Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0001963

Physical Location & Seq

Genomic Coordinates Forward (+)

48844856 .. 48846712

Gene Structure 1857 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG352200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

ATGATCATGATGTTCGACGAAATGGGATTTTGTGGTGATCTAGATTTTATATCTACAACTCCTGGGGGAGAAGTGGCCATCCCACAGGCTGAAACCGAGGCCACCGTGGAGGATGATTATACTGATGATGAGATAGATGTAGATGAGCTTGAGAGAAGGATGTGGAGAGATAAAATGCGTCTCAAGAGACTCAGAGAACAGACGACTAAGGGTGGTAAGGAAGTGATTGTCACTGCAAAGCAGAGGCAGTCTCAAGAGCAGGCAAGGAGGAAGAAGATGTCGAGGGCCCAAGATGGGATTTTGAAGTACATGTTGAAGATGATGGAAGTTTGCAAAGCCCAAGGCTTTGTCTATGGTATTATTCCAGAGAAGGGAAAACCAGTTACTGGGGCATCAGACAATCTTCGTGAATGGTGGAAGGACAAGGTCAGGTTTGATCGTAATGGACCAGCAGCTATATCCAAGTATCAAGCTGATAATGCAGTTCCCGGCAGGAACGATGGGTGCAACCCAATTGGTCCAACCCCTCACACCTTGCAAGAGCTTCAAGACACCACTCTGGGTTCTCTCTTGTCAGCACTTATGCAGCATTGTGATCCTCCACAGAGGCGGTTTCCTTTAGAGAAAGGTGTTCCACCACCCTGGTGGCCCACTGCGAATGAGGAATGGTGGCCTGAACTGGGTTTGCCCAAGGATCAGGGTCCTCCACCATACAAGAAGCCACATGACTTGAAAAAGGCATGGAAGGTGGGTGTTCTCACTGCAGTTATTAAGCATATGTCCCCTGATATTGCCAAGATTCGTAAGCTTGTGAGGCAATCTAAATGCTTGCAAGACAAGATGACAGCTAAGGAGAGTTCTACCTGGCTGGCCATCATCAACCAAGAAGAGTCCCTGGCTCGAGAGCTTTATCCAAATTCATGCCCCCCTTTGTCTACAGCTGGAGCCAGTGGATCTTTGGTGATTAATGACTGCAGTGAGTATGATGTTGAAGGGGCTGAAGATGAGCCAAACTTTGATGTTCAGGAGTGTAAGCCTGATAATCTTCATTCATCGAATTTTGGGATGGAAATAATGAGGGAAGGGCTTCAAGTCCATCAACCCACTTCTTTTCCAGTTAAAGGAGAAGTCATCACAAACTTGGATTTCATGAGGAAAAGGAAGCCTTCAAGCGATCTAAACATGGTGGTGGATCAGAAGATCTACACCTGTGAGTTCGTTCAGTGTCCTTACAGCGAATTCCGTCATGGTTTTCATGACAGAACTTCCAGGGACAATCATCAATTGAGTTGCCCATTCAGTAACAGGTCTTCTGAGTTCGGGGCATCTAATTTCCTTGTTAATGAGATTAAACCAGTCATCTTCCCTCAATCCTTTGTCCAAACCAAGGCAGCAGCTCCTTCCGCCAAGCCGGTGCCACCATCCTTTGATCTATCAGGAGGAGTTCCAGAGGATGGGCAGAAAATGATCAGCGAGCTTATGTCTTTCTATGATAGTAATGTTCAAGGTGACAAGAATGCAAATCCGAACAGTTCAGCGACCAATGGTCAGAACTTTTCTCAGCCTAAAGTTGCACATCAACAGGATGAATACTTCCGTGGTCAAGGAGTTAGGTTGGATGGGAATTTCTTTGAAGAATCCAACATCTCCAGTAATCATCACTTGTTTCCTCGAGAGGAAGGTCAATTCGAGCAGTTTAAGGTCGTGAGTTCTCCATTTGAGACCAACCATAACAGTAACTTTCCTATGATGTTTGGGTCCCCATTTGACTTGGCCTCTTTTGATTACAAAGAAGATCTACAAGGGCTGGCATTGCCAATGGAGAAGCAGTCGGAGACTTCAATCTGGTTCCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0000976 GO:0001067 GO:0001666 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009755 GO:0009756 GO:0009873 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010182 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0035556 GO:0036293 GO:0042221 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071369 GO:0071495 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

EIN3

Protein Analysis

618

Amino Acids

69.89

Weight (kDa)

5.39

Isoelectric Point (pI)

51.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EIN3_DNA-bd	PF04873	48 - 297	3.4e-131	Ethylene insensitive 3, DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001963)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27050 AT3G20770
fragaria_vesca	FvH4_1g28720 FvH4_1g28720 FvH4_7g04940 FvH4_7g04940 FvH4_7g04940 FvH4_7g04940 FvH4_7g04940
malus_domestica	MD02G1266200.v1.1 MD02G1266300.v1.1 MD07G1053500.v1.1 MD07G1053800.v1.1 MD08G1245800.v1.1 MD15G1441000.v1.1
prunus_persica	Prupe.2G058400_v2.0.a1 Prupe.2G058500_v2.0.a1 Prupe.2G070300_v2.0.a1
pyrus_communis	pycom02g22750 pycom02g22760 pycom07g04140 pycom07g04160 pycom08g21330 pycom15g38880
rosa_chinensis	RchiOBHm_Chr1g0331011 RchiOBHm_Chr5g0049961
rosa_laevigata	RLG00000029759 RLG00000034672
rosa_multiflora	Rmu_sc0000333.1_g000038 Rmu_sc0013622.1_g000002 Rmu_sc0013622.1_g000003
rosa_roxburghii	Rroxscaffold_1G00031290 Rroxscaffold_4G00319550
rosa_rugosa	Rorug01G0091600 Rorug05G0255200
rosa_samantha	Rh1AG113300 Rh1BG087200 Rh1CG110200 Rh1DG118900 Rh5AG329100 Rh5BG339600 Rh5CG365600 Rh5DG352200
rosa_wichuraiana	Rw1G009240 Rw5G031070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1414
AccB7I	CCANNNNNTGG	2 cut(s)	386, 1454
AccI	GTMKAC	1 cut(s)	935
AciI	CCGC	2 cut(s)	610, 1404
AclWI	GGATC	4 cut(s)	590, 702, 961, 1200
AcoI	YGGCCR	2 cut(s)	75, 870
AcsI	RAATTY	4 cut(s)	916, 1057, 1238, 1624
AcuI	CTGAAG	1 cut(s)	1020
AfaI	GTAC	1 cut(s)	308
AfiI	CCNNNNNNNGG	7 cut(s)	294, 371, 386, 680, 1121, 1387, 1454
AflIII	ACRYGT	1 cut(s)	309
AhdI	GACNNNNNGTC	1 cut(s)	1545
AjnI	CCWGG	5 cut(s)	61, 641, 863, 894, 1268
AleI	CACNNNNGTG	1 cut(s)	643
Alw26I	GTCTC	5 cut(s)	181, 185, 255, 1715, 1829
AlwI	GGATC	4 cut(s)	590, 702, 961, 1200
AlwNI	CAGNNNCTG	1 cut(s)	386
Ama87I	CYCGRG	2 cut(s)	900, 1671
AoxI	GGCC	7 cut(s)	75, 99, 285, 647, 671, 870, 1773
ApaI	GGGCCC	1 cut(s)	289
ApeKI	GCWGC	4 cut(s)	452, 586, 1391, 1394
ApoI	RAATTY	4 cut(s)	916, 1057, 1238, 1624
AseI	ATTAAT	1 cut(s)	966
Asp700I	GAANNNNTTC	1 cut(s)	1086
AspS9I	GGNCC	7 cut(s)	285, 286, 446, 518, 648, 701, 1758
AsuC2I	CCSGG	1 cut(s)	489
AsuHPI	GGTGA	3 cut(s)	47, 973, 1520
AvaI	CYCGRG	2 cut(s)	900, 1671
AvaII	GGWCC	4 cut(s)	446, 518, 701, 1758
BaeGI	GKGCMC	1 cut(s)	289
BalI	TGGCCA	2 cut(s)	77, 872
BanI	GGYRCC	1 cut(s)	1414
BanII	GRGCYC	1 cut(s)	289
BarI	GAAGNNNNNNTAC	2 cut(s)	1294, 1326
BbsI	GAAGAC	1 cut(s)	1302
BbvI	GCAGC	4 cut(s)	464, 598, 1403, 1406
BciT130I	CCWGG	5 cut(s)	63, 643, 865, 896, 1270
BclI	TGATCA	2 cut(s)	3, 1467
BcnI	CCSGG	1 cut(s)	489
BcoDI	GTCTC	5 cut(s)	181, 185, 255, 1715, 1829
BfaI	CTAG	1 cut(s)	41
BfmI	CTRYAG	3 cut(s)	762, 936, 973
BglII	AGATCT	2 cut(s)	1200, 1795
BisI	GCNGC	4 cut(s)	453, 587, 1392, 1395
BlsI	GCNGC	4 cut(s)	454, 588, 1393, 1396
Bme1390I	CCNGG	6 cut(s)	63, 489, 643, 865, 896, 1270
Bme18I	GGWCC	4 cut(s)	446, 518, 701, 1758
BmeRI	GACNNNNNGTC	1 cut(s)	1545
BmeT110I	CYCGRG	2 cut(s)	900, 1671
BmgT120I	GGNCC	7 cut(s)	285, 286, 446, 518, 648, 701, 1758
BmiI	GGNNCC	7 cut(s)	287, 702, 946, 1416, 1759, 1760, 1850
BmrFI	CCNGG	6 cut(s)	63, 489, 643, 865, 896, 1270
BmrI	ACTGGG	2 cut(s)	396, 689
BmsI	GCATC	2 cut(s)	401, 1334
BmuI	ACTGGG	2 cut(s)	396, 689
BpiI	GAAGAC	1 cut(s)	1302
BplI	GAGNNNNNCTC	2 cut(s)	235, 267
BpmI	CTGGAG	2 cut(s)	963, 1633
Bpu10I	CCTNAGC	1 cut(s)	849
BpuEI	CTTGAG	3 cut(s)	167, 170, 237
BpuMI	CCSGG	1 cut(s)	489
BsaI	GGTCTC	1 cut(s)	1715
BsaXI	ACNNNNNCTCC	2 cut(s)	1814, 1844
Bsc4I	CCNNNNNNNGG	7 cut(s)	294, 371, 386, 680, 1121, 1387, 1454
Bse118I	RCCGGY	1 cut(s)	1411
Bse1I	ACTGG	8 cut(s)	380, 391, 684, 948, 1115, 1355, 1650, 1852
Bse3DI	GCAATG	1 cut(s)	1811
BseBI	CCWGG	5 cut(s)	63, 643, 865, 896, 1270
BseGI	GGATG	8 cut(s)	78, 118, 165, 1071, 1421, 1459, 1591, 1624
BseLI	CCNNNNNNNGG	7 cut(s)	294, 371, 386, 680, 1121, 1387, 1454
BseMI	GCAATG	1 cut(s)	1811
BseMII	CTCAG	3 cut(s)	205, 1305, 1574
BseNI	ACTGG	8 cut(s)	380, 391, 684, 948, 1115, 1355, 1650, 1852
BseRI	GAGGAG	1 cut(s)	1455
BseSI	GKGCMC	1 cut(s)	289
BseXI	GCAGC	4 cut(s)	464, 598, 1403, 1406
BshFI	GGCC	7 cut(s)	77, 101, 287, 649, 673, 872, 1775
BshNI	GGYRCC	1 cut(s)	1414
BsiHKCI	CYCGRG	2 cut(s)	900, 1671
BsiSI	CCGG	2 cut(s)	489, 1412
BslFI	GGGAC	4 cut(s)	766, 877, 1286, 1744
BslI	CCNNNNNNNGG	7 cut(s)	294, 371, 386, 680, 1121, 1387, 1454
BsmAI	GTCTC	5 cut(s)	181, 185, 255, 1715, 1829
BsmBI	CGTCTC	1 cut(s)	185
BsmFI	GGGAC	4 cut(s)	766, 877, 1286, 1744
BsmI	GAATGC	1 cut(s)	1522
BsnI	GGCC	7 cut(s)	77, 101, 287, 649, 673, 872, 1775
Bso31I	GGTCTC	1 cut(s)	1715
BsoBI	CYCGRG	2 cut(s)	900, 1671
Bsp120I	GGGCCC	1 cut(s)	285
Bsp1286I	GDGCHC	1 cut(s)	289
BspACI	CCGC	2 cut(s)	610, 1404
BspANI	GGCC	7 cut(s)	77, 101, 287, 649, 673, 872, 1775
BspCNI	CTCAG	3 cut(s)	204, 1306, 1573
BspHI	TCATGA	3 cut(s)	6, 1149, 1255
BspLI	GGNNCC	7 cut(s)	287, 702, 946, 1416, 1759, 1760, 1850
BspMAI	CTGCAG	2 cut(s)	766, 977
BspPI	GGATC	4 cut(s)	590, 702, 961, 1200
BspT107I	GGYRCC	1 cut(s)	1414
BspTNI	GGTCTC	1 cut(s)	1715
BsrDI	GCAATG	1 cut(s)	1811
BsrFI	RCCGGY	1 cut(s)	1411
BsrI	ACTGG	8 cut(s)	380, 391, 684, 948, 1115, 1355, 1650, 1852
BssAI	RCCGGY	1 cut(s)	1411
BssT1I	CCWWGG	3 cut(s)	340, 690, 1386
Bst2UI	CCWGG	5 cut(s)	63, 643, 865, 896, 1270
Bst4CI	ACNGT	3 cut(s)	106, 1532, 1736
Bst6I	CTCTTC	1 cut(s)	882
BstC8I	GCNNGC	5 cut(s)	261, 830, 870, 1475, 1809
BstDEI	CTNAG	5 cut(s)	191, 207, 849, 1314, 1560
BstDSI	CCRYGG	2 cut(s)	105, 1597
BstF5I	GGATG	8 cut(s)	78, 118, 165, 1071, 1421, 1459, 1591, 1624
BstMAI	GTCTC	5 cut(s)	181, 185, 255, 1715, 1829
BstMWI	GCNNNNNNNGC	4 cut(s)	479, 814, 1403, 1813
BstNI	CCWGG	5 cut(s)	63, 643, 865, 896, 1270
BstNSI	RCATGY	1 cut(s)	313
BstSCI	CCNGG	6 cut(s)	61, 487, 641, 863, 894, 1268
BstSFI	CTRYAG	3 cut(s)	762, 936, 973
BstSLI	GKGCMC	1 cut(s)	289
BstV1I	GCAGC	4 cut(s)	464, 598, 1403, 1406
BstV2I	GAAGAC	1 cut(s)	1302
BstX2I	RGATCY	3 cut(s)	953, 1200, 1795
BstXI	CCANNNNNNTGG	2 cut(s)	642, 645
BstYI	RGATCY	3 cut(s)	953, 1200, 1795
BsuRI	GGCC	7 cut(s)	77, 101, 287, 649, 673, 872, 1775
BtgI	CCRYGG	2 cut(s)	105, 1597
BtsCI	GGATG	8 cut(s)	78, 118, 165, 1071, 1421, 1459, 1591, 1624
BtsI	GCAGTG	4 cut(s)	231, 651, 759, 982
BtsIMutI	CAGTG	6 cut(s)	231, 651, 759, 955, 982, 1229
Cac8I	GCNNGC	5 cut(s)	261, 830, 870, 1475, 1809
CaiI	CAGNNNCTG	1 cut(s)	386
CciI	TCATGA	3 cut(s)	6, 1149, 1255
Cfr10I	RCCGGY	1 cut(s)	1411
Cfr13I	GGNCC	7 cut(s)	285, 286, 446, 518, 648, 701, 1758
CseI	GACGC	1 cut(s)	167
Csp6I	GTAC	1 cut(s)	307
CspCI	CAANNNNNGTGG	2 cut(s)	711, 746
CviAII	CATG	9 cut(s)	7, 310, 725, 741, 921, 1150, 1183, 1247, 1256
CviQI	GTAC	1 cut(s)	307
DdeI	CTNAG	5 cut(s)	191, 207, 849, 1314, 1560
DriI	GACNNNNNGTC	1 cut(s)	1545
EaeI	YGGCCR	2 cut(s)	75, 870
Eam1104I	CTCTTC	1 cut(s)	882
Eam1105I	GACNNNNNGTC	1 cut(s)	1545
EarI	CTCTTC	1 cut(s)	882
EciI	GGCGGA	1 cut(s)	1393
Eco130I	CCWWGG	3 cut(s)	340, 690, 1386
Eco24I	GRGCYC	1 cut(s)	289
Eco31I	GGTCTC	1 cut(s)	1715
Eco47I	GGWCC	4 cut(s)	446, 518, 701, 1758
Eco57I	CTGAAG	1 cut(s)	1020
Eco88I	CYCGRG	2 cut(s)	900, 1671
EcoO109I	RGGNCCY	3 cut(s)	285, 701, 1758
EcoRI	GAATTC	1 cut(s)	1238
EcoRII	CCWGG	5 cut(s)	61, 641, 863, 894, 1268
EcoT14I	CCWWGG	3 cut(s)	340, 690, 1386
EcoT38I	GRGCYC	1 cut(s)	289
ErhI	CCWWGG	3 cut(s)	340, 690, 1386
Esp3I	CGTCTC	1 cut(s)	185
FaeI	CATG	9 cut(s)	10, 313, 728, 744, 924, 1153, 1186, 1250, 1259
FalI	AAGNNNNNCTT	2 cut(s)	1150, 1182
FaqI	GGGAC	4 cut(s)	766, 877, 1286, 1744
FatI	CATG	9 cut(s)	6, 309, 724, 740, 920, 1149, 1182, 1246, 1255
FauNDI	CATATG	1 cut(s)	777
FbaI	TGATCA	2 cut(s)	3, 1467
FblI	GTMKAC	1 cut(s)	935
Fnu4HI	GCNGC	4 cut(s)	453, 587, 1392, 1395
FokI	GGATG	8 cut(s)	65, 125, 172, 1078, 1408, 1466, 1598, 1631
FriOI	GRGCYC	1 cut(s)	289
Fsp4HI	GCNGC	4 cut(s)	453, 587, 1392, 1395
FspBI	CTAG	1 cut(s)	41
GluI	GCNGC	4 cut(s)	453, 587, 1392, 1395
GsuI	CTGGAG	2 cut(s)	963, 1633
HaeIII	GGCC	7 cut(s)	77, 101, 287, 649, 673, 872, 1775
HapII	CCGG	2 cut(s)	489, 1412
HgaI	GACGC	1 cut(s)	167
Hin1II	CATG	9 cut(s)	10, 313, 728, 744, 924, 1153, 1186, 1250, 1259
HindIII	AAGCTT	1 cut(s)	806
HinfI	GANTC	4 cut(s)	189, 799, 890, 1637
HpaII	CCGG	2 cut(s)	489, 1412
HphI	GGTGA	3 cut(s)	47, 973, 1520
Hpy166II	GTNNAC	1 cut(s)	936
Hpy188I	TCNGA	7 cut(s)	194, 397, 1197, 1315, 1527, 1551, 1834
Hpy8I	GTNNAC	1 cut(s)	936
Hpy99I	CGWCG	1 cut(s)	20
HpyAV	CCTTC	9 cut(s)	150, 364, 412, 739, 986, 1076, 1176, 1410, 1673
HpyCH4III	ACNGT	3 cut(s)	106, 1532, 1736
HpyF10VI	GCNNNNNNNGC	4 cut(s)	479, 814, 1403, 1813
HpyF3I	CTNAG	5 cut(s)	191, 207, 849, 1314, 1560
Hsp92II	CATG	9 cut(s)	10, 313, 728, 744, 924, 1153, 1186, 1250, 1259
KflI	GGGWCCC	1 cut(s)	1758
Ksp22I	TGATCA	2 cut(s)	3, 1467
LmnI	GCTCC	2 cut(s)	944, 1402
Lsp1109I	GCAGC	4 cut(s)	464, 598, 1403, 1406
LweI	GCATC	2 cut(s)	401, 1334
MaeI	CTAG	1 cut(s)	41
MaeIII	GTNAC	5 cut(s)	229, 382, 1301, 1508, 1736
MfeI	CAATTG	2 cut(s)	513, 1283
MflI	RGATCY	3 cut(s)	953, 1200, 1795
MhlI	GDGCHC	1 cut(s)	289
MlsI	TGGCCA	2 cut(s)	77, 872
MluCI	AATT	8 cut(s)	513, 916, 1057, 1238, 1283, 1330, 1624, 1685
MluNI	TGGCCA	2 cut(s)	77, 872
MlyI	GAGTC	2 cut(s)	183, 899
MmeI	TCCRAC	4 cut(s)	545, 1596, 1665, 1812
Mox20I	TGGCCA	2 cut(s)	77, 872
MroXI	GAANNNNTTC	1 cut(s)	1086
MscI	TGGCCA	2 cut(s)	77, 872
MseI	TTAA	6 cut(s)	771, 966, 1119, 1341, 1350, 1698
MslI	CAYNNNNRTG	2 cut(s)	643, 1187
Msp20I	TGGCCA	2 cut(s)	77, 872
MspA1I	CMGCKG	1 cut(s)	941
MspI	CCGG	2 cut(s)	489, 1412
MspR9I	CCNGG	6 cut(s)	63, 489, 643, 865, 896, 1270
MunI	CAATTG	2 cut(s)	513, 1283
Mva1269I	GAATGC	1 cut(s)	1522
MvaI	CCWGG	5 cut(s)	63, 643, 865, 896, 1270
MwoI	GCNNNNNNNGC	4 cut(s)	479, 814, 1403, 1813
NciI	CCSGG	1 cut(s)	489
NdeI	CATATG	1 cut(s)	777
NlaIII	CATG	9 cut(s)	10, 313, 728, 744, 924, 1153, 1186, 1250, 1259
NlaIV	GGNNCC	7 cut(s)	287, 702, 946, 1416, 1759, 1760, 1850
NmuCI	GTSAC	2 cut(s)	229, 1508
NspI	RCATGY	1 cut(s)	313
OliI	CACNNNNGTG	1 cut(s)	643
PaeR7I	CTCGAG	2 cut(s)	900, 1671
PagI	TCATGA	3 cut(s)	6, 1149, 1255
PciI	ACATGT	1 cut(s)	309
PctI	GAATGC	1 cut(s)	1522
PdmI	GAANNNNTTC	1 cut(s)	1086
PfeI	GAWTC	2 cut(s)	799, 1637
PflFI	GACNNNGTC	1 cut(s)	425
PflMI	CCANNNNNTGG	2 cut(s)	386, 1454
PkrI	GCNGC	4 cut(s)	454, 588, 1393, 1396
PleI	GAGTC	2 cut(s)	183, 898
PpsI	GAGTC	2 cut(s)	183, 898
PpuMI	RGGWCCY	2 cut(s)	701, 1758
PscI	ACATGT	1 cut(s)	309
PshBI	ATTAAT	1 cut(s)	966
Psp5II	RGGWCCY	2 cut(s)	701, 1758
Psp6I	CCWGG	5 cut(s)	61, 641, 863, 894, 1268
PspGI	CCWGG	5 cut(s)	61, 641, 863, 894, 1268
PspN4I	GGNNCC	7 cut(s)	287, 702, 946, 1416, 1759, 1760, 1850
PspOMI	GGGCCC	1 cut(s)	285
PspPI	GGNCC	7 cut(s)	285, 286, 446, 518, 648, 701, 1758
PspPPI	RGGWCCY	2 cut(s)	701, 1758
PstI	CTGCAG	2 cut(s)	766, 977
PstNI	CAGNNNCTG	1 cut(s)	386
PsuI	RGATCY	3 cut(s)	953, 1200, 1795
PsyI	GACNNNGTC	1 cut(s)	425
PvuII	CAGCTG	1 cut(s)	941
RsaI	GTAC	1 cut(s)	308
RsaNI	GTAC	1 cut(s)	307
RseI	CAYNNNNRTG	2 cut(s)	643, 1187
SaqAI	TTAA	6 cut(s)	771, 966, 1119, 1341, 1350, 1698
SatI	GCNGC	4 cut(s)	453, 587, 1392, 1395
Sau96I	GGNCC	7 cut(s)	285, 286, 446, 518, 648, 701, 1758
SchI	GAGTC	2 cut(s)	183, 899
ScrFI	CCNGG	6 cut(s)	63, 489, 643, 865, 896, 1270
SduI	GDGCHC	1 cut(s)	289
SfaNI	GCATC	2 cut(s)	401, 1334
SfcI	CTRYAG	3 cut(s)	762, 936, 973
Sfr274I	CTCGAG	2 cut(s)	900, 1671
SinI	GGWCC	4 cut(s)	446, 518, 701, 1758
SlaI	CTCGAG	2 cut(s)	900, 1671
SmiMI	CAYNNNNRTG	2 cut(s)	643, 1187
SmlI	CTYRAG	5 cut(s)	149, 182, 252, 900, 1671
SmoI	CTYRAG	5 cut(s)	149, 182, 252, 900, 1671
Sse9I	AATT	8 cut(s)	513, 916, 1057, 1238, 1283, 1330, 1624, 1685
SsiI	CCGC	2 cut(s)	610, 1404
SspMI	CTAG	1 cut(s)	41
StyD4I	CCNGG	6 cut(s)	61, 487, 641, 863, 894, 1268
StyI	CCWWGG	3 cut(s)	340, 690, 1386
TaaI	ACNGT	3 cut(s)	106, 1532, 1736
TaqI	TCGA	6 cut(s)	15, 281, 901, 1055, 1672, 1689
TasI	AATT	8 cut(s)	513, 916, 1057, 1238, 1283, 1330, 1624, 1685
TatI	WGTACW	1 cut(s)	306
TfiI	GAWTC	2 cut(s)	799, 1637
Tru1I	TTAA	6 cut(s)	771, 966, 1119, 1341, 1350, 1698
Tru9I	TTAA	6 cut(s)	771, 966, 1119, 1341, 1350, 1698
TscAI	CASTG	6 cut(s)	238, 658, 766, 955, 982, 1229
TseFI	GTSAC	2 cut(s)	229, 1508
TseI	GCWGC	4 cut(s)	452, 586, 1391, 1394
Tsp45I	GTSAC	2 cut(s)	229, 1508
TspDTI	ATGAA	6 cut(s)	909, 1037, 1041, 1138, 1244, 1602
TspGWI	ACGGA	2 cut(s)	1232, 1586
TspRI	CASTG	6 cut(s)	238, 658, 766, 955, 982, 1229
Tth111I	GACNNNGTC	1 cut(s)	425
Van91I	CCANNNNNTGG	2 cut(s)	386, 1454
VpaK11BI	GGWCC	4 cut(s)	446, 518, 701, 1758
VspI	ATTAAT	1 cut(s)	966
XapI	RAATTY	4 cut(s)	916, 1057, 1238, 1624
XbaI	TCTAGA	1 cut(s)	40
XceI	RCATGY	1 cut(s)	313
XcmI	CCANNNNNNNNNTGG	2 cut(s)	642, 955
XhoI	CTCGAG	2 cut(s)	900, 1671
XmiI	GTMKAC	1 cut(s)	935
XmnI	GAANNNNTTC	1 cut(s)	1086
XspI	CTAG	1 cut(s)	41

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.