Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000388.1

Orthogroup ID

OG0006171

Physical Location & Seq

Genomic Coordinates Forward (+)

296990 .. 300475

Gene Structure 3486 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000388.1_g000061.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2832 bp

atgacaaatataaatgtggaaacgaaggtagcagtaaatgtggccacgatggatatggttcttagtgactctgattgggacagttacagtgagactggtagcaatgaggatcaagagggaaacgaatatttctatggtgggcatgccagcagcctattgtctagcctcgaggctagcattgggaaaattgatgactttctctcattcgagaggggatttatatatggggacatagtaagctccgtaagagatccatctggacagatgggaaaagttgttggcattaagatgtctgttgatttggagagtgtgaatggaaatatgatcaaaaatgtaaactcgaagaatctgtcaaagatccgtcccatttcggtgggggattatgttgtttgtgggccttggcttggaagggtggatagagtagttgactgtgtagcggttgtctttgacgatggcacagagtgtgtggtgactgctgtggatccagagaagctcgtacccgtctccccaaacatacttgaagacccacagtacccatattatccaggacagagagtaaaggttaggctctcaactgtttccaaatcaactagatggttttgtggtaactggagggaaaatcaagatgaaggaactgtttgttctttggaaggaggtttaatgtatgttgattggcttgcctctgttctcgtaggttgtggttcgaattttcctgctcctccacatctgctggattcaaagaaattgactttggtatcatgtttctctcatgccaattggcagcttggtgactggtgtatgcttgcaattgctgagtgtaaaggtttttcggagcaggcttttcatagaacttctacttgtgagctcactaacaagcaaaacaattcagaaagaggatttaagagaagaaatcctaagtcaaaaattgaggaaatctttgtaatctcaaagacaaagaccaaagttgatgttctgtggcaagatggtagccagtctttggaagtggattcacagacattagttccggtcagtgttgtaaatgatcatgaattttggcctgaacagtttgtccttgaaaagggaacttatgatgatccaaacttgtttagcagccaaaggtggggtgttgtgcgtggtgtggatgcaaaggaacgaacagtaaaggtgcaatggaaaactataactgcacccgaaacaaataatttagagggagagcagatggaggaagttgtaagtgcttatgaacttgttgagcacccggattactcctactgttttggagattatgtgttcaggatggtccagaatcagtttgatgaacaagctgataaaaactatccgaacacaaggtctgacacgactgaggaggtagctccggaagagaaggacttcagtggggatcaagatgacttcacagataaaagttacctaccttgcattggcaatgttttgggcttcatagatggtgctttagaagtgagatgggcaactggtattacaagcaaggtggccccatgtgaaattttccggtttgataaacatgaaggttcagctgcaatccccgcagaagatgacactgaggaattgaacaaagagataattcaacatgaaaaacaacctaataacgaagaaggaaaggattccttgaatttagatgatgctgctaaaagttgtaaaccgtacacaagcgagtctagttcctatttccttcctcaagctgccattggatttttctcgagcatcgctgttagtctctttggatcccatagctacacatcactttcaggtccttccccgtcagtctgtacttctgaagttggaaaggaatccgggatctcccatgagaaaggaatagtagaaactcgtgatgtctgtgctgagccacattcaacgtctgagtctgacattattggcaatgaaaatttgaatcatgaaggcgaagacattgaggggaacagatatcttccatgtttgaaagacaaagagagtgcagatcagttcaggcaatttgacatgcttgctgattgtgcagatcaccattttcatagtgccaggaaggagttggcattatctcaggtaaaaagaggttggatgaagaaggttcagcaagagtggagcatcttagagaaagatcttcctgaacaaatctatgtccgtgcgtttgaggaaaggatggatctactgcgggcagccattgttggtacaccaggaactccatatcatgatgggcttttcttctttgacatttatcttccaccagagtatcctcatgagccacctatggtacactacatttctggtgggctacgtgtgaacccgaacttgtatgagtctggaaaggtctgtctcagtctgcttaacacgtggactggtacgggcagtgaagtttggaatcctgggagctccaccattcttcaagttcttctctcccttcaggcccttgtgcttaatgacaggccatatttcaatgaagctggatatgatcagcaggtgggaagaactgagggagagaaaaactcagtgagctataatgaaaatgcattccttatgacttgcaagtccatgctgttttctctccaaaagccgcctaagcattttgaggggcttgtgatggaacacttcactcagcgctctgaaaatattctaatgtcttgtaaggcatatatggagggggttccaatagggtgtgctgttgattttcagaaaaccgatgataaagagggaagctctactgggttcaaaattatgcttgctaagctgtttcagaaactagtggaggcattttctgctaagggaatcgactgcagccagttcatcgcgccagggaaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0006464 GO:0006807 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0010966 GO:0012505 GO:0015698 GO:0016036 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0030163 GO:0031625 GO:0031667 GO:0031668 GO:0031669 GO:0032446 GO:0032879 GO:0033554 GO:0034762 GO:0034765 GO:0036211 GO:0042592 GO:0042594 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043412 GO:0044070 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0048878 GO:0050789 GO:0050801 GO:0050896 GO:0051049 GO:0051179 GO:0051234 GO:0051716 GO:0055062 GO:0055081 GO:0055083 GO:0061630 GO:0061659 GO:0065007 GO:0065008 GO:0070647 GO:0071496 GO:0071704 GO:0072505 GO:0072506 GO:0098771 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1903795 GO:1903959 GO:2000185

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

943

Amino Acids

105.34

Weight (kDa)

4.78

Isoelectric Point (pI)

37.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006171)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33770
fragaria_vesca	FvH4_3g09200 FvH4_3g29950
malus_domestica	MD05G1312700.v1.1 MD10G1294500.v1.1
prunus_persica	Prupe.4G047400_v2.0.a1 Prupe.4G047400_v2.0.a1
pyrus_communis	pycom05g29070 pycom05g29080 pycom10g24620 pycom10g24630 pycom10g24640
rosa_chinensis	RchiOBHm_Chr5g0008401
rosa_laevigata	RLG00000031568
rosa_multiflora	Rmu_co8007308.1_g000001 Rmu_co8292313.1_g000001 Rmu_sc0004326.1_g000003 Rmu_sc0028200.1_g000001 Rmu_ssc0000388.1_g000061
rosa_roxburghii	Rroxscaffold_1G00068090
rosa_rugosa	Rorug04G0435600
rosa_samantha	Rh5AG064200 Rh5BG061400 Rh5CG071300 Rh5DG060200 Rh5DG060300
rosa_wichuraiana	Rw5G005660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2479
AasI	GACNNNNNNGTC	1 cut(s)	2557
AbsI	CCTCGAGG	1 cut(s)	167
Acc36I	ACCTGC	1 cut(s)	2479
AccB7I	CCANNNNNTGG	1 cut(s)	997
AccII	CGCG	1 cut(s)	2819
AccIII	TCCGGA	1 cut(s)	1375
AciI	CCGC	4 cut(s)	437, 1563, 2185, 2585
AcoI	YGGCCR	1 cut(s)	42
AcsI	RAATTY	5 cut(s)	706, 1049, 1521, 1648, 1921
AcuI	CTGAAG	3 cut(s)	1375, 1833, 2417
AcvI	CACGTG	1 cut(s)	2364
AdeI	CACNNNGTG	1 cut(s)	462
AfaI	GTAC	7 cut(s)	498, 533, 1682, 1807, 2203, 2286, 2374
AfeI	AGCGCT	1 cut(s)	2630
AfiI	CCNNNNNNNGG	5 cut(s)	404, 997, 1078, 1120, 1439
AflIII	ACRYGT	2 cut(s)	2308, 2361
AhlI	ACTAGT	1 cut(s)	2770
AjnI	CCWGG	5 cut(s)	544, 2051, 2206, 2395, 2821
AjuI	GAANNNNNNNTTGG	2 cut(s)	734, 766
AloI	GAACNNNNNNTCC	2 cut(s)	1053, 1085
Alw21I	GWGCWC	3 cut(s)	867, 1257, 2405
Alw26I	GTCTC	4 cut(s)	86, 508, 1757, 2351
Ama87I	CYCGRG	2 cut(s)	167, 1735
Aor13HI	TCCGGA	1 cut(s)	1375
Aor51HI	AGCGCT	1 cut(s)	2630
AoxI	GGCC	6 cut(s)	42, 395, 1055, 1509, 2436, 2456
ApeKI	GCWGC	8 cut(s)	150, 781, 1110, 1553, 1661, 1718, 2189, 2805
ApoI	RAATTY	5 cut(s)	706, 1049, 1521, 1648, 1921
ArsI	GACNNNNNNTTYG	4 cut(s)	335, 367, 1334, 1366
Asp700I	GAANNNNTTC	3 cut(s)	1388, 1639, 2640
AspLEI	GCGC	2 cut(s)	2631, 2821
AspS9I	GGNCC	5 cut(s)	395, 1300, 1510, 1787, 2437
AsuC2I	CCSGG	2 cut(s)	1259, 1831
AsuHPI	GGTGA	3 cut(s)	481, 800, 2027
AsuII	TTCGAA	1 cut(s)	704
AsuNHI	GCTAGC	1 cut(s)	173
AvaI	CYCGRG	2 cut(s)	167, 1735
AvaII	GGWCC	2 cut(s)	1300, 1787
BaeI	ACNNNNGTAYC	4 cut(s)	738, 771, 2246, 2279
BalI	TGGCCA	1 cut(s)	44
BamHI	GGATCC	2 cut(s)	481, 1760
BanII	GRGCYC	2 cut(s)	867, 2405
BauI	CACGAG	1 cut(s)	1863
BbrPI	CACGTG	1 cut(s)	2364
BbsI	GAAGAC	2 cut(s)	528, 1947
Bbv12I	GWGCWC	3 cut(s)	867, 1257, 2405
BbvI	GCAGC	8 cut(s)	162, 793, 1122, 1540, 1648, 1705, 2201, 2817
BciT130I	CCWGG	5 cut(s)	546, 2053, 2208, 2397, 2823
BciVI	GTATCC	1 cut(s)	2274
BclI	TGATCA	3 cut(s)	324, 1042, 2482
BcnI	CCSGG	2 cut(s)	1259, 1831
BcoDI	GTCTC	4 cut(s)	86, 508, 1757, 2351
BcuI	ACTAGT	1 cut(s)	2770
BfaI	CTAG	5 cut(s)	162, 174, 591, 1695, 2771
BfmI	CTRYAG	1 cut(s)	2803
BfoI	RGCGCY	1 cut(s)	2632
BfuAI	ACCTGC	1 cut(s)	2479
BfuI	GTATCC	1 cut(s)	2274
BglII	AGATCT	1 cut(s)	2131
BisI	GCNGC	9 cut(s)	151, 782, 1111, 1554, 1662, 1719, 2190, 2585, 2806
BlpI	GCTNAGC	2 cut(s)	1878, 2754
BlsI	GCNGC	9 cut(s)	152, 783, 1112, 1555, 1663, 1720, 2191, 2586, 2807
Bme1390I	CCNGG	7 cut(s)	546, 1259, 1831, 2053, 2208, 2397, 2823
Bme18I	GGWCC	2 cut(s)	1300, 1787
BmeT110I	CYCGRG	2 cut(s)	167, 1735
BmgT120I	GGNCC	5 cut(s)	395, 1300, 1510, 1787, 2437
BmiI	GGNNCC	4 cut(s)	483, 1512, 1762, 2676
BmrFI	CCNGG	7 cut(s)	546, 1259, 1831, 2053, 2208, 2397, 2823
BmrI	ACTGGG	1 cut(s)	2742
BmsI	GCATC	4 cut(s)	1132, 1648, 1749, 2127
BmtI	GCTAGC	1 cut(s)	177
BmuI	ACTGGG	1 cut(s)	2742
BpiI	GAAGAC	2 cut(s)	528, 1947
BplI	GAGNNNNNCTC	4 cut(s)	2501, 2533, 2711, 2743
BpmI	CTGGAG	1 cut(s)	631
Bpu10I	CCTNAGC	2 cut(s)	2589, 2790
Bpu1102I	GCTNAGC	2 cut(s)	1878, 2754
Bpu14I	TTCGAA	1 cut(s)	704
BpuEI	CTTGAG	1 cut(s)	1698
BpuMI	CCSGG	2 cut(s)	1259, 1831
BsaAI	YACGTR	2 cut(s)	2309, 2364
BsaJI	CCNNGG	3 cut(s)	398, 2396, 2822
BsaWI	WCCGGW	3 cut(s)	1024, 1375, 1527
BsaXI	ACNNNNNCTCC	2 cut(s)	1272, 1302
Bsc4I	CCNNNNNNNGG	5 cut(s)	404, 997, 1078, 1120, 1439
Bse1I	ACTGG	8 cut(s)	100, 614, 797, 991, 1495, 2374, 2737, 2809
Bse3DI	GCAATG	4 cut(s)	109, 1175, 1450, 1921
BseAI	TCCGGA	1 cut(s)	1375
BseBI	CCWGG	5 cut(s)	546, 2053, 2208, 2397, 2823
BseDI	CCNNGG	3 cut(s)	398, 2396, 2822
BseGI	GGATG	4 cut(s)	1147, 1302, 2097, 2178
BseLI	CCNNNNNNNGG	5 cut(s)	404, 997, 1078, 1120, 1439
BseMI	GCAATG	4 cut(s)	109, 1175, 1450, 1921
BseNI	ACTGG	8 cut(s)	100, 614, 797, 991, 1495, 2374, 2737, 2809
BseRI	GAGGAG	2 cut(s)	708, 1379
BseXI	GCAGC	8 cut(s)	162, 793, 1122, 1540, 1648, 1705, 2201, 2817
BsgI	GTGCAG	3 cut(s)	1170, 2010, 2049
Bsh1236I	CGCG	1 cut(s)	2819
BshFI	GGCC	6 cut(s)	44, 397, 1057, 1511, 2438, 2458
BsiHKAI	GWGCWC	3 cut(s)	867, 1257, 2405
BsiHKCI	CYCGRG	2 cut(s)	167, 1735
BsiSI	CCGG	5 cut(s)	1025, 1259, 1376, 1528, 1830
BslFI	GGGAC	3 cut(s)	92, 242, 348
BslI	CCNNNNNNNGG	5 cut(s)	404, 997, 1078, 1120, 1439
BsmAI	GTCTC	4 cut(s)	86, 508, 1757, 2351
BsmBI	CGTCTC	1 cut(s)	508
BsmFI	GGGAC	3 cut(s)	92, 242, 348
BsmI	GAATGC	1 cut(s)	2540
BsnI	GGCC	6 cut(s)	44, 397, 1057, 1511, 2438, 2458
BsoBI	CYCGRG	2 cut(s)	167, 1735
Bsp119I	TTCGAA	1 cut(s)	704
Bsp1286I	GDGCHC	3 cut(s)	867, 1257, 2405
Bsp13I	TCCGGA	1 cut(s)	1375
Bsp1720I	GCTNAGC	2 cut(s)	1878, 2754
BspACI	CCGC	4 cut(s)	437, 1563, 2185, 2585
BspANI	GGCC	6 cut(s)	44, 397, 1057, 1511, 2438, 2458
BspEI	TCCGGA	1 cut(s)	1375
BspFNI	CGCG	1 cut(s)	2819
BspHI	TCATGA	4 cut(s)	1045, 1930, 2221, 2269
BspLI	GGNNCC	4 cut(s)	483, 1512, 1762, 2676
BspMAI	CTGCAG	1 cut(s)	2807
BspMI	ACCTGC	1 cut(s)	2479
BspOI	GCTAGC	1 cut(s)	177
BspT104I	TTCGAA	1 cut(s)	704
BsrDI	GCAATG	4 cut(s)	109, 1175, 1450, 1921
BsrI	ACTGG	8 cut(s)	100, 614, 797, 991, 1495, 2374, 2737, 2809
BssECI	CCNNGG	3 cut(s)	398, 2396, 2822
BssSI	CACGAG	1 cut(s)	1863
BssT1I	CCWWGG	1 cut(s)	398
Bst2BI	CACGAG	1 cut(s)	1863
Bst2UI	CCWGG	5 cut(s)	546, 2053, 2208, 2397, 2823
Bst6I	CTCTTC	1 cut(s)	1374
BstAPI	GCANNNNNTGC	1 cut(s)	2786
BstBAI	YACGTR	2 cut(s)	2309, 2364
BstBI	TTCGAA	1 cut(s)	704
BstC8I	GCNNGC	9 cut(s)	144, 148, 175, 678, 804, 837, 2019, 2187, 2751
BstENI	CCTNNNNNAGG	1 cut(s)	1076
BstF5I	GGATG	4 cut(s)	1147, 1302, 2097, 2178
BstFNI	CGCG	1 cut(s)	2819
BstH2I	RGCGCY	1 cut(s)	2632
BstHHI	GCGC	2 cut(s)	2631, 2821
BstMAI	GTCTC	4 cut(s)	86, 508, 1757, 2351
BstMWI	GCNNNNNNNGC	5 cut(s)	1562, 2027, 2590, 2755, 2786
BstNI	CCWGG	5 cut(s)	546, 2053, 2208, 2397, 2823
BstNSI	RCATGY	2 cut(s)	146, 2017
BstSCI	CCNGG	7 cut(s)	544, 1257, 1829, 2051, 2206, 2395, 2821
BstSFI	CTRYAG	1 cut(s)	2803
BstUI	CGCG	1 cut(s)	2819
BstV1I	GCAGC	8 cut(s)	162, 793, 1122, 1540, 1648, 1705, 2201, 2817
BstV2I	GAAGAC	2 cut(s)	528, 1947
BstX2I	RGATCY	7 cut(s)	250, 357, 481, 1760, 1833, 2131, 2176
BstXI	CCANNNNNNTGG	1 cut(s)	373
BstYI	RGATCY	7 cut(s)	250, 357, 481, 1760, 1833, 2131, 2176
BsuI	GTATCC	1 cut(s)	2274
BsuRI	GGCC	6 cut(s)	44, 397, 1057, 1511, 2438, 2458
BtgZI	GCGATG	2 cut(s)	1726, 2800
BtsCI	GGATG	4 cut(s)	1147, 1302, 2097, 2178
BtsI	GCAGTG	1 cut(s)	2386
BtsIMutI	CAGTG	6 cut(s)	94, 1036, 1399, 1575, 2386, 2526
BveI	ACCTGC	1 cut(s)	2479
Cac8I	GCNNGC	9 cut(s)	144, 148, 175, 678, 804, 837, 2019, 2187, 2751
CciI	TCATGA	4 cut(s)	1045, 1930, 2221, 2269
CfoI	GCGC	2 cut(s)	2631, 2821
Cfr13I	GGNCC	5 cut(s)	395, 1300, 1510, 1787, 2437
Csp6I	GTAC	7 cut(s)	497, 532, 1681, 1806, 2202, 2285, 2373
CspCI	CAANNNNNGTGG	2 cut(s)	1488, 1523
CviQI	GTAC	7 cut(s)	497, 532, 1681, 1806, 2202, 2285, 2373
DraIII	CACNNNGTG	1 cut(s)	462
DrdI	GACNNNNNNGTC	1 cut(s)	2557
DseDI	GACNNNNNNGTC	1 cut(s)	2557
EaeI	YGGCCR	1 cut(s)	42
Eam1104I	CTCTTC	1 cut(s)	1374
EarI	CTCTTC	1 cut(s)	1374
Ecl136II	GAGCTC	2 cut(s)	865, 2403
Eco130I	CCWWGG	1 cut(s)	398
Eco24I	GRGCYC	2 cut(s)	867, 2405
Eco32I	GATATC	1 cut(s)	1961
Eco47I	GGWCC	2 cut(s)	1300, 1787
Eco47III	AGCGCT	1 cut(s)	2630
Eco53kI	GAGCTC	2 cut(s)	865, 2403
Eco57I	CTGAAG	3 cut(s)	1375, 1833, 2417
Eco72I	CACGTG	1 cut(s)	2364
Eco88I	CYCGRG	2 cut(s)	167, 1735
EcoICRI	GAGCTC	2 cut(s)	865, 2403
EcoNI	CCTNNNNNAGG	1 cut(s)	1076
EcoO109I	RGGNCCY	2 cut(s)	1787, 2437
EcoRII	CCWGG	5 cut(s)	544, 2051, 2206, 2395, 2821
EcoRV	GATATC	1 cut(s)	1961
EcoT14I	CCWWGG	1 cut(s)	398
EcoT22I	ATGCAT	1 cut(s)	2542
EcoT38I	GRGCYC	2 cut(s)	867, 2405
ErhI	CCWWGG	1 cut(s)	398
Esp3I	CGTCTC	1 cut(s)	508
FalI	AAGNNNNNCTT	2 cut(s)	1628, 1660
FaqI	GGGAC	3 cut(s)	92, 242, 348
FauI	CCCGC	2 cut(s)	1570, 2178
FbaI	TGATCA	3 cut(s)	324, 1042, 2482
Fnu4HI	GCNGC	9 cut(s)	151, 782, 1111, 1554, 1662, 1719, 2190, 2585, 2806
FokI	GGATG	4 cut(s)	1154, 1309, 2104, 2185
FriOI	GRGCYC	2 cut(s)	867, 2405
Fsp4HI	GCNGC	9 cut(s)	151, 782, 1111, 1554, 1662, 1719, 2190, 2585, 2806
FspBI	CTAG	5 cut(s)	162, 174, 591, 1695, 2771
GlaI	GCGC	2 cut(s)	2630, 2820
GluI	GCNGC	9 cut(s)	151, 782, 1111, 1554, 1662, 1719, 2190, 2585, 2806
GsuI	CTGGAG	1 cut(s)	631
HaeII	RGCGCY	1 cut(s)	2632
HaeIII	GGCC	6 cut(s)	44, 397, 1057, 1511, 2438, 2458
HapII	CCGG	5 cut(s)	1025, 1259, 1376, 1528, 1830
HhaI	GCGC	2 cut(s)	2631, 2821
Hin6I	GCGC	2 cut(s)	2629, 2819
HinP1I	GCGC	2 cut(s)	2629, 2819
HincII	GTYRAC	1 cut(s)	427
HindII	GTYRAC	1 cut(s)	427
HpaII	CCGG	5 cut(s)	1025, 1259, 1376, 1528, 1830
HphI	GGTGA	3 cut(s)	481, 800, 2027
Hpy166II	GTNNAC	8 cut(s)	337, 427, 1676, 1683, 2204, 2287, 2314, 2367
Hpy8I	GTNNAC	8 cut(s)	337, 427, 1676, 1683, 2204, 2287, 2314, 2367
HpyCH4IV	ACGT	3 cut(s)	1892, 2308, 2363
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1562, 2027, 2590, 2755, 2786
HpySE526I	ACGT	3 cut(s)	1892, 2308, 2363
HspAI	GCGC	2 cut(s)	2629, 2819
Kpn2I	TCCGGA	1 cut(s)	1375
Ksp22I	TGATCA	3 cut(s)	324, 1042, 2482
LmnI	GCTCC	7 cut(s)	245, 721, 832, 1378, 2115, 2400, 2408
Lsp1109I	GCAGC	8 cut(s)	162, 793, 1122, 1540, 1648, 1705, 2201, 2817
LweI	GCATC	4 cut(s)	1132, 1648, 1749, 2127
MaeI	CTAG	5 cut(s)	162, 174, 591, 1695, 2771
MaeII	ACGT	3 cut(s)	1892, 2308, 2363
MaeIII	GTNAC	6 cut(s)	65, 83, 469, 605, 788, 1424
MfeI	CAATTG	2 cut(s)	775, 807
MflI	RGATCY	7 cut(s)	250, 357, 481, 1760, 1833, 2131, 2176
MhlI	GDGCHC	3 cut(s)	867, 1257, 2405
MlsI	TGGCCA	1 cut(s)	44
MluNI	TGGCCA	1 cut(s)	44
MlyI	GAGTC	4 cut(s)	62, 1700, 1907, 2339
MmeI	TCCRAC	2 cut(s)	1798, 2069
Mox20I	TGGCCA	1 cut(s)	44
Mph1103I	ATGCAT	1 cut(s)	2542
MroI	TCCGGA	1 cut(s)	1375
MroXI	GAANNNNTTC	3 cut(s)	1388, 1639, 2640
MscI	TGGCCA	1 cut(s)	44
MseI	TTAA	5 cut(s)	285, 659, 900, 2358, 2448
MslI	CAYNNNNRTG	2 cut(s)	287, 371
Msp20I	TGGCCA	1 cut(s)	44
MspA1I	CMGCKG	1 cut(s)	1553
MspI	CCGG	5 cut(s)	1025, 1259, 1376, 1528, 1830
MspR9I	CCNGG	7 cut(s)	546, 1259, 1831, 2053, 2208, 2397, 2823
MunI	CAATTG	2 cut(s)	775, 807
Mva1269I	GAATGC	1 cut(s)	2540
MvaI	CCWGG	5 cut(s)	546, 2053, 2208, 2397, 2823
MvnI	CGCG	1 cut(s)	2819
MwoI	GCNNNNNNNGC	5 cut(s)	1562, 2027, 2590, 2755, 2786
NciI	CCSGG	2 cut(s)	1259, 1831
NheI	GCTAGC	1 cut(s)	173
NlaIV	GGNNCC	4 cut(s)	483, 1512, 1762, 2676
NmuCI	GTSAC	3 cut(s)	65, 469, 788
NsiI	ATGCAT	1 cut(s)	2542
NspI	RCATGY	2 cut(s)	146, 2017
NspV	TTCGAA	1 cut(s)	704
PaeI	GCATGC	1 cut(s)	146
PaeR7I	CTCGAG	2 cut(s)	167, 1735
PagI	TCATGA	4 cut(s)	1045, 1930, 2221, 2269
PaqCI	CACCTGC	1 cut(s)	2479
PctI	GAATGC	1 cut(s)	2540
PdmI	GAANNNNTTC	3 cut(s)	1388, 1639, 2640
PfeI	GAWTC	9 cut(s)	346, 734, 1007, 1306, 1640, 1826, 1927, 2392, 2796
PflMI	CCANNNNNTGG	1 cut(s)	997
PfoI	TCCNGGA	2 cut(s)	544, 1829
PkrI	GCNGC	9 cut(s)	152, 783, 1112, 1555, 1663, 1720, 2191, 2586, 2807
PleI	GAGTC	4 cut(s)	62, 1699, 1906, 2338
PmaCI	CACGTG	1 cut(s)	2364
PmlI	CACGTG	1 cut(s)	2364
PpsI	GAGTC	4 cut(s)	62, 1699, 1906, 2338
Ppu21I	YACGTR	2 cut(s)	2309, 2364
PpuMI	RGGWCCY	1 cut(s)	1787
Psp124BI	GAGCTC	2 cut(s)	867, 2405
Psp5II	RGGWCCY	1 cut(s)	1787
Psp6I	CCWGG	5 cut(s)	544, 2051, 2206, 2395, 2821
PspCI	CACGTG	1 cut(s)	2364
PspGI	CCWGG	5 cut(s)	544, 2051, 2206, 2395, 2821
PspN4I	GGNNCC	4 cut(s)	483, 1512, 1762, 2676
PspPI	GGNCC	5 cut(s)	395, 1300, 1510, 1787, 2437
PspPPI	RGGWCCY	1 cut(s)	1787
PspXI	VCTCGAGB	1 cut(s)	167
PstI	CTGCAG	1 cut(s)	2807
PsuI	RGATCY	7 cut(s)	250, 357, 481, 1760, 1833, 2131, 2176
PvuII	CAGCTG	1 cut(s)	1553
RsaI	GTAC	7 cut(s)	498, 533, 1682, 1807, 2203, 2286, 2374
RsaNI	GTAC	7 cut(s)	497, 532, 1681, 1806, 2202, 2285, 2373
RseI	CAYNNNNRTG	2 cut(s)	287, 371
SacI	GAGCTC	2 cut(s)	867, 2405
SaqAI	TTAA	5 cut(s)	285, 659, 900, 2358, 2448
SatI	GCNGC	9 cut(s)	151, 782, 1111, 1554, 1662, 1719, 2190, 2585, 2806
Sau96I	GGNCC	5 cut(s)	395, 1300, 1510, 1787, 2437
SchI	GAGTC	4 cut(s)	62, 1700, 1907, 2339
ScrFI	CCNGG	7 cut(s)	546, 1259, 1831, 2053, 2208, 2397, 2823
SduI	GDGCHC	3 cut(s)	867, 1257, 2405
SfaNI	GCATC	4 cut(s)	1132, 1648, 1749, 2127
SfcI	CTRYAG	1 cut(s)	2803
Sfr274I	CTCGAG	2 cut(s)	167, 1735
SfuI	TTCGAA	1 cut(s)	704
SinI	GGWCC	2 cut(s)	1300, 1787
SlaI	CTCGAG	2 cut(s)	167, 1735
SmiMI	CAYNNNNRTG	2 cut(s)	287, 371
SmlI	CTYRAG	3 cut(s)	167, 1713, 1735
SmoI	CTYRAG	3 cut(s)	167, 1713, 1735
SpeI	ACTAGT	1 cut(s)	2770
SphI	GCATGC	1 cut(s)	146
SsiI	CCGC	4 cut(s)	437, 1563, 2185, 2585
SspI	AATATT	2 cut(s)	128, 2641
SspMI	CTAG	5 cut(s)	162, 174, 591, 1695, 2771
SstI	GAGCTC	2 cut(s)	867, 2405
StyD4I	CCNGG	7 cut(s)	544, 1257, 1829, 2051, 2206, 2395, 2821
StyI	CCWWGG	1 cut(s)	398
TaiI	ACGT	3 cut(s)	1895, 2311, 2366
TaqI	TCGA	6 cut(s)	168, 207, 341, 704, 1736, 2799
TatI	WGTACW	1 cut(s)	1805
TauI	GCSGC	1 cut(s)	2587
TfiI	GAWTC	9 cut(s)	346, 734, 1007, 1306, 1640, 1826, 1927, 2392, 2796
Tru1I	TTAA	5 cut(s)	285, 659, 900, 2358, 2448
Tru9I	TTAA	5 cut(s)	285, 659, 900, 2358, 2448
TscAI	CASTG	6 cut(s)	94, 1036, 1399, 1582, 2386, 2526
TseFI	GTSAC	3 cut(s)	65, 469, 788
TseI	GCWGC	8 cut(s)	150, 781, 1110, 1553, 1661, 1718, 2189, 2805
Tsp45I	GTSAC	3 cut(s)	65, 469, 788
TspGWI	ACGGA	3 cut(s)	232, 350, 2144
TspRI	CASTG	6 cut(s)	94, 1036, 1399, 1582, 2386, 2526
Van91I	CCANNNNNTGG	1 cut(s)	997
VpaK11BI	GGWCC	2 cut(s)	1300, 1787
XagI	CCTNNNNNAGG	1 cut(s)	1076
XapI	RAATTY	5 cut(s)	706, 1049, 1521, 1648, 1921
XceI	RCATGY	2 cut(s)	146, 2017
XcmI	CCANNNNNNNNNTGG	2 cut(s)	52, 2059
XhoI	CTCGAG	2 cut(s)	167, 1735
XmnI	GAANNNNTTC	3 cut(s)	1388, 1639, 2640
XspI	CTAG	5 cut(s)	162, 174, 591, 1695, 2771
Zsp2I	ATGCAT	1 cut(s)	2542

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.