WPP domain-associated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1204 |
| Acc16I | TGCGCA | 1 cut(s) | 12 |
| Acc36I | ACCTGC | 1 cut(s) | 1204 |
| AccI | GTMKAC | 1 cut(s) | 1318 |
| AccII | CGCG | 1 cut(s) | 1386 |
| AccIII | TCCGGA | 1 cut(s) | 1535 |
| AciI | CCGC | 5 cut(s) | 1067, 1289, 1335, 1384, 1386 |
| AclWI | GGATC | 2 cut(s) | 1158, 1476 |
| AcoI | YGGCCR | 1 cut(s) | 1375 |
| AcsI | RAATTY | 4 cut(s) | 126, 140, 502, 749 |
| AcuI | CTGAAG | 1 cut(s) | 111 |
| AfaI | GTAC | 4 cut(s) | 115, 402, 897, 920 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1368, 1369, 1408, 1535 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 12, 44, 627, 659 |
| Alw21I | GWGCWC | 2 cut(s) | 1369, 1399 |
| Alw26I | GTCTC | 4 cut(s) | 509, 1127, 1242, 1395 |
| AlwI | GGATC | 2 cut(s) | 1158, 1476 |
| Ama87I | CYCGRG | 2 cut(s) | 1368, 1392 |
| Aor13HI | TCCGGA | 1 cut(s) | 1535 |
| AoxI | GGCC | 4 cut(s) | 1356, 1375, 1381, 1509 |
| ApeKI | GCWGC | 4 cut(s) | 443, 485, 566, 650 |
| ApoI | RAATTY | 4 cut(s) | 126, 140, 502, 749 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 791 |
| AspLEI | GCGC | 3 cut(s) | 13, 251, 1107 |
| AspS9I | GGNCC | 3 cut(s) | 1303, 1357, 1510 |
| AsuC2I | CCSGG | 2 cut(s) | 1171, 1332 |
| AsuHPI | GGTGA | 4 cut(s) | 44, 524, 1000, 1138 |
| AsuII | TTCGAA | 1 cut(s) | 720 |
| AvaI | CYCGRG | 2 cut(s) | 1368, 1392 |
| AvaII | GGWCC | 1 cut(s) | 1303 |
| BauI | CACGAG | 2 cut(s) | 435, 819 |
| Bbv12I | GWGCWC | 2 cut(s) | 1369, 1399 |
| BbvCI | CCTCAGC | 1 cut(s) | 675 |
| BbvI | GCAGC | 4 cut(s) | 455, 472, 553, 662 |
| BccI | CCATC | 5 cut(s) | 218, 325, 1013, 1048, 1526 |
| BciVI | GTATCC | 1 cut(s) | 193 |
| BcnI | CCSGG | 2 cut(s) | 1171, 1332 |
| BcoDI | GTCTC | 4 cut(s) | 509, 1127, 1242, 1395 |
| BfoI | RGCGCY | 2 cut(s) | 252, 1108 |
| BfuAI | ACCTGC | 1 cut(s) | 1204 |
| BfuI | GTATCC | 1 cut(s) | 193 |
| BisI | GCNGC | 5 cut(s) | 444, 486, 567, 651, 1384 |
| BlpI | GCTNAGC | 1 cut(s) | 740 |
| BlsI | GCNGC | 5 cut(s) | 445, 487, 568, 652, 1385 |
| BmcAI | AGTACT | 2 cut(s) | 115, 402 |
| Bme1390I | CCNGG | 2 cut(s) | 1171, 1332 |
| Bme18I | GGWCC | 1 cut(s) | 1303 |
| BmeT110I | CYCGRG | 2 cut(s) | 1368, 1392 |
| BmgT120I | GGNCC | 3 cut(s) | 1303, 1357, 1510 |
| BmiI | GGNNCC | 1 cut(s) | 1359 |
| BmrFI | CCNGG | 2 cut(s) | 1171, 1332 |
| BmrI | ACTGGG | 1 cut(s) | 1524 |
| BmsI | GCATC | 1 cut(s) | 430 |
| BmuI | ACTGGG | 1 cut(s) | 1524 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 962, 994 |
| Bpu10I | CCTNAGC | 1 cut(s) | 675 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 740 |
| Bpu14I | TTCGAA | 1 cut(s) | 720 |
| BpuEI | CTTGAG | 2 cut(s) | 474, 974 |
| BpuMI | CCSGG | 2 cut(s) | 1171, 1332 |
| BsaBI | GATNNNNATC | 1 cut(s) | 687 |
| BsaI | GGTCTC | 2 cut(s) | 1242, 1395 |
| BsaJI | CCNNGG | 3 cut(s) | 1169, 1378, 1384 |
| BsaWI | WCCGGW | 1 cut(s) | 1535 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 639, 669 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1368, 1369, 1408, 1535 |
| Bse1I | ACTGG | 2 cut(s) | 936, 1530 |
| Bse8I | GATNNNNATC | 1 cut(s) | 687 |
| BseAI | TCCGGA | 1 cut(s) | 1535 |
| BseDI | CCNNGG | 3 cut(s) | 1169, 1378, 1384 |
| BseGI | GGATG | 1 cut(s) | 76 |
| BseJI | GATNNNNATC | 1 cut(s) | 687 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1368, 1369, 1408, 1535 |
| BseMII | CTCAG | 5 cut(s) | 666, 960, 1096, 1214, 1488 |
| BseNI | ACTGG | 2 cut(s) | 936, 1530 |
| BseRI | GAGGAG | 4 cut(s) | 281, 991, 1218, 1287 |
| BseXI | GCAGC | 4 cut(s) | 455, 472, 553, 662 |
| Bsh1236I | CGCG | 1 cut(s) | 1386 |
| BshFI | GGCC | 4 cut(s) | 1358, 1377, 1383, 1511 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1369, 1399 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1368, 1392 |
| BsiSI | CCGG | 3 cut(s) | 1171, 1332, 1536 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1368, 1369, 1408, 1535 |
| BsmAI | GTCTC | 4 cut(s) | 509, 1127, 1242, 1395 |
| BsmI | GAATGC | 2 cut(s) | 84, 265 |
| BsnI | GGCC | 4 cut(s) | 1358, 1377, 1383, 1511 |
| Bso31I | GGTCTC | 2 cut(s) | 1242, 1395 |
| BsoBI | CYCGRG | 2 cut(s) | 1368, 1392 |
| Bsp119I | TTCGAA | 1 cut(s) | 720 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1369, 1399 |
| Bsp13I | TCCGGA | 1 cut(s) | 1535 |
| Bsp1407I | TGTACA | 1 cut(s) | 918 |
| Bsp143I | GATC | 4 cut(s) | 1121, 1150, 1468, 1500 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 740 |
| BspACI | CCGC | 5 cut(s) | 1067, 1289, 1335, 1384, 1386 |
| BspANI | GGCC | 4 cut(s) | 1358, 1377, 1383, 1511 |
| BspCNI | CTCAG | 5 cut(s) | 667, 961, 1095, 1213, 1489 |
| BspEI | TCCGGA | 1 cut(s) | 1535 |
| BspFNI | CGCG | 1 cut(s) | 1386 |
| BspHI | TCATGA | 1 cut(s) | 157 |
| BspLI | GGNNCC | 1 cut(s) | 1359 |
| BspMI | ACCTGC | 1 cut(s) | 1204 |
| BspPI | GGATC | 2 cut(s) | 1158, 1476 |
| BspT104I | TTCGAA | 1 cut(s) | 720 |
| BspTNI | GGTCTC | 2 cut(s) | 1242, 1395 |
| BsrGI | TGTACA | 1 cut(s) | 918 |
| BsrI | ACTGG | 2 cut(s) | 936, 1530 |
| BssECI | CCNNGG | 3 cut(s) | 1169, 1378, 1384 |
| BssMI | GATC | 4 cut(s) | 1121, 1150, 1468, 1500 |
| BssSI | CACGAG | 2 cut(s) | 435, 819 |
| Bst2BI | CACGAG | 2 cut(s) | 435, 819 |
| Bst4CI | ACNGT | 5 cut(s) | 1075, 1138, 1411, 1417, 1435 |
| Bst6I | CTCTTC | 1 cut(s) | 87 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 440, 449 |
| BstAUI | TGTACA | 1 cut(s) | 918 |
| BstBI | TTCGAA | 1 cut(s) | 720 |
| BstC8I | GCNNGC | 3 cut(s) | 672, 1109, 1399 |
| BstDEI | CTNAG | 7 cut(s) | 117, 675, 740, 969, 1082, 1200, 1497 |
| BstDSI | CCRYGG | 1 cut(s) | 1384 |
| BstF5I | GGATG | 1 cut(s) | 76 |
| BstFNI | CGCG | 1 cut(s) | 1386 |
| BstH2I | RGCGCY | 2 cut(s) | 252, 1108 |
| BstHHI | GCGC | 3 cut(s) | 13, 251, 1107 |
| BstKTI | GATC | 4 cut(s) | 1124, 1153, 1471, 1503 |
| BstMAI | GTCTC | 4 cut(s) | 509, 1127, 1242, 1395 |
| BstMBI | GATC | 4 cut(s) | 1121, 1150, 1468, 1500 |
| BstSCI | CCNGG | 2 cut(s) | 1169, 1330 |
| BstUI | CGCG | 1 cut(s) | 1386 |
| BstV1I | GCAGC | 4 cut(s) | 455, 472, 553, 662 |
| BstX2I | RGATCY | 1 cut(s) | 1468 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1300 |
| BstYI | RGATCY | 1 cut(s) | 1468 |
| BsuI | GTATCC | 1 cut(s) | 193 |
| BsuRI | GGCC | 4 cut(s) | 1358, 1377, 1383, 1511 |
| BtgI | CCRYGG | 1 cut(s) | 1384 |
| BtsCI | GGATG | 1 cut(s) | 76 |
| BtsI | GCAGTG | 1 cut(s) | 660 |
| BtsIMutI | CAGTG | 4 cut(s) | 660, 795, 1071, 1422 |
| BveI | ACCTGC | 1 cut(s) | 1204 |
| Cac8I | GCNNGC | 3 cut(s) | 672, 1109, 1399 |
| CciI | TCATGA | 1 cut(s) | 157 |
| CfoI | GCGC | 3 cut(s) | 13, 251, 1107 |
| Cfr13I | GGNCC | 3 cut(s) | 1303, 1357, 1510 |
| Cfr42I | CCGCGG | 1 cut(s) | 1387 |
| Csp6I | GTAC | 4 cut(s) | 114, 401, 896, 919 |
| CviAII | CATG | 3 cut(s) | 122, 158, 1280 |
| CviQI | GTAC | 4 cut(s) | 114, 401, 896, 919 |
| DdeI | CTNAG | 7 cut(s) | 117, 675, 740, 969, 1082, 1200, 1497 |
| DpnI | GATC | 4 cut(s) | 1123, 1152, 1470, 1502 |
| DpnII | GATC | 4 cut(s) | 1121, 1150, 1468, 1500 |
| DraI | TTTAAA | 1 cut(s) | 1116 |
| EaeI | YGGCCR | 1 cut(s) | 1375 |
| Eam1104I | CTCTTC | 1 cut(s) | 87 |
| EarI | CTCTTC | 1 cut(s) | 87 |
| EciI | GGCGGA | 1 cut(s) | 1278 |
| Eco31I | GGTCTC | 2 cut(s) | 1242, 1395 |
| Eco47I | GGWCC | 1 cut(s) | 1303 |
| Eco57I | CTGAAG | 1 cut(s) | 111 |
| Eco88I | CYCGRG | 2 cut(s) | 1368, 1392 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1510 |
| EcoT22I | ATGCAT | 1 cut(s) | 86 |
| FaeI | CATG | 3 cut(s) | 125, 161, 1283 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 153, 185, 387, 419, 844, 876, 1227, 1259 |
| FatI | CATG | 3 cut(s) | 121, 157, 1279 |
| FauI | CCCGC | 2 cut(s) | 1074, 1379 |
| FauNDI | CATATG | 1 cut(s) | 623 |
| FblI | GTMKAC | 1 cut(s) | 1318 |
| Fnu4HI | GCNGC | 5 cut(s) | 444, 486, 567, 651, 1384 |
| FokI | GGATG | 1 cut(s) | 83 |
| Fsp4HI | GCNGC | 5 cut(s) | 444, 486, 567, 651, 1384 |
| FspAI | RTGCGCAY | 1 cut(s) | 12 |
| FspI | TGCGCA | 1 cut(s) | 12 |
| GlaI | GCGC | 3 cut(s) | 12, 250, 1106 |
| GluI | GCNGC | 5 cut(s) | 444, 486, 567, 651, 1384 |
| HaeII | RGCGCY | 2 cut(s) | 252, 1108 |
| HaeIII | GGCC | 4 cut(s) | 1358, 1377, 1383, 1511 |
| HapII | CCGG | 3 cut(s) | 1171, 1332, 1536 |
| HhaI | GCGC | 3 cut(s) | 13, 251, 1107 |
| Hin1II | CATG | 3 cut(s) | 125, 161, 1283 |
| Hin6I | GCGC | 3 cut(s) | 11, 249, 1105 |
| HinP1I | GCGC | 3 cut(s) | 11, 249, 1105 |
| HincII | GTYRAC | 2 cut(s) | 524, 1319 |
| HindII | GTYRAC | 2 cut(s) | 524, 1319 |
| HindIII | AAGCTT | 3 cut(s) | 21, 150, 641 |
| HinfI | GANTC | 5 cut(s) | 95, 206, 755, 1185, 1480 |
| HpaII | CCGG | 3 cut(s) | 1171, 1332, 1536 |
| HphI | GGTGA | 4 cut(s) | 44, 524, 1000, 1138 |
| Hpy166II | GTNNAC | 4 cut(s) | 524, 795, 1319, 1340 |
| Hpy188I | TCNGA | 7 cut(s) | 531, 544, 832, 949, 1048, 1203, 1498 |
| Hpy188III | TCNNGA | 5 cut(s) | 89, 158, 491, 1392, 1536 |
| Hpy8I | GTNNAC | 4 cut(s) | 524, 795, 1319, 1340 |
| Hpy99I | CGWCG | 2 cut(s) | 1311, 1320 |
| HpyCH4III | ACNGT | 5 cut(s) | 1075, 1138, 1411, 1417, 1435 |
| HpyCH4IV | ACGT | 1 cut(s) | 181 |
| HpyCH4V | TGCA | 7 cut(s) | 84, 263, 325, 374, 443, 452, 569 |
| HpyF3I | CTNAG | 7 cut(s) | 117, 675, 740, 969, 1082, 1200, 1497 |
| HpySE526I | ACGT | 1 cut(s) | 181 |
| Hsp92II | CATG | 3 cut(s) | 125, 161, 1283 |
| HspAI | GCGC | 3 cut(s) | 11, 249, 1105 |
| Kpn2I | TCCGGA | 1 cut(s) | 1535 |
| KspI | CCGCGG | 1 cut(s) | 1387 |
| Kzo9I | GATC | 4 cut(s) | 1121, 1150, 1468, 1500 |
| LmnI | GCTCC | 6 cut(s) | 424, 595, 647, 736, 1102, 1195 |
| Lsp1109I | GCAGC | 4 cut(s) | 455, 472, 553, 662 |
| LweI | GCATC | 1 cut(s) | 430 |
| MaeII | ACGT | 1 cut(s) | 181 |
| MaeIII | GTNAC | 4 cut(s) | 96, 814, 1411, 1417 |
| MalI | GATC | 4 cut(s) | 1123, 1152, 1470, 1502 |
| MboI | GATC | 4 cut(s) | 1121, 1150, 1468, 1500 |
| MboII | GAAGA | 9 cut(s) | 17, 47, 104, 203, 268, 428, 692, 1250, 1463 |
| MflI | RGATCY | 1 cut(s) | 1468 |
| MhlI | GDGCHC | 2 cut(s) | 1369, 1399 |
| MlyI | GAGTC | 3 cut(s) | 104, 215, 1474 |
| MmeI | TCCRAC | 1 cut(s) | 573 |
| Mph1103I | ATGCAT | 1 cut(s) | 86 |
| MroI | TCCGGA | 1 cut(s) | 1535 |
| MroXI | GAANNNNTTC | 1 cut(s) | 791 |
| MseI | TTAA | 8 cut(s) | 26, 78, 291, 506, 879, 1115, 1143, 1543 |
| MslI | CAYNNNNRTG | 1 cut(s) | 626 |
| MspA1I | CMGCKG | 1 cut(s) | 1386 |
| MspI | CCGG | 3 cut(s) | 1171, 1332, 1536 |
| MspR9I | CCNGG | 2 cut(s) | 1171, 1332 |
| Mva1269I | GAATGC | 2 cut(s) | 84, 265 |
| MvnI | CGCG | 1 cut(s) | 1386 |
| NciI | CCSGG | 2 cut(s) | 1171, 1332 |
| NdeI | CATATG | 1 cut(s) | 623 |
| NdeII | GATC | 4 cut(s) | 1121, 1150, 1468, 1500 |
| NlaIII | CATG | 3 cut(s) | 125, 161, 1283 |
| NlaIV | GGNNCC | 1 cut(s) | 1359 |
| NmeAIII | GCCGAG | 1 cut(s) | 1403 |
| NmuCI | GTSAC | 4 cut(s) | 96, 814, 1411, 1417 |
| NsbI | TGCGCA | 1 cut(s) | 12 |
| NsiI | ATGCAT | 1 cut(s) | 86 |
| NspV | TTCGAA | 1 cut(s) | 720 |
| PaeR7I | CTCGAG | 1 cut(s) | 1392 |
| PagI | TCATGA | 1 cut(s) | 157 |
| PaqCI | CACCTGC | 1 cut(s) | 1204 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 1171, 1315, 1321, 1375 |
| PctI | GAATGC | 2 cut(s) | 84, 265 |
| PdmI | GAANNNNTTC | 1 cut(s) | 791 |
| PfeI | GAWTC | 2 cut(s) | 755, 1185 |
| PkrI | GCNGC | 5 cut(s) | 445, 487, 568, 652, 1385 |
| PleI | GAGTC | 3 cut(s) | 103, 214, 1474 |
| PpsI | GAGTC | 3 cut(s) | 103, 214, 1474 |
| PspN4I | GGNNCC | 1 cut(s) | 1359 |
| PspPI | GGNCC | 3 cut(s) | 1303, 1357, 1510 |
| PsuI | RGATCY | 1 cut(s) | 1468 |
| RsaI | GTAC | 4 cut(s) | 115, 402, 897, 920 |
| RsaNI | GTAC | 4 cut(s) | 114, 401, 896, 919 |
| RseI | CAYNNNNRTG | 1 cut(s) | 626 |
| SacII | CCGCGG | 1 cut(s) | 1387 |
| SalI | GTCGAC | 1 cut(s) | 1317 |
| SaqAI | TTAA | 8 cut(s) | 26, 78, 291, 506, 879, 1115, 1143, 1543 |
| SatI | GCNGC | 5 cut(s) | 444, 486, 567, 651, 1384 |
| Sau3AI | GATC | 4 cut(s) | 1121, 1150, 1468, 1500 |
| Sau96I | GGNCC | 3 cut(s) | 1303, 1357, 1510 |
| ScaI | AGTACT | 2 cut(s) | 115, 402 |
| SchI | GAGTC | 3 cut(s) | 104, 215, 1474 |
| ScrFI | CCNGG | 2 cut(s) | 1171, 1332 |
| SduI | GDGCHC | 2 cut(s) | 1369, 1399 |
| SfaNI | GCATC | 1 cut(s) | 430 |
| Sfr274I | CTCGAG | 1 cut(s) | 1392 |
| Sfr303I | CCGCGG | 1 cut(s) | 1387 |
| SfuI | TTCGAA | 1 cut(s) | 720 |
| SgrBI | CCGCGG | 1 cut(s) | 1387 |
| SinI | GGWCC | 1 cut(s) | 1303 |
| SlaI | CTCGAG | 1 cut(s) | 1392 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 626 |
| SmlI | CTYRAG | 3 cut(s) | 489, 953, 1392 |
| SmoI | CTYRAG | 3 cut(s) | 489, 953, 1392 |
| SsiI | CCGC | 5 cut(s) | 1067, 1289, 1335, 1384, 1386 |
| StyD4I | CCNGG | 2 cut(s) | 1169, 1330 |
| TaaI | ACNGT | 5 cut(s) | 1075, 1138, 1411, 1417, 1435 |
| TaiI | ACGT | 1 cut(s) | 184 |
| TaqI | TCGA | 8 cut(s) | 720, 842, 1153, 1183, 1267, 1318, 1324, 1393 |
| TatI | WGTACW | 4 cut(s) | 113, 400, 895, 918 |
| TauI | GCSGC | 1 cut(s) | 1386 |
| TfiI | GAWTC | 2 cut(s) | 755, 1185 |
| Tru1I | TTAA | 8 cut(s) | 26, 78, 291, 506, 879, 1115, 1143, 1543 |
| Tru9I | TTAA | 8 cut(s) | 26, 78, 291, 506, 879, 1115, 1143, 1543 |
| TscAI | CASTG | 4 cut(s) | 660, 802, 1078, 1422 |
| TseFI | GTSAC | 4 cut(s) | 96, 814, 1411, 1417 |
| TseI | GCWGC | 4 cut(s) | 443, 485, 566, 650 |
| Tsp45I | GTSAC | 4 cut(s) | 96, 814, 1411, 1417 |
| TspDTI | ATGAA | 6 cut(s) | 138, 174, 324, 492, 618, 1080 |
| TspGWI | ACGGA | 3 cut(s) | 218, 764, 1295 |
| TspRI | CASTG | 4 cut(s) | 660, 802, 1078, 1422 |
| VpaK11BI | GGWCC | 1 cut(s) | 1303 |
| XapI | RAATTY | 4 cut(s) | 126, 140, 502, 749 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 184 |
| XhoI | CTCGAG | 1 cut(s) | 1392 |
| XmiI | GTMKAC | 1 cut(s) | 1318 |
| XmnI | GAANNNNTTC | 1 cut(s) | 791 |
| ZrmI | AGTACT | 2 cut(s) | 115, 402 |
| Zsp2I | ATGCAT | 1 cut(s) | 86 |