Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006171

Physical Location & Seq

Genomic Coordinates Reverse (-)

14277558 .. 14283113

Gene Structure 5556 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G33770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2724 bp

ATGGAAATGTCCCTTACTGACTCTGATTGGGATAGCTCCAGCGACAGTGGTAGCAGTGAACACGAAGAAGTCGAGTTTTCTTATGGTGGACGGGCACAGAACATTTTCTCAAACCTTGAAGAAACCATTGGCAAAATCGATGAGTTCCTGTCGTTCGAGAGGGGATTTATGTATGGTGACATTGTGCGGTCCGCCACTGAACCATCAGGACAGAGTGGCAGGGTTATCAACATAGACATGTTTGTCAATCTCGAAAGTACTCATGGGAAGATCATGAAGGAAGTTGATACCAAGAGGCTTCAAAAGTTGCGTTCTATTTCACTCTCTGATTATGTGATTAACGGACCTTGGGTTGGAAGGGTTGACAAAATAGTTGAGCGTGTCTCTGTCACCCTTGATGATGGGACCAACTATGAGGTCCTTGTAGATGGTCAAGATAAACTTGTGGCCATTCCCCCAAATTTACTCGAGGATTCTCAATATTCGTATTACCCAGGGCAAAGAGTTCAGGTAAAGCTGGCCCATGCCCCCAGATCAACTACATGGTTATGCGGGACCTGGAGAGGAACCCAGGTTATGGGAACTGTTTGCACTGTAGAAGCAGGACTTGTCTACGTCGATTGGGTTGCCTCCATCGTAATGGAGGGTGATCGGAATTTAACTGCACCTCAAGCTTTGCAGAATCCTGAGAGTTTAACTTTGTTACCTTGTGTTTCTCATGCGAGTTGGCAGCTTGGTGACTGGTGTATACTCCCTGGCTCTTCCCACTGTGATATAGCAGAGCGGCAAACTCCAAATGTGGCTGCCTACAATCTCAATGAATGCCATAAGACATTCCAAAAAGGGTTTAACAGAAATATGCAGAACTCAGGTTTGGATGAGCTATTTGTTATCACAAAGACAAAGATGAAGGTTGCTGTTATGTGGCAAGATGGTAGCTGCAGTCTGGGAGTTGATTCCCAACAGCTGCTTCCTGTTGGTGCTGTTAATGCTCATGATTTTTGGCCCGAACAGTTTGTTGTGGAAAAGGAAACCTGCAACAGCAAAAAATGGGGAGTTGTGAAGGCTGTCAATGCTAAGGAACAAACTGTGAAGGTACAATGGACAATACAGGTTGAGAAAGAAGCAACAGGTTGTGTTGATGAGGTGATGGAAGAAATTGTCAGTGCATATGAACTGCTTGAGCACCCTGATTTTGGATTCTGTTTCAGCGATGTGGTGGTCAAGTTACTTCCAGAAGGAAAATTTGATCCAAATGCAGACACAATCGTCGCTACAGAGGCGAAACACCTACTTACAGAGAGTGACTACAGTGGCGCATATTTTTTGTCAAGTATTGGTGTTGTTACAGGTTTTAAAAATGGTTCCGTGAAGGTGAAATGGGCCAATGGTTCTACTAGCAAGGTTGCACCATGTGAAATTTGGAAAATGGAAAGGTCTGAATATTCCAACTCTAGCACTGTAAGTTCGGAAGGCAGTGTTCAAGATCTAAGTCAGAAGATTAGTCAATCGGATGAAGCATCTTCAAACCATCAGGAAACGGGTCTGGTGAAGCTCTACAGTGTTGGTGAAAGTTGCAACGAGAACATTCCGGAATGTAGTTCATTTTTCCTTCCAAAAGCTGCCATTGGATTTATCACAAACCTTGCATCAAGCCTTTTTGGTTATCAGGGTTCCACTTCGGTTATAAGTTCACATTCACGTTGCAATGATTCTGAAGATCAAAGTGACTCTGAGGTCCTTGTTCAAGAAACAGCAGAATCATATGACAACTCTGAAACAAATTCAGGTGAAGTGGATATGACCACCACGATGGTCAACATACCTATAGAAGGAAAAGGAATTAACAAGACACTGGATTCAACTCTTCTAGAGAACAGCAGGAACCAAGTGAGATTCAGACAGTTTGATATGGTTAATGACTGCTCGGACCATCATTTCCTTTCTTCGGATAAAGGGTTGGCTCAGTCCCAGGTCACAAAGAGTTGGGTGAAGAAAGTCCAGCAAGAATGGAGCAATTTGGAGGCAAATCTTCCGAACACGATATATGTGCGTGTGTGTGAAGAAAGGATGGACCTTCTGCGTGCAGCCCTGGTTGGTGCCCCTGGAACGCCATATCACGATGGGCTTTTCTTTTTCGACATAATGCTTCCACCTCAATATCCTCATGAGCCACCAATGGTACATTATCATTCAGGTGGGATGCGACTGAATCCGAACCTGTATGAGTCAGGAAGAGTTTGCTTGAGTCTGCTGAATACATGGAGTGGCTCTGGCACTGAAGTATGGAACGCAGGGAGCTCCTCCATCCTTCAACTTCTTCTTTCGTTTCAGGCTCTGGTTCTGAATGAGAAGCCTTACTTCAATGAAGCTGGCTATGATAAGCAGTTGGGCCGAGCCGAGGGAGAGAAAAACTCAGTGAGTTACAATGAGAATGCATTCCTCATAACCTGCAAATCCATGATCTCAATGCTCCGTAAGCCTCCAAAGCATTTTGAGATGCTTGTGAAGGACCATTTTACGCACCGGGCCCAGCATGTTCTGGCTGCGTGCAAGGCTTATATGGAAGGCGTCCCTGTAGGATCATCAGCTAACCTGCAGGGGAACTCAACCACAAATTCCACCGGTTTCAAGATCATGCTCTCCAAACTCTACCCAAAACTTCTTGAAGCATTCTCAGAGATTGGAGTTGATTGCGTCCAAGAGATTGGACCAGAATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0006464 GO:0006807 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0010966 GO:0012505 GO:0015698 GO:0016036 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0030163 GO:0031625 GO:0031667 GO:0031668 GO:0031669 GO:0032446 GO:0032879 GO:0033554 GO:0034762 GO:0034765 GO:0036211 GO:0042592 GO:0042594 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043412 GO:0044070 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0048878 GO:0050789 GO:0050801 GO:0050896 GO:0051049 GO:0051179 GO:0051234 GO:0051716 GO:0055062 GO:0055081 GO:0055083 GO:0061630 GO:0061659 GO:0065007 GO:0065008 GO:0070647 GO:0071496 GO:0071704 GO:0072505 GO:0072506 GO:0098771 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1903795 GO:1903959 GO:2000185

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

907

Amino Acids

100.48

Weight (kDa)

4.93

Isoelectric Point (pI)

35.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tSH3-B_UBE2O	PF23046	110 - 240	3e-33	UBE2O, tandem tSH3-B domain
SH3-B_UBE2O	PF23043	332 - 398	1.3e-15	UBE2O, SH3-B domain
SH3-C_UBE2O	PF23044	440 - 484	4.3e-07	UBE2O, ubiquitin binding SH3-C domain
UQ_con	PF00179	667 - 812	8.6e-21	Ubiquitin-conjugating enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006171)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33770
fragaria_vesca	FvH4_3g09200 FvH4_3g29950
malus_domestica	MD05G1312700.v1.1 MD10G1294500.v1.1
prunus_persica	Prupe.4G047400_v2.0.a1 Prupe.4G047400_v2.0.a1
pyrus_communis	pycom05g29070 pycom05g29080 pycom10g24620 pycom10g24630 pycom10g24640
rosa_chinensis	RchiOBHm_Chr5g0008401
rosa_laevigata	RLG00000031568
rosa_multiflora	Rmu_co8007308.1_g000001 Rmu_co8292313.1_g000001 Rmu_sc0004326.1_g000003 Rmu_sc0028200.1_g000001 Rmu_ssc0000388.1_g000061
rosa_roxburghii	Rroxscaffold_1G00068090
rosa_rugosa	Rorug04G0435600
rosa_samantha	Rh5AG064200 Rh5BG061400 Rh5CG071300 Rh5DG060200 Rh5DG060300
rosa_wichuraiana	Rw5G005660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1688
AasI	GACNNNNNNGTC	3 cut(s)	242, 1268, 1736
Acc36I	ACCTGC	3 cut(s)	1043, 2459, 2604
AccB1I	GGYRCC	1 cut(s)	2099
AccB7I	CCANNNNNTGG	1 cut(s)	577
AccBSI	CCGCTC	1 cut(s)	784
AccI	GTMKAC	2 cut(s)	612, 748
AccIII	TCCGGA	1 cut(s)	1591
AciI	CCGC	4 cut(s)	187, 192, 552, 784
AclWI	GGATC	2 cut(s)	1244, 2590
AcoI	YGGCCR	1 cut(s)	447
AcsI	RAATTY	6 cut(s)	460, 655, 1244, 1419, 1783, 2617
AcuI	CTGAAG	2 cut(s)	1737, 2301
AcyI	GRCGYC	1 cut(s)	2571
AdeI	CACNNNGTG	1 cut(s)	1415
AfaI	GTAC	3 cut(s)	259, 1098, 2184
AfiI	CCNNNNNNNGG	6 cut(s)	353, 577, 1196, 1832, 1948, 2401
AflIII	ACRYGT	1 cut(s)	237
AgeI	ACCGGT	1 cut(s)	2624
AjnI	CCWGG	7 cut(s)	493, 557, 570, 754, 1971, 2091, 2104
AjuI	GAANNNNNNNTTGG	6 cut(s)	111, 143, 857, 889, 954, 986
Alw21I	GWGCWC	2 cut(s)	1188, 2303
Alw26I	GTCTC	1 cut(s)	388
AlwI	GGATC	2 cut(s)	1244, 2590
AlwNI	CAGNNNCTG	1 cut(s)	2338
Ama87I	CYCGRG	1 cut(s)	467
Aor13HI	TCCGGA	1 cut(s)	1591
AoxI	GGCC	6 cut(s)	447, 519, 1004, 1383, 2392, 2529
ApaI	GGGCCC	1 cut(s)	2533
ApeKI	GCWGC	7 cut(s)	730, 803, 939, 967, 1622, 2087, 2546
ApoI	RAATTY	6 cut(s)	460, 655, 1244, 1419, 1783, 2617
AsiGI	ACCGGT	1 cut(s)	2624
Asp700I	GAANNNNTTC	2 cut(s)	104, 2438
AspLEI	GCGC	1 cut(s)	1319
AsuC2I	CCSGG	1 cut(s)	2528
AvaI	CYCGRG	1 cut(s)	467
BaeGI	GKGCMC	3 cut(s)	97, 2104, 2533
BalI	TGGCCA	1 cut(s)	449
BanI	GGYRCC	1 cut(s)	2099
BanII	GRGCYC	2 cut(s)	2303, 2533
Bbv12I	GWGCWC	2 cut(s)	1188, 2303
BbvI	GCAGC	7 cut(s)	742, 790, 926, 954, 1609, 2099, 2533
BcgI	CGANNNNNNTGC	4 cut(s)	608, 642, 2032, 2066
BciT130I	CCWGG	7 cut(s)	495, 559, 572, 756, 1973, 2093, 2106
BcnI	CCSGG	1 cut(s)	2528
BcoDI	GTCTC	1 cut(s)	388
BfaI	CTAG	3 cut(s)	1398, 1455, 1871
BfmI	CTRYAG	8 cut(s)	594, 940, 1275, 1309, 1558, 1827, 2577, 2597
BfuAI	ACCTGC	3 cut(s)	1043, 2459, 2604
BglII	AGATCT	1 cut(s)	1486
BisI	GCNGC	8 cut(s)	731, 785, 804, 940, 968, 1623, 2088, 2547
BlsI	GCNGC	8 cut(s)	732, 786, 805, 941, 969, 1624, 2089, 2548
BmcAI	AGTACT	1 cut(s)	259
Bme1390I	CCNGG	8 cut(s)	495, 559, 572, 756, 1973, 2093, 2106, 2528
BmeT110I	CYCGRG	1 cut(s)	467
BmiI	GGNNCC	8 cut(s)	406, 556, 568, 1366, 1675, 1886, 2101, 2531
BmrFI	CCNGG	8 cut(s)	495, 559, 572, 756, 1973, 2093, 2106, 2528
BmsI	GCATC	4 cut(s)	1529, 1658, 2193, 2490
BplI	GAGNNNNNCTC	4 cut(s)	368, 400, 2399, 2431
BpmI	CTGGAG	2 cut(s)	22, 580
Bpu10I	CCTNAGC	1 cut(s)	1077
BpuEI	CTTGAG	3 cut(s)	654, 1202, 2266
BpuMI	CCSGG	1 cut(s)	2528
Bsa29I	ATCGAT	1 cut(s)	138
BsaHI	GRCGYC	1 cut(s)	2571
BsaJI	CCNNGG	9 cut(s)	347, 493, 494, 570, 754, 1971, 2091, 2104, 2400
BsaWI	WCCGGW	2 cut(s)	1591, 2624
Bsc4I	CCNNNNNNNGG	6 cut(s)	353, 577, 1196, 1832, 1948, 2401
Bse118I	RCCGGY	1 cut(s)	2624
Bse1I	ACTGG	2 cut(s)	746, 1860
Bse3DI	GCAATG	1 cut(s)	1714
BseAI	TCCGGA	1 cut(s)	1591
BseBI	CCWGG	7 cut(s)	495, 559, 572, 756, 1973, 2093, 2106
BseCI	ATCGAT	1 cut(s)	138
BseDI	CCNNGG	9 cut(s)	347, 493, 494, 570, 754, 1971, 2091, 2104, 2400
BseGI	GGATG	5 cut(s)	883, 1519, 2076, 2208, 2307
BseLI	CCNNNNNNNGG	6 cut(s)	353, 577, 1196, 1832, 1948, 2401
BseMI	GCAATG	1 cut(s)	1714
BseMII	CTCAG	6 cut(s)	678, 882, 1725, 1979, 2430, 2691
BseNI	ACTGG	2 cut(s)	746, 1860
BseRI	GAGGAG	1 cut(s)	2293
BseSI	GKGCMC	3 cut(s)	97, 2104, 2533
BseXI	GCAGC	7 cut(s)	742, 790, 926, 954, 1609, 2099, 2533
BseYI	CCCAGC	1 cut(s)	2532
BsgI	GTGCAG	2 cut(s)	648, 2106
BshFI	GGCC	6 cut(s)	449, 521, 1006, 1385, 2394, 2531
BshNI	GGYRCC	1 cut(s)	2099
BshTI	ACCGGT	1 cut(s)	2624
BshVI	ATCGAT	1 cut(s)	138
BsiHKAI	GWGCWC	2 cut(s)	1188, 2303
BsiHKCI	CYCGRG	1 cut(s)	467
BsiSI	CCGG	3 cut(s)	1592, 2527, 2625
BslFI	GGGAC	4 cut(s)	418, 568, 1954, 2558
BslI	CCNNNNNNNGG	6 cut(s)	353, 577, 1196, 1832, 1948, 2401
BsmAI	GTCTC	1 cut(s)	388
BsmFI	GGGAC	4 cut(s)	418, 568, 1954, 2558
BsmI	GAATGC	4 cut(s)	827, 2438, 2440, 2672
BsnI	GGCC	6 cut(s)	449, 521, 1006, 1385, 2394, 2531
BsoBI	CYCGRG	1 cut(s)	467
Bsp120I	GGGCCC	1 cut(s)	2529
Bsp1286I	GDGCHC	5 cut(s)	97, 1188, 2104, 2303, 2533
Bsp13I	TCCGGA	1 cut(s)	1591
Bsp143I	GATC	9 cut(s)	270, 533, 649, 1249, 1486, 1720, 2463, 2582, 2634
BspACI	CCGC	4 cut(s)	187, 192, 552, 784
BspANI	GGCC	6 cut(s)	449, 521, 1006, 1385, 2394, 2531
BspCNI	CTCAG	6 cut(s)	679, 881, 1726, 1978, 2429, 2690
BspDI	ATCGAT	1 cut(s)	138
BspEI	TCCGGA	1 cut(s)	1591
BspHI	TCATGA	3 cut(s)	273, 994, 2167
BspLI	GGNNCC	8 cut(s)	406, 556, 568, 1366, 1675, 1886, 2101, 2531
BspMAI	CTGCAG	2 cut(s)	944, 2601
BspMI	ACCTGC	3 cut(s)	1043, 2459, 2604
BspPI	GGATC	2 cut(s)	1244, 2590
BspQI	GCTCTTC	1 cut(s)	766
BspT107I	GGYRCC	1 cut(s)	2099
BsrBI	CCGCTC	1 cut(s)	784
BsrDI	GCAATG	1 cut(s)	1714
BsrFI	RCCGGY	1 cut(s)	2624
BsrI	ACTGG	2 cut(s)	746, 1860
BssAI	RCCGGY	1 cut(s)	2624
BssECI	CCNNGG	9 cut(s)	347, 493, 494, 570, 754, 1971, 2091, 2104, 2400
BssMI	GATC	9 cut(s)	270, 533, 649, 1249, 1486, 1720, 2463, 2582, 2634
BssNAI	GTATAC	1 cut(s)	749
BssNI	GRCGYC	1 cut(s)	2571
BssT1I	CCWWGG	1 cut(s)	347
Bst1107I	GTATAC	1 cut(s)	749
Bst2UI	CCWGG	7 cut(s)	495, 559, 572, 756, 1973, 2093, 2106
Bst6I	CTCTTC	3 cut(s)	766, 1872, 2230
BstACI	GRCGYC	1 cut(s)	2571
BstC8I	GCNNGC	4 cut(s)	519, 2085, 2374, 2551
BstDEI	CTNAG	8 cut(s)	687, 868, 1077, 1490, 1734, 1965, 2416, 2677
BstENI	CCTNNNNNAGG	1 cut(s)	1830
BstF5I	GGATG	5 cut(s)	883, 1519, 2076, 2208, 2307
BstHHI	GCGC	1 cut(s)	1319
BstKTI	GATC	9 cut(s)	273, 536, 652, 1252, 1489, 1723, 2466, 2585, 2637
BstMAI	GTCTC	1 cut(s)	388
BstMBI	GATC	9 cut(s)	270, 533, 649, 1249, 1486, 1720, 2463, 2582, 2634
BstMWI	GCNNNNNNNGC	7 cut(s)	671, 989, 1073, 1280, 2479, 2488, 2555
BstNI	CCWGG	7 cut(s)	495, 559, 572, 756, 1973, 2093, 2106
BstNSI	RCATGY	2 cut(s)	241, 2540
BstSCI	CCNGG	8 cut(s)	493, 557, 570, 754, 1971, 2091, 2104, 2526
BstSFI	CTRYAG	8 cut(s)	594, 940, 1275, 1309, 1558, 1827, 2577, 2597
BstSLI	GKGCMC	3 cut(s)	97, 2104, 2533
BstV1I	GCAGC	7 cut(s)	742, 790, 926, 954, 1609, 2099, 2533
BstX2I	RGATCY	1 cut(s)	1486
BstXI	CCANNNNNNTGG	3 cut(s)	640, 1813, 2708
BstYI	RGATCY	1 cut(s)	1486
BstZ17I	GTATAC	1 cut(s)	749
Bsu15I	ATCGAT	1 cut(s)	138
BsuRI	GGCC	6 cut(s)	449, 521, 1006, 1385, 2394, 2531
BsuTUI	ATCGAT	1 cut(s)	138
BtgZI	GCGATG	1 cut(s)	1227
BtsCI	GGATG	5 cut(s)	883, 1519, 2076, 2208, 2307
BtsI	GCAGTG	2 cut(s)	61, 1483
BveI	ACCTGC	3 cut(s)	1043, 2459, 2604
Cac8I	GCNNGC	4 cut(s)	519, 2085, 2374, 2551
CaiI	CAGNNNCTG	1 cut(s)	2338
CciI	TCATGA	3 cut(s)	273, 994, 2167
CfoI	GCGC	1 cut(s)	1319
Cfr10I	RCCGGY	1 cut(s)	2624
ClaI	ATCGAT	1 cut(s)	138
CpoI	CGGWCCG	1 cut(s)	189
CseI	GACGC	2 cut(s)	2560, 2686
Csp6I	GTAC	3 cut(s)	258, 1097, 2183
CspAI	ACCGGT	1 cut(s)	2624
CspI	CGGWCCG	1 cut(s)	189
CviQI	GTAC	3 cut(s)	258, 1097, 2183
DdeI	CTNAG	8 cut(s)	687, 868, 1077, 1490, 1734, 1965, 2416, 2677
DpnI	GATC	9 cut(s)	272, 535, 651, 1251, 1488, 1722, 2465, 2584, 2636
DpnII	GATC	9 cut(s)	270, 533, 649, 1249, 1486, 1720, 2463, 2582, 2634
DraI	TTTAAA	1 cut(s)	1357
DraIII	CACNNNGTG	1 cut(s)	1415
DrdI	GACNNNNNNGTC	3 cut(s)	242, 1268, 1736
DseDI	GACNNNNNNGTC	3 cut(s)	242, 1268, 1736
EaeI	YGGCCR	1 cut(s)	447
Eam1104I	CTCTTC	3 cut(s)	766, 1872, 2230
EarI	CTCTTC	3 cut(s)	766, 1872, 2230
EciI	GGCGGA	1 cut(s)	181
Ecl136II	GAGCTC	1 cut(s)	2301
Eco130I	CCWWGG	1 cut(s)	347
Eco24I	GRGCYC	2 cut(s)	2303, 2533
Eco53kI	GAGCTC	1 cut(s)	2301
Eco57I	CTGAAG	2 cut(s)	1737, 2301
Eco88I	CYCGRG	1 cut(s)	467
EcoICRI	GAGCTC	1 cut(s)	2301
EcoNI	CCTNNNNNAGG	1 cut(s)	1830
EcoO109I	RGGNCCY	3 cut(s)	418, 555, 1738
EcoRII	CCWGG	7 cut(s)	493, 557, 570, 754, 1971, 2091, 2104
EcoT14I	CCWWGG	1 cut(s)	347
EcoT22I	ATGCAT	1 cut(s)	2440
EcoT38I	GRGCYC	2 cut(s)	2303, 2533
ErhI	CCWWGG	1 cut(s)	347
FalI	AAGNNNNNCTT	6 cut(s)	426, 458, 591, 623, 2345, 2377
FaqI	GGGAC	4 cut(s)	418, 568, 1954, 2558
FauI	CCCGC	1 cut(s)	545
FauNDI	CATATG	2 cut(s)	1171, 1765
FblI	GTMKAC	2 cut(s)	612, 748
Fnu4HI	GCNGC	8 cut(s)	731, 785, 804, 940, 968, 1623, 2088, 2547
FokI	GGATG	5 cut(s)	890, 1526, 2083, 2215, 2294
FriOI	GRGCYC	2 cut(s)	2303, 2533
Fsp4HI	GCNGC	8 cut(s)	731, 785, 804, 940, 968, 1623, 2088, 2547
FspBI	CTAG	3 cut(s)	1398, 1455, 1871
GlaI	GCGC	1 cut(s)	1318
GluI	GCNGC	8 cut(s)	731, 785, 804, 940, 968, 1623, 2088, 2547
GsaI	CCCAGC	1 cut(s)	2536
GsuI	CTGGAG	2 cut(s)	22, 580
HaeIII	GGCC	6 cut(s)	449, 521, 1006, 1385, 2394, 2531
HapII	CCGG	3 cut(s)	1592, 2527, 2625
HgaI	GACGC	2 cut(s)	2560, 2686
HhaI	GCGC	1 cut(s)	1319
Hin1I	GRCGYC	1 cut(s)	2571
Hin6I	GCGC	1 cut(s)	1317
HinP1I	GCGC	1 cut(s)	1317
HincII	GTYRAC	2 cut(s)	364, 1819
HindII	GTYRAC	2 cut(s)	364, 1819
HindIII	AAGCTT	1 cut(s)	672
HpaII	CCGG	3 cut(s)	1592, 2527, 2625
Hpy166II	GTNNAC	7 cut(s)	59, 89, 364, 613, 749, 1694, 1819
Hpy8I	GTNNAC	7 cut(s)	59, 89, 364, 613, 749, 1694, 1819
Hpy99I	CGWCG	2 cut(s)	620, 1274
HpyCH4IV	ACGT	2 cut(s)	615, 1702
HpyF10VI	GCNNNNNNNGC	7 cut(s)	671, 989, 1073, 1280, 2479, 2488, 2555
HpyF3I	CTNAG	8 cut(s)	687, 868, 1077, 1490, 1734, 1965, 2416, 2677
HpySE526I	ACGT	2 cut(s)	615, 1702
Hsp92I	GRCGYC	1 cut(s)	2571
HspAI	GCGC	1 cut(s)	1317
Kpn2I	TCCGGA	1 cut(s)	1591
Kzo9I	GATC	9 cut(s)	270, 533, 649, 1249, 1486, 1720, 2463, 2582, 2634
LguI	GCTCTTC	1 cut(s)	766
LmnI	GCTCC	5 cut(s)	41, 2013, 2298, 2306, 2478
Lsp1109I	GCAGC	7 cut(s)	742, 790, 926, 954, 1609, 2099, 2533
LweI	GCATC	4 cut(s)	1529, 1658, 2193, 2490
MaeI	CTAG	3 cut(s)	1398, 1455, 1871
MaeII	ACGT	2 cut(s)	615, 1702
MalI	GATC	9 cut(s)	272, 535, 651, 1251, 1488, 1722, 2465, 2584, 2636
MbiI	CCGCTC	1 cut(s)	784
MboI	GATC	9 cut(s)	270, 533, 649, 1249, 1486, 1720, 2463, 2582, 2634
MflI	RGATCY	1 cut(s)	1486
MhlI	GDGCHC	5 cut(s)	97, 1188, 2104, 2303, 2533
MlsI	TGGCCA	1 cut(s)	449
MluCI	AATT	9 cut(s)	460, 655, 1158, 1244, 1419, 1783, 1842, 2017, 2617
MluNI	TGGCCA	1 cut(s)	449
MlyI	GAGTC	4 cut(s)	14, 1724, 2237, 2257
MmeI	TCCRAC	2 cut(s)	334, 1473
Mox20I	TGGCCA	1 cut(s)	449
Mph1103I	ATGCAT	1 cut(s)	2440
MroI	TCCGGA	1 cut(s)	1591
MroXI	GAANNNNTTC	2 cut(s)	104, 2438
MscI	TGGCCA	1 cut(s)	449
MseI	TTAA	8 cut(s)	339, 659, 695, 849, 987, 1356, 1845, 1917
MslI	CAYNNNNRTG	5 cut(s)	236, 547, 638, 1811, 2196
Msp20I	TGGCCA	1 cut(s)	449
MspA1I	CMGCKG	1 cut(s)	967
MspI	CCGG	3 cut(s)	1592, 2527, 2625
MspR9I	CCNGG	8 cut(s)	495, 559, 572, 756, 1973, 2093, 2106, 2528
Mva1269I	GAATGC	4 cut(s)	827, 2438, 2440, 2672
MvaI	CCWGG	7 cut(s)	495, 559, 572, 756, 1973, 2093, 2106
MwoI	GCNNNNNNNGC	7 cut(s)	671, 989, 1073, 1280, 2479, 2488, 2555
NciI	CCSGG	1 cut(s)	2528
NdeI	CATATG	2 cut(s)	1171, 1765
NdeII	GATC	9 cut(s)	270, 533, 649, 1249, 1486, 1720, 2463, 2582, 2634
NlaIV	GGNNCC	8 cut(s)	406, 556, 568, 1366, 1675, 1886, 2101, 2531
NmeAIII	GCCGAG	2 cut(s)	2420, 2425
NmuCI	GTSAC	6 cut(s)	176, 388, 737, 1304, 1727, 1975
NsiI	ATGCAT	1 cut(s)	2440
NspI	RCATGY	2 cut(s)	241, 2540
PaeR7I	CTCGAG	1 cut(s)	467
PagI	TCATGA	3 cut(s)	273, 994, 2167
PasI	CCCWGGG	1 cut(s)	494
PciI	ACATGT	1 cut(s)	237
PciSI	GCTCTTC	1 cut(s)	766
PcsI	WCGNNNNNNNCGW	1 cut(s)	69
PctI	GAATGC	4 cut(s)	827, 2438, 2440, 2672
PdmI	GAANNNNTTC	2 cut(s)	104, 2438
PflMI	CCANNNNNTGG	1 cut(s)	577
PinAI	ACCGGT	1 cut(s)	2624
PkrI	GCNGC	8 cut(s)	732, 786, 805, 941, 969, 1624, 2089, 2548
PleI	GAGTC	4 cut(s)	14, 1724, 2236, 2256
PpsI	GAGTC	4 cut(s)	14, 1724, 2236, 2256
PpuMI	RGGWCCY	3 cut(s)	418, 555, 1738
PscI	ACATGT	1 cut(s)	237
PsiI	TTATAA	1 cut(s)	1688
Psp124BI	GAGCTC	1 cut(s)	2303
Psp5II	RGGWCCY	3 cut(s)	418, 555, 1738
Psp6I	CCWGG	7 cut(s)	493, 557, 570, 754, 1971, 2091, 2104
PspFI	CCCAGC	1 cut(s)	2532
PspGI	CCWGG	7 cut(s)	493, 557, 570, 754, 1971, 2091, 2104
PspN4I	GGNNCC	8 cut(s)	406, 556, 568, 1366, 1675, 1886, 2101, 2531
PspOMI	GGGCCC	1 cut(s)	2529
PspPPI	RGGWCCY	3 cut(s)	418, 555, 1738
PspXI	VCTCGAGB	1 cut(s)	467
PstI	CTGCAG	2 cut(s)	944, 2601
PstNI	CAGNNNCTG	1 cut(s)	2338
PsuI	RGATCY	1 cut(s)	1486
PvuII	CAGCTG	1 cut(s)	967
RsaI	GTAC	3 cut(s)	259, 1098, 2184
RsaNI	GTAC	3 cut(s)	258, 1097, 2183
RseI	CAYNNNNRTG	5 cut(s)	236, 547, 638, 1811, 2196
Rsr2I	CGGWCCG	1 cut(s)	189
RsrII	CGGWCCG	1 cut(s)	189
SacI	GAGCTC	1 cut(s)	2303
SapI	GCTCTTC	1 cut(s)	766
SaqAI	TTAA	8 cut(s)	339, 659, 695, 849, 987, 1356, 1845, 1917
SatI	GCNGC	8 cut(s)	731, 785, 804, 940, 968, 1623, 2088, 2547
Sau3AI	GATC	9 cut(s)	270, 533, 649, 1249, 1486, 1720, 2463, 2582, 2634
SbfI	CCTGCAGG	1 cut(s)	2601
ScaI	AGTACT	1 cut(s)	259
SchI	GAGTC	4 cut(s)	14, 1724, 2237, 2257
ScrFI	CCNGG	8 cut(s)	495, 559, 572, 756, 1973, 2093, 2106, 2528
SdaI	CCTGCAGG	1 cut(s)	2601
SduI	GDGCHC	5 cut(s)	97, 1188, 2104, 2303, 2533
SfaNI	GCATC	4 cut(s)	1529, 1658, 2193, 2490
SfcI	CTRYAG	8 cut(s)	594, 940, 1275, 1309, 1558, 1827, 2577, 2597
Sfr274I	CTCGAG	1 cut(s)	467
SlaI	CTCGAG	1 cut(s)	467
SmiMI	CAYNNNNRTG	5 cut(s)	236, 547, 638, 1811, 2196
SmlI	CTYRAG	4 cut(s)	467, 669, 1181, 2245
SmoI	CTYRAG	4 cut(s)	467, 669, 1181, 2245
Sse8387I	CCTGCAGG	1 cut(s)	2601
Sse9I	AATT	9 cut(s)	460, 655, 1158, 1244, 1419, 1783, 1842, 2017, 2617
SsiI	CCGC	4 cut(s)	187, 192, 552, 784
SspI	AATATT	2 cut(s)	482, 1445
SspMI	CTAG	3 cut(s)	1398, 1455, 1871
SstI	GAGCTC	1 cut(s)	2303
StyD4I	CCNGG	8 cut(s)	493, 557, 570, 754, 1971, 2091, 2104, 2526
StyI	CCWWGG	1 cut(s)	347
TaiI	ACGT	2 cut(s)	618, 1705
TaqI	TCGA	7 cut(s)	72, 138, 156, 252, 468, 618, 2139
TasI	AATT	9 cut(s)	460, 655, 1158, 1244, 1419, 1783, 1842, 2017, 2617
TatI	WGTACW	1 cut(s)	257
TauI	GCSGC	1 cut(s)	787
Tru1I	TTAA	8 cut(s)	339, 659, 695, 849, 987, 1356, 1845, 1917
Tru9I	TTAA	8 cut(s)	339, 659, 695, 849, 987, 1356, 1845, 1917
TseFI	GTSAC	6 cut(s)	176, 388, 737, 1304, 1727, 1975
TseI	GCWGC	7 cut(s)	730, 803, 939, 967, 1622, 2087, 2546
Tsp45I	GTSAC	6 cut(s)	176, 388, 737, 1304, 1727, 1975
TspDTI	ATGAA	7 cut(s)	290, 834, 923, 1188, 1530, 1593, 2382
TspGWI	ACGGA	3 cut(s)	357, 1357, 2465
Van91I	CCANNNNNTGG	1 cut(s)	577
XagI	CCTNNNNNAGG	1 cut(s)	1830
XapI	RAATTY	6 cut(s)	460, 655, 1244, 1419, 1783, 2617
XbaI	TCTAGA	1 cut(s)	1870
XceI	RCATGY	2 cut(s)	241, 2540
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1419
XhoI	CTCGAG	1 cut(s)	467
XmiI	GTMKAC	2 cut(s)	612, 748
XmnI	GAANNNNTTC	2 cut(s)	104, 2438
XspI	CTAG	3 cut(s)	1398, 1455, 1871
ZrmI	AGTACT	1 cut(s)	259
Zsp2I	ATGCAT	1 cut(s)	2440

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.