WPP domain-associated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 197, 1041 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1580 |
| AccB1I | GGYRCC | 1 cut(s) | 458 |
| AccII | CGCG | 1 cut(s) | 1926 |
| AccIII | TCCGGA | 2 cut(s) | 106, 2436 |
| AciI | CCGC | 4 cut(s) | 497, 571, 865, 2451 |
| AclWI | GGATC | 6 cut(s) | 367, 460, 810, 846, 1156, 2355 |
| AcsI | RAATTY | 6 cut(s) | 710, 1093, 1191, 1774, 1884, 2176 |
| AcuI | CTGAAG | 3 cut(s) | 327, 882, 1242 |
| AfaI | GTAC | 4 cut(s) | 293, 1465, 1693, 2258 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 600, 2296 |
| AflII | CTTAAG | 2 cut(s) | 964, 2075 |
| AflIII | ACRYGT | 1 cut(s) | 972 |
| AhlI | ACTAGT | 1 cut(s) | 650 |
| AjnI | CCWGG | 4 cut(s) | 72, 506, 768, 2407 |
| AlwI | GGATC | 6 cut(s) | 367, 460, 810, 846, 1156, 2355 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1307 |
| Aor13HI | TCCGGA | 2 cut(s) | 106, 2436 |
| AoxI | GGCC | 1 cut(s) | 1450 |
| ApeKI | GCWGC | 3 cut(s) | 230, 604, 1307 |
| ApoI | RAATTY | 6 cut(s) | 710, 1093, 1191, 1774, 1884, 2176 |
| AspLEI | GCGC | 4 cut(s) | 768, 1083, 1150, 1251 |
| AspS9I | GGNCC | 3 cut(s) | 510, 697, 1450 |
| AsuHPI | GGTGA | 2 cut(s) | 193, 412 |
| AsuII | TTCGAA | 1 cut(s) | 1363 |
| AvaII | GGWCC | 2 cut(s) | 510, 697 |
| BanI | GGYRCC | 1 cut(s) | 458 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1387, 1419 |
| BauI | CACGAG | 2 cut(s) | 174, 598 |
| BbsI | GAAGAC | 1 cut(s) | 1578 |
| BbvCI | CCTCAGC | 3 cut(s) | 1338, 2301, 2307 |
| BbvI | GCAGC | 3 cut(s) | 217, 616, 1294 |
| BccI | CCATC | 4 cut(s) | 1192, 1591, 1702, 2476 |
| BceAI | ACGGC | 3 cut(s) | 1616, 1886, 2282 |
| BciT130I | CCWGG | 4 cut(s) | 74, 508, 770, 2409 |
| BclI | TGATCA | 1 cut(s) | 990 |
| BcuI | ACTAGT | 1 cut(s) | 650 |
| BfaI | CTAG | 7 cut(s) | 554, 651, 776, 1142, 1988, 2141, 2181 |
| BfmI | CTRYAG | 2 cut(s) | 639, 1806 |
| BfoI | RGCGCY | 2 cut(s) | 1151, 1252 |
| BfrI | CTTAAG | 2 cut(s) | 964, 2075 |
| BglII | AGATCT | 2 cut(s) | 253, 1528 |
| BisI | GCNGC | 3 cut(s) | 231, 605, 1308 |
| BlsI | GCNGC | 3 cut(s) | 232, 606, 1309 |
| Bme1390I | CCNGG | 4 cut(s) | 74, 508, 770, 2409 |
| Bme18I | GGWCC | 2 cut(s) | 510, 697 |
| BmgT120I | GGNCC | 3 cut(s) | 510, 697, 1450 |
| BmiI | GGNNCC | 1 cut(s) | 460 |
| BmrFI | CCNGG | 4 cut(s) | 74, 508, 770, 2409 |
| BmrI | ACTGGG | 1 cut(s) | 151 |
| BmsI | GCATC | 5 cut(s) | 217, 393, 1225, 2258, 2421 |
| BmuI | ACTGGG | 1 cut(s) | 151 |
| BoxI | GACNNNNGTC | 2 cut(s) | 492, 973 |
| BpiI | GAAGAC | 1 cut(s) | 1578 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1817, 1849 |
| BpmI | CTGGAG | 2 cut(s) | 56, 2291 |
| Bpu10I | CCTNAGC | 4 cut(s) | 948, 1338, 2301, 2307 |
| Bpu14I | TTCGAA | 1 cut(s) | 1363 |
| BpuEI | CTTGAG | 6 cut(s) | 143, 339, 653, 1990, 2276, 2375 |
| BsaAI | YACGTR | 1 cut(s) | 2256 |
| BsaI | GGTCTC | 4 cut(s) | 497, 953, 1023, 2458 |
| BsaJI | CCNNGG | 2 cut(s) | 2034, 2407 |
| BsaWI | WCCGGW | 2 cut(s) | 106, 2436 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2264, 2294, 2316, 2346 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 600, 2296 |
| Bse1I | ACTGG | 4 cut(s) | 146, 763, 940, 1260 |
| Bse3DI | GCAATG | 1 cut(s) | 1070 |
| BseAI | TCCGGA | 2 cut(s) | 106, 2436 |
| BseBI | CCWGG | 4 cut(s) | 74, 508, 770, 2409 |
| BseDI | CCNNGG | 2 cut(s) | 2034, 2407 |
| BseGI | GGATG | 3 cut(s) | 115, 475, 679 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 600, 2296 |
| BseMI | GCAATG | 1 cut(s) | 1070 |
| BseNI | ACTGG | 4 cut(s) | 146, 763, 940, 1260 |
| BseRI | GAGGAG | 3 cut(s) | 586, 1748, 2103 |
| BseXI | GCAGC | 3 cut(s) | 217, 616, 1294 |
| BseYI | CCCAGC | 1 cut(s) | 1747 |
| Bsh1236I | CGCG | 1 cut(s) | 1926 |
| BshFI | GGCC | 1 cut(s) | 1452 |
| BshNI | GGYRCC | 1 cut(s) | 458 |
| BsiSI | CCGG | 2 cut(s) | 107, 2437 |
| BslFI | GGGAC | 2 cut(s) | 313, 830 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 600, 2296 |
| BsmBI | CGTCTC | 1 cut(s) | 1946 |
| BsmFI | GGGAC | 2 cut(s) | 313, 830 |
| BsmI | GAATGC | 1 cut(s) | 549 |
| BsnI | GGCC | 1 cut(s) | 1452 |
| Bso31I | GGTCTC | 4 cut(s) | 497, 953, 1023, 2458 |
| Bsp119I | TTCGAA | 1 cut(s) | 1363 |
| Bsp13I | TCCGGA | 2 cut(s) | 106, 2436 |
| Bsp1407I | TGTACA | 1 cut(s) | 1463 |
| BspACI | CCGC | 4 cut(s) | 497, 571, 865, 2451 |
| BspANI | GGCC | 1 cut(s) | 1452 |
| BspEI | TCCGGA | 2 cut(s) | 106, 2436 |
| BspFNI | CGCG | 1 cut(s) | 1926 |
| BspHI | TCATGA | 4 cut(s) | 46, 340, 805, 1593 |
| BspLI | GGNNCC | 1 cut(s) | 460 |
| BspMAI | CTGCAG | 1 cut(s) | 643 |
| BspPI | GGATC | 6 cut(s) | 367, 460, 810, 846, 1156, 2355 |
| BspQI | GCTCTTC | 1 cut(s) | 539 |
| BspT104I | TTCGAA | 1 cut(s) | 1363 |
| BspT107I | GGYRCC | 1 cut(s) | 458 |
| BspTI | CTTAAG | 2 cut(s) | 964, 2075 |
| BspTNI | GGTCTC | 4 cut(s) | 497, 953, 1023, 2458 |
| BsrDI | GCAATG | 1 cut(s) | 1070 |
| BsrGI | TGTACA | 1 cut(s) | 1463 |
| BsrI | ACTGG | 4 cut(s) | 146, 763, 940, 1260 |
| BssECI | CCNNGG | 2 cut(s) | 2034, 2407 |
| BssSI | CACGAG | 2 cut(s) | 174, 598 |
| Bst2BI | CACGAG | 2 cut(s) | 174, 598 |
| Bst2UI | CCWGG | 4 cut(s) | 74, 508, 770, 2409 |
| Bst4CI | ACNGT | 4 cut(s) | 396, 466, 520, 562 |
| Bst6I | CTCTTC | 7 cut(s) | 3, 303, 539, 918, 1269, 1596, 1971 |
| BstAFI | CTTAAG | 2 cut(s) | 964, 2075 |
| BstAUI | TGTACA | 1 cut(s) | 1463 |
| BstBAI | YACGTR | 1 cut(s) | 2256 |
| BstBI | TTCGAA | 1 cut(s) | 1363 |
| BstC8I | GCNNGC | 1 cut(s) | 1924 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2294 |
| BstF5I | GGATG | 3 cut(s) | 115, 475, 679 |
| BstFNI | CGCG | 1 cut(s) | 1926 |
| BstH2I | RGCGCY | 2 cut(s) | 1151, 1252 |
| BstHHI | GCGC | 4 cut(s) | 768, 1083, 1150, 1251 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 610, 1147 |
| BstNI | CCWGG | 4 cut(s) | 74, 508, 770, 2409 |
| BstNSI | RCATGY | 3 cut(s) | 976, 1676, 2197 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 492, 973 |
| BstSCI | CCNGG | 4 cut(s) | 72, 506, 768, 2407 |
| BstSFI | CTRYAG | 2 cut(s) | 639, 1806 |
| BstSNI | TACGTA | 1 cut(s) | 2256 |
| BstUI | CGCG | 1 cut(s) | 1926 |
| BstV1I | GCAGC | 3 cut(s) | 217, 616, 1294 |
| BstV2I | GAAGAC | 1 cut(s) | 1578 |
| BstX2I | RGATCY | 5 cut(s) | 253, 359, 1161, 1528, 2347 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 80 |
| BstYI | RGATCY | 5 cut(s) | 253, 359, 1161, 1528, 2347 |
| BsuRI | GGCC | 1 cut(s) | 1452 |
| BtsCI | GGATG | 3 cut(s) | 115, 475, 679 |
| BtsI | GCAGTG | 1 cut(s) | 648 |
| BtsIMutI | CAGTG | 3 cut(s) | 462, 648, 1904 |
| Cac8I | GCNNGC | 1 cut(s) | 1924 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1307 |
| CciI | TCATGA | 4 cut(s) | 46, 340, 805, 1593 |
| CfoI | GCGC | 4 cut(s) | 768, 1083, 1150, 1251 |
| Cfr13I | GGNCC | 3 cut(s) | 510, 697, 1450 |
| CseI | GACGC | 2 cut(s) | 1313, 2173 |
| CsiI | ACCWGGT | 1 cut(s) | 506 |
| Csp6I | GTAC | 4 cut(s) | 292, 1464, 1692, 2257 |
| CviQI | GTAC | 4 cut(s) | 292, 1464, 1692, 2257 |
| DraI | TTTAAA | 1 cut(s) | 1245 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1580 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1580 |
| Eam1104I | CTCTTC | 7 cut(s) | 3, 303, 539, 918, 1269, 1596, 1971 |
| EarI | CTCTTC | 7 cut(s) | 3, 303, 539, 918, 1269, 1596, 1971 |
| Eco105I | TACGTA | 1 cut(s) | 2256 |
| Eco31I | GGTCTC | 4 cut(s) | 497, 953, 1023, 2458 |
| Eco32I | GATATC | 1 cut(s) | 1962 |
| Eco47I | GGWCC | 2 cut(s) | 510, 697 |
| Eco57I | CTGAAG | 3 cut(s) | 327, 882, 1242 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2294 |
| EcoRI | GAATTC | 1 cut(s) | 2176 |
| EcoRII | CCWGG | 4 cut(s) | 72, 506, 768, 2407 |
| EcoRV | GATATC | 1 cut(s) | 1962 |
| Esp3I | CGTCTC | 1 cut(s) | 1946 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1096, 1128, 1281, 1313, 2058, 2090 |
| FaqI | GGGAC | 2 cut(s) | 313, 830 |
| FauNDI | CATATG | 1 cut(s) | 1510 |
| FbaI | TGATCA | 1 cut(s) | 990 |
| Fnu4HI | GCNGC | 3 cut(s) | 231, 605, 1308 |
| FokI | GGATG | 3 cut(s) | 122, 482, 686 |
| Fsp4HI | GCNGC | 3 cut(s) | 231, 605, 1308 |
| FspBI | CTAG | 7 cut(s) | 554, 651, 776, 1142, 1988, 2141, 2181 |
| GlaI | GCGC | 4 cut(s) | 767, 1082, 1149, 1250 |
| GluI | GCNGC | 3 cut(s) | 231, 605, 1308 |
| GsaI | CCCAGC | 1 cut(s) | 1751 |
| GsuI | CTGGAG | 2 cut(s) | 56, 2291 |
| HaeII | RGCGCY | 2 cut(s) | 1151, 1252 |
| HaeIII | GGCC | 1 cut(s) | 1452 |
| HapII | CCGG | 2 cut(s) | 107, 2437 |
| HgaI | GACGC | 2 cut(s) | 1313, 2173 |
| HhaI | GCGC | 4 cut(s) | 768, 1083, 1150, 1251 |
| Hin6I | GCGC | 4 cut(s) | 766, 1081, 1148, 1249 |
| HinP1I | GCGC | 4 cut(s) | 766, 1081, 1148, 1249 |
| HincII | GTYRAC | 5 cut(s) | 165, 1056, 1283, 1714, 2204 |
| HindII | GTYRAC | 5 cut(s) | 165, 1056, 1283, 1714, 2204 |
| HindIII | AAGCTT | 1 cut(s) | 1401 |
| HpaI | GTTAAC | 1 cut(s) | 165 |
| HpaII | CCGG | 2 cut(s) | 107, 2437 |
| HphI | GGTGA | 2 cut(s) | 193, 412 |
| Hpy166II | GTNNAC | 5 cut(s) | 165, 1056, 1283, 1714, 2204 |
| Hpy8I | GTNNAC | 5 cut(s) | 165, 1056, 1283, 1714, 2204 |
| HpyAV | CCTTC | 7 cut(s) | 1123, 1217, 1630, 1682, 1762, 1999, 2290 |
| HpyCH4III | ACNGT | 4 cut(s) | 396, 466, 520, 562 |
| HpyCH4IV | ACGT | 1 cut(s) | 2255 |
| HpyCH4V | TGCA | 4 cut(s) | 641, 1672, 1855, 2197 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 610, 1147 |
| HpySE526I | ACGT | 1 cut(s) | 2255 |
| HspAI | GCGC | 4 cut(s) | 766, 1081, 1148, 1249 |
| Kpn2I | TCCGGA | 2 cut(s) | 106, 2436 |
| Ksp22I | TGATCA | 1 cut(s) | 990 |
| KspAI | GTTAAC | 1 cut(s) | 165 |
| LguI | GCTCTTC | 1 cut(s) | 539 |
| LmnI | GCTCC | 3 cut(s) | 610, 853, 1138 |
| Lsp1109I | GCAGC | 3 cut(s) | 217, 616, 1294 |
| LweI | GCATC | 5 cut(s) | 217, 393, 1225, 2258, 2421 |
| MabI | ACCWGGT | 1 cut(s) | 506 |
| MaeI | CTAG | 7 cut(s) | 554, 651, 776, 1142, 1988, 2141, 2181 |
| MaeII | ACGT | 1 cut(s) | 2255 |
| MaeIII | GTNAC | 7 cut(s) | 208, 646, 1320, 1435, 1675, 2217, 2285 |
| MfeI | CAATTG | 1 cut(s) | 2117 |
| MflI | RGATCY | 5 cut(s) | 253, 359, 1161, 1528, 2347 |
| MlyI | GAGTC | 6 cut(s) | 230, 335, 644, 673, 1568, 2209 |
| MmeI | TCCRAC | 2 cut(s) | 675, 1962 |
| MroI | TCCGGA | 2 cut(s) | 106, 2436 |
| MslI | CAYNNNNRTG | 1 cut(s) | 447 |
| MspA1I | CMGCKG | 1 cut(s) | 1790 |
| MspCI | CTTAAG | 2 cut(s) | 964, 2075 |
| MspI | CCGG | 2 cut(s) | 107, 2437 |
| MspR9I | CCNGG | 4 cut(s) | 74, 508, 770, 2409 |
| MunI | CAATTG | 1 cut(s) | 2117 |
| Mva1269I | GAATGC | 1 cut(s) | 549 |
| MvaI | CCWGG | 4 cut(s) | 74, 508, 770, 2409 |
| MvnI | CGCG | 1 cut(s) | 1926 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 610, 1147 |
| NdeI | CATATG | 1 cut(s) | 1510 |
| NlaIV | GGNNCC | 1 cut(s) | 460 |
| NmuCI | GTSAC | 4 cut(s) | 1320, 1435, 2217, 2285 |
| NspI | RCATGY | 3 cut(s) | 976, 1676, 2197 |
| NspV | TTCGAA | 1 cut(s) | 1363 |
| PagI | TCATGA | 4 cut(s) | 46, 340, 805, 1593 |
| PciI | ACATGT | 1 cut(s) | 972 |
| PciSI | GCTCTTC | 1 cut(s) | 539 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2171 |
| PctI | GAATGC | 1 cut(s) | 549 |
| PflFI | GACNNNGTC | 2 cut(s) | 508, 2102 |
| PkrI | GCNGC | 3 cut(s) | 232, 606, 1309 |
| PleI | GAGTC | 6 cut(s) | 229, 334, 643, 672, 1568, 2208 |
| PpsI | GAGTC | 6 cut(s) | 229, 334, 643, 672, 1568, 2208 |
| Ppu21I | YACGTR | 1 cut(s) | 2256 |
| PscI | ACATGT | 1 cut(s) | 972 |
| PshAI | GACNNNNGTC | 2 cut(s) | 492, 973 |
| PsiI | TTATAA | 2 cut(s) | 197, 1041 |
| Psp6I | CCWGG | 4 cut(s) | 72, 506, 768, 2407 |
| PspFI | CCCAGC | 1 cut(s) | 1747 |
| PspGI | CCWGG | 4 cut(s) | 72, 506, 768, 2407 |
| PspN4I | GGNNCC | 1 cut(s) | 460 |
| PspPI | GGNCC | 3 cut(s) | 510, 697, 1450 |
| PstI | CTGCAG | 1 cut(s) | 643 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1307 |
| PsuI | RGATCY | 5 cut(s) | 253, 359, 1161, 1528, 2347 |
| PsyI | GACNNNGTC | 2 cut(s) | 508, 2102 |
| PvuII | CAGCTG | 1 cut(s) | 1790 |
| RsaI | GTAC | 4 cut(s) | 293, 1465, 1693, 2258 |
| RsaNI | GTAC | 4 cut(s) | 292, 1464, 1692, 2257 |
| RseI | CAYNNNNRTG | 1 cut(s) | 447 |
| SapI | GCTCTTC | 1 cut(s) | 539 |
| SatI | GCNGC | 3 cut(s) | 231, 605, 1308 |
| Sau96I | GGNCC | 3 cut(s) | 510, 697, 1450 |
| SchI | GAGTC | 6 cut(s) | 230, 335, 644, 673, 1568, 2209 |
| ScrFI | CCNGG | 4 cut(s) | 74, 508, 770, 2409 |
| SexAI | ACCWGGT | 1 cut(s) | 506 |
| SfaNI | GCATC | 5 cut(s) | 217, 393, 1225, 2258, 2421 |
| SfcI | CTRYAG | 2 cut(s) | 639, 1806 |
| SfuI | TTCGAA | 1 cut(s) | 1363 |
| SinI | GGWCC | 2 cut(s) | 510, 697 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 447 |
| SmlI | CTYRAG | 8 cut(s) | 122, 354, 668, 964, 1969, 2075, 2291, 2354 |
| SmoI | CTYRAG | 8 cut(s) | 122, 354, 668, 964, 1969, 2075, 2291, 2354 |
| SnaBI | TACGTA | 1 cut(s) | 2256 |
| SpeI | ACTAGT | 1 cut(s) | 650 |
| SsiI | CCGC | 4 cut(s) | 497, 571, 865, 2451 |
| SspMI | CTAG | 7 cut(s) | 554, 651, 776, 1142, 1988, 2141, 2181 |
| StyD4I | CCNGG | 4 cut(s) | 72, 506, 768, 2407 |
| TaaI | ACNGT | 4 cut(s) | 396, 466, 520, 562 |
| TaiI | ACGT | 1 cut(s) | 2258 |
| TaqI | TCGA | 8 cut(s) | 191, 365, 522, 1008, 1363, 1371, 2133, 2376 |
| TatI | WGTACW | 1 cut(s) | 1463 |
| TscAI | CASTG | 3 cut(s) | 469, 648, 1911 |
| TseFI | GTSAC | 4 cut(s) | 1320, 1435, 2217, 2285 |
| TseI | GCWGC | 3 cut(s) | 230, 604, 1307 |
| Tsp45I | GTSAC | 4 cut(s) | 1320, 1435, 2217, 2285 |
| TspGWI | ACGGA | 3 cut(s) | 1115, 1454, 1579 |
| TspRI | CASTG | 3 cut(s) | 469, 648, 1911 |
| Tth111I | GACNNNGTC | 2 cut(s) | 508, 2102 |
| Vha464I | CTTAAG | 2 cut(s) | 964, 2075 |
| VpaK11BI | GGWCC | 2 cut(s) | 510, 697 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2294 |
| XapI | RAATTY | 6 cut(s) | 710, 1093, 1191, 1774, 1884, 2176 |
| XbaI | TCTAGA | 2 cut(s) | 553, 2140 |
| XceI | RCATGY | 3 cut(s) | 976, 1676, 2197 |
| XspI | CTAG | 7 cut(s) | 554, 651, 776, 1142, 1988, 2141, 2181 |