Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0006171

Physical Location & Seq

Genomic Coordinates Reverse (-)

5072912 .. 5075309

Gene Structure 2398 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG060300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGATATGGTTCTTAGTGACTCTGATTGGGACAGTTACAGTGAGACTGGTAGCAATGAGGATCAAGAGGGAAACGAATATTTCTATGGTGGGCATGCCAGCAGCCTATTGTCTAGCCTCGAGGCTAGCATTGGGAAAATTGATGACTTTCTCTCATTCGAGAGGGGATTTATATATGGGGACATAATAAGCTCCGTAAGAGATCCATCTGGACAGATGGGAAAAGTTGTTGGCATTAAGATGTCTGTTGATTTGGAGAGTGTGAATGGAAATATTATCAAAAATGTAAACTCGAAGAATCTGTCAAAGATCCGTCCCATTTCAGTGGGGGATTATGTTGTTTGTGGGCCTTGGCTTGGAAGGGTGGATAGAGTAGTTGACTGTGTAGCGGTTGTCTTTGACGATGGCACAGAGTGTGTGGTGACTGCTGTGGATCCAGAGAAGCTCGTACCCGTCTCCCCAAACATACTTGAAGACCCACAGTACCCATATTATCCAGGACAGAGAGTAAAGGTTAGGCTCTCAACTGTTTCCAAATCAACTAGATGGTTTTGTGGTAACTGGAGGGAAAATCAAGATGAAGGAACTGTTTGTTCTTTGGAAGGAGGTTTAATGTATGTTGATTGGCTTGCCTCTGTTCTCGTAGGTTGTGGTTCGAATTTTCCTGCTCCTCCACATCTGCTGGATTCAAAGAAATTGACTTTGGTATCATGTTTCTCTCATGCCAATTGGCAGCTTGGTGACTGGTGTATGCTTGCAATTGCTGAGTGTAAAGGTTTTTCGGAGCAGGCTTTTCATAGAACTTCTACTTGTGAGCTCACTAACAAGCAAAACAATTCAGAAAGAGGATTTAAGAGAAGAAATCCTAAGTCAAAAATTGAGGAAATCTTTGTAATCTCAAAGACAAAGACCAAAGTTGATGTTCTGTGGCAAGATGGTAGCCAGTCTTTGGAAGTGGATTCACAGACATTAGTTCCGGTCAGTGTTGTAAATGATCATGAATTTTGGCCTGAACAGTTTGTCCTTGAAAAGGGAACTTATGATGATCCAAACTTGTTTAGCAGCCAAAGGTGGGGTGTTGTGCGTGGTGTGGATGCAAAGGAACGAACAGTAAAGGTGCAATGGAAAACTATAACTGCACCCGAAACAAATAATTTAGAGGGAGAGCAGATGGAGGAAGTTGTAAGTGCTTATGAACTTGTTGAGCACCCAGATTACTCCTACTGTTTTGGAGATTATGTGTTCAGGATGGTCCAGAATCAGTTTGATGAACAAGCTGATAAAAACTATCCGAACACAAGGTCTGACATGACTGAGGAGGTAGCTCCGGAAGAGAAGAACTTCAGTGGGGATCAAGATGACTTCACAGATAAAAGTTACCTACCTTGCATTGGCAATGTTTTGGGCTTCATAGATGGTGCTTTAGAAGTGAGATGGGCAACTGGTATTGCAAGCAAGGTGGCCCCATGTGAAATTTTCCGGTTTGATAAACATGAAGGTTCAGCTGCAATCCCCGTAGAAGATGACACTGAGGAATTGAACAAAGAGATAATTCAACATGAAAAACAACCTAATAACGAAGAAGGAAAGGATTCCTTGAATTTAGATGATGCTGCTAAAAGTTGTAAACCGTACACAAGCGAGTCTAGTTCCTATTTCCTTCCTCAAGCTGCCATTGGATTTTTCTCGAGCATCGCTGTGAGTCTCTTTGGATCCCATAGTTACACATCACTTTCAGGTCCTTCCCCATCAGTCTGTACTTCTGCAGTTGGAAAGGAATCCGGGATCTCCTATGAGAAAGGAATAGTAGAAACTCGTGATGTCTGCGCTGAGCCACATTCAACGTCTGAGTCTGACATTATTGGCAATGAAAATTTGAATCATGAAGGCGAAGACATTGAGGGGAACAGATATCTTCCATGTTTGAAAGACAAAGAGAGTGCAGATCAGTTCAGGCAATTTGACATGCTTGCTGATTGTGCAGATCACCATTTTCATAGTGCCAGGAAGGAGTTGGCATTATCTCAGGTAAAAAGAGGTTGGATGAAGAAGGTTCAGCAAGAGTGGAGCATCTTAGAGAAAGATCTTCCTGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0006464 GO:0006807 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0010966 GO:0012505 GO:0015698 GO:0016036 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0030163 GO:0031625 GO:0031667 GO:0031668 GO:0031669 GO:0032446 GO:0032879 GO:0033554 GO:0034762 GO:0034765 GO:0036211 GO:0042592 GO:0042594 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043412 GO:0044070 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0048878 GO:0050789 GO:0050801 GO:0050896 GO:0051049 GO:0051179 GO:0051234 GO:0051716 GO:0055062 GO:0055081 GO:0055083 GO:0061630 GO:0061659 GO:0065007 GO:0065008 GO:0070647 GO:0071496 GO:0071704 GO:0072505 GO:0072506 GO:0098771 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1903795 GO:1903959 GO:2000185

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

698

Amino Acids

77.96

Weight (kDa)

4.67

Isoelectric Point (pI)

38.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tSH3-B_UBE2O	PF23046	109 - 241	2.5e-40	UBE2O, tandem tSH3-B domain
SH3-B_UBE2O	PF23043	332 - 405	2.3e-18	UBE2O, SH3-B domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006171)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33770
fragaria_vesca	FvH4_3g09200 FvH4_3g29950
malus_domestica	MD05G1312700.v1.1 MD10G1294500.v1.1
prunus_persica	Prupe.4G047400_v2.0.a1 Prupe.4G047400_v2.0.a1
pyrus_communis	pycom05g29070 pycom05g29080 pycom10g24620 pycom10g24630 pycom10g24640
rosa_chinensis	RchiOBHm_Chr5g0008401
rosa_laevigata	RLG00000031568
rosa_multiflora	Rmu_co8007308.1_g000001 Rmu_co8292313.1_g000001 Rmu_sc0004326.1_g000003 Rmu_sc0028200.1_g000001 Rmu_ssc0000388.1_g000061
rosa_roxburghii	Rroxscaffold_1G00068090
rosa_rugosa	Rorug04G0435600
rosa_samantha	Rh5AG064200 Rh5BG061400 Rh5CG071300 Rh5DG060200 Rh5DG060300
rosa_wichuraiana	Rw5G005660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	119
AccB7I	CCANNNNNTGG	1 cut(s)	949
AccIII	TCCGGA	1 cut(s)	1327
AciI	CCGC	1 cut(s)	389
AcsI	RAATTY	5 cut(s)	658, 1001, 1473, 1600, 1873
AcuI	CTGAAG	1 cut(s)	1327
AdeI	CACNNNGTG	1 cut(s)	414
AfaI	GTAC	4 cut(s)	450, 485, 1634, 1759
AfiI	CCNNNNNNNGG	5 cut(s)	356, 949, 1030, 1072, 1391
AgsI	TTSAA	9 cut(s)	473, 690, 1028, 1540, 1556, 1600, 1842, 1879, 1927
AjnI	CCWGG	3 cut(s)	496, 2003, 2089
AjuI	GAANNNNNNNTTGG	2 cut(s)	686, 718
AloI	GAACNNNNNNTCC	2 cut(s)	1005, 1037
AluBI	AGCT	8 cut(s)	192, 445, 736, 817, 1277, 1325, 1505, 1670
AluI	AGCT	8 cut(s)	192, 445, 736, 817, 1277, 1325, 1505, 1670
Alw21I	GWGCWC	2 cut(s)	819, 1209
Alw26I	GTCTC	3 cut(s)	38, 460, 1709
Ama87I	CYCGRG	2 cut(s)	119, 1687
Aor13HI	TCCGGA	1 cut(s)	1327
AoxI	GGCC	3 cut(s)	347, 1007, 1461
ApeKI	GCWGC	6 cut(s)	102, 733, 1062, 1505, 1613, 1670
ApoI	RAATTY	5 cut(s)	658, 1001, 1473, 1600, 1873
ArsI	GACNNNNNNTTYG	4 cut(s)	287, 319, 1286, 1318
Asp700I	GAANNNNTTC	2 cut(s)	1340, 1591
AspLEI	GCGC	1 cut(s)	1829
AspS9I	GGNCC	4 cut(s)	347, 1252, 1462, 1739
AsuC2I	CCSGG	1 cut(s)	1783
AsuHPI	GGTGA	3 cut(s)	433, 752, 1979
AsuII	TTCGAA	1 cut(s)	656
AsuNHI	GCTAGC	1 cut(s)	125
AvaI	CYCGRG	2 cut(s)	119, 1687
AvaII	GGWCC	2 cut(s)	1252, 1739
BaeI	ACNNNNGTAYC	2 cut(s)	690, 723
BamHI	GGATCC	2 cut(s)	433, 1712
BanII	GRGCYC	1 cut(s)	819
BauI	CACGAG	1 cut(s)	1815
BbsI	GAAGAC	2 cut(s)	480, 1899
Bbv12I	GWGCWC	2 cut(s)	819, 1209
BbvI	GCAGC	6 cut(s)	114, 745, 1074, 1492, 1600, 1657
BciT130I	CCWGG	3 cut(s)	498, 2005, 2091
BclI	TGATCA	1 cut(s)	994
BcnI	CCSGG	1 cut(s)	1783
BcoDI	GTCTC	3 cut(s)	38, 460, 1709
BfaI	CTAG	4 cut(s)	114, 126, 543, 1647
BfmI	CTRYAG	1 cut(s)	1764
BglII	AGATCT	1 cut(s)	2083
BisI	GCNGC	6 cut(s)	103, 734, 1063, 1506, 1614, 1671
BlpI	GCTNAGC	1 cut(s)	1830
BlsI	GCNGC	6 cut(s)	104, 735, 1064, 1507, 1615, 1672
Bme1390I	CCNGG	4 cut(s)	498, 1783, 2005, 2091
Bme18I	GGWCC	2 cut(s)	1252, 1739
BmeT110I	CYCGRG	2 cut(s)	119, 1687
BmgT120I	GGNCC	4 cut(s)	347, 1252, 1462, 1739
BmiI	GGNNCC	3 cut(s)	435, 1464, 1714
BmrFI	CCNGG	4 cut(s)	498, 1783, 2005, 2091
BmsI	GCATC	4 cut(s)	1084, 1600, 1701, 2079
BmtI	GCTAGC	1 cut(s)	129
BpiI	GAAGAC	2 cut(s)	480, 1899
BpmI	CTGGAG	1 cut(s)	583
Bpu1102I	GCTNAGC	1 cut(s)	1830
Bpu14I	TTCGAA	1 cut(s)	656
BpuEI	CTTGAG	1 cut(s)	1650
BpuMI	CCSGG	1 cut(s)	1783
BsaJI	CCNNGG	1 cut(s)	350
BsaWI	WCCGGW	3 cut(s)	976, 1327, 1479
BsaXI	ACNNNNNCTCC	2 cut(s)	1224, 1254
Bsc4I	CCNNNNNNNGG	5 cut(s)	356, 949, 1030, 1072, 1391
Bse1I	ACTGG	5 cut(s)	52, 566, 749, 943, 1447
Bse3DI	GCAATG	4 cut(s)	61, 1127, 1402, 1873
BseAI	TCCGGA	1 cut(s)	1327
BseBI	CCWGG	3 cut(s)	498, 2005, 2091
BseDI	CCNNGG	1 cut(s)	350
BseGI	GGATG	3 cut(s)	1099, 1254, 2049
BseLI	CCNNNNNNNGG	5 cut(s)	356, 949, 1030, 1072, 1391
BseMI	GCAATG	4 cut(s)	61, 1127, 1402, 1873
BseMII	CTCAG	6 cut(s)	756, 1305, 1521, 1821, 1839, 2039
BseNI	ACTGG	5 cut(s)	52, 566, 749, 943, 1447
BseRI	GAGGAG	2 cut(s)	660, 1331
BseXI	GCAGC	6 cut(s)	114, 745, 1074, 1492, 1600, 1657
BsgI	GTGCAG	3 cut(s)	1122, 1962, 2001
BshFI	GGCC	3 cut(s)	349, 1009, 1463
BsiHKAI	GWGCWC	2 cut(s)	819, 1209
BsiHKCI	CYCGRG	2 cut(s)	119, 1687
BsiSI	CCGG	4 cut(s)	977, 1328, 1480, 1782
BslFI	GGGAC	3 cut(s)	44, 194, 300
BslI	CCNNNNNNNGG	5 cut(s)	356, 949, 1030, 1072, 1391
BsmAI	GTCTC	3 cut(s)	38, 460, 1709
BsmBI	CGTCTC	1 cut(s)	460
BsmFI	GGGAC	3 cut(s)	44, 194, 300
BsnI	GGCC	3 cut(s)	349, 1009, 1463
BsoBI	CYCGRG	2 cut(s)	119, 1687
Bsp119I	TTCGAA	1 cut(s)	656
Bsp1286I	GDGCHC	2 cut(s)	819, 1209
Bsp13I	TCCGGA	1 cut(s)	1327
Bsp1720I	GCTNAGC	1 cut(s)	1830
BspACI	CCGC	1 cut(s)	389
BspANI	GGCC	3 cut(s)	349, 1009, 1463
BspCNI	CTCAG	6 cut(s)	757, 1306, 1522, 1822, 1840, 2038
BspEI	TCCGGA	1 cut(s)	1327
BspHI	TCATGA	2 cut(s)	997, 1882
BspLI	GGNNCC	3 cut(s)	435, 1464, 1714
BspMAI	CTGCAG	1 cut(s)	1768
BspOI	GCTAGC	1 cut(s)	129
BspT104I	TTCGAA	1 cut(s)	656
BsrDI	GCAATG	4 cut(s)	61, 1127, 1402, 1873
BsrI	ACTGG	5 cut(s)	52, 566, 749, 943, 1447
BssECI	CCNNGG	1 cut(s)	350
BssSI	CACGAG	1 cut(s)	1815
BssT1I	CCWWGG	1 cut(s)	350
Bst2BI	CACGAG	1 cut(s)	1815
Bst2UI	CCWGG	3 cut(s)	498, 2005, 2091
Bst6I	CTCTTC	1 cut(s)	1326
BstBI	TTCGAA	1 cut(s)	656
BstC8I	GCNNGC	8 cut(s)	96, 100, 127, 630, 756, 789, 1453, 1971
BstDEI	CTNAG	9 cut(s)	14, 765, 867, 1314, 1530, 1830, 1848, 2025, 2074
BstENI	CCTNNNNNAGG	1 cut(s)	1028
BstF5I	GGATG	3 cut(s)	1099, 1254, 2049
BstHHI	GCGC	1 cut(s)	1829
BstMAI	GTCTC	3 cut(s)	38, 460, 1709
BstMWI	GCNNNNNNNGC	1 cut(s)	1979
BstNI	CCWGG	3 cut(s)	498, 2005, 2091
BstNSI	RCATGY	2 cut(s)	98, 1969
BstSCI	CCNGG	4 cut(s)	496, 1781, 2003, 2089
BstSFI	CTRYAG	1 cut(s)	1764
BstV1I	GCAGC	6 cut(s)	114, 745, 1074, 1492, 1600, 1657
BstV2I	GAAGAC	2 cut(s)	480, 1899
BstX2I	RGATCY	6 cut(s)	202, 309, 433, 1712, 1785, 2083
BstXI	CCANNNNNNTGG	1 cut(s)	325
BstYI	RGATCY	6 cut(s)	202, 309, 433, 1712, 1785, 2083
BsuRI	GGCC	3 cut(s)	349, 1009, 1463
BtgZI	GCGATG	1 cut(s)	1678
BtsCI	GGATG	3 cut(s)	1099, 1254, 2049
BtsIMutI	CAGTG	5 cut(s)	46, 330, 988, 1351, 1527
Cac8I	GCNNGC	8 cut(s)	96, 100, 127, 630, 756, 789, 1453, 1971
CciI	TCATGA	2 cut(s)	997, 1882
CfoI	GCGC	1 cut(s)	1829
Cfr13I	GGNCC	4 cut(s)	347, 1252, 1462, 1739
Csp6I	GTAC	4 cut(s)	449, 484, 1633, 1758
CspCI	CAANNNNNGTGG	2 cut(s)	1440, 1475
CviQI	GTAC	4 cut(s)	449, 484, 1633, 1758
DdeI	CTNAG	9 cut(s)	14, 765, 867, 1314, 1530, 1830, 1848, 2025, 2074
DraIII	CACNNNGTG	1 cut(s)	414
Eam1104I	CTCTTC	1 cut(s)	1326
EarI	CTCTTC	1 cut(s)	1326
Ecl136II	GAGCTC	1 cut(s)	817
Eco130I	CCWWGG	1 cut(s)	350
Eco24I	GRGCYC	1 cut(s)	819
Eco32I	GATATC	1 cut(s)	1913
Eco47I	GGWCC	2 cut(s)	1252, 1739
Eco53kI	GAGCTC	1 cut(s)	817
Eco57I	CTGAAG	1 cut(s)	1327
Eco88I	CYCGRG	2 cut(s)	119, 1687
EcoICRI	GAGCTC	1 cut(s)	817
EcoNI	CCTNNNNNAGG	1 cut(s)	1028
EcoO109I	RGGNCCY	1 cut(s)	1739
EcoRII	CCWGG	3 cut(s)	496, 2003, 2089
EcoRV	GATATC	1 cut(s)	1913
EcoT14I	CCWWGG	1 cut(s)	350
EcoT38I	GRGCYC	1 cut(s)	819
ErhI	CCWWGG	1 cut(s)	350
Esp3I	CGTCTC	1 cut(s)	460
FalI	AAGNNNNNCTT	2 cut(s)	1580, 1612
FaqI	GGGAC	3 cut(s)	44, 194, 300
FbaI	TGATCA	1 cut(s)	994
Fnu4HI	GCNGC	6 cut(s)	103, 734, 1063, 1506, 1614, 1671
FokI	GGATG	3 cut(s)	1106, 1261, 2056
FriOI	GRGCYC	1 cut(s)	819
Fsp4HI	GCNGC	6 cut(s)	103, 734, 1063, 1506, 1614, 1671
FspBI	CTAG	4 cut(s)	114, 126, 543, 1647
GlaI	GCGC	1 cut(s)	1828
GluI	GCNGC	6 cut(s)	103, 734, 1063, 1506, 1614, 1671
GsuI	CTGGAG	1 cut(s)	583
HaeIII	GGCC	3 cut(s)	349, 1009, 1463
HapII	CCGG	4 cut(s)	977, 1328, 1480, 1782
HhaI	GCGC	1 cut(s)	1829
Hin6I	GCGC	1 cut(s)	1827
HinP1I	GCGC	1 cut(s)	1827
HincII	GTYRAC	1 cut(s)	379
HindII	GTYRAC	1 cut(s)	379
HpaII	CCGG	4 cut(s)	977, 1328, 1480, 1782
HphI	GGTGA	3 cut(s)	433, 752, 1979
Hpy166II	GTNNAC	4 cut(s)	289, 379, 1628, 1635
Hpy188I	TCNGA	7 cut(s)	25, 784, 841, 1293, 1306, 1849, 1855
Hpy8I	GTNNAC	4 cut(s)	289, 379, 1628, 1635
HpyCH4IV	ACGT	1 cut(s)	1844
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1979
HpyF3I	CTNAG	9 cut(s)	14, 765, 867, 1314, 1530, 1830, 1848, 2025, 2074
HpySE526I	ACGT	1 cut(s)	1844
HspAI	GCGC	1 cut(s)	1827
Kpn2I	TCCGGA	1 cut(s)	1327
Ksp22I	TGATCA	1 cut(s)	994
LmnI	GCTCC	5 cut(s)	197, 673, 784, 1330, 2067
Lsp1109I	GCAGC	6 cut(s)	114, 745, 1074, 1492, 1600, 1657
LweI	GCATC	4 cut(s)	1084, 1600, 1701, 2079
MaeI	CTAG	4 cut(s)	114, 126, 543, 1647
MaeII	ACGT	1 cut(s)	1844
MaeIII	GTNAC	7 cut(s)	17, 35, 421, 557, 740, 1376, 1721
MfeI	CAATTG	2 cut(s)	727, 759
MflI	RGATCY	6 cut(s)	202, 309, 433, 1712, 1785, 2083
MhlI	GDGCHC	2 cut(s)	819, 1209
MlyI	GAGTC	4 cut(s)	14, 1652, 1711, 1859
MmeI	TCCRAC	2 cut(s)	1750, 2021
MroI	TCCGGA	1 cut(s)	1327
MroXI	GAANNNNTTC	2 cut(s)	1340, 1591
MseI	TTAA	3 cut(s)	237, 611, 852
MslI	CAYNNNNRTG	3 cut(s)	239, 323, 1697
MspA1I	CMGCKG	1 cut(s)	1505
MspI	CCGG	4 cut(s)	977, 1328, 1480, 1782
MspR9I	CCNGG	4 cut(s)	498, 1783, 2005, 2091
MunI	CAATTG	2 cut(s)	727, 759
MvaI	CCWGG	3 cut(s)	498, 2005, 2091
MwoI	GCNNNNNNNGC	1 cut(s)	1979
NciI	CCSGG	1 cut(s)	1783
NheI	GCTAGC	1 cut(s)	125
NlaIV	GGNNCC	3 cut(s)	435, 1464, 1714
NmuCI	GTSAC	3 cut(s)	17, 421, 740
NspI	RCATGY	2 cut(s)	98, 1969
NspV	TTCGAA	1 cut(s)	656
PaeI	GCATGC	1 cut(s)	98
PaeR7I	CTCGAG	2 cut(s)	119, 1687
PagI	TCATGA	2 cut(s)	997, 1882
PdmI	GAANNNNTTC	2 cut(s)	1340, 1591
PfeI	GAWTC	7 cut(s)	298, 686, 959, 1258, 1592, 1778, 1879
PflMI	CCANNNNNTGG	1 cut(s)	949
PfoI	TCCNGGA	2 cut(s)	496, 1781
PkrI	GCNGC	6 cut(s)	104, 735, 1064, 1507, 1615, 1672
PleI	GAGTC	4 cut(s)	14, 1651, 1710, 1858
PpsI	GAGTC	4 cut(s)	14, 1651, 1710, 1858
PpuMI	RGGWCCY	1 cut(s)	1739
Psp124BI	GAGCTC	1 cut(s)	819
Psp5II	RGGWCCY	1 cut(s)	1739
Psp6I	CCWGG	3 cut(s)	496, 2003, 2089
PspGI	CCWGG	3 cut(s)	496, 2003, 2089
PspN4I	GGNNCC	3 cut(s)	435, 1464, 1714
PspPI	GGNCC	4 cut(s)	347, 1252, 1462, 1739
PspPPI	RGGWCCY	1 cut(s)	1739
PspXI	VCTCGAGB	1 cut(s)	119
PstI	CTGCAG	1 cut(s)	1768
PsuI	RGATCY	6 cut(s)	202, 309, 433, 1712, 1785, 2083
PvuII	CAGCTG	1 cut(s)	1505
RsaI	GTAC	4 cut(s)	450, 485, 1634, 1759
RsaNI	GTAC	4 cut(s)	449, 484, 1633, 1758
RseI	CAYNNNNRTG	3 cut(s)	239, 323, 1697
SacI	GAGCTC	1 cut(s)	819
SaqAI	TTAA	3 cut(s)	237, 611, 852
SatI	GCNGC	6 cut(s)	103, 734, 1063, 1506, 1614, 1671
Sau96I	GGNCC	4 cut(s)	347, 1252, 1462, 1739
SchI	GAGTC	4 cut(s)	14, 1652, 1711, 1859
ScrFI	CCNGG	4 cut(s)	498, 1783, 2005, 2091
SduI	GDGCHC	2 cut(s)	819, 1209
SfaNI	GCATC	4 cut(s)	1084, 1600, 1701, 2079
SfcI	CTRYAG	1 cut(s)	1764
Sfr274I	CTCGAG	2 cut(s)	119, 1687
SfuI	TTCGAA	1 cut(s)	656
SinI	GGWCC	2 cut(s)	1252, 1739
SlaI	CTCGAG	2 cut(s)	119, 1687
SmiMI	CAYNNNNRTG	3 cut(s)	239, 323, 1697
SmlI	CTYRAG	3 cut(s)	119, 1665, 1687
SmoI	CTYRAG	3 cut(s)	119, 1665, 1687
SphI	GCATGC	1 cut(s)	98
SsiI	CCGC	1 cut(s)	389
SspI	AATATT	2 cut(s)	80, 274
SspMI	CTAG	4 cut(s)	114, 126, 543, 1647
SstI	GAGCTC	1 cut(s)	819
StyD4I	CCNGG	4 cut(s)	496, 1781, 2003, 2089
StyI	CCWWGG	1 cut(s)	350
TaiI	ACGT	1 cut(s)	1847
TaqI	TCGA	5 cut(s)	120, 159, 293, 656, 1688
TatI	WGTACW	1 cut(s)	1757
TfiI	GAWTC	7 cut(s)	298, 686, 959, 1258, 1592, 1778, 1879
Tru1I	TTAA	3 cut(s)	237, 611, 852
Tru9I	TTAA	3 cut(s)	237, 611, 852
TscAI	CASTG	5 cut(s)	46, 330, 988, 1351, 1534
TseFI	GTSAC	3 cut(s)	17, 421, 740
TseI	GCWGC	6 cut(s)	102, 733, 1062, 1505, 1613, 1670
Tsp45I	GTSAC	3 cut(s)	17, 421, 740
TspGWI	ACGGA	2 cut(s)	184, 302
TspRI	CASTG	5 cut(s)	46, 330, 988, 1351, 1534
Van91I	CCANNNNNTGG	1 cut(s)	949
VpaK11BI	GGWCC	2 cut(s)	1252, 1739
XagI	CCTNNNNNAGG	1 cut(s)	1028
XapI	RAATTY	5 cut(s)	658, 1001, 1473, 1600, 1873
XceI	RCATGY	2 cut(s)	98, 1969
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2011
XhoI	CTCGAG	2 cut(s)	119, 1687
XmnI	GAANNNNTTC	2 cut(s)	1340, 1591
XspI	CTAG	4 cut(s)	114, 126, 543, 1647

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.