Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0028200.1

Orthogroup ID

OG0006171

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 2046

Gene Structure 2046 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0028200.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1392 bp

cggattactcctactgttttggagattatgtgttcaggatggtccagaatcagtttgatgaacaagctgataaaaactatcggaacacaaggtctgacatgactgaggaggtagctccggaagagaagaacttcagtggggatcaagatgacttcacagataaaagttacctaccttgcattggcaatgttttgggcttcatagatggtgctttagaagtgagatgggcaactggtattacaagcaaggtggccccatgtgaaattttccggtttgataaacatgaaggttcagctgcaatccccgcagaagatgacactgaggaattgaacaaagagataattcaacatgaaaaacaacctaataacgaagaaggaaaggattccttgaatttagatgatgctgctaaaagttgtaaaccgtacacaagcgagtctagttcctatttccttcctcaagctgccattggatttttctcgagcatcgctgttagtctctttggatcccatagctacacatcactttcaggtccttccccgtcagtctgtacttctgaagttggaaaggaatccgggatctcccatgagaaaggaatagtagaaactcgtgatgtctgtgctgagccacattcaacgtctgagtctgacattattggcaatgaaaatttgaatcatgaaggcgaagacattgaggggaacagatatcttccatgtttgaaagacaaagagagtgcagatcagttcaggcaatttgacatgcttgctgattgtgcagatcaccattttcatagtgccaggaaggagttggcattatctcaggtaaaaagaggttggatgaagaaggttcagcaagagtggagcatcttagagaaagatcttcctgaacaaatctatgtccgtgcgtttgaggaaaggatggatctactgcgggcagccattgttggtacaccaggaactccatatcatgatgggcttttcttctttgacatttatcttccaccagagtatcctcatgagccacctatggtacactacatttctggtgggctacgtgtgaacccgaacttgtatgagtctggaaaggtctgtctcagtctgcttaacacgtggactggtacgggcagtgaagtttggaatcctgggagctccaccattcttcaagttcttctctcccttcaggcccttgtgcttaatgacaggccatatttcaatgaagctggatatgatcagcaggtgggaagaactgagggagagaaaaactcagtgagctataatgaaaatgcattccttatgacttgcaagtccatgctgttttctctccaaaagccgcctaagcattttgaggggcttgtgatggaacacttcactcagcgctctgaaaatattctaatgt

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0006464 GO:0006807 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0010966 GO:0012505 GO:0015698 GO:0016036 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0030163 GO:0031625 GO:0031667 GO:0031668 GO:0031669 GO:0032446 GO:0032879 GO:0033554 GO:0034762 GO:0034765 GO:0036211 GO:0042592 GO:0042594 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043412 GO:0044070 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0048878 GO:0050789 GO:0050801 GO:0050896 GO:0051049 GO:0051179 GO:0051234 GO:0051716 GO:0055062 GO:0055081 GO:0055083 GO:0061630 GO:0061659 GO:0065007 GO:0065008 GO:0070647 GO:0071496 GO:0071704 GO:0072505 GO:0072506 GO:0098771 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1903795 GO:1903959 GO:2000185

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

463

Amino Acids

52.19

Weight (kDa)

4.75

Isoelectric Point (pI)

39.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006171)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33770
fragaria_vesca	FvH4_3g09200 FvH4_3g29950
malus_domestica	MD05G1312700.v1.1 MD10G1294500.v1.1
prunus_persica	Prupe.4G047400_v2.0.a1 Prupe.4G047400_v2.0.a1
pyrus_communis	pycom05g29070 pycom05g29080 pycom10g24620 pycom10g24630 pycom10g24640
rosa_chinensis	RchiOBHm_Chr5g0008401
rosa_laevigata	RLG00000031568
rosa_multiflora	Rmu_co8007308.1_g000001 Rmu_co8292313.1_g000001 Rmu_sc0004326.1_g000003 Rmu_sc0028200.1_g000001 Rmu_ssc0000388.1_g000061
rosa_roxburghii	Rroxscaffold_1G00068090
rosa_rugosa	Rorug04G0435600
rosa_samantha	Rh5AG064200 Rh5BG061400 Rh5CG071300 Rh5DG060200 Rh5DG060300
rosa_wichuraiana	Rw5G005660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1221
AasI	GACNNNNNNGTC	1 cut(s)	1299
Acc36I	ACCTGC	1 cut(s)	1221
AccIII	TCCGGA	1 cut(s)	117
AciI	CCGC	3 cut(s)	305, 927, 1327
AclWI	GGATC	5 cut(s)	149, 497, 510, 583, 926
AcsI	RAATTY	3 cut(s)	263, 390, 663
AcuI	CTGAAG	3 cut(s)	117, 575, 1159
AcvI	CACGTG	1 cut(s)	1106
AfaI	GTAC	5 cut(s)	424, 549, 945, 1028, 1116
AfeI	AGCGCT	1 cut(s)	1372
AfiI	CCNNNNNNNGG	1 cut(s)	181
AflIII	ACRYGT	2 cut(s)	1050, 1103
AgsI	TTSAA	8 cut(s)	330, 346, 390, 632, 669, 717, 1159, 1209
AjnI	CCWGG	3 cut(s)	793, 948, 1137
AluBI	AGCT	8 cut(s)	67, 115, 295, 460, 512, 1145, 1216, 1268
AluI	AGCT	8 cut(s)	67, 115, 295, 460, 512, 1145, 1216, 1268
Alw21I	GWGCWC	1 cut(s)	1147
Alw26I	GTCTC	2 cut(s)	499, 1093
AlwI	GGATC	5 cut(s)	149, 497, 510, 583, 926
Ama87I	CYCGRG	1 cut(s)	477
Aor13HI	TCCGGA	1 cut(s)	117
Aor51HI	AGCGCT	1 cut(s)	1372
AoxI	GGCC	3 cut(s)	251, 1178, 1198
ApeKI	GCWGC	4 cut(s)	295, 403, 460, 931
ApoI	RAATTY	3 cut(s)	263, 390, 663
Asp700I	GAANNNNTTC	3 cut(s)	130, 381, 1382
AspLEI	GCGC	1 cut(s)	1373
AspS9I	GGNCC	4 cut(s)	42, 252, 529, 1179
AsuC2I	CCSGG	1 cut(s)	573
AsuHPI	GGTGA	1 cut(s)	769
AvaI	CYCGRG	1 cut(s)	477
AvaII	GGWCC	2 cut(s)	42, 529
BaeI	ACNNNNGTAYC	2 cut(s)	988, 1021
BamHI	GGATCC	1 cut(s)	502
BanII	GRGCYC	1 cut(s)	1147
BauI	CACGAG	1 cut(s)	605
BbrPI	CACGTG	1 cut(s)	1106
BbsI	GAAGAC	1 cut(s)	689
Bbv12I	GWGCWC	1 cut(s)	1147
BbvI	GCAGC	4 cut(s)	282, 390, 447, 943
BccI	CCATC	6 cut(s)	33, 199, 218, 909, 961, 1347
BciT130I	CCWGG	3 cut(s)	795, 950, 1139
BciVI	GTATCC	1 cut(s)	1016
BclI	TGATCA	1 cut(s)	1224
BcnI	CCSGG	1 cut(s)	573
BcoDI	GTCTC	2 cut(s)	499, 1093
BfaI	CTAG	1 cut(s)	437
BfoI	RGCGCY	1 cut(s)	1374
BfuAI	ACCTGC	1 cut(s)	1221
BfuI	GTATCC	1 cut(s)	1016
BglII	AGATCT	1 cut(s)	873
BisI	GCNGC	5 cut(s)	296, 404, 461, 932, 1327
BlpI	GCTNAGC	1 cut(s)	620
BlsI	GCNGC	5 cut(s)	297, 405, 462, 933, 1328
Bme1390I	CCNGG	4 cut(s)	573, 795, 950, 1139
Bme18I	GGWCC	2 cut(s)	42, 529
BmeT110I	CYCGRG	1 cut(s)	477
BmgT120I	GGNCC	4 cut(s)	42, 252, 529, 1179
BmiI	GGNNCC	2 cut(s)	254, 504
BmrFI	CCNGG	4 cut(s)	573, 795, 950, 1139
BmsI	GCATC	3 cut(s)	390, 491, 869
BpiI	GAAGAC	1 cut(s)	689
BplI	GAGNNNNNCTC	2 cut(s)	1243, 1275
Bpu10I	CCTNAGC	1 cut(s)	1331
Bpu1102I	GCTNAGC	1 cut(s)	620
BpuEI	CTTGAG	1 cut(s)	440
BpuMI	CCSGG	1 cut(s)	573
BsaAI	YACGTR	2 cut(s)	1051, 1106
BsaJI	CCNNGG	1 cut(s)	1138
BsaWI	WCCGGW	2 cut(s)	117, 269
BsaXI	ACNNNNNCTCC	2 cut(s)	14, 44
Bsc4I	CCNNNNNNNGG	1 cut(s)	181
Bse1I	ACTGG	2 cut(s)	237, 1116
Bse3DI	GCAATG	2 cut(s)	192, 663
BseAI	TCCGGA	1 cut(s)	117
BseBI	CCWGG	3 cut(s)	795, 950, 1139
BseDI	CCNNGG	1 cut(s)	1138
BseGI	GGATG	3 cut(s)	44, 839, 920
BseLI	CCNNNNNNNGG	1 cut(s)	181
BseMI	GCAATG	2 cut(s)	192, 663
BseMII	CTCAG	9 cut(s)	95, 311, 611, 629, 829, 1104, 1235, 1274, 1381
BseNI	ACTGG	2 cut(s)	237, 1116
BseRI	GAGGAG	1 cut(s)	121
BseXI	GCAGC	4 cut(s)	282, 390, 447, 943
BsgI	GTGCAG	2 cut(s)	752, 791
BshFI	GGCC	3 cut(s)	253, 1180, 1200
BsiHKAI	GWGCWC	1 cut(s)	1147
BsiHKCI	CYCGRG	1 cut(s)	477
BsiSI	CCGG	3 cut(s)	118, 270, 572
BslI	CCNNNNNNNGG	1 cut(s)	181
BsmAI	GTCTC	2 cut(s)	499, 1093
BsmI	GAATGC	1 cut(s)	1282
BsnI	GGCC	3 cut(s)	253, 1180, 1200
BsoBI	CYCGRG	1 cut(s)	477
Bsp1286I	GDGCHC	1 cut(s)	1147
Bsp13I	TCCGGA	1 cut(s)	117
Bsp143I	GATC	8 cut(s)	141, 502, 575, 735, 774, 873, 918, 1224
Bsp1720I	GCTNAGC	1 cut(s)	620
BspACI	CCGC	3 cut(s)	305, 927, 1327
BspANI	GGCC	3 cut(s)	253, 1180, 1200
BspCNI	CTCAG	9 cut(s)	96, 312, 612, 630, 828, 1103, 1236, 1273, 1380
BspEI	TCCGGA	1 cut(s)	117
BspHI	TCATGA	3 cut(s)	672, 963, 1011
BspLI	GGNNCC	2 cut(s)	254, 504
BspMI	ACCTGC	1 cut(s)	1221
BspPI	GGATC	5 cut(s)	149, 497, 510, 583, 926
BsrDI	GCAATG	2 cut(s)	192, 663
BsrI	ACTGG	2 cut(s)	237, 1116
BssECI	CCNNGG	1 cut(s)	1138
BssMI	GATC	8 cut(s)	141, 502, 575, 735, 774, 873, 918, 1224
BssSI	CACGAG	1 cut(s)	605
Bst2BI	CACGAG	1 cut(s)	605
Bst2UI	CCWGG	3 cut(s)	795, 950, 1139
Bst4CI	ACNGT	2 cut(s)	16, 422
Bst6I	CTCTTC	1 cut(s)	116
BstBAI	YACGTR	2 cut(s)	1051, 1106
BstC8I	GCNNGC	2 cut(s)	761, 929
BstF5I	GGATG	3 cut(s)	44, 839, 920
BstH2I	RGCGCY	1 cut(s)	1374
BstHHI	GCGC	1 cut(s)	1373
BstKTI	GATC	8 cut(s)	144, 505, 578, 738, 777, 876, 921, 1227
BstMAI	GTCTC	2 cut(s)	499, 1093
BstMBI	GATC	8 cut(s)	141, 502, 575, 735, 774, 873, 918, 1224
BstMWI	GCNNNNNNNGC	3 cut(s)	304, 769, 1332
BstNI	CCWGG	3 cut(s)	795, 950, 1139
BstNSI	RCATGY	1 cut(s)	759
BstSCI	CCNGG	4 cut(s)	571, 793, 948, 1137
BstV1I	GCAGC	4 cut(s)	282, 390, 447, 943
BstV2I	GAAGAC	1 cut(s)	689
BstX2I	RGATCY	4 cut(s)	502, 575, 873, 918
BstYI	RGATCY	4 cut(s)	502, 575, 873, 918
BsuI	GTATCC	1 cut(s)	1016
BsuRI	GGCC	3 cut(s)	253, 1180, 1200
BtgZI	GCGATG	1 cut(s)	468
BtsCI	GGATG	3 cut(s)	44, 839, 920
BtsI	GCAGTG	1 cut(s)	1128
BtsIMutI	CAGTG	4 cut(s)	141, 317, 1128, 1268
BveI	ACCTGC	1 cut(s)	1221
Cac8I	GCNNGC	2 cut(s)	761, 929
CciI	TCATGA	3 cut(s)	672, 963, 1011
CfoI	GCGC	1 cut(s)	1373
Cfr13I	GGNCC	4 cut(s)	42, 252, 529, 1179
Csp6I	GTAC	5 cut(s)	423, 548, 944, 1027, 1115
CspCI	CAANNNNNGTGG	2 cut(s)	230, 265
CviQI	GTAC	5 cut(s)	423, 548, 944, 1027, 1115
DpnI	GATC	8 cut(s)	143, 504, 577, 737, 776, 875, 920, 1226
DpnII	GATC	8 cut(s)	141, 502, 575, 735, 774, 873, 918, 1224
DrdI	GACNNNNNNGTC	1 cut(s)	1299
DseDI	GACNNNNNNGTC	1 cut(s)	1299
Eam1104I	CTCTTC	1 cut(s)	116
EarI	CTCTTC	1 cut(s)	116
Ecl136II	GAGCTC	1 cut(s)	1145
Eco24I	GRGCYC	1 cut(s)	1147
Eco32I	GATATC	1 cut(s)	703
Eco47I	GGWCC	2 cut(s)	42, 529
Eco47III	AGCGCT	1 cut(s)	1372
Eco53kI	GAGCTC	1 cut(s)	1145
Eco57I	CTGAAG	3 cut(s)	117, 575, 1159
Eco72I	CACGTG	1 cut(s)	1106
Eco88I	CYCGRG	1 cut(s)	477
EcoICRI	GAGCTC	1 cut(s)	1145
EcoO109I	RGGNCCY	2 cut(s)	529, 1179
EcoRII	CCWGG	3 cut(s)	793, 948, 1137
EcoRV	GATATC	1 cut(s)	703
EcoT22I	ATGCAT	1 cut(s)	1284
EcoT38I	GRGCYC	1 cut(s)	1147
FalI	AAGNNNNNCTT	2 cut(s)	370, 402
FauI	CCCGC	2 cut(s)	312, 920
FbaI	TGATCA	1 cut(s)	1224
Fnu4HI	GCNGC	5 cut(s)	296, 404, 461, 932, 1327
FokI	GGATG	3 cut(s)	51, 846, 927
FriOI	GRGCYC	1 cut(s)	1147
Fsp4HI	GCNGC	5 cut(s)	296, 404, 461, 932, 1327
FspBI	CTAG	1 cut(s)	437
GlaI	GCGC	1 cut(s)	1372
GluI	GCNGC	5 cut(s)	296, 404, 461, 932, 1327
HaeII	RGCGCY	1 cut(s)	1374
HaeIII	GGCC	3 cut(s)	253, 1180, 1200
HapII	CCGG	3 cut(s)	118, 270, 572
HhaI	GCGC	1 cut(s)	1373
Hin6I	GCGC	1 cut(s)	1371
HinP1I	GCGC	1 cut(s)	1371
HinfI	GANTC	8 cut(s)	48, 382, 433, 568, 640, 669, 1072, 1134
HpaII	CCGG	3 cut(s)	118, 270, 572
HphI	GGTGA	1 cut(s)	769
Hpy166II	GTNNAC	6 cut(s)	418, 425, 946, 1029, 1056, 1109
Hpy188I	TCNGA	6 cut(s)	83, 96, 555, 639, 645, 1377
Hpy8I	GTNNAC	6 cut(s)	418, 425, 946, 1029, 1056, 1109
HpyAV	CCTTC	8 cut(s)	280, 367, 460, 542, 670, 792, 834, 1183
HpyCH4III	ACNGT	2 cut(s)	16, 422
HpyCH4IV	ACGT	3 cut(s)	634, 1050, 1105
HpyCH4V	TGCA	6 cut(s)	179, 298, 733, 772, 1282, 1298
HpyF10VI	GCNNNNNNNGC	3 cut(s)	304, 769, 1332
HpySE526I	ACGT	3 cut(s)	634, 1050, 1105
HspAI	GCGC	1 cut(s)	1371
Kpn2I	TCCGGA	1 cut(s)	117
Ksp22I	TGATCA	1 cut(s)	1224
Kzo9I	GATC	8 cut(s)	141, 502, 575, 735, 774, 873, 918, 1224
LmnI	GCTCC	4 cut(s)	120, 857, 1142, 1150
Lsp1109I	GCAGC	4 cut(s)	282, 390, 447, 943
LweI	GCATC	3 cut(s)	390, 491, 869
MaeI	CTAG	1 cut(s)	437
MaeII	ACGT	3 cut(s)	634, 1050, 1105
MaeIII	GTNAC	1 cut(s)	166
MalI	GATC	8 cut(s)	143, 504, 577, 737, 776, 875, 920, 1226
MboI	GATC	8 cut(s)	141, 502, 575, 735, 774, 873, 918, 1224
MflI	RGATCY	4 cut(s)	502, 575, 873, 918
MhlI	GDGCHC	1 cut(s)	1147
MluCI	AATT	6 cut(s)	263, 325, 341, 390, 663, 748
MlyI	GAGTC	3 cut(s)	442, 649, 1081
MmeI	TCCRAC	2 cut(s)	540, 811
Mph1103I	ATGCAT	1 cut(s)	1284
MroI	TCCGGA	1 cut(s)	117
MroXI	GAANNNNTTC	3 cut(s)	130, 381, 1382
MseI	TTAA	2 cut(s)	1100, 1190
MspA1I	CMGCKG	1 cut(s)	295
MspI	CCGG	3 cut(s)	118, 270, 572
MspR9I	CCNGG	4 cut(s)	573, 795, 950, 1139
Mva1269I	GAATGC	1 cut(s)	1282
MvaI	CCWGG	3 cut(s)	795, 950, 1139
MwoI	GCNNNNNNNGC	3 cut(s)	304, 769, 1332
NciI	CCSGG	1 cut(s)	573
NdeII	GATC	8 cut(s)	141, 502, 575, 735, 774, 873, 918, 1224
NlaIV	GGNNCC	2 cut(s)	254, 504
NsiI	ATGCAT	1 cut(s)	1284
NspI	RCATGY	1 cut(s)	759
PaeR7I	CTCGAG	1 cut(s)	477
PagI	TCATGA	3 cut(s)	672, 963, 1011
PaqCI	CACCTGC	1 cut(s)	1221
PctI	GAATGC	1 cut(s)	1282
PdmI	GAANNNNTTC	3 cut(s)	130, 381, 1382
PfeI	GAWTC	5 cut(s)	48, 382, 568, 669, 1134
PfoI	TCCNGGA	1 cut(s)	571
PkrI	GCNGC	5 cut(s)	297, 405, 462, 933, 1328
PleI	GAGTC	3 cut(s)	441, 648, 1080
PmaCI	CACGTG	1 cut(s)	1106
PmlI	CACGTG	1 cut(s)	1106
PpsI	GAGTC	3 cut(s)	441, 648, 1080
Ppu21I	YACGTR	2 cut(s)	1051, 1106
PpuMI	RGGWCCY	1 cut(s)	529
Psp124BI	GAGCTC	1 cut(s)	1147
Psp5II	RGGWCCY	1 cut(s)	529
Psp6I	CCWGG	3 cut(s)	793, 948, 1137
PspCI	CACGTG	1 cut(s)	1106
PspGI	CCWGG	3 cut(s)	793, 948, 1137
PspN4I	GGNNCC	2 cut(s)	254, 504
PspPI	GGNCC	4 cut(s)	42, 252, 529, 1179
PspPPI	RGGWCCY	1 cut(s)	529
PsuI	RGATCY	4 cut(s)	502, 575, 873, 918
PvuII	CAGCTG	1 cut(s)	295
RsaI	GTAC	5 cut(s)	424, 549, 945, 1028, 1116
RsaNI	GTAC	5 cut(s)	423, 548, 944, 1027, 1115
SacI	GAGCTC	1 cut(s)	1147
SaqAI	TTAA	2 cut(s)	1100, 1190
SatI	GCNGC	5 cut(s)	296, 404, 461, 932, 1327
Sau3AI	GATC	8 cut(s)	141, 502, 575, 735, 774, 873, 918, 1224
Sau96I	GGNCC	4 cut(s)	42, 252, 529, 1179
SchI	GAGTC	3 cut(s)	442, 649, 1081
ScrFI	CCNGG	4 cut(s)	573, 795, 950, 1139
SduI	GDGCHC	1 cut(s)	1147
SfaNI	GCATC	3 cut(s)	390, 491, 869
Sfr274I	CTCGAG	1 cut(s)	477
SinI	GGWCC	2 cut(s)	42, 529
SlaI	CTCGAG	1 cut(s)	477
SmlI	CTYRAG	2 cut(s)	455, 477
SmoI	CTYRAG	2 cut(s)	455, 477
Sse9I	AATT	6 cut(s)	263, 325, 341, 390, 663, 748
SsiI	CCGC	3 cut(s)	305, 927, 1327
SspI	AATATT	1 cut(s)	1383
SspMI	CTAG	1 cut(s)	437
SstI	GAGCTC	1 cut(s)	1147
StyD4I	CCNGG	4 cut(s)	571, 793, 948, 1137
TaaI	ACNGT	2 cut(s)	16, 422
TaiI	ACGT	3 cut(s)	637, 1053, 1108
TaqI	TCGA	1 cut(s)	478
TasI	AATT	6 cut(s)	263, 325, 341, 390, 663, 748
TatI	WGTACW	1 cut(s)	547
TauI	GCSGC	1 cut(s)	1329
TfiI	GAWTC	5 cut(s)	48, 382, 568, 669, 1134
Tru1I	TTAA	2 cut(s)	1100, 1190
Tru9I	TTAA	2 cut(s)	1100, 1190
TscAI	CASTG	4 cut(s)	141, 324, 1128, 1268
TseI	GCWGC	4 cut(s)	295, 403, 460, 931
TspGWI	ACGGA	1 cut(s)	886
TspRI	CASTG	4 cut(s)	141, 324, 1128, 1268
VpaK11BI	GGWCC	2 cut(s)	42, 529
XapI	RAATTY	3 cut(s)	263, 390, 663
XceI	RCATGY	1 cut(s)	759
XcmI	CCANNNNNNNNNTGG	1 cut(s)	801
XhoI	CTCGAG	1 cut(s)	477
XmnI	GAANNNNTTC	3 cut(s)	130, 381, 1382
XspI	CTAG	1 cut(s)	437
Zsp2I	ATGCAT	1 cut(s)	1284

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.