pycom04g00520

transcriptional co-repressor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0001113
Physical Location & Seq
Forward (+)
484187 .. 491651
7465 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g00520.5

Sequence Viewer

Length: 2331 bp
ATGGCGCAGAGTAGTTGGGAAGCAGATAAGATGCTTGATGTATACATATATGATTATTTAGTGAAGAAAGAATTACATGTCACTGCTAAGTCTTTCATGACCGAAGGGAAGGTTGCACCCGATCCAGTAGCCATTGATGCTCCCGGGGGCTTTCTTTTTGAATGGTGGTCTGTCTTTTGGGATATTTTTATTGCAAGGACAAACGATAAACATTCTGAGGCTGCTGCAGCATATATAGAGGCACAACAAAGTAAAGCAAAAGAGCAGCAACAGCTGCAAATGCAGCAGTTGCACCTAATGCGCCAAGCTCAGATGCAACGGAGAGATCCTAATCATCCTCCCCTTGGTGGTCCACTAAATTCAATTAGTTCTGAAGGGATGCTTGGGCAATCTACTGCTAGTGCACTGGCAGCAAAAATGTACGAGGACCGCTTGAAACACCCCAATCCAATTGAGTCAGAGACATCCCAACCACTCCTTGATGCCAGAGTTGCCCTTCTAAAATCAACGAACCATCCTGGTCAGATGGTTCAAGGAAACCCTGGAAGTGTTAATGCAGCATTACAACAAATCCAGGCTCGAAGTCAACAGGCCACAGACATAAAGAGGGAAGTTAATATGGGCACTGCTCAGAGATCTATGCCTATGGATTCTTCAATTTATGGGCAGGGAATGGTTCAGTCAAAACCTGGATTAGGAAATGCAGGATTGAACCCAGGAGTTGGTGGTCTTCCATTGAAGGGGTGGCCTTTAACTGGAATTGACCAAATGAGGCCCGGTTTAGGTGGACAAGTTCAAAAGCCTTTCCTGCAAGGTGCAACTCAGTTTCAGGTTCTCTCACCGCAACAACAACAGCTTTTGGCACAGGCTCAGGGACAAGGAAATGGTGCTAGCTCATCAATTTATGGAGATATGAGGGGATTTTCTAGGGGAAATTTAAATACAAAAGATACCCAACAAATGACAAATAATGGCTCCATGAGTTCTCCTATGCAGTCAAATTCATCAAAGATGAACATGTCACAGATGCAACACTCTTCATCTCAACAACAGGATCCTTTGCAGTCTCAGCAAGTACAGCAGAATAACCGCAAAAGGAAAGGACCTTCATCCTCAGGACAGCCTGCTAACAGTACCGGTACAGGAAATACAATTGGTCCTTCGCCCAATTCTCAACCATCAACTCCATCCACCCATACCCCTGGAGACGGAGTTGCTATGACTGCTAATTTGCCAAATTCGAGCAGTGTTCCAAAAAGTATGATGATGTACGGTGCAGCTGGAACAGGTGGCCTTGCATCATCCACAAACCAGTTGGAAGACATTGAACAATTTGGGGATGTTGGCTCTTTAGAAGATAATGTGGAATCATTCTTGTCACATGATGATGGAGATGGAAGGGATTTATTTGGCACATTGAAACGGAACCCTGCACATTCTGCAGAAGCTTCAAAGGGTTTTTCCTTCAGTGAAGTTGGTTCAATACGTAAAAGTAAAACCAAAGTTGTCTGTTGCCACTTCTCTTCAGATGGAAAATTGCTGGCCAGTGCTGGCCATGACAAGAAGGTTGTTGTTTGGAATATGGAAACTCTACAAACTGAAATCACACCGGAGGAGCATGGCCTGATAATTACAGATGTTCGATTTAGACCAAATTCATCTCAGTTGGCAACTTCTTCATTTGACACAACTGTGCGACTTTGGGATGCTGCTGAACCAAACTATAGTTTACAGACATATGCTGGGCATACCTCACATGTATTGTCACTTGATTTCCACCCTAAGAAGAATGACCTTTTCTGCTCTTGTGATGCCAACAATGAGATTCGCTTTTGGAATATTAATGAGTATTCTTGCACTCGCGTTTCTAAGGGAGGTTCAGCACAGGTGAGATTCCAACCGAGAATTGGACAGTTGCTGGCTGCAGCATCCGGGAATGTTGTATCTATATTTGATGCTGAGACTGACAGGCAGACACATTCATTGCAGGGCCACTCCACGGAGGTACACTCTCTTTGCTGGGATACAAATGGAGAGATTTTAGCATCTGCCAGTCAAGAGTCTGTCAGAGTGTGGTCATTATCCTCTGGAGAGTGCATTCATGAGCTCAGTTCTAGTGCAAACATGTTCCATTCTATTGTATTCCATCCAAGCTACTCGACTCTCTTGGTTATTGGAGGATACCAGTCATTGGAGCTCTGGAACATGTCTGAGAACAAGTGTATGACAATTCAGGCACATGAGTGTGTAATATCAGCTTTGGCACAGTCACCGGTTACAGGAATGGTCGCCTCTGCCAGTCACGACAAGGCCGTTAAAATCTGGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0001558 GO:0001666 GO:0003002 GO:0003006 GO:0005975 GO:0005976 GO:0006355 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009798 GO:0009845 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009943 GO:0009944 GO:0009955 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010073 GO:0010154 GO:0010191 GO:0010214 GO:0010243 GO:0010272 GO:0010393 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0022604 GO:0030307 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032504 GO:0033554 GO:0036293 GO:0040008 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0044237 GO:0044238 GO:0045892 GO:0045927 GO:0045934 GO:0045995 GO:0046677 GO:0046898 GO:0048316 GO:0048359 GO:0048507 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048608 GO:0048609 GO:0048638 GO:0048639 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051510 GO:0051512 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060992 GO:0061458 GO:0065001 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0071704 GO:0080001 GO:0080090 GO:0090351 GO:0097305 GO:1901654 GO:1901698 GO:1901700 GO:1902074 GO:1902183 GO:1902679 GO:1903506 GO:1903507 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LisH WD40

Protein Analysis

777

Amino Acids

84.13

Weight (kDa)

6.25

Isoelectric Point (pI)

48.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 722, 2191
AccI GTMKAC 1 cut(s) 42
AccII CGCG 1 cut(s) 1863
AciI CCGC 3 cut(s) 430, 842, 1090
AclWI GGATC 4 cut(s) 116, 320, 1049, 1062
AcoI YGGCCR 2 cut(s) 1542, 1552
AcsI RAATTY 5 cut(s) 358, 934, 1000, 1237, 1654
AcuI CTGAAG 3 cut(s) 393, 1450, 1509
AfaI GTAC 6 cut(s) 422, 1077, 1135, 1141, 1271, 2007
AflIII ACRYGT 5 cut(s) 76, 1017, 1756, 2124, 2205
AgeI ACCGGT 2 cut(s) 1136, 2272
AjnI CCWGG 6 cut(s) 517, 541, 573, 688, 715, 1201
AjuI GAANNNNNNNTTGG 2 cut(s) 366, 398
AleI CACNNNNGTG 2 cut(s) 1691, 2242
Alw21I GWGCWC 3 cut(s) 406, 2109, 2199
Alw26I GTCTC 4 cut(s) 455, 1071, 1200, 1955
Alw44I GTGCAC 1 cut(s) 402
AlwI GGATC 4 cut(s) 116, 320, 1049, 1062
AlwNI CAGNNNCTG 1 cut(s) 1918
Ama87I CYCGRG 1 cut(s) 143
AoxI GGCC 9 cut(s) 591, 746, 773, 1291, 1542, 1552, 1621, 1990, 2310
ApaLI GTGCAC 1 cut(s) 402
ApoI RAATTY 5 cut(s) 358, 934, 1000, 1237, 1654
ArsI GACNNNNNNTTYG 2 cut(s) 1213, 1245
AseI ATTAAT 1 cut(s) 1842
AsiGI ACCGGT 2 cut(s) 1136, 2272
AspLEI GCGC 2 cut(s) 7, 303
AspS9I GGNCC 6 cut(s) 350, 427, 774, 1103, 1157, 1990
AsuC2I CCSGG 4 cut(s) 144, 145, 777, 1933
AsuHPI GGTGA 3 cut(s) 831, 1900, 2262
AsuNHI GCTAGC 1 cut(s) 890
AvaI CYCGRG 1 cut(s) 143
AvaII GGWCC 4 cut(s) 350, 427, 1103, 1157
AxyI CCTNAGG 1 cut(s) 1114
BaeGI GKGCMC 2 cut(s) 406, 626
BalI TGGCCA 2 cut(s) 1544, 1554
BamHI GGATCC 1 cut(s) 1054
BanII GRGCYC 2 cut(s) 2109, 2199
BbsI GAAGAC 2 cut(s) 722, 1326
Bbv12I GWGCWC 3 cut(s) 406, 2109, 2199
BccI CCATC 8 cut(s) 520, 522, 1186, 1195, 1382, 1388, 1523, 2154
BceAI ACGGC 1 cut(s) 2297
BciT130I CCWGG 6 cut(s) 519, 543, 575, 690, 717, 1203
BciVI GTATCC 2 cut(s) 2017, 2174
BcnI CCSGG 4 cut(s) 144, 145, 777, 1933
BcoDI GTCTC 4 cut(s) 455, 1071, 1200, 1955
BfaI CTAG 4 cut(s) 399, 891, 927, 2115
BfmI CTRYAG 4 cut(s) 225, 1440, 1723, 1923
BfuI GTATCC 2 cut(s) 2017, 2174
BglII AGATCT 1 cut(s) 635
Bme18I GGWCC 4 cut(s) 350, 427, 1103, 1157
BmeT110I CYCGRG 1 cut(s) 143
BmgT120I GGNCC 6 cut(s) 350, 427, 774, 1103, 1157, 1990
BmiI GGNNCC 3 cut(s) 976, 1056, 1427
BmtI GCTAGC 1 cut(s) 894
BpiI GAAGAC 2 cut(s) 722, 1326
BplI GAGNNNNNCTC 2 cut(s) 1994, 2026
BpmI CTGGAG 2 cut(s) 1224, 2109
Bpu10I CCTNAGC 1 cut(s) 870
BpuMI CCSGG 4 cut(s) 144, 145, 777, 1933
BsaAI YACGTR 1 cut(s) 1487
BsaBI GATNNNNATC 1 cut(s) 330
BsaJI CCNNGG 7 cut(s) 143, 144, 343, 541, 715, 1201, 1998
BsaWI WCCGGW 3 cut(s) 1136, 1609, 2272
BsaXI ACNNNNNCTCC 2 cut(s) 1197, 1227
Bse118I RCCGGY 2 cut(s) 1136, 2272
Bse1I ACTGG 8 cut(s) 125, 411, 760, 1312, 1545, 2052, 2185, 2298
Bse21I CCTNAGG 1 cut(s) 1114
Bse3DI GCAATG 1 cut(s) 1982
Bse8I GATNNNNATC 1 cut(s) 330
BseBI CCWGG 6 cut(s) 519, 543, 575, 690, 717, 1203
BseDI CCNNGG 7 cut(s) 143, 144, 343, 541, 715, 1201, 1998
BseJI GATNNNNATC 1 cut(s) 330
BseMI GCAATG 1 cut(s) 1982
BseNI ACTGG 8 cut(s) 125, 411, 760, 1312, 1545, 2052, 2185, 2298
BseRI GAGGAG 1 cut(s) 1628
BseSI GKGCMC 2 cut(s) 406, 626
BseYI CCCAGC 2 cut(s) 1742, 2019
BsgI GTGCAG 2 cut(s) 1296, 1416
Bsh1236I CGCG 1 cut(s) 1863
BshFI GGCC 9 cut(s) 593, 748, 775, 1293, 1544, 1554, 1623, 1992, 2312
BshTI ACCGGT 2 cut(s) 1136, 2272
BsiHKAI GWGCWC 3 cut(s) 406, 2109, 2199
BsiHKCI CYCGRG 1 cut(s) 143
BsiSI CCGG 6 cut(s) 144, 777, 1137, 1610, 1932, 2273
BslFI GGGAC 1 cut(s) 888
BsmAI GTCTC 4 cut(s) 455, 1071, 1200, 1955
BsmBI CGTCTC 1 cut(s) 1200
BsmFI GGGAC 1 cut(s) 888
BsmI GAATGC 1 cut(s) 2097
BsnI GGCC 9 cut(s) 593, 748, 775, 1293, 1544, 1554, 1623, 1992, 2312
BsoBI CYCGRG 1 cut(s) 143
Bsp1286I GDGCHC 4 cut(s) 406, 626, 2109, 2199
Bsp143I GATC 4 cut(s) 121, 325, 635, 1054
BspACI CCGC 3 cut(s) 430, 842, 1090
BspANI GGCC 9 cut(s) 593, 748, 775, 1293, 1544, 1554, 1623, 1992, 2312
BspFNI CGCG 1 cut(s) 1863
BspHI TCATGA 2 cut(s) 96, 2101
BspLI GGNNCC 3 cut(s) 976, 1056, 1427
BspMAI CTGCAG 3 cut(s) 229, 1444, 1927
BspOI GCTAGC 1 cut(s) 894
BspPI GGATC 4 cut(s) 116, 320, 1049, 1062
BsrDI GCAATG 1 cut(s) 1982
BsrFI RCCGGY 2 cut(s) 1136, 2272
BsrI ACTGG 8 cut(s) 125, 411, 760, 1312, 1545, 2052, 2185, 2298
BssAI RCCGGY 2 cut(s) 1136, 2272
BssECI CCNNGG 7 cut(s) 143, 144, 343, 541, 715, 1201, 1998
BssMI GATC 4 cut(s) 121, 325, 635, 1054
BssNAI GTATAC 1 cut(s) 43
BssT1I CCWWGG 1 cut(s) 343
Bst1107I GTATAC 1 cut(s) 43
Bst2UI CCWGG 6 cut(s) 519, 543, 575, 690, 717, 1203
Bst4CI ACNGT 5 cut(s) 1133, 1274, 1693, 1914, 2268
Bst6I CTCTTC 2 cut(s) 1042, 1528
BstAPI GCANNNNNTGC 4 cut(s) 274, 289, 298, 1439
BstBAI YACGTR 1 cut(s) 1487
BstC8I GCNNGC 5 cut(s) 892, 1125, 1542, 1552, 1920
BstDSI CCRYGG 1 cut(s) 1998
BstENI CCTNNNNNAGG 1 cut(s) 693
BstFNI CGCG 1 cut(s) 1863
BstHHI GCGC 2 cut(s) 7, 303
BstKTI GATC 4 cut(s) 124, 328, 638, 1057
BstMAI GTCTC 4 cut(s) 455, 1071, 1200, 1955
BstMBI GATC 4 cut(s) 121, 325, 635, 1054
BstNI CCWGG 6 cut(s) 519, 543, 575, 690, 717, 1203
BstNSI RCATGY 5 cut(s) 80, 1021, 1760, 2128, 2209
BstSFI CTRYAG 4 cut(s) 225, 1440, 1723, 1923
BstSLI GKGCMC 2 cut(s) 406, 626
BstSNI TACGTA 1 cut(s) 1487
BstUI CGCG 1 cut(s) 1863
BstV2I GAAGAC 2 cut(s) 722, 1326
BstX2I RGATCY 3 cut(s) 325, 635, 1054
BstXI CCANNNNNNTGG 1 cut(s) 1202
BstYI RGATCY 3 cut(s) 325, 635, 1054
BstZ17I GTATAC 1 cut(s) 43
Bsu36I CCTNAGG 1 cut(s) 1114
BsuI GTATCC 2 cut(s) 2017, 2174
BsuRI GGCC 9 cut(s) 593, 748, 775, 1293, 1544, 1554, 1623, 1992, 2312
BtgI CCRYGG 1 cut(s) 1998
BtsI GCAGTG 3 cut(s) 81, 624, 1252
BtsIMutI CAGTG 6 cut(s) 81, 404, 624, 1252, 1474, 1552
Cac8I GCNNGC 5 cut(s) 892, 1125, 1542, 1552, 1920
CaiI CAGNNNCTG 1 cut(s) 1918
CciI TCATGA 2 cut(s) 96, 2101
CfoI GCGC 2 cut(s) 7, 303
Cfr10I RCCGGY 2 cut(s) 1136, 2272
Cfr13I GGNCC 6 cut(s) 350, 427, 774, 1103, 1157, 1990
Cfr9I CCCGGG 1 cut(s) 143
Csp6I GTAC 6 cut(s) 421, 1076, 1134, 1140, 1270, 2006
CspAI ACCGGT 2 cut(s) 1136, 2272
CviQI GTAC 6 cut(s) 421, 1076, 1134, 1140, 1270, 2006
DpnI GATC 4 cut(s) 123, 327, 637, 1056
DpnII GATC 4 cut(s) 121, 325, 635, 1054
DraI TTTAAA 1 cut(s) 939
EaeI YGGCCR 2 cut(s) 1542, 1552
Eam1104I CTCTTC 2 cut(s) 1042, 1528
EarI CTCTTC 2 cut(s) 1042, 1528
Ecl136II GAGCTC 2 cut(s) 2107, 2197
Eco105I TACGTA 1 cut(s) 1487
Eco130I CCWWGG 1 cut(s) 343
Eco24I GRGCYC 2 cut(s) 2109, 2199
Eco47I GGWCC 4 cut(s) 350, 427, 1103, 1157
Eco53kI GAGCTC 2 cut(s) 2107, 2197
Eco57I CTGAAG 3 cut(s) 393, 1450, 1509
Eco81I CCTNAGG 1 cut(s) 1114
Eco88I CYCGRG 1 cut(s) 143
EcoICRI GAGCTC 2 cut(s) 2107, 2197
EcoNI CCTNNNNNAGG 1 cut(s) 693
EcoO109I RGGNCCY 1 cut(s) 1103
EcoRII CCWGG 6 cut(s) 517, 541, 573, 688, 715, 1201
EcoT14I CCWWGG 1 cut(s) 343
EcoT38I GRGCYC 2 cut(s) 2109, 2199
ErhI CCWWGG 1 cut(s) 343
Esp3I CGTCTC 1 cut(s) 1200
FalI AAGNNNNNCTT 2 cut(s) 366, 398
FaqI GGGAC 1 cut(s) 888
FauNDI CATATG 1 cut(s) 1738
FblI GTMKAC 1 cut(s) 42
FriOI GRGCYC 2 cut(s) 2109, 2199
FspBI CTAG 4 cut(s) 399, 891, 927, 2115
GlaI GCGC 2 cut(s) 6, 302
GsaI CCCAGC 2 cut(s) 1746, 2023
GsuI CTGGAG 2 cut(s) 1224, 2109
HaeIII GGCC 9 cut(s) 593, 748, 775, 1293, 1544, 1554, 1623, 1992, 2312
HapII CCGG 6 cut(s) 144, 777, 1137, 1610, 1932, 2273
HhaI GCGC 2 cut(s) 7, 303
Hin6I GCGC 2 cut(s) 5, 301
HinP1I GCGC 2 cut(s) 5, 301
HincII GTYRAC 1 cut(s) 587
HindII GTYRAC 1 cut(s) 587
HindIII AAGCTT 1 cut(s) 1446
HinfI GANTC 7 cut(s) 455, 650, 1367, 1825, 1893, 2060, 2161
HpaII CCGG 6 cut(s) 144, 777, 1137, 1610, 1932, 2273
HphI GGTGA 3 cut(s) 831, 1900, 2262
Hpy166II GTNNAC 7 cut(s) 43, 353, 404, 587, 788, 1730, 2008
Hpy188I TCNGA 9 cut(s) 217, 312, 373, 460, 525, 633, 1528, 2069, 2212
Hpy188III TCNNGA 8 cut(s) 97, 1116, 2057, 2088, 2102, 2200, 2303, 2323
Hpy8I GTNNAC 7 cut(s) 43, 353, 404, 587, 788, 1730, 2008
HpyCH4III ACNGT 5 cut(s) 1133, 1274, 1693, 1914, 2268
HpyCH4IV ACGT 1 cut(s) 1486
HpySE526I ACGT 1 cut(s) 1486
HspAI GCGC 2 cut(s) 5, 301
Kzo9I GATC 4 cut(s) 121, 325, 635, 1054
LmnI GCTCC 4 cut(s) 145, 980, 1615, 2194
MaeI CTAG 4 cut(s) 399, 891, 927, 2115
MaeII ACGT 1 cut(s) 1486
MaeIII GTNAC 7 cut(s) 79, 1020, 1377, 1764, 2268, 2275, 2300
MalI GATC 4 cut(s) 123, 327, 637, 1056
MboI GATC 4 cut(s) 121, 325, 635, 1054
MboII GAAGA 9 cut(s) 76, 645, 722, 1029, 1331, 1367, 1515, 1668, 1798
MfeI CAATTG 2 cut(s) 450, 1152
MflI RGATCY 3 cut(s) 325, 635, 1054
MhlI GDGCHC 4 cut(s) 406, 626, 2109, 2199
MlsI TGGCCA 2 cut(s) 1544, 1554
MluNI TGGCCA 2 cut(s) 1544, 1554
MlyI GAGTC 3 cut(s) 464, 2069, 2155
MmeI TCCRAC 2 cut(s) 1296, 1921
Mox20I TGGCCA 2 cut(s) 1544, 1554
MscI TGGCCA 2 cut(s) 1544, 1554
MseI TTAA 6 cut(s) 552, 615, 752, 938, 1842, 2316
MslI CAYNNNNRTG 4 cut(s) 1386, 1691, 2242, 2244
Msp20I TGGCCA 2 cut(s) 1544, 1554
MspA1I CMGCKG 2 cut(s) 274, 1280
MspI CCGG 6 cut(s) 144, 777, 1137, 1610, 1932, 2273
MunI CAATTG 2 cut(s) 450, 1152
Mva1269I GAATGC 1 cut(s) 2097
MvaI CCWGG 6 cut(s) 519, 543, 575, 690, 717, 1203
MvnI CGCG 1 cut(s) 1863
NciI CCSGG 4 cut(s) 144, 145, 777, 1933
NdeI CATATG 1 cut(s) 1738
NdeII GATC 4 cut(s) 121, 325, 635, 1054
NheI GCTAGC 1 cut(s) 890
NlaIV GGNNCC 3 cut(s) 976, 1056, 1427
NmuCI GTSAC 6 cut(s) 79, 1020, 1377, 1764, 2268, 2300
NspI RCATGY 5 cut(s) 80, 1021, 1760, 2128, 2209
OliI CACNNNNGTG 2 cut(s) 1691, 2242
PagI TCATGA 2 cut(s) 96, 2101
PciI ACATGT 5 cut(s) 76, 1017, 1756, 2124, 2205
PcsI WCGNNNNNNNCGW 1 cut(s) 2310
PctI GAATGC 1 cut(s) 2097
PfeI GAWTC 4 cut(s) 650, 1367, 1825, 1893
PflMI CCANNNNNTGG 2 cut(s) 722, 2191
PfoI TCCNGGA 1 cut(s) 1931
PinAI ACCGGT 2 cut(s) 1136, 2272
PleI GAGTC 3 cut(s) 463, 2068, 2155
PpsI GAGTC 3 cut(s) 463, 2068, 2155
Ppu21I YACGTR 1 cut(s) 1487
PpuMI RGGWCCY 1 cut(s) 1103
PscI ACATGT 5 cut(s) 76, 1017, 1756, 2124, 2205
PshBI ATTAAT 1 cut(s) 1842
Psp124BI GAGCTC 2 cut(s) 2109, 2199
Psp5II RGGWCCY 1 cut(s) 1103
Psp6I CCWGG 6 cut(s) 517, 541, 573, 688, 715, 1201
PspFI CCCAGC 2 cut(s) 1742, 2019
PspGI CCWGG 6 cut(s) 517, 541, 573, 688, 715, 1201
PspN4I GGNNCC 3 cut(s) 976, 1056, 1427
PspPI GGNCC 6 cut(s) 350, 427, 774, 1103, 1157, 1990
PspPPI RGGWCCY 1 cut(s) 1103
PstI CTGCAG 3 cut(s) 229, 1444, 1927
PstNI CAGNNNCTG 1 cut(s) 1918
PsuI RGATCY 3 cut(s) 325, 635, 1054
PvuII CAGCTG 2 cut(s) 274, 1280
RsaI GTAC 6 cut(s) 422, 1077, 1135, 1141, 1271, 2007
RsaNI GTAC 6 cut(s) 421, 1076, 1134, 1140, 1270, 2006
RseI CAYNNNNRTG 4 cut(s) 1386, 1691, 2242, 2244
SacI GAGCTC 2 cut(s) 2109, 2199
SaqAI TTAA 6 cut(s) 552, 615, 752, 938, 1842, 2316
Sau3AI GATC 4 cut(s) 121, 325, 635, 1054
Sau96I GGNCC 6 cut(s) 350, 427, 774, 1103, 1157, 1990
SchI GAGTC 3 cut(s) 464, 2069, 2155
SduI GDGCHC 4 cut(s) 406, 626, 2109, 2199
SfcI CTRYAG 4 cut(s) 225, 1440, 1723, 1923
SinI GGWCC 4 cut(s) 350, 427, 1103, 1157
SmaI CCCGGG 1 cut(s) 145
SmiI ATTTAAAT 1 cut(s) 939
SmiMI CAYNNNNRTG 4 cut(s) 1386, 1691, 2242, 2244
SnaBI TACGTA 1 cut(s) 1487
SsiI CCGC 3 cut(s) 430, 842, 1090
SspI AATATT 1 cut(s) 1840
SspMI CTAG 4 cut(s) 399, 891, 927, 2115
SstI GAGCTC 2 cut(s) 2109, 2199
StyI CCWWGG 1 cut(s) 343
SwaI ATTTAAAT 1 cut(s) 939
TaaI ACNGT 5 cut(s) 1133, 1274, 1693, 1914, 2268
TaiI ACGT 1 cut(s) 1489
TaqI TCGA 4 cut(s) 580, 1241, 1642, 2159
TaqII GACCGA 1 cut(s) 116
TatI WGTACW 1 cut(s) 1075
TfiI GAWTC 4 cut(s) 650, 1367, 1825, 1893
Tru1I TTAA 6 cut(s) 552, 615, 752, 938, 1842, 2316
Tru9I TTAA 6 cut(s) 552, 615, 752, 938, 1842, 2316
TscAI CASTG 6 cut(s) 88, 411, 631, 1252, 1474, 1552
TseFI GTSAC 6 cut(s) 79, 1020, 1377, 1764, 2268, 2300
Tsp45I GTSAC 6 cut(s) 79, 1020, 1377, 1764, 2268, 2300
TspDTI ATGAA 9 cut(s) 85, 993, 1028, 1029, 1098, 1647, 1668, 1971, 2090
TspGWI ACGGA 4 cut(s) 334, 1224, 1438, 2015
TspMI CCCGGG 1 cut(s) 143
TspRI CASTG 6 cut(s) 88, 411, 631, 1252, 1474, 1552
Van91I CCANNNNNTGG 2 cut(s) 722, 2191
VneI GTGCAC 1 cut(s) 402
VpaK11BI GGWCC 4 cut(s) 350, 427, 1103, 1157
VspI ATTAAT 1 cut(s) 1842
XagI CCTNNNNNAGG 1 cut(s) 693
XapI RAATTY 5 cut(s) 358, 934, 1000, 1237, 1654
XceI RCATGY 5 cut(s) 80, 1021, 1760, 2128, 2209
XcmI CCANNNNNNNNNTGG 3 cut(s) 741, 1312, 1904
XmaI CCCGGG 1 cut(s) 143
XmiI GTMKAC 1 cut(s) 42
XspI CTAG 4 cut(s) 399, 891, 927, 2115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.