AT2G32700

transcriptional corepressor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0001113
Physical Location & Seq
Forward (+)
13866721 .. 13872246
5526 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G32700.1

Sequence Viewer

Length: 2364 bp
ATGGCTCAGAGTAATTGGGAAGCTGACAAGATGCTTGATGTTTACATATATGATTATTTGGTGAAGAAGAAACTTCATAATACTGCTAAGTCGTTTATGACTGAAGGGAAGGTTTCTCCTGATCCAGTTGCAATTGATGCACCTGGAGGGTTTCTTTTTGAGTGGTGGTCTGTGTTTTGGGACATTTTCATTGCAAGGACGAATGAGAAGCATTCAGAGGCTGCTGCAGCTTATATAGAGGCACAACAAGGTAAAGCGAAGGAGCAGCAAATGCAAATACAGCAACTGCAGATGATGCGCCAAGCTCAAATGCAGCGTAGGGACCCTAATCATCCTTCTCTTGGCGGTCCAATGAATGCTATTGGTTCTGAAGGGATGATTGGGCAGTCTAATGCTAGTGCTTTGGCTGCTAAAATGTACGAGGAACGCATGAAGCAGCCTAATCCTATGAATTCTGAGACATCCCAACCTCATCTTGATGCAAGGATGGCCCTTCTTAAATCAGCAACAAACCATCATGGTCAGATTGTCCAAGGAAACCATCAAGGAGGTGTTTCGGCAGCGCTGCAGCAAATTCAATCACGAACTCAGCAGCCCACTGAAATCAAAACTGAAGTTAATTTGGGTACATCTCCAAGACAACTGCCAGTGGATCCTTCTACAGTTTATGGCCAGGGAATTCTGCAATCAAAGCCTGGGATGGGGAGTGCAGGATTAAACCCTGGAGTGAGTGGTCTTCCTTTAAAGGGATGGCCATTAACTGGCATCGAGCAGATGCGACCAGGTTTAGGAGGCCCTCAGGTTCAGAAATCTTTTCTACAAAATCAAAGTCAATTTCAGCTCTCGCCGCAGCAGCAACAACATCAGATGTTGGCTCAGGTTCAAGCGCAAGGAAATATGACTAATTCACCCATGTATGGTGGTGACATGGACCCTCGAAGATTTACAGGATTACCTAGAGGAAACCTTAATCCGAAAGATGGCCAACAAAATGCAAATGATGGATCTATAGGGTCCCCCATGCAGTCAAGTTCGTCAAAGCATATCAGCATGCCGCCAGTACAGCAATCTTCTTCTCAGCAACAAGATCACTTACTATCCCAGCAATCACAACAGAACAACCGCAAAAGAAAAGGGCCTTCCTCTTCTGGTCCTGCTAACAGCACAGGGACAGGAAACACTGTTGGCCCATCCAACTCACAGCCATCGACTCCGTCAACGCATACCCCTGTTGATGGAGTTGCTATAGCTGGTAACATGCACCATGTGAATAGCATGCCAAAAGGGCCAATGATGTATGGTTCTGATGGGATCGGTGGTCTTGCATCATCAGCAAATCAACTGCTGCAGGATGACATGGACCAGTTTGGAGATGTGGGAGCTCTAGAAGATAATGTAGAATCATTTTTGTCCCAAGATGATGGAGACGGAGGAAGCTTGTTTGGCACCCTAAAGCGGAACTCTTCTGTGCATACCGAAACCTCAAAGCCTTTCAGTTTCAATGAGGTTAGTTGTATAAGAAAAAGTGCCAGTAAGGTCATTTGCTGTAGCTTCTCATATGATGGGAAGTTGTTGGCTAGCGCTGGACATGATAAGAAGGTATTTATATGGAACATGGAAACACTACAAGTTGAGAGCACTCCGGAAGAACATGCTCATATCATCACAGATGTTCGCTTCAGACCGAATTCAACTCAACTGGCAACGTCATCATTCGACAAAACAATCAAAATCTGGGATGCTTCTGATCCTGGTTACTTCCTACGAACAATTTCTGGTCATGCTGCACCTGTTATGTCCATTGATTTTCATCCTAAGAAAACCGAGCTTTTATGCTCCTGTGATAGCAACAATGATATTCGCTTTTGGGACATAAACGCCTCTTGCGTTCGTGCTGTAAAGGGGGCTAGCACGCAAGTACGTTTCCAGCCAAGAACAGGACAGTTTTTAGCTGCAGCGTCAGAAAATACTGTGTCAATTTTTGATATTGAAAATAATAACAAACGGGTCAACATTTTTAAGGGACATTCCTCAAATGTACATTCTGTTTGTTGGAGCCCAAACGGAGAGTTGGTGGCGTCTGTTAGTGAAGACGCTGTAAAATTATGGTCACTGAGTTCAGGAGATTGCATCCACGAGCTTAGCAACAGTGGAAACAAGTTCCACTCTGTTGTTTTTCACCCTAGCTATCCCGATCTCTTGGTCATCGGTGGCTATCAGGCTATAGAGCTGTGGAACACAATGGAGAACAAATGTATGACGGTAGCAGGCCACGAGTGTGTGATCTCTGCCTTGGCTCAGTCGCCTTCGACGGGAGTGGTTGCGTCTGCAAGTCATGACAAATCCGTAAAGATTTGGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000271 GO:0001101 GO:0001666 GO:0003002 GO:0003006 GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005975 GO:0005976 GO:0006109 GO:0006355 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009664 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009827 GO:0009845 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009908 GO:0009909 GO:0009943 GO:0009944 GO:0009955 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010044 GO:0010073 GO:0010154 GO:0010191 GO:0010192 GO:0010214 GO:0010243 GO:0010272 GO:0010393 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0016043 GO:0016051 GO:0017144 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032501 GO:0032502 GO:0032504 GO:0032881 GO:0033554 GO:0036293 GO:0042221 GO:0042493 GO:0042545 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044424 GO:0044464 GO:0045229 GO:0045488 GO:0045489 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045995 GO:0046677 GO:0046898 GO:0047484 GO:0048316 GO:0048358 GO:0048359 GO:0048363 GO:0048367 GO:0048507 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048609 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051252 GO:0051253 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060992 GO:0061458 GO:0065001 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0080001 GO:0080090 GO:0080134 GO:0090351 GO:0090567 GO:0097305 GO:0140110 GO:1901000 GO:1901001 GO:1901576 GO:1901654 GO:1901698 GO:1901700 GO:1902066 GO:1902074 GO:1902183 GO:1902679 GO:1902680 GO:1903338 GO:1903506 GO:1903507 GO:1903508 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LisH WD40

Protein Analysis

787

Amino Acids

85.51

Weight (kDa)

6.6

Isoelectric Point (pI)

50.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LisH PF08513 10 - 36 1.6e-07 LisH
Beta-prop_CAF1B_HIR1 PF24105 498 - 626 7.4e-07 CAF1B/HIR1 beta-propeller domain
Beta-prop_TEP1_2nd PF25047 498 - 541 1.1e-07 TEP-1 second beta-propeller
WD40_Gbeta PF25391 498 - 632 9.9e-10 G protein beta WD-40 repeat protein
WD40_MABP1-WDR62_2nd PF24782 500 - 703 4.5e-13 MABP1/WDR62 second WD40 domain
EIF3I PF24805 500 - 582 6.8e-07 EIF3I
Beta-prop_EML PF23409 502 - 697 1.1e-10 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_THOC3 PF25174 503 - 547 2.3e-06 THOC3 beta-propeller domain
WD40_WDHD1_1st PF24817 505 - 583 5.4e-11 WDHD1 first WD40 domain
Beta-prop_WDR36-Utp21_1st PF25171 506 - 579 1e-05 WDR36/Utp21 first beta-propeller
Beta-prop_EML_2 PF23414 507 - 627 4.1e-15 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5 PF25175 509 - 638 2.4e-26 WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 509 - 583 3.7e-07 WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_1st PF25173 510 - 625 5.1e-20 WDR3 first beta-propeller domain
WD40_Prp19 PF24814 511 - 746 1.9e-37 Prp19 WD40 domain
WD40 PF00400 511 - 538 5.9e-06 WD domain, G-beta repeat
Beta-prop_WDR3_2nd PF25172 513 - 623 1.2e-12 WDR3 second beta-propeller domain
WD40_CDC20-Fz PF24807 541 - 698 3.6e-19 CDC20/Fizzy WD40 domain
WD40 PF00400 549 - 580 6.8e-07 WD domain, G-beta repeat
Beta-prop_THOC3 PF25174 551 - 787 2.9e-36 THOC3 beta-propeller domain
WD40_WDHD1_1st PF24817 555 - 735 6.9e-24 WDHD1 first WD40 domain
Beta-prop_WDR3_2nd PF25172 588 - 699 1.8e-10 WDR3 second beta-propeller domain
Beta-prop_Aladin PF25460 595 - 709 3.3e-08 Aladin seven-bladed propeller
Beta-prop_WDR36-Utp21_2nd PF25168 609 - 728 3.7e-09 WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_1st PF25173 633 - 787 1.2e-18 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 634 - 786 2.6e-24 WDR5 beta-propeller domain
Beta-prop_EML_2 PF23414 634 - 712 2.9e-08 Echinoderm microtubule-associated protein second beta-propeller
EIF3I PF24805 636 - 729 4.9e-06 EIF3I
WD40_Gbeta PF25391 639 - 786 1e-10 G protein beta WD-40 repeat protein
Beta-prop_EML PF23409 646 - 753 5.2e-06 Echinoderm microtubule-associated protein first beta-propeller
WD40_CDC20-Fz PF24807 646 - 786 1.3e-14 CDC20/Fizzy WD40 domain
Beta-prop_WDR36-Utp21_1st PF25171 647 - 785 1.1e-09 WDR36/Utp21 first beta-propeller
WD40 PF00400 668 - 704 2.4e-07 WD domain, G-beta repeat
Beta-prop_WDR3_2nd PF25172 699 - 787 3.6e-08 WDR3 second beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1445
AccB7I CCANNNNNTGG 1 cut(s) 761
AccIII TCCGGA 1 cut(s) 1642
AciI CCGC 5 cut(s) 345, 848, 1055, 1123, 1456
AclWI GGATC 6 cut(s) 116, 647, 660, 1012, 1319, 1742
AcoI YGGCCR 3 cut(s) 670, 752, 982
AcsI RAATTY 4 cut(s) 451, 573, 678, 1687
AcuI CTGAAG 4 cut(s) 123, 390, 633, 1663
AcyI GRCGYC 1 cut(s) 2078
AdeI CACNNNGTG 1 cut(s) 1267
AfaI GTAC 5 cut(s) 419, 628, 1062, 1920, 2040
AfeI AGCGCT 2 cut(s) 564, 1582
AgsI TTSAA 5 cut(s) 578, 884, 1501, 1692, 1991
AjnI CCWGG 6 cut(s) 142, 672, 694, 721, 781, 1750
AjuI GAANNNNNNNTTGG 2 cut(s) 363, 395
AleI CACNNNNGTG 1 cut(s) 2277
Alw21I GWGCWC 2 cut(s) 1384, 1640
Alw26I GTCTC 2 cut(s) 452, 1419
AlwI GGATC 6 cut(s) 116, 647, 660, 1012, 1319, 1742
AlwNI CAGNNNCTG 2 cut(s) 221, 286
Aor13HI TCCGGA 1 cut(s) 1642
Aor51HI AGCGCT 2 cut(s) 564, 1582
AoxI GGCC 9 cut(s) 489, 670, 752, 793, 982, 1136, 1186, 1286, 2269
ApoI RAATTY 4 cut(s) 451, 573, 678, 1687
ArsI GACNNNNNNTTYG 2 cut(s) 814, 846
Asp700I GAANNNNTTC 1 cut(s) 1771
AspLEI GCGC 4 cut(s) 300, 565, 889, 1583
AsuHPI GGTGA 4 cut(s) 73, 900, 935, 2171
AsuNHI GCTAGC 2 cut(s) 1577, 1907
AvaII GGWCC 6 cut(s) 322, 347, 931, 1014, 1151, 1360
AxyI CCTNAGG 1 cut(s) 798
BalI TGGCCA 3 cut(s) 672, 754, 984
BamHI GGATCC 1 cut(s) 652
BanI GGYRCC 1 cut(s) 1445
BanII GRGCYC 2 cut(s) 1384, 2060
BauI CACGAG 2 cut(s) 2135, 2273
BbsI GAAGAC 2 cut(s) 728, 2097
Bbv12I GWGCWC 2 cut(s) 1384, 1640
BciT130I CCWGG 6 cut(s) 144, 674, 696, 723, 783, 1752
BcoDI GTCTC 2 cut(s) 452, 1419
BfaI CTAG 6 cut(s) 396, 957, 1385, 1578, 1908, 2184
BfoI RGCGCY 2 cut(s) 566, 1584
BglI GCCNNNNNGGC 1 cut(s) 1285
BlpI GCTNAGC 1 cut(s) 2141
Bme1390I CCNGG 6 cut(s) 144, 674, 696, 723, 783, 1752
Bme18I GGWCC 6 cut(s) 322, 347, 931, 1014, 1151, 1360
BmiI GGNNCC 8 cut(s) 323, 324, 654, 933, 1015, 1016, 1447, 2057
BmrFI CCNGG 6 cut(s) 144, 674, 696, 723, 783, 1752
BmsI GCATC 9 cut(s) 21, 127, 285, 469, 765, 774, 1334, 1729, 2139
BmtI GCTAGC 2 cut(s) 1581, 1911
BpiI GAAGAC 2 cut(s) 728, 2097
BpmI CTGGAG 2 cut(s) 165, 744
Bpu10I CCTNAGC 1 cut(s) 876
Bpu1102I GCTNAGC 1 cut(s) 2141
BsaBI GATNNNNATC 1 cut(s) 1809
BsaHI GRCGYC 1 cut(s) 2078
BsaJI CCNNGG 5 cut(s) 532, 673, 695, 721, 2292
BsaWI WCCGGW 1 cut(s) 1642
BsaXI ACNNNNNCTCC 2 cut(s) 2058, 2088
Bse1I ACTGG 7 cut(s) 125, 647, 766, 1058, 1363, 1530, 1704
Bse21I CCTNAGG 1 cut(s) 798
Bse3DI GCAATG 1 cut(s) 189
Bse8I GATNNNNATC 1 cut(s) 1809
BseAI TCCGGA 1 cut(s) 1642
BseBI CCWGG 6 cut(s) 144, 674, 696, 723, 783, 1752
BseDI CCNNGG 5 cut(s) 532, 673, 695, 721, 2292
BseJI GATNNNNATC 1 cut(s) 1809
BseMI GCAATG 1 cut(s) 189
BseMII CTCAG 8 cut(s) 20, 447, 602, 812, 890, 1091, 2105, 2312
BseNI ACTGG 7 cut(s) 125, 647, 766, 1058, 1363, 1530, 1704
BseYI CCCAGC 1 cut(s) 1101
BsgI GTGCAG 2 cut(s) 729, 1770
BshFI GGCC 9 cut(s) 491, 672, 754, 795, 984, 1138, 1188, 1288, 2271
BshNI GGYRCC 1 cut(s) 1445
BsiHKAI GWGCWC 2 cut(s) 1384, 1640
BsiSI CCGG 1 cut(s) 1643
BslFI GGGAC 7 cut(s) 194, 335, 1000, 1183, 1396, 1883, 2037
BsmAI GTCTC 2 cut(s) 452, 1419
BsmBI CGTCTC 1 cut(s) 1419
BsmFI GGGAC 7 cut(s) 194, 335, 1000, 1183, 1396, 1883, 2037
BsmI GAATGC 2 cut(s) 211, 361
BsnI GGCC 9 cut(s) 491, 672, 754, 795, 984, 1138, 1188, 1288, 2271
Bsp1286I GDGCHC 3 cut(s) 1384, 1640, 2060
Bsp13I TCCGGA 1 cut(s) 1642
Bsp1407I TGTACA 1 cut(s) 2038
Bsp143I GATC 8 cut(s) 121, 652, 1004, 1087, 1311, 1747, 2194, 2283
Bsp1720I GCTNAGC 1 cut(s) 2141
BspACI CCGC 5 cut(s) 345, 848, 1055, 1123, 1456
BspANI GGCC 9 cut(s) 491, 672, 754, 795, 984, 1138, 1188, 1288, 2271
BspCNI CTCAG 8 cut(s) 19, 448, 601, 811, 889, 1090, 2106, 2311
BspEI TCCGGA 1 cut(s) 1642
BspHI TCATGA 1 cut(s) 2335
BspLI GGNNCC 8 cut(s) 323, 324, 654, 933, 1015, 1016, 1447, 2057
BspMAI CTGCAG 5 cut(s) 229, 291, 570, 1350, 1957
BspOI GCTAGC 2 cut(s) 1581, 1911
BspPI GGATC 6 cut(s) 116, 647, 660, 1012, 1319, 1742
BspT107I GGYRCC 1 cut(s) 1445
BsrDI GCAATG 1 cut(s) 189
BsrGI TGTACA 1 cut(s) 2038
BsrI ACTGG 7 cut(s) 125, 647, 766, 1058, 1363, 1530, 1704
BssECI CCNNGG 5 cut(s) 532, 673, 695, 721, 2292
BssMI GATC 8 cut(s) 121, 652, 1004, 1087, 1311, 1747, 2194, 2283
BssNI GRCGYC 1 cut(s) 2078
BssSI CACGAG 2 cut(s) 2135, 2273
BssT1I CCWWGG 2 cut(s) 532, 2292
Bst2BI CACGAG 2 cut(s) 2135, 2273
Bst2UI CCWGG 6 cut(s) 144, 674, 696, 723, 783, 1752
Bst4CI ACNGT 6 cut(s) 664, 1183, 1944, 1972, 2150, 2263
Bst6I CTCTTC 2 cut(s) 1150, 1468
BstACI GRCGYC 1 cut(s) 2078
BstAPI GCANNNNNTGC 3 cut(s) 137, 271, 295
BstAUI TGTACA 1 cut(s) 2038
BstC8I GCNNGC 6 cut(s) 1052, 1277, 1579, 1909, 1913, 2269
BstH2I RGCGCY 2 cut(s) 566, 1584
BstHHI GCGC 4 cut(s) 300, 565, 889, 1583
BstKTI GATC 8 cut(s) 124, 655, 1007, 1090, 1314, 1750, 2197, 2286
BstMAI GTCTC 2 cut(s) 452, 1419
BstMBI GATC 8 cut(s) 121, 652, 1004, 1087, 1311, 1747, 2194, 2283
BstNI CCWGG 6 cut(s) 144, 674, 696, 723, 783, 1752
BstNSI RCATGY 4 cut(s) 1054, 1261, 1279, 1655
BstSCI CCNGG 6 cut(s) 142, 672, 694, 721, 781, 1750
BstV2I GAAGAC 2 cut(s) 728, 2097
BstX2I RGATCY 2 cut(s) 652, 1004
BstXI CCANNNNNNTGG 1 cut(s) 1421
BstYI RGATCY 2 cut(s) 652, 1004
Bsu36I CCTNAGG 1 cut(s) 798
BsuRI GGCC 9 cut(s) 491, 672, 754, 795, 984, 1138, 1188, 1288, 2271
BtsIMutI CAGTG 5 cut(s) 597, 654, 1179, 2111, 2155
Cac8I GCNNGC 6 cut(s) 1052, 1277, 1579, 1909, 1913, 2269
CaiI CAGNNNCTG 2 cut(s) 221, 286
CciI TCATGA 1 cut(s) 2335
CfoI GCGC 4 cut(s) 300, 565, 889, 1583
CseI GACGC 4 cut(s) 1947, 2067, 2102, 2313
CsiI ACCWGGT 1 cut(s) 781
Csp6I GTAC 5 cut(s) 418, 627, 1061, 1919, 2039
CviQI GTAC 5 cut(s) 418, 627, 1061, 1919, 2039
DpnI GATC 8 cut(s) 123, 654, 1006, 1089, 1313, 1749, 2196, 2285
DpnII GATC 8 cut(s) 121, 652, 1004, 1087, 1311, 1747, 2194, 2283
DraI TTTAAA 1 cut(s) 744
DraIII CACNNNGTG 1 cut(s) 1267
EaeI YGGCCR 3 cut(s) 670, 752, 982
Eam1104I CTCTTC 2 cut(s) 1150, 1468
EarI CTCTTC 2 cut(s) 1150, 1468
Ecl136II GAGCTC 1 cut(s) 1382
Eco130I CCWWGG 2 cut(s) 532, 2292
Eco24I GRGCYC 2 cut(s) 1384, 2060
Eco47I GGWCC 6 cut(s) 322, 347, 931, 1014, 1151, 1360
Eco47III AGCGCT 2 cut(s) 564, 1582
Eco53kI GAGCTC 1 cut(s) 1382
Eco57I CTGAAG 4 cut(s) 123, 390, 633, 1663
Eco81I CCTNAGG 1 cut(s) 798
EcoICRI GAGCTC 1 cut(s) 1382
EcoO109I RGGNCCY 4 cut(s) 322, 794, 1014, 1136
EcoRI GAATTC 3 cut(s) 451, 678, 1687
EcoRII CCWGG 6 cut(s) 142, 672, 694, 721, 781, 1750
EcoT14I CCWWGG 2 cut(s) 532, 2292
EcoT38I GRGCYC 2 cut(s) 1384, 2060
ErhI CCWWGG 2 cut(s) 532, 2292
Esp3I CGTCTC 1 cut(s) 1419
FaqI GGGAC 7 cut(s) 194, 335, 1000, 1183, 1396, 1883, 2037
FauNDI CATATG 1 cut(s) 1558
FriOI GRGCYC 2 cut(s) 1384, 2060
FspBI CTAG 6 cut(s) 396, 957, 1385, 1578, 1908, 2184
GlaI GCGC 4 cut(s) 299, 564, 888, 1582
GsaI CCCAGC 1 cut(s) 1105
GsuI CTGGAG 2 cut(s) 165, 744
HaeII RGCGCY 2 cut(s) 566, 1584
HaeIII GGCC 9 cut(s) 491, 672, 754, 795, 984, 1138, 1188, 1288, 2271
HapII CCGG 1 cut(s) 1643
HgaI GACGC 4 cut(s) 1947, 2067, 2102, 2313
HhaI GCGC 4 cut(s) 300, 565, 889, 1583
Hin1I GRCGYC 1 cut(s) 2078
Hin6I GCGC 4 cut(s) 298, 563, 887, 1581
HinP1I GCGC 4 cut(s) 298, 563, 887, 1581
HincII GTYRAC 2 cut(s) 1218, 2011
HindII GTYRAC 2 cut(s) 1218, 2011
HindIII AAGCTT 1 cut(s) 1435
HinfI GANTC 2 cut(s) 1210, 1400
HpaII CCGG 1 cut(s) 1643
HphI GGTGA 4 cut(s) 73, 900, 935, 2171
Hpy166II GTNNAC 3 cut(s) 43, 1218, 2011
Hpy188III TCNNGA 8 cut(s) 119, 476, 582, 1385, 1643, 2121, 2192, 2336
Hpy8I GTNNAC 3 cut(s) 43, 1218, 2011
Hpy99I CGWCG 1 cut(s) 2314
HpyCH4III ACNGT 6 cut(s) 664, 1183, 1944, 1972, 2150, 2263
HpyCH4IV ACGT 2 cut(s) 1706, 1921
HpySE526I ACGT 2 cut(s) 1706, 1921
Hsp92I GRCGYC 1 cut(s) 2078
HspAI GCGC 4 cut(s) 298, 563, 887, 1581
KflI GGGWCCC 2 cut(s) 322, 1014
Kpn2I TCCGGA 1 cut(s) 1642
Kzo9I GATC 8 cut(s) 121, 652, 1004, 1087, 1311, 1747, 2194, 2283
LmnI GCTCC 4 cut(s) 262, 1379, 1841, 2055
LweI GCATC 9 cut(s) 21, 127, 285, 469, 765, 774, 1334, 1729, 2139
MabI ACCWGGT 1 cut(s) 781
MaeI CTAG 6 cut(s) 396, 957, 1385, 1578, 1908, 2184
MaeII ACGT 2 cut(s) 1706, 1921
MaeIII GTNAC 4 cut(s) 923, 1253, 1754, 2109
MalI GATC 8 cut(s) 123, 654, 1006, 1089, 1313, 1749, 2196, 2285
MboI GATC 8 cut(s) 121, 652, 1004, 1087, 1311, 1747, 2194, 2283
MfeI CAATTG 1 cut(s) 132
MflI RGATCY 2 cut(s) 652, 1004
MhlI GDGCHC 3 cut(s) 1384, 1640, 2060
MlsI TGGCCA 3 cut(s) 672, 754, 984
MluNI TGGCCA 3 cut(s) 672, 754, 984
MlyI GAGTC 1 cut(s) 1204
MmeI TCCRAC 2 cut(s) 1218, 2033
Mox20I TGGCCA 3 cut(s) 672, 754, 984
MroI TCCGGA 1 cut(s) 1642
MroXI GAANNNNTTC 1 cut(s) 1771
MscI TGGCCA 3 cut(s) 672, 754, 984
MseI TTAA 7 cut(s) 498, 618, 716, 743, 758, 969, 2019
MslI CAYNNNNRTG 2 cut(s) 477, 2277
Msp20I TGGCCA 3 cut(s) 672, 754, 984
MspI CCGG 1 cut(s) 1643
MspR9I CCNGG 6 cut(s) 144, 674, 696, 723, 783, 1752
MunI CAATTG 1 cut(s) 132
Mva1269I GAATGC 2 cut(s) 211, 361
MvaI CCWGG 6 cut(s) 144, 674, 696, 723, 783, 1752
NdeI CATATG 1 cut(s) 1558
NdeII GATC 8 cut(s) 121, 652, 1004, 1087, 1311, 1747, 2194, 2283
NheI GCTAGC 2 cut(s) 1577, 1907
NlaIV GGNNCC 8 cut(s) 323, 324, 654, 933, 1015, 1016, 1447, 2057
NmuCI GTSAC 2 cut(s) 923, 2109
NspI RCATGY 4 cut(s) 1054, 1261, 1279, 1655
OliI CACNNNNGTG 1 cut(s) 2277
PaeI GCATGC 2 cut(s) 1054, 1279
PagI TCATGA 1 cut(s) 2335
PcsI WCGNNNNNNNCGW 1 cut(s) 1884
PctI GAATGC 2 cut(s) 211, 361
PdmI GAANNNNTTC 1 cut(s) 1771
PfeI GAWTC 1 cut(s) 1400
PflFI GACNNNGTC 1 cut(s) 1213
PflMI CCANNNNNTGG 1 cut(s) 761
PleI GAGTC 1 cut(s) 1204
PpsI GAGTC 1 cut(s) 1204
PpuMI RGGWCCY 2 cut(s) 322, 1014
Psp124BI GAGCTC 1 cut(s) 1384
Psp5II RGGWCCY 2 cut(s) 322, 1014
Psp6I CCWGG 6 cut(s) 142, 672, 694, 721, 781, 1750
PspFI CCCAGC 1 cut(s) 1101
PspGI CCWGG 6 cut(s) 142, 672, 694, 721, 781, 1750
PspN4I GGNNCC 8 cut(s) 323, 324, 654, 933, 1015, 1016, 1447, 2057
PspPPI RGGWCCY 2 cut(s) 322, 1014
PstI CTGCAG 5 cut(s) 229, 291, 570, 1350, 1957
PstNI CAGNNNCTG 2 cut(s) 221, 286
PsuI RGATCY 2 cut(s) 652, 1004
PsyI GACNNNGTC 1 cut(s) 1213
RsaI GTAC 5 cut(s) 419, 628, 1062, 1920, 2040
RsaNI GTAC 5 cut(s) 418, 627, 1061, 1919, 2039
RseI CAYNNNNRTG 2 cut(s) 477, 2277
SacI GAGCTC 1 cut(s) 1384
SaqAI TTAA 7 cut(s) 498, 618, 716, 743, 758, 969, 2019
Sau3AI GATC 8 cut(s) 121, 652, 1004, 1087, 1311, 1747, 2194, 2283
SchI GAGTC 1 cut(s) 1204
ScrFI CCNGG 6 cut(s) 144, 674, 696, 723, 783, 1752
SduI GDGCHC 3 cut(s) 1384, 1640, 2060
SexAI ACCWGGT 1 cut(s) 781
SfaNI GCATC 9 cut(s) 21, 127, 285, 469, 765, 774, 1334, 1729, 2139
SinI GGWCC 6 cut(s) 322, 347, 931, 1014, 1151, 1360
SmiMI CAYNNNNRTG 2 cut(s) 477, 2277
SphI GCATGC 2 cut(s) 1054, 1279
SsiI CCGC 5 cut(s) 345, 848, 1055, 1123, 1456
SspMI CTAG 6 cut(s) 396, 957, 1385, 1578, 1908, 2184
SstI GAGCTC 1 cut(s) 1384
StyD4I CCNGG 6 cut(s) 142, 672, 694, 721, 781, 1750
StyI CCWWGG 2 cut(s) 532, 2292
TaaI ACNGT 6 cut(s) 664, 1183, 1944, 1972, 2150, 2263
TaiI ACGT 2 cut(s) 1709, 1924
TaqI TCGA 5 cut(s) 768, 937, 1208, 1716, 2309
TaqII GACCGA 1 cut(s) 1699
TatI WGTACW 2 cut(s) 1060, 2038
TauI GCSGC 2 cut(s) 850, 1057
TfiI GAWTC 1 cut(s) 1400
Tru1I TTAA 7 cut(s) 498, 618, 716, 743, 758, 969, 2019
Tru9I TTAA 7 cut(s) 498, 618, 716, 743, 758, 969, 2019
TscAI CASTG 5 cut(s) 604, 654, 1186, 2118, 2155
TseFI GTSAC 2 cut(s) 923, 2109
Tsp45I GTSAC 2 cut(s) 923, 2109
TspDTI ATGAA 6 cut(s) 65, 178, 368, 446, 464, 1799
TspGWI ACGGA 4 cut(s) 1203, 1443, 2079, 2335
TspRI CASTG 5 cut(s) 604, 654, 1186, 2118, 2155
Tth111I GACNNNGTC 1 cut(s) 1213
Van91I CCANNNNNTGG 1 cut(s) 761
VpaK11BI GGWCC 6 cut(s) 322, 347, 931, 1014, 1151, 1360
XapI RAATTY 4 cut(s) 451, 573, 678, 1687
XbaI TCTAGA 1 cut(s) 1384
XceI RCATGY 4 cut(s) 1054, 1261, 1279, 1655
XmnI GAANNNNTTC 1 cut(s) 1771
XspI CTAG 6 cut(s) 396, 957, 1385, 1578, 1908, 2184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.