Prupe.1G005700_v2.0.a1

transcriptional co-repressor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001113
Physical Location & Seq
Forward (+)
491736 .. 501116
9381 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G005700.1

Sequence Viewer

Length: 2331 bp
ATGGCGCAGAGTAATTGGGAAGCAGATAAGATGCTTGATGTGTACATTTATGATTATTTAGTGAAGAAAGAATTGCATGCTACTGCTAAGTCTTTCATGAATGAAGGGAAGGTTGCACCGGATCCAGTAGCCATTGATGCTCCCGGGGGGTTTCTTTTTGAATGGTGGTCTGTGTTTTGGGACATTTTTATTGCGAGGACAAATGATAAACATTCTGAGGCCGCCGCAGCTTATATAGAGGCACAACAAGGTAAAGCAAAAGAGCAACAACAGCTGCAAATGCAGCAGTTGCAACTAATGCGCCAAGCTCAGATGCAACGAAGGGATCCTAATCATCCTCCCCTTGGTGGTCCATTAAATTCAATAAGCTCTGAAGGAATGCTTGGGCAATCTACTGCTAGTGCACTGGCAGCAAAAATGTATGAGGAACGTGTGAAACACCCCAATCCAATTGACTCAGAGACATCCCAACCACTCCTTGATGCTAGAGTGGCCCTTCTGAAATCAACAAACCATCCTGGTCAGATGGTTCAAGGAAACCCTGGTAGTGTTAATGCGGCATTACAACAAATCCAGGCTCGAAGTCAACAGACCACAGACATAAAGAGTGAAGTTAACATGGGCACTGCTCAGAGATCTTTGCCTACGGATTCTTCAATTTATGGGCAGGGCATGATGCAGTCAAAACCAGGAATGGGGAATGCAGGATTGAACCCAGGAGTTGGTGGTCTTCCGTTGAAGGGTTGGCCTTTAACTGGAATTGACCAGATGCGGCCAGGTTTAGGTGCTCAAGTTCAAAAGCCTTTTCTGCAAGGTGCAACTCAGTTTCAGCTTCTCTCGCAGCAACAACAACAGCTTTTAGCACAGGTTCAGGCACAAGGAAATGTTGGTAGCTCACCTATCTATGGAGATATGAGGGGATTTCCTAGGGGAAATTTAAATGCCAAAGATGGTCAGCCAATCACAAATAATGGATCTATAGGTTCTCCTATGCAGTCAACTTCATCGAAGATAAACATGTCACAGATGCAACACTCTTCTTCTCAACAACAACAGGATCCTTTGCAGCCTCAGCAAGTACAACAGAATAGCCGCAAGAGGAAAGGGCCTTCTTCCTCTGGAGCTGCTAACAGTACTGGTACAGGAAATACAATTGGTCCTTCACCCAACTCTCAACCATCAACGCCATCCACCCATACCCCTGGAGACGGAGTTTCTATGGCTGGTAATTTGCCAAATGCCAGTAACATTCCGAAAAGTATTATGATGTATGGTGCAGATGGAACTGGTGGCCTTGCATCGTCCACAAACCAGCTGGATGACATTGAACAATTTGGAGATGTTGGCTCCTTAGAAGATAATGTGGAATCCTTTTTATCACATGATGATGGAGATGGAAGGGATCTTTTTGGCACATTGAAACGGAACCCTGCACATTCTGCAGAAGCTTCAAAGGGTTTTTCCTTCAGTGAAGTTGGTTCAATACGTAAAAGTAGTAGCAAAGTTGTCTGTTGTCATTTCTCTTCAGAGGGAAAACTGTTGGCCAGTGCTGGGCATGACAAGAAGGTTGTTGTCTGGAATATGGAAACACTGCAAACTGAAAGCACATCAGAGGAGCACTCCTTGATAATTACTGATGTTCGATTTAGACCAAATTCAACTCAGTTGGCAACTTCTTCATTTGACACAACTGTGCGACTTTGGGATGCTGCTGACCCAAACTATTCTTTACAGACATATGCAGGGCATACCTCGCATGTAATGTCACTTGATTTCCATCCTAAGAAGAATGACCTTTTCTGCTCCTGTGATGCTAACAATGAGATTCGCTTTTGGAATATCAATCAGTATTCTTGCACTCGCGTTTCTAAGGGAGGCTCAGCACAGGTGAGATTCCAGCCAAGAATTGGACAGTTTCTTGCTGCTGCATCTGGAAATGTTGTGTCTATATTTGATGCTGAGAGTGACAGGCAGACACATTCATTGCAGGGTCACACCACAGAGGTACACTCTCTTTGCTGGGATACAAATGGAGATTATTTGGCATCTGTCAGTCAAGAGTCTGTCAGGGTGTGGTCATTATCCTCTGGAGAGTGCATTCATGAACTCAGTCCCAGTGGAAACATGTTCCAGTCTTGTGTTTTCCATCCAAGCTACTCCACTCTCTTGGTCATTGGAGGCTACCAGTCATTGGAGCTCTGGAACATGGCTGAGAATAAGTGTATGACCATTCAAGCTCATGAGGGTGTAATATCAGCTTTAGCACAGTCACCAGTCACAGGAATGGTCGCCTCTACTAGTCACGACAAATCTGTTAAAATATGGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0001558 GO:0001666 GO:0003002 GO:0003006 GO:0005975 GO:0005976 GO:0006355 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009798 GO:0009845 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009943 GO:0009944 GO:0009955 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010073 GO:0010154 GO:0010191 GO:0010214 GO:0010243 GO:0010272 GO:0010393 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0022604 GO:0030307 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032504 GO:0033554 GO:0036293 GO:0040008 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0044237 GO:0044238 GO:0045892 GO:0045927 GO:0045934 GO:0045995 GO:0046677 GO:0046898 GO:0048316 GO:0048359 GO:0048507 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048608 GO:0048609 GO:0048638 GO:0048639 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051510 GO:0051512 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060992 GO:0061458 GO:0065001 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0071704 GO:0080001 GO:0080090 GO:0090351 GO:0097305 GO:1901654 GO:1901698 GO:1901700 GO:1902074 GO:1902183 GO:1902679 GO:1903506 GO:1903507 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LisH WD40

Protein Analysis

777

Amino Acids

84.0

Weight (kDa)

6.06

Isoelectric Point (pI)

44.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 722, 1907, 2191
AccII CGCG 1 cut(s) 1863
AciI CCGC 5 cut(s) 222, 225, 557, 772, 1093
AclWI GGATC 8 cut(s) 116, 129, 320, 333, 982, 1052, 1065, 1410
AcoI YGGCCR 2 cut(s) 773, 1542
AcsI RAATTY 3 cut(s) 358, 934, 1654
AcuI CTGAAG 3 cut(s) 393, 1450, 1509
AfaI GTAC 5 cut(s) 44, 1080, 1135, 1141, 2007
AflIII ACRYGT 3 cut(s) 430, 1017, 2124
AhlI ACTAGT 1 cut(s) 2297
AjnI CCWGG 7 cut(s) 517, 541, 573, 688, 715, 775, 1201
AjuI GAANNNNNNNTTGG 2 cut(s) 366, 398
AleI CACNNNNGTG 1 cut(s) 1691
Alw21I GWGCWC 4 cut(s) 406, 790, 1620, 2199
Alw26I GTCTC 2 cut(s) 455, 1200
Alw44I GTGCAC 1 cut(s) 402
AlwI GGATC 8 cut(s) 116, 129, 320, 333, 982, 1052, 1065, 1410
Ama87I CYCGRG 1 cut(s) 143
AoxI GGCC 7 cut(s) 219, 492, 746, 773, 1106, 1291, 1542
ApaLI GTGCAC 1 cut(s) 402
ApoI RAATTY 3 cut(s) 358, 934, 1654
AspA2I CCTAGG 1 cut(s) 926
AspLEI GCGC 2 cut(s) 7, 303
AspS9I GGNCC 4 cut(s) 350, 493, 1106, 1157
AsuC2I CCSGG 2 cut(s) 144, 145
AsuHPI GGTGA 4 cut(s) 888, 1155, 1900, 2262
AvaI CYCGRG 1 cut(s) 143
AvaII GGWCC 2 cut(s) 350, 1157
AvrII CCTAGG 1 cut(s) 926
BaeGI GKGCMC 2 cut(s) 406, 626
BalI TGGCCA 1 cut(s) 1544
BamHI GGATCC 3 cut(s) 121, 325, 1057
BanII GRGCYC 1 cut(s) 2199
BbsI GAAGAC 1 cut(s) 722
Bbv12I GWGCWC 4 cut(s) 406, 790, 1620, 2199
BbvCI CCTCAGC 1 cut(s) 1071
BciT130I CCWGG 7 cut(s) 519, 543, 575, 690, 717, 777, 1203
BciVI GTATCC 1 cut(s) 2017
BcnI CCSGG 2 cut(s) 144, 145
BcoDI GTCTC 2 cut(s) 455, 1200
BcuI ACTAGT 1 cut(s) 2297
BfaI CTAG 4 cut(s) 399, 486, 927, 2298
BfmI CTRYAG 2 cut(s) 978, 1440
BfuI GTATCC 1 cut(s) 2017
BglII AGATCT 1 cut(s) 635
BlnI CCTAGG 1 cut(s) 926
BlpI GCTNAGC 1 cut(s) 1879
BmcAI AGTACT 1 cut(s) 1135
Bme1390I CCNGG 9 cut(s) 144, 145, 519, 543, 575, 690, 717, 777, 1203
Bme18I GGWCC 2 cut(s) 350, 1157
BmeT110I CYCGRG 1 cut(s) 143
BmgT120I GGNCC 4 cut(s) 350, 493, 1106, 1157
BmiI GGNNCC 5 cut(s) 123, 327, 1059, 1348, 1427
BmrFI CCNGG 9 cut(s) 144, 145, 519, 543, 575, 690, 717, 777, 1203
BmrI ACTGGG 1 cut(s) 2109
BmuI ACTGGG 1 cut(s) 2109
BpiI GAAGAC 1 cut(s) 722
BplI GAGNNNNNCTC 4 cut(s) 1604, 1636, 1994, 2026
BpmI CTGGAG 3 cut(s) 1140, 1224, 2109
Bpu10I CCTNAGC 1 cut(s) 1071
Bpu1102I GCTNAGC 1 cut(s) 1879
BpuEI CTTGAG 1 cut(s) 774
BpuMI CCSGG 2 cut(s) 144, 145
BsaAI YACGTR 1 cut(s) 1487
BsaBI GATNNNNATC 2 cut(s) 330, 1776
BsaJI CCNNGG 7 cut(s) 143, 144, 343, 541, 715, 926, 1201
BsaWI WCCGGW 1 cut(s) 118
BsaXI ACNNNNNCTCC 2 cut(s) 1197, 1227
Bse3DI GCAATG 1 cut(s) 1982
Bse8I GATNNNNATC 2 cut(s) 330, 1776
BseBI CCWGG 7 cut(s) 519, 543, 575, 690, 717, 777, 1203
BseDI CCNNGG 7 cut(s) 143, 144, 343, 541, 715, 926, 1201
BseGI GGATG 8 cut(s) 334, 464, 514, 1187, 1324, 1711, 1777, 2146
BseJI GATNNNNATC 2 cut(s) 330, 1776
BseMI GCAATG 1 cut(s) 1982
BseRI GAGGAG 1 cut(s) 1628
BseSI GKGCMC 2 cut(s) 406, 626
BseYI CCCAGC 2 cut(s) 1550, 2019
BsgI GTGCAG 2 cut(s) 1296, 1416
Bsh1236I CGCG 1 cut(s) 1863
BshFI GGCC 7 cut(s) 221, 494, 748, 775, 1108, 1293, 1544
BsiHKAI GWGCWC 4 cut(s) 406, 790, 1620, 2199
BsiHKCI CYCGRG 1 cut(s) 143
BsiSI CCGG 2 cut(s) 119, 144
BslFI GGGAC 2 cut(s) 194, 2097
BsmAI GTCTC 2 cut(s) 455, 1200
BsmBI CGTCTC 1 cut(s) 1200
BsmFI GGGAC 2 cut(s) 194, 2097
BsmI GAATGC 3 cut(s) 384, 706, 2097
BsnI GGCC 7 cut(s) 221, 494, 748, 775, 1108, 1293, 1544
BsoBI CYCGRG 1 cut(s) 143
Bsp1286I GDGCHC 5 cut(s) 406, 626, 790, 1620, 2199
Bsp1407I TGTACA 1 cut(s) 42
Bsp143I GATC 6 cut(s) 121, 325, 635, 974, 1057, 1402
Bsp1720I GCTNAGC 1 cut(s) 1879
BspACI CCGC 5 cut(s) 222, 225, 557, 772, 1093
BspANI GGCC 7 cut(s) 221, 494, 748, 775, 1108, 1293, 1544
BspFNI CGCG 1 cut(s) 1863
BspHI TCATGA 3 cut(s) 96, 2101, 2239
BspLI GGNNCC 5 cut(s) 123, 327, 1059, 1348, 1427
BspMAI CTGCAG 1 cut(s) 1444
BspPI GGATC 8 cut(s) 116, 129, 320, 333, 982, 1052, 1065, 1410
BsrDI GCAATG 1 cut(s) 1982
BsrGI TGTACA 1 cut(s) 42
BssECI CCNNGG 7 cut(s) 143, 144, 343, 541, 715, 926, 1201
BssMI GATC 6 cut(s) 121, 325, 635, 974, 1057, 1402
BssT1I CCWWGG 2 cut(s) 343, 926
Bst2UI CCWGG 7 cut(s) 519, 543, 575, 690, 717, 777, 1203
Bst4CI ACNGT 5 cut(s) 1133, 1539, 1693, 1914, 2268
Bst6I CTCTTC 2 cut(s) 1042, 1528
BstAPI GCANNNNNTGC 3 cut(s) 289, 298, 1439
BstAUI TGTACA 1 cut(s) 42
BstBAI YACGTR 1 cut(s) 1487
BstC8I GCNNGC 1 cut(s) 78
BstF5I GGATG 8 cut(s) 334, 464, 514, 1187, 1324, 1711, 1777, 2146
BstFNI CGCG 1 cut(s) 1863
BstHHI GCGC 2 cut(s) 7, 303
BstKTI GATC 6 cut(s) 124, 328, 638, 977, 1060, 1405
BstMAI GTCTC 2 cut(s) 455, 1200
BstMBI GATC 6 cut(s) 121, 325, 635, 974, 1057, 1402
BstNI CCWGG 7 cut(s) 519, 543, 575, 690, 717, 777, 1203
BstNSI RCATGY 4 cut(s) 80, 1021, 1760, 2128
BstSCI CCNGG 9 cut(s) 142, 143, 517, 541, 573, 688, 715, 775, 1201
BstSFI CTRYAG 2 cut(s) 978, 1440
BstSLI GKGCMC 2 cut(s) 406, 626
BstSNI TACGTA 1 cut(s) 1487
BstUI CGCG 1 cut(s) 1863
BstV2I GAAGAC 1 cut(s) 722
BstX2I RGATCY 6 cut(s) 121, 325, 635, 974, 1057, 1402
BstXI CCANNNNNNTGG 2 cut(s) 1202, 2167
BstYI RGATCY 6 cut(s) 121, 325, 635, 974, 1057, 1402
BsuI GTATCC 1 cut(s) 2017
BsuRI GGCC 7 cut(s) 221, 494, 748, 775, 1108, 1293, 1544
BtsCI GGATG 8 cut(s) 334, 464, 514, 1187, 1324, 1711, 1777, 2146
BtsI GCAGTG 2 cut(s) 624, 1589
BtsIMutI CAGTG 6 cut(s) 404, 624, 1474, 1552, 1589, 2122
Cac8I GCNNGC 1 cut(s) 78
CciI TCATGA 3 cut(s) 96, 2101, 2239
CfoI GCGC 2 cut(s) 7, 303
Cfr13I GGNCC 4 cut(s) 350, 493, 1106, 1157
Cfr9I CCCGGG 1 cut(s) 143
Csp6I GTAC 5 cut(s) 43, 1079, 1134, 1140, 2006
CviQI GTAC 5 cut(s) 43, 1079, 1134, 1140, 2006
DpnI GATC 6 cut(s) 123, 327, 637, 976, 1059, 1404
DpnII GATC 6 cut(s) 121, 325, 635, 974, 1057, 1402
DraI TTTAAA 1 cut(s) 939
EaeI YGGCCR 2 cut(s) 773, 1542
Eam1104I CTCTTC 2 cut(s) 1042, 1528
EarI CTCTTC 2 cut(s) 1042, 1528
Ecl136II GAGCTC 1 cut(s) 2197
Eco105I TACGTA 1 cut(s) 1487
Eco130I CCWWGG 2 cut(s) 343, 926
Eco24I GRGCYC 1 cut(s) 2199
Eco47I GGWCC 2 cut(s) 350, 1157
Eco53kI GAGCTC 1 cut(s) 2197
Eco57I CTGAAG 3 cut(s) 393, 1450, 1509
Eco88I CYCGRG 1 cut(s) 143
EcoICRI GAGCTC 1 cut(s) 2197
EcoO109I RGGNCCY 1 cut(s) 1106
EcoRII CCWGG 7 cut(s) 517, 541, 573, 688, 715, 775, 1201
EcoT14I CCWWGG 2 cut(s) 343, 926
EcoT38I GRGCYC 1 cut(s) 2199
ErhI CCWWGG 2 cut(s) 343, 926
Esp3I CGTCTC 1 cut(s) 1200
FalI AAGNNNNNCTT 2 cut(s) 366, 398
FaqI GGGAC 2 cut(s) 194, 2097
FauNDI CATATG 1 cut(s) 1738
FokI GGATG 8 cut(s) 321, 451, 501, 1174, 1331, 1718, 1764, 2133
FriOI GRGCYC 1 cut(s) 2199
FspBI CTAG 4 cut(s) 399, 486, 927, 2298
GlaI GCGC 2 cut(s) 6, 302
GsaI CCCAGC 2 cut(s) 1554, 2023
GsuI CTGGAG 3 cut(s) 1140, 1224, 2109
HaeIII GGCC 7 cut(s) 221, 494, 748, 775, 1108, 1293, 1544
HapII CCGG 2 cut(s) 119, 144
HhaI GCGC 2 cut(s) 7, 303
Hin6I GCGC 2 cut(s) 5, 301
HinP1I GCGC 2 cut(s) 5, 301
HincII GTYRAC 3 cut(s) 587, 616, 999
HindII GTYRAC 3 cut(s) 587, 616, 999
HindIII AAGCTT 1 cut(s) 1446
HinfI GANTC 6 cut(s) 455, 650, 1367, 1825, 1893, 2060
HpaI GTTAAC 1 cut(s) 616
HpaII CCGG 2 cut(s) 119, 144
HphI GGTGA 4 cut(s) 888, 1155, 1900, 2262
Hpy166II GTNNAC 7 cut(s) 43, 404, 587, 616, 999, 1305, 2008
Hpy8I GTNNAC 7 cut(s) 43, 404, 587, 616, 999, 1305, 2008
HpyCH4III ACNGT 5 cut(s) 1133, 1539, 1693, 1914, 2268
HpyCH4IV ACGT 2 cut(s) 430, 1486
HpySE526I ACGT 2 cut(s) 430, 1486
HspAI GCGC 2 cut(s) 5, 301
KspAI GTTAAC 1 cut(s) 616
Kzo9I GATC 6 cut(s) 121, 325, 635, 974, 1057, 1402
LmnI GCTCC 6 cut(s) 145, 1121, 1352, 1615, 1808, 2194
MaeI CTAG 4 cut(s) 399, 486, 927, 2298
MaeII ACGT 2 cut(s) 430, 1486
MaeIII GTNAC 8 cut(s) 1020, 1244, 1764, 1964, 1991, 2268, 2275, 2300
MalI GATC 6 cut(s) 123, 327, 637, 976, 1059, 1404
MboI GATC 6 cut(s) 121, 325, 635, 974, 1057, 1402
MfeI CAATTG 2 cut(s) 450, 1152
MflI RGATCY 6 cut(s) 121, 325, 635, 974, 1057, 1402
MhlI GDGCHC 5 cut(s) 406, 626, 790, 1620, 2199
MlsI TGGCCA 1 cut(s) 1544
MluNI TGGCCA 1 cut(s) 1544
MlyI GAGTC 2 cut(s) 449, 2069
Mox20I TGGCCA 1 cut(s) 1544
MscI TGGCCA 1 cut(s) 1544
MseI TTAA 6 cut(s) 356, 552, 615, 752, 938, 2316
MslI CAYNNNNRTG 4 cut(s) 1386, 1691, 2244, 2282
Msp20I TGGCCA 1 cut(s) 1544
MspA1I CMGCKG 2 cut(s) 274, 1315
MspI CCGG 2 cut(s) 119, 144
MspR9I CCNGG 9 cut(s) 144, 145, 519, 543, 575, 690, 717, 777, 1203
MunI CAATTG 2 cut(s) 450, 1152
Mva1269I GAATGC 3 cut(s) 384, 706, 2097
MvaI CCWGG 7 cut(s) 519, 543, 575, 690, 717, 777, 1203
MvnI CGCG 1 cut(s) 1863
NciI CCSGG 2 cut(s) 144, 145
NdeI CATATG 1 cut(s) 1738
NdeII GATC 6 cut(s) 121, 325, 635, 974, 1057, 1402
NlaIV GGNNCC 5 cut(s) 123, 327, 1059, 1348, 1427
NmuCI GTSAC 7 cut(s) 1020, 1764, 1964, 1991, 2268, 2275, 2300
NspI RCATGY 4 cut(s) 80, 1021, 1760, 2128
OliI CACNNNNGTG 1 cut(s) 1691
PaeI GCATGC 1 cut(s) 80
PagI TCATGA 3 cut(s) 96, 2101, 2239
PciI ACATGT 2 cut(s) 1017, 2124
PctI GAATGC 3 cut(s) 384, 706, 2097
PfeI GAWTC 4 cut(s) 650, 1367, 1825, 1893
PflMI CCANNNNNTGG 3 cut(s) 722, 1907, 2191
PleI GAGTC 2 cut(s) 449, 2068
PpsI GAGTC 2 cut(s) 449, 2068
Ppu21I YACGTR 1 cut(s) 1487
PscI ACATGT 2 cut(s) 1017, 2124
Psp124BI GAGCTC 1 cut(s) 2199
Psp6I CCWGG 7 cut(s) 517, 541, 573, 688, 715, 775, 1201
PspFI CCCAGC 2 cut(s) 1550, 2019
PspGI CCWGG 7 cut(s) 517, 541, 573, 688, 715, 775, 1201
PspN4I GGNNCC 5 cut(s) 123, 327, 1059, 1348, 1427
PspPI GGNCC 4 cut(s) 350, 493, 1106, 1157
PstI CTGCAG 1 cut(s) 1444
PsuI RGATCY 6 cut(s) 121, 325, 635, 974, 1057, 1402
PvuII CAGCTG 2 cut(s) 274, 1315
RsaI GTAC 5 cut(s) 44, 1080, 1135, 1141, 2007
RsaNI GTAC 5 cut(s) 43, 1079, 1134, 1140, 2006
RseI CAYNNNNRTG 4 cut(s) 1386, 1691, 2244, 2282
SacI GAGCTC 1 cut(s) 2199
SaqAI TTAA 6 cut(s) 356, 552, 615, 752, 938, 2316
Sau3AI GATC 6 cut(s) 121, 325, 635, 974, 1057, 1402
Sau96I GGNCC 4 cut(s) 350, 493, 1106, 1157
ScaI AGTACT 1 cut(s) 1135
SchI GAGTC 2 cut(s) 449, 2069
ScrFI CCNGG 9 cut(s) 144, 145, 519, 543, 575, 690, 717, 777, 1203
SduI GDGCHC 5 cut(s) 406, 626, 790, 1620, 2199
SfcI CTRYAG 2 cut(s) 978, 1440
SinI GGWCC 2 cut(s) 350, 1157
SmaI CCCGGG 1 cut(s) 145
SmiI ATTTAAAT 1 cut(s) 939
SmiMI CAYNNNNRTG 4 cut(s) 1386, 1691, 2244, 2282
SmlI CTYRAG 1 cut(s) 789
SmoI CTYRAG 1 cut(s) 789
SnaBI TACGTA 1 cut(s) 1487
SpeI ACTAGT 1 cut(s) 2297
SphI GCATGC 1 cut(s) 80
SsiI CCGC 5 cut(s) 222, 225, 557, 772, 1093
SspMI CTAG 4 cut(s) 399, 486, 927, 2298
SstI GAGCTC 1 cut(s) 2199
StyD4I CCNGG 9 cut(s) 142, 143, 517, 541, 573, 688, 715, 775, 1201
StyI CCWWGG 2 cut(s) 343, 926
SwaI ATTTAAAT 1 cut(s) 939
TaaI ACNGT 5 cut(s) 1133, 1539, 1693, 1914, 2268
TaiI ACGT 2 cut(s) 433, 1489
TaqI TCGA 3 cut(s) 580, 1007, 1642
TatI WGTACW 3 cut(s) 42, 1078, 1133
TauI GCSGC 5 cut(s) 224, 227, 560, 775, 1095
TfiI GAWTC 4 cut(s) 650, 1367, 1825, 1893
Tru1I TTAA 6 cut(s) 356, 552, 615, 752, 938, 2316
Tru9I TTAA 6 cut(s) 356, 552, 615, 752, 938, 2316
TscAI CASTG 6 cut(s) 411, 631, 1474, 1552, 1596, 2122
TseFI GTSAC 7 cut(s) 1020, 1764, 1964, 1991, 2268, 2275, 2300
Tsp45I GTSAC 7 cut(s) 1020, 1764, 1964, 1991, 2268, 2275, 2300
TspDTI ATGAA 8 cut(s) 85, 113, 117, 993, 1668, 1971, 2090, 2118
TspGWI ACGGA 4 cut(s) 662, 723, 1224, 1438
TspMI CCCGGG 1 cut(s) 143
TspRI CASTG 6 cut(s) 411, 631, 1474, 1552, 1596, 2122
Van91I CCANNNNNTGG 3 cut(s) 722, 1907, 2191
VneI GTGCAC 1 cut(s) 402
VpaK11BI GGWCC 2 cut(s) 350, 1157
XapI RAATTY 3 cut(s) 358, 934, 1654
XceI RCATGY 4 cut(s) 80, 1021, 1760, 2128
XcmI CCANNNNNNNNNTGG 2 cut(s) 1312, 1904
XmaI CCCGGG 1 cut(s) 143
XmaJI CCTAGG 1 cut(s) 926
XspI CTAG 4 cut(s) 399, 486, 927, 2298
ZrmI AGTACT 1 cut(s) 1135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.