Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0001963

Physical Location & Seq

Genomic Coordinates Forward (+)

4968081 .. 4973220

Gene Structure 5140 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1053800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGGGGATCTTTGAGGAAATGGGTTTCTGTGGTAATCTTGACTTTCTTACGGCGCCATCTGGGGAAGGTGATGCAGCTCCAGAGCATGAACCAGAGGCAGCAGTGGAGGAGGATTATAGTGATGAAGAAATGGATGTTGATGAGCTTGAGAGGAGGATGTGGAGAGATCGAATGCTATTGAAGAGGTTGAGAGAACAAACTAAGGGAAAGGAAAGGGTTGACAATGCAAGACAGCGTCAGTCACAGGAACAAGCTCGAAGGAAGAAGATGTCACGGGCACAAGATGGAATCCTGAAATATATGCTGAAAATGATGGAAGTTTGCAAAGCTCAGGGTTTTGTTTATGGAATTATCCCTGAAAAGGGAAAACCAGTGAGTGGCGCCTCTGACAATCTGCGAGCATGGTGGAAGGAAAAAGTAAGATTTGATCGTAATGGTCCGGCTGCAATTTCTAAGTATCAGGCAGATCATTCAATCCCTGGGAAGAATGAAGACTGCAGTGCAGTGGTATCTACTCCTCACACTCTACAGGAGTTGCAAGACACCACTCTTGGTTCACTTTTGTCGGCTTTGATGCAGCACTGCGATCCACCCCAAAGACGTTTCCCCTTGGAGAAAGGTGTTGCCCCACCTTGGTGGCCTACTGGTAATGAGGAATGGTGGCCTCATTTAAATGTTCCCAAGGATCAGGGTCCTCCCCCATACAAGAAGCCTCATGATCTGAAGAAGGCTTGGAAGGTGAGTGTTCTTACGGCTGTGATAAAGCACATGTCACCCGATATCGCCAAGATCCGCAAGCTTGTTCGTCAGTCCAAGTGTTTGCAAGACAAAATGACTGCTAAGGAGAGCGCCACTTGGCTAGCCATTATACACCAGGAGGAAGCTTTGGCGCGAAGGTTATATCCTGATAGATGTCCACCTCCACCGGCTGGTGGTGGCGGGTCTCTTGCAATCAGTGGTACCAGTGATTATGACGTTGAGGGTGTTGATGATGACGAAAATGTTGAAATAGAGGATTGCAAACCTCTTCTTAATCACTTCAACATTGGAACTGCTGGTCAAAGAGAGAGGCTGGTGCCTCAGATTAAGGGAGAGCTGATTGAGATCAACTCGGATTTTGGTCAAAAGAGGAAGCAGCTGTCTGAAGAACCACAAATGATGTTAAATCAGAAGATTTTCACCTGCGAATATATGCAGTGCCCGTATCATGATTATCGCCTAGGCTTTCTCGATATAACTGCAAGAAACAATCACCAGTTGAATTGTTCATTCGGGAGTAATTCTACACAAGTGTTTGGAATGTCAAGCGGAATGTCAAGCTTTCAGCTTCACAATGAGAAACCTGTGGGATTCTCTCAACCCATTGCTCAACCACCTGCACCAGCAAGTCAACCACCAGTGAACCAGGCAAGTAGGTTTAATGCTTCGGGACTTGGACTTGTCGATAATGGTCAGAAATCTGAGCTTATGTCATTTTATGATAGTAATATTCATCAGAATAAGAACTGCAATCCTGCAAACCTCCATATCGTAGATAACCGCAACCAGCAGCAGTCAAAATATCAGTTTCCAATGAATGATAACTTTTTTGGTCAAGGGATGGATGTAGGACGCAACATCAACATGTCTGAACTGGCCCCTATGCCTATGCTTCATCCAGGTTTTGCATCCCCGGAAGTTCAGTTTGATCAGTGCCTGGCATTTGATTCTCCATTTGGTAACAATACCAATGAAAATGTTGACATAAGATTTGAGTCCCCCTTGCACTTGGCACCGGCTGATTATAATGTTATGGACCAGCCGCCGAAGCAAGATGCATCCCTTTGGTTCCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0000976 GO:0001067 GO:0001666 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009755 GO:0009756 GO:0009873 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010182 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0035556 GO:0036293 GO:0042221 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071369 GO:0071495 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

EIN3

Protein Analysis

612

Amino Acids

68.99

Weight (kDa)

5.67

Isoelectric Point (pI)

57.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EIN3_DNA-bd	PF04873	47 - 294	7.6e-132	Ethylene insensitive 3, DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001963)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27050 AT3G20770
fragaria_vesca	FvH4_1g28720 FvH4_1g28720 FvH4_7g04940 FvH4_7g04940 FvH4_7g04940 FvH4_7g04940 FvH4_7g04940
malus_domestica	MD02G1266200.v1.1 MD02G1266300.v1.1 MD07G1053500.v1.1 MD07G1053800.v1.1 MD08G1245800.v1.1 MD15G1441000.v1.1
prunus_persica	Prupe.2G058400_v2.0.a1 Prupe.2G058500_v2.0.a1 Prupe.2G070300_v2.0.a1
pyrus_communis	pycom02g22750 pycom02g22760 pycom07g04140 pycom07g04160 pycom08g21330 pycom15g38880
rosa_chinensis	RchiOBHm_Chr1g0331011 RchiOBHm_Chr5g0049961
rosa_laevigata	RLG00000029759 RLG00000034672
rosa_multiflora	Rmu_sc0000333.1_g000038 Rmu_sc0013622.1_g000002 Rmu_sc0013622.1_g000003
rosa_roxburghii	Rroxscaffold_1G00031290 Rroxscaffold_4G00319550
rosa_rugosa	Rorug01G0091600 Rorug05G0255200
rosa_samantha	Rh1AG113300 Rh1BG087200 Rh1CG110200 Rh1DG118900 Rh5AG329100 Rh5BG339600 Rh5CG365600 Rh5DG352200
rosa_wichuraiana	Rw1G009240 Rw5G031070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1785
AarI	CACCTGC	2 cut(s)	1190, 1384
Acc36I	ACCTGC	2 cut(s)	1190, 1384
Acc65I	GGTACC	1 cut(s)	959
AccB1I	GGYRCC	5 cut(s)	52, 380, 959, 1075, 1771
AccB7I	CCANNNNNTGG	2 cut(s)	377, 929
AccII	CGCG	1 cut(s)	892
AciI	CCGC	5 cut(s)	793, 939, 1308, 1540, 1802
AclWI	GGATC	4 cut(s)	14, 581, 693, 784
AcuI	CTGAAG	2 cut(s)	743, 1164
AcyI	GRCGYC	2 cut(s)	53, 381
AfaI	GTAC	1 cut(s)	961
AfiI	CCNNNNNNNGG	6 cut(s)	361, 362, 377, 633, 929, 932
AflIII	ACRYGT	2 cut(s)	768, 1623
AgsI	TTSAA	5 cut(s)	181, 474, 1007, 1042, 1261
AjnI	CCWGG	5 cut(s)	478, 873, 1404, 1657, 1695
AleI	CACNNNNGTG	1 cut(s)	634
Alw26I	GTCTC	1 cut(s)	948
AlwI	GGATC	4 cut(s)	14, 581, 693, 784
AlwNI	CAGNNNCTG	1 cut(s)	1696
AoxI	GGCC	3 cut(s)	638, 662, 1635
ApeKI	GCWGC	6 cut(s)	74, 98, 443, 577, 1135, 1549
ArsI	GACNNNNNNTTYG	2 cut(s)	1733, 1765
Asp700I	GAANNNNTTC	1 cut(s)	1175
Asp718I	GGTACC	1 cut(s)	959
AspA2I	CCTAGG	1 cut(s)	1219
AspLEI	GCGC	4 cut(s)	55, 383, 851, 892
AspS9I	GGNCC	4 cut(s)	437, 692, 1636, 1795
AsuC2I	CCSGG	1 cut(s)	1673
AsuHPI	GGTGA	5 cut(s)	80, 751, 765, 1171, 1244
AsuNHI	GCTAGC	1 cut(s)	859
AvaII	GGWCC	3 cut(s)	437, 692, 1795
AvrII	CCTAGG	1 cut(s)	1219
BaeGI	GKGCMC	2 cut(s)	280, 1202
BanI	GGYRCC	5 cut(s)	52, 380, 959, 1075, 1771
BbsI	GAAGAC	1 cut(s)	498
BbvI	GCAGC	6 cut(s)	86, 110, 430, 589, 1147, 1561
BccI	CCATC	4 cut(s)	64, 278, 307, 1594
BceAI	ACGGC	2 cut(s)	66, 768
BcgI	CGANNNNNNTGC	2 cut(s)	1220, 1254
BciT130I	CCWGG	5 cut(s)	480, 875, 1406, 1659, 1697
BclI	TGATCA	1 cut(s)	1687
BcnI	CCSGG	1 cut(s)	1673
BcoDI	GTCTC	1 cut(s)	948
BfaI	CTAG	2 cut(s)	860, 1220
BfmI	CTRYAG	2 cut(s)	496, 527
BfoI	RGCGCY	3 cut(s)	56, 384, 852
BfuAI	ACCTGC	2 cut(s)	1190, 1384
BisI	GCNGC	7 cut(s)	75, 99, 444, 578, 1136, 1550, 1802
BlnI	CCTAGG	1 cut(s)	1219
BlsI	GCNGC	7 cut(s)	76, 100, 445, 579, 1137, 1551, 1803
Bme1390I	CCNGG	6 cut(s)	480, 875, 1406, 1659, 1673, 1697
Bme18I	GGWCC	3 cut(s)	437, 692, 1795
BmgT120I	GGNCC	4 cut(s)	437, 692, 1636, 1795
BmiI	GGNNCC	8 cut(s)	54, 382, 693, 961, 1077, 1638, 1773, 1829
BmrFI	CCNGG	6 cut(s)	480, 875, 1406, 1659, 1673, 1697
BmsI	GCATC	5 cut(s)	61, 564, 1676, 1804, 1826
BmtI	GCTAGC	1 cut(s)	863
BpiI	GAAGAC	1 cut(s)	498
BplI	GAGNNNNNCTC	2 cut(s)	1094, 1126
BpmI	CTGGAG	1 cut(s)	63
Bpu10I	CCTNAGC	2 cut(s)	330, 840
BpuEI	CTTGAG	1 cut(s)	167
BpuMI	CCSGG	1 cut(s)	1673
BsaBI	GATNNNNATC	1 cut(s)	1103
BsaHI	GRCGYC	2 cut(s)	53, 381
BsaI	GGTCTC	1 cut(s)	948
BsaJI	CCNNGG	7 cut(s)	478, 479, 609, 632, 681, 1219, 1671
Bsc4I	CCNNNNNNNGG	6 cut(s)	361, 362, 377, 633, 929, 932
Bse118I	RCCGGY	2 cut(s)	925, 1774
Bse1I	ACTGG	6 cut(s)	371, 649, 963, 1255, 1397, 1638
Bse3DI	GCAATG	1 cut(s)	1362
Bse8I	GATNNNNATC	1 cut(s)	1103
BseBI	CCWGG	5 cut(s)	480, 875, 1406, 1659, 1697
BseDI	CCNNGG	7 cut(s)	478, 479, 609, 632, 681, 1219, 1671
BseGI	GGATG	7 cut(s)	139, 162, 1605, 1609, 1654, 1667, 1817
BseJI	GATNNNNATC	1 cut(s)	1103
BseLI	CCNNNNNNNGG	6 cut(s)	361, 362, 377, 633, 929, 932
BseMI	GCAATG	1 cut(s)	1362
BseMII	CTCAG	3 cut(s)	344, 1094, 1452
BseNI	ACTGG	6 cut(s)	371, 649, 963, 1255, 1397, 1638
BseRI	GAGGAG	3 cut(s)	122, 166, 507
BseSI	GKGCMC	2 cut(s)	280, 1202
BseXI	GCAGC	6 cut(s)	86, 110, 430, 589, 1147, 1561
BsgI	GTGCAG	2 cut(s)	522, 1362
Bsh1236I	CGCG	1 cut(s)	892
BshFI	GGCC	3 cut(s)	640, 664, 1637
BshNI	GGYRCC	5 cut(s)	52, 380, 959, 1075, 1771
BsiSI	CCGG	4 cut(s)	440, 926, 1673, 1775
BslFI	GGGAC	2 cut(s)	1443, 1741
BslI	CCNNNNNNNGG	6 cut(s)	361, 362, 377, 633, 929, 932
BsmAI	GTCTC	1 cut(s)	948
BsmFI	GGGAC	2 cut(s)	1443, 1741
BsmI	GAATGC	1 cut(s)	177
BsnI	GGCC	3 cut(s)	640, 664, 1637
Bso31I	GGTCTC	1 cut(s)	948
Bsp1286I	GDGCHC	2 cut(s)	280, 1202
BspACI	CCGC	5 cut(s)	793, 939, 1308, 1540, 1802
BspANI	GGCC	3 cut(s)	640, 664, 1637
BspCNI	CTCAG	3 cut(s)	343, 1093, 1453
BspFNI	CGCG	1 cut(s)	892
BspHI	TCATGA	2 cut(s)	715, 1207
BspLI	GGNNCC	8 cut(s)	54, 382, 693, 961, 1077, 1638, 1773, 1829
BspMAI	CTGCAG	1 cut(s)	500
BspMI	ACCTGC	2 cut(s)	1190, 1384
BspOI	GCTAGC	1 cut(s)	863
BspPI	GGATC	4 cut(s)	14, 581, 693, 784
BspT107I	GGYRCC	5 cut(s)	52, 380, 959, 1075, 1771
BspTNI	GGTCTC	1 cut(s)	948
BsrDI	GCAATG	1 cut(s)	1362
BsrFI	RCCGGY	2 cut(s)	925, 1774
BsrI	ACTGG	6 cut(s)	371, 649, 963, 1255, 1397, 1638
BssAI	RCCGGY	2 cut(s)	925, 1774
BssECI	CCNNGG	7 cut(s)	478, 479, 609, 632, 681, 1219, 1671
BssNI	GRCGYC	2 cut(s)	53, 381
BssT1I	CCWWGG	4 cut(s)	609, 632, 681, 1219
Bst2UI	CCWGG	5 cut(s)	480, 875, 1406, 1659, 1697
Bst6I	CTCTTC	2 cut(s)	176, 1032
BstACI	GRCGYC	2 cut(s)	53, 381
BstC8I	GCNNGC	3 cut(s)	399, 797, 861
BstDEI	CTNAG	6 cut(s)	201, 330, 453, 840, 1080, 1461
BstF5I	GGATG	7 cut(s)	139, 162, 1605, 1609, 1654, 1667, 1817
BstFNI	CGCG	1 cut(s)	892
BstH2I	RGCGCY	3 cut(s)	56, 384, 852
BstHHI	GCGC	4 cut(s)	55, 383, 851, 892
BstMAI	GTCTC	1 cut(s)	948
BstMWI	GCNNNNNNNGC	1 cut(s)	1807
BstNI	CCWGG	5 cut(s)	480, 875, 1406, 1659, 1697
BstNSI	RCATGY	2 cut(s)	772, 1627
BstSCI	CCNGG	6 cut(s)	478, 873, 1404, 1657, 1671, 1695
BstSFI	CTRYAG	2 cut(s)	496, 527
BstSLI	GKGCMC	2 cut(s)	280, 1202
BstUI	CGCG	1 cut(s)	892
BstV1I	GCAGC	6 cut(s)	86, 110, 430, 589, 1147, 1561
BstV2I	GAAGAC	1 cut(s)	498
BstX2I	RGATCY	2 cut(s)	6, 789
BstXI	CCANNNNNNTGG	1 cut(s)	636
BstYI	RGATCY	2 cut(s)	6, 789
BsuRI	GGCC	3 cut(s)	640, 664, 1637
BtsCI	GGATG	7 cut(s)	139, 162, 1605, 1609, 1654, 1667, 1817
BtsI	GCAGTG	5 cut(s)	108, 505, 510, 580, 1202
BveI	ACCTGC	2 cut(s)	1190, 1384
Cac8I	GCNNGC	3 cut(s)	399, 797, 861
CaiI	CAGNNNCTG	1 cut(s)	1696
CciI	TCATGA	2 cut(s)	715, 1207
CfoI	GCGC	4 cut(s)	55, 383, 851, 892
Cfr10I	RCCGGY	2 cut(s)	925, 1774
Cfr13I	GGNCC	4 cut(s)	437, 692, 1636, 1795
CseI	GACGC	2 cut(s)	224, 1620
Csp6I	GTAC	1 cut(s)	960
CviAII	CATG	6 cut(s)	86, 402, 716, 769, 1208, 1624
CviQI	GTAC	1 cut(s)	960
DdeI	CTNAG	6 cut(s)	201, 330, 453, 840, 1080, 1461
DinI	GGCGCC	2 cut(s)	54, 382
DraI	TTTAAA	1 cut(s)	672
Eam1104I	CTCTTC	2 cut(s)	176, 1032
EarI	CTCTTC	2 cut(s)	176, 1032
Eco130I	CCWWGG	4 cut(s)	609, 632, 681, 1219
Eco31I	GGTCTC	1 cut(s)	948
Eco32I	GATATC	1 cut(s)	781
Eco47I	GGWCC	3 cut(s)	437, 692, 1795
Eco57I	CTGAAG	2 cut(s)	743, 1164
EcoO109I	RGGNCCY	1 cut(s)	692
EcoRII	CCWGG	5 cut(s)	478, 873, 1404, 1657, 1695
EcoRV	GATATC	1 cut(s)	781
EcoT14I	CCWWGG	4 cut(s)	609, 632, 681, 1219
EcoT22I	ATGCAT	1 cut(s)	1819
EgeI	GGCGCC	2 cut(s)	54, 382
EheI	GGCGCC	2 cut(s)	54, 382
ErhI	CCWWGG	4 cut(s)	609, 632, 681, 1219
FaeI	CATG	6 cut(s)	89, 405, 719, 772, 1211, 1627
FaqI	GGGAC	2 cut(s)	1443, 1741
FatI	CATG	6 cut(s)	85, 401, 715, 768, 1207, 1623
FauI	CCCGC	1 cut(s)	932
FbaI	TGATCA	1 cut(s)	1687
Fnu4HI	GCNGC	7 cut(s)	75, 99, 444, 578, 1136, 1550, 1802
FokI	GGATG	7 cut(s)	146, 169, 1612, 1616, 1641, 1654, 1804
Fsp4HI	GCNGC	7 cut(s)	75, 99, 444, 578, 1136, 1550, 1802
FspBI	CTAG	2 cut(s)	860, 1220
GlaI	GCGC	4 cut(s)	54, 382, 850, 891
GluI	GCNGC	7 cut(s)	75, 99, 444, 578, 1136, 1550, 1802
GsuI	CTGGAG	1 cut(s)	63
HaeII	RGCGCY	3 cut(s)	56, 384, 852
HaeIII	GGCC	3 cut(s)	640, 664, 1637
HapII	CCGG	4 cut(s)	440, 926, 1673, 1775
HgaI	GACGC	2 cut(s)	224, 1620
HhaI	GCGC	4 cut(s)	55, 383, 851, 892
Hin1I	GRCGYC	2 cut(s)	53, 381
Hin1II	CATG	6 cut(s)	89, 405, 719, 772, 1211, 1627
Hin6I	GCGC	4 cut(s)	53, 381, 849, 890
HinP1I	GCGC	4 cut(s)	53, 381, 849, 890
HincII	GTYRAC	3 cut(s)	220, 1391, 1741
HindII	GTYRAC	3 cut(s)	220, 1391, 1741
HindIII	AAGCTT	3 cut(s)	797, 882, 1318
HinfI	GANTC	4 cut(s)	288, 1350, 1706, 1754
HpaII	CCGG	4 cut(s)	440, 926, 1673, 1775
HphI	GGTGA	5 cut(s)	80, 751, 765, 1171, 1244
Hpy166II	GTNNAC	6 cut(s)	220, 557, 917, 1391, 1402, 1741
Hpy188III	TCNNGA	9 cut(s)	38, 80, 292, 716, 905, 1208, 1229, 1273, 1428
Hpy8I	GTNNAC	6 cut(s)	220, 557, 917, 1391, 1402, 1741
HpyAV	CCTTC	6 cut(s)	59, 252, 403, 721, 730, 888
HpyCH4IV	ACGT	2 cut(s)	601, 975
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1807
HpyF3I	CTNAG	6 cut(s)	201, 330, 453, 840, 1080, 1461
HpySE526I	ACGT	2 cut(s)	601, 975
Hsp92I	GRCGYC	2 cut(s)	53, 381
Hsp92II	CATG	6 cut(s)	89, 405, 719, 772, 1211, 1627
HspAI	GCGC	4 cut(s)	53, 381, 849, 890
KasI	GGCGCC	2 cut(s)	52, 380
KpnI	GGTACC	1 cut(s)	963
Ksp22I	TGATCA	1 cut(s)	1687
LmnI	GCTCC	1 cut(s)	82
Lsp1109I	GCAGC	6 cut(s)	86, 110, 430, 589, 1147, 1561
LweI	GCATC	5 cut(s)	61, 564, 1676, 1804, 1826
MaeI	CTAG	2 cut(s)	860, 1220
MaeII	ACGT	2 cut(s)	601, 975
MaeIII	GTNAC	4 cut(s)	240, 270, 771, 1718
MflI	RGATCY	2 cut(s)	6, 789
MhlI	GDGCHC	2 cut(s)	280, 1202
MluCI	AATT	4 cut(s)	348, 447, 1261, 1279
Mly113I	GGCGCC	2 cut(s)	53, 381
MlyI	GAGTC	1 cut(s)	1763
Mph1103I	ATGCAT	1 cut(s)	1819
MroXI	GAANNNNTTC	1 cut(s)	1175
MseI	TTAA	5 cut(s)	671, 1032, 1086, 1163, 1419
MslI	CAYNNNNRTG	3 cut(s)	634, 672, 1622
MspA1I	CMGCKG	1 cut(s)	1138
MspI	CCGG	4 cut(s)	440, 926, 1673, 1775
MspR9I	CCNGG	6 cut(s)	480, 875, 1406, 1659, 1673, 1697
Mva1269I	GAATGC	1 cut(s)	177
MvaI	CCWGG	5 cut(s)	480, 875, 1406, 1659, 1697
MvnI	CGCG	1 cut(s)	892
MwoI	GCNNNNNNNGC	1 cut(s)	1807
NarI	GGCGCC	2 cut(s)	53, 381
NciI	CCSGG	1 cut(s)	1673
NheI	GCTAGC	1 cut(s)	859
NlaIII	CATG	6 cut(s)	89, 405, 719, 772, 1211, 1627
NlaIV	GGNNCC	8 cut(s)	54, 382, 693, 961, 1077, 1638, 1773, 1829
NmuCI	GTSAC	3 cut(s)	240, 270, 771
NsiI	ATGCAT	1 cut(s)	1819
NspI	RCATGY	2 cut(s)	772, 1627
OliI	CACNNNNGTG	1 cut(s)	634
PagI	TCATGA	2 cut(s)	715, 1207
PaqCI	CACCTGC	2 cut(s)	1190, 1384
PasI	CCCWGGG	1 cut(s)	479
PciI	ACATGT	2 cut(s)	768, 1623
PctI	GAATGC	1 cut(s)	177
PdmI	GAANNNNTTC	1 cut(s)	1175
PfeI	GAWTC	3 cut(s)	288, 1350, 1706
PflFI	GACNNNGTC	1 cut(s)	234
PflMI	CCANNNNNTGG	2 cut(s)	377, 929
PkrI	GCNGC	7 cut(s)	76, 100, 445, 579, 1137, 1551, 1803
PleI	GAGTC	1 cut(s)	1762
PluTI	GGCGCC	2 cut(s)	56, 384
PpsI	GAGTC	1 cut(s)	1762
PpuMI	RGGWCCY	1 cut(s)	692
PscI	ACATGT	2 cut(s)	768, 1623
PsiI	TTATAA	1 cut(s)	1785
Psp5II	RGGWCCY	1 cut(s)	692
Psp6I	CCWGG	5 cut(s)	478, 873, 1404, 1657, 1695
PspGI	CCWGG	5 cut(s)	478, 873, 1404, 1657, 1695
PspN4I	GGNNCC	8 cut(s)	54, 382, 693, 961, 1077, 1638, 1773, 1829
PspPI	GGNCC	4 cut(s)	437, 692, 1636, 1795
PspPPI	RGGWCCY	1 cut(s)	692
PstI	CTGCAG	1 cut(s)	500
PstNI	CAGNNNCTG	1 cut(s)	1696
PsuI	RGATCY	2 cut(s)	6, 789
PsyI	GACNNNGTC	1 cut(s)	234
PvuII	CAGCTG	1 cut(s)	1138
RsaI	GTAC	1 cut(s)	961
RsaNI	GTAC	1 cut(s)	960
RseI	CAYNNNNRTG	3 cut(s)	634, 672, 1622
SaqAI	TTAA	5 cut(s)	671, 1032, 1086, 1163, 1419
SatI	GCNGC	7 cut(s)	75, 99, 444, 578, 1136, 1550, 1802
Sau96I	GGNCC	4 cut(s)	437, 692, 1636, 1795
SchI	GAGTC	1 cut(s)	1763
ScrFI	CCNGG	6 cut(s)	480, 875, 1406, 1659, 1673, 1697
SduI	GDGCHC	2 cut(s)	280, 1202
SfaNI	GCATC	5 cut(s)	61, 564, 1676, 1804, 1826
SfcI	CTRYAG	2 cut(s)	496, 527
SfoI	GGCGCC	2 cut(s)	54, 382
SinI	GGWCC	3 cut(s)	437, 692, 1795
SmiI	ATTTAAAT	1 cut(s)	672
SmiMI	CAYNNNNRTG	3 cut(s)	634, 672, 1622
SmlI	CTYRAG	1 cut(s)	146
SmoI	CTYRAG	1 cut(s)	146
Sse9I	AATT	4 cut(s)	348, 447, 1261, 1279
SsiI	CCGC	5 cut(s)	793, 939, 1308, 1540, 1802
SspDI	GGCGCC	2 cut(s)	52, 380
SspI	AATATT	1 cut(s)	1489
SspMI	CTAG	2 cut(s)	860, 1220
StyD4I	CCNGG	6 cut(s)	478, 873, 1404, 1657, 1671, 1695
StyI	CCWWGG	4 cut(s)	609, 632, 681, 1219
SwaI	ATTTAAAT	1 cut(s)	672
TaiI	ACGT	2 cut(s)	604, 978
TaqI	TCGA	4 cut(s)	169, 256, 1230, 1443
TasI	AATT	4 cut(s)	348, 447, 1261, 1279
TauI	GCSGC	1 cut(s)	1804
TfiI	GAWTC	3 cut(s)	288, 1350, 1706
Tru1I	TTAA	5 cut(s)	671, 1032, 1086, 1163, 1419
Tru9I	TTAA	5 cut(s)	671, 1032, 1086, 1163, 1419
TseFI	GTSAC	3 cut(s)	240, 270, 771
TseI	GCWGC	6 cut(s)	74, 98, 443, 577, 1135, 1549
Tsp45I	GTSAC	3 cut(s)	240, 270, 771
TspDTI	ATGAA	8 cut(s)	102, 138, 504, 1257, 1481, 1589, 1643, 1746
Tth111I	GACNNNGTC	1 cut(s)	234
Van91I	CCANNNNNTGG	2 cut(s)	377, 929
VpaK11BI	GGWCC	3 cut(s)	437, 692, 1795
XceI	RCATGY	2 cut(s)	772, 1627
XmaJI	CCTAGG	1 cut(s)	1219
XmnI	GAANNNNTTC	1 cut(s)	1175
XspI	CTAG	2 cut(s)	860, 1220
Zsp2I	ATGCAT	1 cut(s)	1819

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.