727
PciSI GCTCTTC 1 cut(s) 1032
PcsI WCGNNNNNNNCGW 1 cut(s) 123
PctI GAATGC 1 cut(s) 1655
PfeI GAWTC 3 cut(s) 1249, 1540, 1631
PflMI CCANNNNNTGG 2 cut(s) 1291, 1513
Ple19I CGATCG 1 cut(s) 1392
PleI GAGTC 2 cut(s) 553, 928
PpsI GAGTC 2 cut(s) 553, 928
PpuMI RGGWCCY 1 cut(s) 704
PshBI ATTAAT 1 cut(s) 975
PsiI TTATAA 1 cut(s) 717
Psp5II RGGWCCY 1 cut(s) 704
PspN4I GGNNCC 1 cut(s) 1616
PspPI GGNCC 3 cut(s) 446, 521, 704
PspPPI RGGWCCY 1 cut(s) 704
PstNI CAGNNNCTG 1 cut(s) 1549
PsuI RGATCY 2 cut(s) 297, 801
PvuI CGATCG 1 cut(s) 1392
PvuII CAGCTG 2 cut(s) 452, 1549
RsaI GTAC 1 cut(s) 1457
RsaNI GTAC 1 cut(s) 1456
RseI CAYNNNNRTG 2 cut(s) 646, 1347
SalI GTCGAC 1 cut(s) 116
SapI GCTCTTC 1 cut(s) 1032
SaqAI TTAA 5 cut(s) 12, 761, 882, 975, 1605
Sau3AI GATC 8 cut(s) 297, 436, 598, 771, 801, 1199, 1389, 1434
Sau96I GGNCC 3 cut(s) 446, 521, 704
SchI GAGTC 2 cut(s) 553, 929
SduI GDGCHC 1 cut(s) 289
SfaNI GCATC 5 cut(s) 576, 1053, 1075, 1340, 1513
SfcI CTRYAG 1 cut(s) 102
SfuI TTCGAA 1 cut(s) 236
SinI GGWCC 3 cut(s) 446, 521, 704
SmiMI CAYNNNNRTG 2 cut(s) 646, 1347
SmlI CTYRAG 3 cut(s) 152, 194, 339
SmoI CTYRAG 3 cut(s) 152, 194, 339
SpeI ACTAGT 1 cut(s) 1360
Sse9I AATT 2 cut(s) 400, 1552
SsiI CCGC 5 cut(s) 530, 605, 767, 960, 1042
SspI AATATT 1 cut(s) 484
SspMI CTAG 4 cut(s) 264, 282, 1073, 1361
StyI CCWWGG 1 cut(s) 644
TaaI ACNGT 3 cut(s) 615, 1135, 1562
TaiI ACGT 2 cut(s) 193, 999
TasI AATT 2 cut(s) 400, 1552
TfiI GAWTC 3 cut(s) 1249, 1540, 1631
Tru1I TTAA 5 cut(s) 12, 761, 882, 975, 1605
Tru9I TTAA 5 cut(s) 12, 761, 882, 975, 1605
TscAI CASTG 2 cut(s) 1235, 1567
TseFI GTSAC 1 cut(s) 382
Tsp45I GTSAC 1 cut(s) 382
TspDTI ATGAA 6 cut(s) 678, 936, 1193, 1262, 1331, 1370
TspGWI ACGGA 1 cut(s) 794
TspRI CASTG 2 cut(s) 1235, 1567
Van91I CCANNNNNTGG 2 cut(s) 1291, 1513
VpaK11BI GGWCC 3 cut(s) 446, 521, 704
VspI ATTAAT 1 cut(s) 975
XapI RAATTY 1 cut(s) 1552
XbaI TCTAGA 1 cut(s) 281
XcmI CCANNNNNNNNNTGG 1 cut(s) 1342
XmiI GTMKAC 1 cut(s) 117
XspI CTAG 4 cut(s) 264, 282, 1073, 1361
Zsp2I ATGCAT 1 cut(s) 1068
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.