Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001963

Physical Location & Seq

Genomic Coordinates Forward (+)

28425018 .. 28428086

Gene Structure 3069 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0255200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGGGCATTCTTTCATTCATTTTCATTGGAGTTTACTTCTTAAAAATCTCAATTTTAGCTGATTCCATTTCCAGCCATGGAGGATATGAATTGGGTTTCTTGAGTAGACCAAAGGGTGTTCATAGGAGGAGTCTTTTGGCCTCAACTTCTGGAGACTATTGTGACAACAATGACCTTTGTGGCCCCAATGGAATGTGTGTCATCAGCAATTCACCGGTTTGTACTTGTTTAAATGGGTTTGAACCCAAGGCACCAGAAAAATATAACTCTGGGGACTATTCAGGTGGTTGTGTCCAGGCTCAACCTTCCAACTGCCAAAATAAGGATGATGGGTTTGAGATATATGCTGGGGTCAAATTGCCAGATACCACAGATTCTCGGGCTAACCAGAGTATGAGTGTCGAGGACTGCAGGGGAAATTGCTTGAACAACTGTACTTGTGTGGCTTATGCAAGCTCTAGTGTCAATGGCTGCACTATCTGGTTTGGTGATTTAAACAACATTAGGAAGCTTTCAGATGGTGGGGAGGATCTGAACATTCGAATACCTGCTTCAGAATTAAAGAAAAACCACTCACTTAAGACAAAGATAGCGGTGATTGTTGCATCTGTTGTTGCGGTTGTCATTGGGATGCTCTTGGTTGCGTATTGCATTCACAGGAGGAGAACAAAATTCAAAGAGAAAATGGGAAAGAATGGAATGACGAATCAGAACTATGATGGACAGAACGAAGACATCGAGCTACCAATATTTAGTTTGTCCACAATAGTCACAGCCACTGATAACTTTTCATTCAACATGAAACTTGGAGAAGGTGGCTTTGGGCCTGTATACAAGGGTAGTCTAGTGGATGGGCAAGAAATTGCTGTGAAGAGACTCTCACGAAGTTCAGGGCAAGGACCAACCGAGTTCAAAAATGAAGTACTACTAATAGCCAAACTTCAGCACCGAAATCTTGTAAGGCTCCTAGGTTGTTGCATTGAGGGAGAAGAAAGATTGTTGATTTATGAATACATGCCCAACAACAGCTTGGACTTCTACCTTTTCGATGAAAATCGAGCAAGACTATTGGCTTGGCCTCAACGCTTTCACATTATCTGTGGGATAGCCAGAGGTCTTCTTTATCTACATCAAGACTCCAGATTGCGGATTATTCATAGAGATCTTAAAGCAAGTAATGTTTTGCTTGATAAGGAGATGAACCCAAAAATCTCAGACTTTGGCATGGCTAGAACATTTGGAGGAGATCAGACTGAAGGAGTTACAAGAAGAGTTGTTGGAACCTATGGTTATATGGCACCAGAATATGCAATTGATGGTAAATTCTCTGTAAAATCGGATGTTTTTAGTTTTGGCATTTTATTGTTGGAAACATTAAGCGGGAAGCGAAGTAGAGGATTTTATGATCCTGTTCATAACCTTAACCTCATTGGACATGCATGGCGATTGTGGAAAGAAGGAAGATCTTCGGAGTTGATTGATGGATGCTTAAGGGACTCCTGCAGTCTGTCAGAAATCTTGTGTTGCTTCCATATTAGTCTTTTATGTGTGCAAGAGCTTCCTGAGGACAGGCCAAATATTTCAACCGTGATTCTCATGTTAGGTGGTGGTTCTGCCTTGCCTCTTCCCAAAAAACCAGGTTTTTTCTGTAGAAGTTCATCTGAAGCAGATTCTTCTTCATGTGTGAATGCAACAACATCTTCAAGTAAGAATTATACATATTCAAACTATGACTCTACAATAACAGTATTGGAGGGTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0000976 GO:0001067 GO:0001666 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009755 GO:0009756 GO:0009873 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010182 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0035556 GO:0036293 GO:0042221 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071369 GO:0071495 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

EIN3

Protein Analysis

587

Amino Acids

64.73

Weight (kDa)

7.41

Isoelectric Point (pI)

52.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
S_locus_glycop	PF00954	47 - 83	4e-08	S-locus glycoprotein domain
PAN_2	PF08276	105 - 168	1.9e-16	PAN-like domain
Pkinase	PF00069	264 - 463	3.9e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	265 - 530	7.6e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001963)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27050 AT3G20770
fragaria_vesca	FvH4_1g28720 FvH4_1g28720 FvH4_7g04940 FvH4_7g04940 FvH4_7g04940 FvH4_7g04940 FvH4_7g04940
malus_domestica	MD02G1266200.v1.1 MD02G1266300.v1.1 MD07G1053500.v1.1 MD07G1053800.v1.1 MD08G1245800.v1.1 MD15G1441000.v1.1
prunus_persica	Prupe.2G058400_v2.0.a1 Prupe.2G058500_v2.0.a1 Prupe.2G070300_v2.0.a1
pyrus_communis	pycom02g22750 pycom02g22760 pycom07g04140 pycom07g04160 pycom08g21330 pycom15g38880
rosa_chinensis	RchiOBHm_Chr1g0331011 RchiOBHm_Chr5g0049961
rosa_laevigata	RLG00000029759 RLG00000034672
rosa_multiflora	Rmu_sc0000333.1_g000038 Rmu_sc0013622.1_g000002 Rmu_sc0013622.1_g000003
rosa_roxburghii	Rroxscaffold_1G00031290 Rroxscaffold_4G00319550
rosa_rugosa	Rorug01G0091600 Rorug05G0255200
rosa_samantha	Rh1AG113300 Rh1BG087200 Rh1CG110200 Rh1DG118900 Rh5AG329100 Rh5BG339600 Rh5CG365600 Rh5DG352200
rosa_wichuraiana	Rw1G009240 Rw5G031070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	556
AccB1I	GGYRCC	2 cut(s)	250, 1297
AccI	GTMKAC	2 cut(s)	106, 831
AciI	CCGC	4 cut(s)	593, 617, 1147, 1380
AclWI	GGATC	2 cut(s)	537, 1400
AcsI	RAATTY	2 cut(s)	671, 1322
AcuI	CTGAAG	4 cut(s)	537, 926, 1275, 1683
AfaI	GTAC	3 cut(s)	223, 436, 924
AfiI	CCNNNNNNNGG	2 cut(s)	322, 1146
AflII	CTTAAG	2 cut(s)	578, 1489
AgeI	ACCGGT	1 cut(s)	214
AgsI	TTSAA	8 cut(s)	242, 427, 676, 796, 913, 1584, 1704, 1725
AjnI	CCWGG	2 cut(s)	294, 1636
AjuI	GAANNNNNNNTTGG	2 cut(s)	804, 836
AluBI	AGCT	6 cut(s)	59, 456, 511, 742, 1029, 1558
AluI	AGCT	6 cut(s)	59, 456, 511, 742, 1029, 1558
Alw26I	GTCTC	2 cut(s)	147, 868
AlwI	GGATC	2 cut(s)	537, 1400
AlwNI	CAGNNNCTG	1 cut(s)	779
Ama87I	CYCGRG	1 cut(s)	378
AoxI	GGCC	5 cut(s)	138, 181, 824, 1076, 1571
ApeKI	GCWGC	1 cut(s)	471
ApoI	RAATTY	2 cut(s)	671, 1322
AsiGI	ACCGGT	1 cut(s)	214
Asp700I	GAANNNNTTC	1 cut(s)	1465
AspA2I	CCTAGG	1 cut(s)	967
AspS9I	GGNCC	3 cut(s)	182, 824, 899
AsuHPI	GGTGA	3 cut(s)	204, 500, 607
AsuII	TTCGAA	1 cut(s)	541
AvaI	CYCGRG	1 cut(s)	378
AvaII	GGWCC	1 cut(s)	899
AvrII	CCTAGG	1 cut(s)	967
AxyI	CCTNAGG	1 cut(s)	1563
BanI	GGYRCC	2 cut(s)	250, 1297
BbsI	GAAGAC	2 cut(s)	738, 1109
BbvI	GCAGC	1 cut(s)	458
BccI	CCATC	6 cut(s)	323, 512, 713, 845, 1310, 1475
BciT130I	CCWGG	2 cut(s)	296, 1638
BcoDI	GTCTC	2 cut(s)	147, 868
BfaI	CTAG	4 cut(s)	459, 845, 968, 1230
BfmI	CTRYAG	3 cut(s)	409, 1501, 1648
BfrI	CTTAAG	2 cut(s)	578, 1489
BfuAI	ACCTGC	1 cut(s)	556
BglII	AGATCT	2 cut(s)	1162, 1463
BisI	GCNGC	1 cut(s)	472
BlnI	CCTAGG	1 cut(s)	967
BlsI	GCNGC	1 cut(s)	473
BmcAI	AGTACT	1 cut(s)	924
Bme1390I	CCNGG	2 cut(s)	296, 1638
Bme18I	GGWCC	1 cut(s)	899
BmeT110I	CYCGRG	1 cut(s)	378
BmgT120I	GGNCC	3 cut(s)	182, 824, 899
BmiI	GGNNCC	5 cut(s)	184, 252, 965, 1282, 1299
BmrFI	CCNGG	2 cut(s)	296, 1638
BmsI	GCATC	3 cut(s)	614, 621, 1475
BpiI	GAAGAC	2 cut(s)	738, 1109
BpmI	CTGGAG	2 cut(s)	171, 1123
Bpu14I	TTCGAA	1 cut(s)	541
BpuEI	CTTGAG	1 cut(s)	121
BsaBI	GATNNNNATC	1 cut(s)	1053
BsaJI	CCNNGG	3 cut(s)	76, 246, 967
BsaWI	WCCGGW	1 cut(s)	214
Bsc4I	CCNNNNNNNGG	2 cut(s)	322, 1146
Bse118I	RCCGGY	1 cut(s)	214
Bse21I	CCTNAGG	1 cut(s)	1563
Bse8I	GATNNNNATC	1 cut(s)	1053
BseBI	CCWGG	2 cut(s)	296, 1638
BseDI	CCNNGG	3 cut(s)	76, 246, 967
BseGI	GGATG	5 cut(s)	331, 636, 856, 1345, 1490
BseJI	GATNNNNATC	1 cut(s)	1053
BseLI	CCNNNNNNNGG	2 cut(s)	322, 1146
BseMII	CTCAG	2 cut(s)	1227, 1554
BseRI	GAGGAG	3 cut(s)	142, 676, 1257
BseXI	GCAGC	1 cut(s)	458
BseYI	CCCAGC	1 cut(s)	347
BsgI	GTGCAG	1 cut(s)	457
BshFI	GGCC	5 cut(s)	140, 183, 826, 1078, 1573
BshNI	GGYRCC	2 cut(s)	250, 1297
BshTI	ACCGGT	1 cut(s)	214
BsiHKCI	CYCGRG	1 cut(s)	378
BsiSI	CCGG	1 cut(s)	215
BslFI	GGGAC	2 cut(s)	287, 1508
BslI	CCNNNNNNNGG	2 cut(s)	322, 1146
BsmAI	GTCTC	2 cut(s)	147, 868
BsmFI	GGGAC	2 cut(s)	287, 1508
BsmI	GAATGC	3 cut(s)	6, 651, 1693
BsnI	GGCC	5 cut(s)	140, 183, 826, 1078, 1573
BsoBI	CYCGRG	1 cut(s)	378
Bsp119I	TTCGAA	1 cut(s)	541
Bsp143I	GATC	5 cut(s)	529, 1162, 1246, 1405, 1463
Bsp19I	CCATGG	1 cut(s)	76
BspACI	CCGC	4 cut(s)	593, 617, 1147, 1380
BspANI	GGCC	5 cut(s)	140, 183, 826, 1078, 1573
BspCNI	CTCAG	2 cut(s)	1226, 1555
BspLI	GGNNCC	5 cut(s)	184, 252, 965, 1282, 1299
BspMAI	CTGCAG	2 cut(s)	413, 1505
BspMI	ACCTGC	1 cut(s)	556
BspPI	GGATC	2 cut(s)	537, 1400
BspT104I	TTCGAA	1 cut(s)	541
BspT107I	GGYRCC	2 cut(s)	250, 1297
BspTI	CTTAAG	2 cut(s)	578, 1489
BsrFI	RCCGGY	1 cut(s)	214
BssAI	RCCGGY	1 cut(s)	214
BssECI	CCNNGG	3 cut(s)	76, 246, 967
BssMI	GATC	5 cut(s)	529, 1162, 1246, 1405, 1463
BssNAI	GTATAC	1 cut(s)	832
BssT1I	CCWWGG	3 cut(s)	76, 246, 967
Bst1107I	GTATAC	1 cut(s)	832
Bst2UI	CCWGG	2 cut(s)	296, 1638
Bst4CI	ACNGT	3 cut(s)	434, 1588, 1747
Bst6I	CTCTTC	3 cut(s)	866, 1264, 1629
BstAFI	CTTAAG	2 cut(s)	578, 1489
BstBI	TTCGAA	1 cut(s)	541
BstC8I	GCNNGC	1 cut(s)	454
BstDEI	CTNAG	2 cut(s)	1213, 1563
BstDSI	CCRYGG	1 cut(s)	76
BstF5I	GGATG	5 cut(s)	331, 636, 856, 1345, 1490
BstKTI	GATC	5 cut(s)	532, 1165, 1249, 1408, 1466
BstMAI	GTCTC	2 cut(s)	147, 868
BstMBI	GATC	5 cut(s)	529, 1162, 1246, 1405, 1463
BstNI	CCWGG	2 cut(s)	296, 1638
BstNSI	RCATGY	2 cut(s)	1018, 1439
BstSCI	CCNGG	2 cut(s)	294, 1636
BstSFI	CTRYAG	3 cut(s)	409, 1501, 1648
BstV1I	GCAGC	1 cut(s)	458
BstV2I	GAAGAC	2 cut(s)	738, 1109
BstX2I	RGATCY	3 cut(s)	529, 1162, 1463
BstYI	RGATCY	3 cut(s)	529, 1162, 1463
BstZ17I	GTATAC	1 cut(s)	832
Bsu36I	CCTNAGG	1 cut(s)	1563
BsuRI	GGCC	5 cut(s)	140, 183, 826, 1078, 1573
BtgI	CCRYGG	1 cut(s)	76
BtsCI	GGATG	5 cut(s)	331, 636, 856, 1345, 1490
BtsIMutI	CAGTG	1 cut(s)	777
BveI	ACCTGC	1 cut(s)	556
Cac8I	GCNNGC	1 cut(s)	454
CaiI	CAGNNNCTG	1 cut(s)	779
Cfr10I	RCCGGY	1 cut(s)	214
Cfr13I	GGNCC	3 cut(s)	182, 824, 899
CsiI	ACCWGGT	1 cut(s)	1636
Csp6I	GTAC	3 cut(s)	222, 435, 923
CspAI	ACCGGT	1 cut(s)	214
CviAII	CATG	8 cut(s)	77, 799, 1015, 1225, 1436, 1440, 1597, 1680
CviQI	GTAC	3 cut(s)	222, 435, 923
DdeI	CTNAG	2 cut(s)	1213, 1563
DpnI	GATC	5 cut(s)	531, 1164, 1248, 1407, 1465
DpnII	GATC	5 cut(s)	529, 1162, 1246, 1405, 1463
DraI	TTTAAA	2 cut(s)	231, 495
Eam1104I	CTCTTC	3 cut(s)	866, 1264, 1629
EarI	CTCTTC	3 cut(s)	866, 1264, 1629
Eco130I	CCWWGG	3 cut(s)	76, 246, 967
Eco47I	GGWCC	1 cut(s)	899
Eco57I	CTGAAG	4 cut(s)	537, 926, 1275, 1683
Eco81I	CCTNAGG	1 cut(s)	1563
Eco88I	CYCGRG	1 cut(s)	378
EcoRII	CCWGG	2 cut(s)	294, 1636
EcoT14I	CCWWGG	3 cut(s)	76, 246, 967
EcoT22I	ATGCAT	1 cut(s)	1441
ErhI	CCWWGG	3 cut(s)	76, 246, 967
FaeI	CATG	8 cut(s)	80, 802, 1018, 1228, 1439, 1443, 1600, 1683
FaqI	GGGAC	2 cut(s)	287, 1508
FatI	CATG	8 cut(s)	76, 798, 1014, 1224, 1435, 1439, 1596, 1679
FauI	CCCGC	1 cut(s)	1373
FblI	GTMKAC	2 cut(s)	106, 831
Fnu4HI	GCNGC	1 cut(s)	472
FokI	GGATG	5 cut(s)	338, 643, 863, 1352, 1497
Fsp4HI	GCNGC	1 cut(s)	472
FspBI	CTAG	4 cut(s)	459, 845, 968, 1230
GluI	GCNGC	1 cut(s)	472
GsaI	CCCAGC	1 cut(s)	351
GsuI	CTGGAG	2 cut(s)	171, 1123
HaeIII	GGCC	5 cut(s)	140, 183, 826, 1078, 1573
HapII	CCGG	1 cut(s)	215
Hin1II	CATG	8 cut(s)	80, 802, 1018, 1228, 1439, 1443, 1600, 1683
HindIII	AAGCTT	1 cut(s)	509
HpaII	CCGG	1 cut(s)	215
HphI	GGTGA	3 cut(s)	204, 500, 607
Hpy166II	GTNNAC	4 cut(s)	34, 107, 762, 832
Hpy188III	TCNNGA	6 cut(s)	100, 150, 882, 1133, 1140, 1562
Hpy8I	GTNNAC	4 cut(s)	34, 107, 762, 832
HpyAV	CCTTC	4 cut(s)	315, 806, 1250, 1451
HpyCH4III	ACNGT	3 cut(s)	434, 1588, 1747
HpyF3I	CTNAG	2 cut(s)	1213, 1563
Hsp92II	CATG	8 cut(s)	80, 802, 1018, 1228, 1439, 1443, 1600, 1683
Kzo9I	GATC	5 cut(s)	529, 1162, 1246, 1405, 1463
LmnI	GCTCC	1 cut(s)	969
Lsp1109I	GCAGC	1 cut(s)	458
LweI	GCATC	3 cut(s)	614, 621, 1475
MabI	ACCWGGT	1 cut(s)	1636
MaeI	CTAG	4 cut(s)	459, 845, 968, 1230
MaeIII	GTNAC	3 cut(s)	161, 769, 1261
MalI	GATC	5 cut(s)	531, 1164, 1248, 1407, 1465
MboI	GATC	5 cut(s)	529, 1162, 1246, 1405, 1463
MfeI	CAATTG	1 cut(s)	1311
MflI	RGATCY	3 cut(s)	529, 1162, 1463
MlyI	GAGTC	5 cut(s)	139, 870, 1130, 1490, 1727
MmeI	TCCRAC	3 cut(s)	333, 1258, 1347
Mph1103I	ATGCAT	1 cut(s)	1441
MroXI	GAANNNNTTC	1 cut(s)	1465
MseI	TTAA	9 cut(s)	41, 230, 494, 560, 579, 1167, 1376, 1422, 1490
MslI	CAYNNNNRTG	1 cut(s)	629
MspCI	CTTAAG	2 cut(s)	578, 1489
MspI	CCGG	1 cut(s)	215
MspR9I	CCNGG	2 cut(s)	296, 1638
MunI	CAATTG	1 cut(s)	1311
Mva1269I	GAATGC	3 cut(s)	6, 651, 1693
MvaI	CCWGG	2 cut(s)	296, 1638
NcoI	CCATGG	1 cut(s)	76
NdeII	GATC	5 cut(s)	529, 1162, 1246, 1405, 1463
NlaIII	CATG	8 cut(s)	80, 802, 1018, 1228, 1439, 1443, 1600, 1683
NlaIV	GGNNCC	5 cut(s)	184, 252, 965, 1282, 1299
NmuCI	GTSAC	2 cut(s)	161, 769
NsiI	ATGCAT	1 cut(s)	1441
NspI	RCATGY	2 cut(s)	1018, 1439
NspV	TTCGAA	1 cut(s)	541
PcsI	WCGNNNNNNNCGW	1 cut(s)	735
PctI	GAATGC	3 cut(s)	6, 651, 1693
PdmI	GAANNNNTTC	1 cut(s)	1465
PfeI	GAWTC	5 cut(s)	62, 374, 706, 1591, 1670
PinAI	ACCGGT	1 cut(s)	214
PkrI	GCNGC	1 cut(s)	473
PleI	GAGTC	5 cut(s)	138, 870, 1130, 1490, 1727
PpsI	GAGTC	5 cut(s)	138, 870, 1130, 1490, 1727
Psp6I	CCWGG	2 cut(s)	294, 1636
PspFI	CCCAGC	1 cut(s)	347
PspGI	CCWGG	2 cut(s)	294, 1636
PspN4I	GGNNCC	5 cut(s)	184, 252, 965, 1282, 1299
PspPI	GGNCC	3 cut(s)	182, 824, 899
PstI	CTGCAG	2 cut(s)	413, 1505
PstNI	CAGNNNCTG	1 cut(s)	779
PsuI	RGATCY	3 cut(s)	529, 1162, 1463
RsaI	GTAC	3 cut(s)	223, 436, 924
RsaNI	GTAC	3 cut(s)	222, 435, 923
RseI	CAYNNNNRTG	1 cut(s)	629
SaqAI	TTAA	9 cut(s)	41, 230, 494, 560, 579, 1167, 1376, 1422, 1490
SatI	GCNGC	1 cut(s)	472
Sau3AI	GATC	5 cut(s)	529, 1162, 1246, 1405, 1463
Sau96I	GGNCC	3 cut(s)	182, 824, 899
ScaI	AGTACT	1 cut(s)	924
SchI	GAGTC	5 cut(s)	139, 870, 1130, 1490, 1727
ScrFI	CCNGG	2 cut(s)	296, 1638
SexAI	ACCWGGT	1 cut(s)	1636
SfaNI	GCATC	3 cut(s)	614, 621, 1475
SfcI	CTRYAG	3 cut(s)	409, 1501, 1648
SfuI	TTCGAA	1 cut(s)	541
SinI	GGWCC	1 cut(s)	899
SmiMI	CAYNNNNRTG	1 cut(s)	629
SmlI	CTYRAG	3 cut(s)	100, 578, 1489
SmoI	CTYRAG	3 cut(s)	100, 578, 1489
SsiI	CCGC	4 cut(s)	593, 617, 1147, 1380
SspI	AATATT	2 cut(s)	750, 1579
SspMI	CTAG	4 cut(s)	459, 845, 968, 1230
StyD4I	CCNGG	2 cut(s)	294, 1636
StyI	CCWWGG	3 cut(s)	76, 246, 967
TaaI	ACNGT	3 cut(s)	434, 1588, 1747
TaqI	TCGA	6 cut(s)	402, 541, 738, 1047, 1057, 1759
TatI	WGTACW	3 cut(s)	221, 434, 922
TfiI	GAWTC	5 cut(s)	62, 374, 706, 1591, 1670
Tru1I	TTAA	9 cut(s)	41, 230, 494, 560, 579, 1167, 1376, 1422, 1490
Tru9I	TTAA	9 cut(s)	41, 230, 494, 560, 579, 1167, 1376, 1422, 1490
TscAI	CASTG	1 cut(s)	784
TseFI	GTSAC	2 cut(s)	161, 769
TseI	GCWGC	1 cut(s)	471
Tsp45I	GTSAC	2 cut(s)	161, 769
TspRI	CASTG	1 cut(s)	784
Vha464I	CTTAAG	2 cut(s)	578, 1489
VpaK11BI	GGWCC	1 cut(s)	899
XapI	RAATTY	2 cut(s)	671, 1322
XceI	RCATGY	2 cut(s)	1018, 1439
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1027
XmaJI	CCTAGG	1 cut(s)	967
XmiI	GTMKAC	2 cut(s)	106, 831
XmnI	GAANNNNTTC	1 cut(s)	1465
XspI	CTAG	4 cut(s)	459, 845, 968, 1230
ZrmI	AGTACT	1 cut(s)	924
Zsp2I	ATGCAT	1 cut(s)	1441

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.