FvH4_3g10170

WPP domain-associated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0001383
Physical Location & Seq
Reverse (-)
5918310 .. 5925171
6862 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g10170.t3

Sequence Viewer

Length: 2811 bp
ATGGAGAGTTTGGAAGTCATGGAGAATGGTGTTGGATCGTGCAATGGTGGGATGGAGCAGCTGGAGGTTATGCATAATGGTGTTGAAAAGTGCAACGGTGGGATGGAGCAGCTTAGCAATGGTGTGAAAGAAAGTGATCATCTGGGTGTTGACATTCTTGAGGATTTGGAGTCTTACATGCAAGATATTAATGACCGGTTGACCATATCGAGGATGGTGAGTGACTCGGTCATCAAGGGTATGGTGACTGCAGTGACAGAAGAGGCAGCTGAGGAAATTGCTCAGAAAGAACGAGAGGTGACTAAATTGAAGGAAATGTTGCATGTTCATCACGTGGGTGTTGATGAGAACGAATTCTCAGGGTCTTCAATAATGCCCCGATTGCCAACAGGTACCCAACATGGACTTACTCCTATAGGTAGCAGAGATGGAATTCAGCAGCCTAGTGCCCTTGAAGCTTTTTCTGGGCATGATAGAATAGCAGAAACTTTGGTCCACTTAAGAGGTACTACTAACAAGGAATTCAAGAAGCTCAAAAAAGAAATTGATAGCATAAGAATGCGTAGTTCAATGAAGAGGATTAGTTTCGGTTCAGGTTTGGGTGACATACTGCAAGATAAAGTATCTGACAAGTGGGATGTGGAAAGAACCTTGGATAGTCTGAAGACTACAATAGAAAGTGTCTATCAACAGGTGGAAGAAATGATTCACTTGTCAAAGACATCAGTATATGAGTGGCAGCTGGAGCAGGAGTTTAAAGCAAAAATTGAAGCAGAAATTGAAGCACTTGTGATGAGTAATTGTATTTGGACCGTTGGAGGAAACATGAGGGATTCCTTTTGTGATGTAAAAACTGTGAACTGGGATGGAAAGATGAAAGAGATATCAGGTATACGTGATGAACTAGATGCTATTTCTAAATCACTATCTGTCTCTGACAATGGGCAGCTATCTTCTCATGGATCCTTGGAAGGTGAAGAAGAGAGTAGCAATGGTAAAAAGGGTGCCGGTTCACACCGCAACGTATTGAACTATCTTAAATCAGCATCATCATTACCATCAACAATAACAACAGCAGCAGCAACATTATCAGCATCAGCATCAGCATCAGCAGCTTCATCTCTATGGGAAGAAAATGGTATACATGATGAGAAAGAAATTAATATGGAAGAACATTTGGATCCTGTCTTGCTTAAGCATATGAATAAAGAAGAATTGATAAGTCATTGCAAGAATGAGATTACTAAACTGAAGAGAAATCATGAGTTAAAAATACAAGATCTGACCGAGCAGCATTTCAGCTACAGGAGGGAATTGCTGAGAGAAAAGGGACCCTCTCTAACAGTGAAGAAGAATAAGGATTTTGATATGTTGAGAAAGAGAATCTCTGAGGTGATTTCTAAAGTAGATGAAATTCTTGTAGAAAAGGAGGAAGTGGATACATTGCTTCCTCGTACATGTGGCAGCAATGAAGAAAGTCTCACCAGTTTGAAAGATAAAGTGGAATCACTCCTCTCAGAAAACCATCAACTCAGAGATTTGCTCGAGGATAAGAAGAGAGAAATTAAGTGCCTTTCACTACAGATTTCTGAAGCTTCGGAGAACCTGTCACAACACACTCTGGCTGAAGCAAAGTTATTGAATACAGTTGGAAATCTTAAAGCAGCTATGGAAGATGCTCACGTTGAAGCTGTAATTGGTGAAGATCTATTTGCTGGTGTTGTCAGGGAAGTGGTGGATGAGGTCAAACGTATTGCTGAAGAGTCACAGGTGGAAAACAGTATTCTGCATGGAATTTACAAAAGTATATTCGAAGAAGCTTTTCATGATGCTGAACCTGCTAGCAAATGTCAATCGGAAGATTTGAATATGGAGTCCATCATAATGCAAGAACTGTGTGACGTTATGTTCAAAGATGCTTTGAAGGATGCTGAGGAGAAACTCAATGAGCTGAACATCAAGTATATTGATGAATATGAACTTCGGGTTTTGCACGAGATGCAAAAACGAGACAAGGAAAAACAATTAAAAGTAGAGGTTGCAAACAAAGAGAGATTACGGCAAGAAGTACTTATTTTGGTAGAAGAAAAGGAGCAGTTGGCACGAGATGCAGCAGCTGCATTGGCAAACGAAAAAGAACGATATGAATTAGCTGCTCAAGAGGTTATAAATTTAAGGGGTGAGATATGTCAACATCAGAAATTGATTTCAGAAAGCCTTAAAGTTTCAAATGCTGCAAAGCGTGATTTGGTTGAGGCGTTGGAGCAAAATGATAGACACAAGGCAGACATATCTAAGTTAGAACAGAAGCTTGCAGTAGCAGTGAAAGAGTTGAGGCAACTTGAGGAAGATAGAAGGATGCTTCTTGATGTCAACCATGAGAAGCAGATTGCTGAATCTTTGCTTAAAGCAAAAGAGAGGGAGCTGAGTGAGCAATTTGAATCAATAGCTGTCTATGTCAGTGGATTATTGAAATCGTTTACTGATTTTGAATGTCGAGTGACACAAGATATATCGGGGAAATGTTCGAGGTTGAAAAGTTTGACTTCTCAGTCACATGTGCTTAAACAAAAAGCTGATGTACTTGTAAGACGAGGAATGCTGTACAAGCAGAGATTTGAAAAGAAATGTGCTGACCTTGAGAAAGCTGAAGCTGAGGTTGATCTTTTGGGGGATGAGGTGGAGACTCTGTTGAATCTTGTTGAAAAAATATACATTGCCCTTGATCATTATTCACCAATATTGCAGCATTATCCTGGAATAACTGATATCTTGAAGCTGGTGAAAAGGGAATTAAGTCCAGACAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
No domains found.

Protein Analysis

937

Amino Acids

105.77

Weight (kDa)

5.14

Isoelectric Point (pI)

40.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2168
AasI GACNNNNNNGTC 1 cut(s) 2551
Acc36I ACCTGC 1 cut(s) 1846
Acc65I GGTACC 1 cut(s) 392
AccB1I GGYRCC 2 cut(s) 392, 1004
AccI GTMKAC 2 cut(s) 892, 1141
AciI CCGC 1 cut(s) 1018
AclWI GGATC 5 cut(s) 43, 957, 970, 1175, 1188
AcsI RAATTY 6 cut(s) 353, 432, 521, 1413, 1794, 2170
AcuI CTGAAG 6 cut(s) 683, 1271, 1611, 1647, 1779, 2670
AcvI CACGTG 1 cut(s) 334
AfaI GTAC 6 cut(s) 394, 508, 1456, 2070, 2583, 2606
AfiI CCNNNNNNNGG 1 cut(s) 210
AflII CTTAAG 2 cut(s) 499, 1193
AflIII ACRYGT 2 cut(s) 1457, 2557
AgeI ACCGGT 1 cut(s) 195
AjnI CCWGG 1 cut(s) 2755
AjuI GAANNNNNNNTTGG 2 cut(s) 1680, 1712
AleI CACNNNNGTG 1 cut(s) 336
Alw26I GTCTC 4 cut(s) 937, 1484, 2004, 2678
AlwI GGATC 5 cut(s) 43, 957, 970, 1175, 1188
AlwNI CAGNNNCTG 1 cut(s) 2117
Ama87I CYCGRG 1 cut(s) 1544
ApoI RAATTY 6 cut(s) 353, 432, 521, 1413, 1794, 2170
AseI ATTAAT 2 cut(s) 189, 1161
AsiGI ACCGGT 1 cut(s) 195
Asp700I GAANNNNTTC 3 cut(s) 353, 705, 1821
Asp718I GGTACC 1 cut(s) 392
AspS9I GGNCC 3 cut(s) 493, 810, 1331
AsuII TTCGAA 1 cut(s) 1812
AsuNHI GCTAGC 1 cut(s) 1841
AvaI CYCGRG 1 cut(s) 1544
AvaII GGWCC 3 cut(s) 493, 810, 1331
BaeGI GKGCMC 1 cut(s) 451
BamHI GGATCC 2 cut(s) 962, 1180
BanI GGYRCC 2 cut(s) 392, 1004
BauI CACGAG 2 cut(s) 1994, 2103
BbrPI CACGTG 1 cut(s) 334
BbsI GAAGAC 2 cut(s) 357, 671
BbvCI CCTCAGC 3 cut(s) 270, 1932, 2655
BccI CCATC 8 cut(s) 46, 97, 208, 422, 860, 1066, 1533, 1886
BceAI ACGGC 1 cut(s) 2075
BciT130I CCWGG 1 cut(s) 2757
BciVI GTATCC 1 cut(s) 1432
BclI TGATCA 2 cut(s) 136, 2725
BcoDI GTCTC 4 cut(s) 937, 1484, 2004, 2678
BfaI CTAG 3 cut(s) 444, 905, 1842
BfmI CTRYAG 4 cut(s) 249, 414, 1303, 1580
BfrI CTTAAG 2 cut(s) 499, 1193
BfuAI ACCTGC 1 cut(s) 1846
BfuI GTATCC 1 cut(s) 1432
BglII AGATCT 2 cut(s) 1279, 1705
BlpI GCTNAGC 1 cut(s) 113
BmcAI AGTACT 1 cut(s) 2070
Bme1390I CCNGG 1 cut(s) 2757
Bme18I GGWCC 3 cut(s) 493, 810, 1331
BmeT110I CYCGRG 1 cut(s) 1544
BmgT120I GGNCC 3 cut(s) 493, 810, 1331
BmiI GGNNCC 6 cut(s) 394, 964, 1006, 1182, 1332, 1333
BmrFI CCNGG 1 cut(s) 2757
BmrI ACTGGG 1 cut(s) 871
BmtI GCTAGC 1 cut(s) 1845
BmuI ACTGGG 1 cut(s) 871
BpiI GAAGAC 2 cut(s) 357, 671
BplI GAGNNNNNCTC 2 cut(s) 1527, 1559
BpmI CTGGAG 2 cut(s) 83, 764
Bpu10I CCTNAGC 3 cut(s) 270, 1932, 2655
Bpu1102I GCTNAGC 1 cut(s) 113
Bpu14I TTCGAA 1 cut(s) 1812
BpuEI CTTGAG 4 cut(s) 179, 2142, 2363, 2660
BsaAI YACGTR 2 cut(s) 334, 896
BsaJI CCNNGG 2 cut(s) 651, 966
BsaWI WCCGGW 1 cut(s) 195
BsaXI ACNNNNNCTCC 6 cut(s) 737, 767, 1592, 1622, 2675, 2705
Bsc4I CCNNNNNNNGG 1 cut(s) 210
Bse118I RCCGGY 2 cut(s) 195, 1007
Bse1I ACTGG 2 cut(s) 866, 1485
Bse3DI GCAATG 7 cut(s) 49, 124, 997, 1225, 1442, 1474, 2715
BseBI CCWGG 1 cut(s) 2757
BseDI CCNNGG 2 cut(s) 651, 966
BseGI GGATG 9 cut(s) 57, 108, 219, 643, 871, 1744, 1933, 2364, 2680
BseLI CCNNNNNNNGG 1 cut(s) 210
BseMI GCAATG 7 cut(s) 49, 124, 997, 1225, 1442, 1474, 2715
BseNI ACTGG 2 cut(s) 866, 1485
BseRI GAGGAG 2 cut(s) 1502, 1949
BseSI GKGCMC 1 cut(s) 451
BshNI GGYRCC 2 cut(s) 392, 1004
BshTI ACCGGT 1 cut(s) 195
BsiHKCI CYCGRG 1 cut(s) 1544
BsiSI CCGG 2 cut(s) 196, 1008
BslFI GGGAC 1 cut(s) 1344
BslI CCNNNNNNNGG 1 cut(s) 210
BsmAI GTCTC 4 cut(s) 937, 1484, 2004, 2678
BsmFI GGGAC 1 cut(s) 1344
BsmI GAATGC 2 cut(s) 564, 2604
BsoBI CYCGRG 1 cut(s) 1544
Bsp119I TTCGAA 1 cut(s) 1812
Bsp1286I GDGCHC 1 cut(s) 451
Bsp1407I TGTACA 1 cut(s) 2604
Bsp143I GATC 8 cut(s) 35, 136, 962, 1180, 1279, 1705, 2662, 2725
Bsp1720I GCTNAGC 1 cut(s) 113
BspACI CCGC 1 cut(s) 1018
BspHI TCATGA 2 cut(s) 1261, 1825
BspLI GGNNCC 6 cut(s) 394, 964, 1006, 1182, 1332, 1333
BspMAI CTGCAG 1 cut(s) 253
BspMI ACCTGC 1 cut(s) 1846
BspOI GCTAGC 1 cut(s) 1845
BspPI GGATC 5 cut(s) 43, 957, 970, 1175, 1188
BspT104I TTCGAA 1 cut(s) 1812
BspT107I GGYRCC 2 cut(s) 392, 1004
BspTI CTTAAG 2 cut(s) 499, 1193
BsrDI GCAATG 7 cut(s) 49, 124, 997, 1225, 1442, 1474, 2715
BsrFI RCCGGY 2 cut(s) 195, 1007
BsrGI TGTACA 1 cut(s) 2604
BsrI ACTGG 2 cut(s) 866, 1485
BssAI RCCGGY 2 cut(s) 195, 1007
BssECI CCNNGG 2 cut(s) 651, 966
BssMI GATC 8 cut(s) 35, 136, 962, 1180, 1279, 1705, 2662, 2725
BssNAI GTATAC 2 cut(s) 893, 1142
BssSI CACGAG 2 cut(s) 1994, 2103
BssT1I CCWWGG 2 cut(s) 651, 966
Bst1107I GTATAC 2 cut(s) 893, 1142
Bst2BI CACGAG 2 cut(s) 1994, 2103
Bst2UI CCWGG 1 cut(s) 2757
Bst4CI ACNGT 7 cut(s) 98, 814, 856, 1345, 1648, 1781, 1896
Bst6I CTCTTC 6 cut(s) 255, 569, 975, 1247, 1550, 1755
BstAFI CTTAAG 2 cut(s) 499, 1193
BstAPI GCANNNNNTGC 3 cut(s) 1999, 2108, 2117
BstAUI TGTACA 1 cut(s) 2604
BstBAI YACGTR 2 cut(s) 334, 896
BstBI TTCGAA 1 cut(s) 1812
BstC8I GCNNGC 2 cut(s) 1843, 2313
BstF5I GGATG 9 cut(s) 57, 108, 219, 643, 871, 1744, 1933, 2364, 2680
BstKTI GATC 8 cut(s) 38, 139, 965, 1183, 1282, 1708, 2665, 2728
BstMAI GTCTC 4 cut(s) 937, 1484, 2004, 2678
BstMBI GATC 8 cut(s) 35, 136, 962, 1180, 1279, 1705, 2662, 2725
BstNI CCWGG 1 cut(s) 2757
BstNSI RCATGY 4 cut(s) 181, 326, 1461, 2561
BstSCI CCNGG 1 cut(s) 2755
BstSFI CTRYAG 4 cut(s) 249, 414, 1303, 1580
BstSLI GKGCMC 1 cut(s) 451
BstV2I GAAGAC 2 cut(s) 357, 671
BstX2I RGATCY 4 cut(s) 962, 1180, 1279, 1705
BstYI RGATCY 4 cut(s) 962, 1180, 1279, 1705
BstZ17I GTATAC 2 cut(s) 893, 1142
BsuI GTATCC 1 cut(s) 1432
BtsCI GGATG 9 cut(s) 57, 108, 219, 643, 871, 1744, 1933, 2364, 2680
BtsI GCAGTG 2 cut(s) 258, 2328
BtsIMutI CAGTG 4 cut(s) 258, 1350, 2328, 2467
BveI ACCTGC 1 cut(s) 1846
Cac8I GCNNGC 2 cut(s) 1843, 2313
CaiI CAGNNNCTG 1 cut(s) 2117
CciI TCATGA 2 cut(s) 1261, 1825
Cfr10I RCCGGY 2 cut(s) 195, 1007
Cfr13I GGNCC 3 cut(s) 493, 810, 1331
Csp6I GTAC 6 cut(s) 393, 507, 1455, 2069, 2582, 2605
CspAI ACCGGT 1 cut(s) 195
CviQI GTAC 6 cut(s) 393, 507, 1455, 2069, 2582, 2605
DpnI GATC 8 cut(s) 37, 138, 964, 1182, 1281, 1707, 2664, 2727
DpnII GATC 8 cut(s) 35, 136, 962, 1180, 1279, 1705, 2662, 2725
DraI TTTAAA 1 cut(s) 757
DrdI GACNNNNNNGTC 1 cut(s) 2551
DseDI GACNNNNNNGTC 1 cut(s) 2551
Eam1104I CTCTTC 6 cut(s) 255, 569, 975, 1247, 1550, 1755
EarI CTCTTC 6 cut(s) 255, 569, 975, 1247, 1550, 1755
Eco130I CCWWGG 2 cut(s) 651, 966
Eco32I GATATC 2 cut(s) 885, 2770
Eco47I GGWCC 3 cut(s) 493, 810, 1331
Eco57I CTGAAG 6 cut(s) 683, 1271, 1611, 1647, 1779, 2670
Eco72I CACGTG 1 cut(s) 334
Eco88I CYCGRG 1 cut(s) 1544
EcoO109I RGGNCCY 1 cut(s) 1331
EcoRI GAATTC 3 cut(s) 353, 432, 521
EcoRII CCWGG 1 cut(s) 2755
EcoRV GATATC 2 cut(s) 885, 2770
EcoT14I CCWWGG 2 cut(s) 651, 966
EcoT22I ATGCAT 1 cut(s) 75
ErhI CCWWGG 2 cut(s) 651, 966
FalI AAGNNNNNCTT 4 cut(s) 2055, 2087, 2530, 2562
FaqI GGGAC 1 cut(s) 1344
FauNDI CATATG 1 cut(s) 1200
FbaI TGATCA 2 cut(s) 136, 2725
FblI GTMKAC 2 cut(s) 892, 1141
FokI GGATG 9 cut(s) 64, 115, 226, 650, 878, 1751, 1940, 2371, 2687
FspBI CTAG 3 cut(s) 444, 905, 1842
GsuI CTGGAG 2 cut(s) 83, 764
HapII CCGG 2 cut(s) 196, 1008
HincII GTYRAC 4 cut(s) 151, 201, 2192, 2374
HindII GTYRAC 4 cut(s) 151, 201, 2192, 2374
HindIII AAGCTT 4 cut(s) 456, 1593, 1818, 2309
HpaII CCGG 2 cut(s) 196, 1008
Hpy188III TCNNGA 8 cut(s) 158, 526, 1262, 1826, 2159, 2366, 2773, 2801
HpyAV CCTTC 4 cut(s) 304, 965, 1918, 2349
HpyCH4III ACNGT 7 cut(s) 98, 814, 856, 1345, 1648, 1781, 1896
HpyCH4IV ACGT 6 cut(s) 333, 895, 1023, 1683, 1750, 1902
HpySE526I ACGT 6 cut(s) 333, 895, 1023, 1683, 1750, 1902
KflI GGGWCCC 1 cut(s) 1331
KpnI GGTACC 1 cut(s) 396
Ksp22I TGATCA 2 cut(s) 136, 2725
Kzo9I GATC 8 cut(s) 35, 136, 962, 1180, 1279, 1705, 2662, 2725
LmnI GCTCC 6 cut(s) 55, 106, 745, 2092, 2263, 2422
MaeI CTAG 3 cut(s) 444, 905, 1842
MaeII ACGT 6 cut(s) 333, 895, 1023, 1683, 1750, 1902
MalI GATC 8 cut(s) 37, 138, 964, 1182, 1281, 1707, 2664, 2727
MboI GATC 8 cut(s) 35, 136, 962, 1180, 1279, 1705, 2662, 2725
MflI RGATCY 4 cut(s) 962, 1180, 1279, 1705
MhlI GDGCHC 1 cut(s) 451
MlyI GAGTC 5 cut(s) 179, 218, 1772, 1883, 2680
MmeI TCCRAC 4 cut(s) 13, 796, 1630, 2241
Mph1103I ATGCAT 1 cut(s) 75
MroXI GAANNNNTTC 3 cut(s) 353, 705, 1821
MslI CAYNNNNRTG 6 cut(s) 78, 144, 336, 557, 1123, 1883
MspA1I CMGCKG 4 cut(s) 61, 269, 742, 2117
MspCI CTTAAG 2 cut(s) 499, 1193
MspI CCGG 2 cut(s) 196, 1008
MspR9I CCNGG 1 cut(s) 2757
Mva1269I GAATGC 2 cut(s) 564, 2604
MvaI CCWGG 1 cut(s) 2757
NdeI CATATG 1 cut(s) 1200
NdeII GATC 8 cut(s) 35, 136, 962, 1180, 1279, 1705, 2662, 2725
NheI GCTAGC 1 cut(s) 1841
NlaIV GGNNCC 6 cut(s) 394, 964, 1006, 1182, 1332, 1333
NsiI ATGCAT 1 cut(s) 75
NspI RCATGY 4 cut(s) 181, 326, 1461, 2561
NspV TTCGAA 1 cut(s) 1812
OliI CACNNNNGTG 1 cut(s) 336
PaeR7I CTCGAG 1 cut(s) 1544
PagI TCATGA 2 cut(s) 1261, 1825
PciI ACATGT 2 cut(s) 1457, 2557
PctI GAATGC 2 cut(s) 564, 2604
PdmI GAANNNNTTC 3 cut(s) 353, 705, 1821
PfeI GAWTC 7 cut(s) 706, 833, 1383, 1505, 2396, 2441, 2695
PflFI GACNNNGTC 1 cut(s) 227
PfoI TCCNGGA 1 cut(s) 2755
PinAI ACCGGT 1 cut(s) 195
PleI GAGTC 5 cut(s) 178, 218, 1771, 1882, 2680
PmaCI CACGTG 1 cut(s) 334
PmlI CACGTG 1 cut(s) 334
PpsI GAGTC 5 cut(s) 178, 218, 1771, 1882, 2680
Ppu21I YACGTR 2 cut(s) 334, 896
PpuMI RGGWCCY 1 cut(s) 1331
PscI ACATGT 2 cut(s) 1457, 2557
PshBI ATTAAT 2 cut(s) 189, 1161
PsiI TTATAA 1 cut(s) 2168
Psp5II RGGWCCY 1 cut(s) 1331
Psp6I CCWGG 1 cut(s) 2755
PspCI CACGTG 1 cut(s) 334
PspGI CCWGG 1 cut(s) 2755
PspN4I GGNNCC 6 cut(s) 394, 964, 1006, 1182, 1332, 1333
PspPI GGNCC 3 cut(s) 493, 810, 1331
PspPPI RGGWCCY 1 cut(s) 1331
PspXI VCTCGAGB 1 cut(s) 1544
PstI CTGCAG 1 cut(s) 253
PstNI CAGNNNCTG 1 cut(s) 2117
PsuI RGATCY 4 cut(s) 962, 1180, 1279, 1705
PsyI GACNNNGTC 1 cut(s) 227
PvuII CAGCTG 4 cut(s) 61, 269, 742, 2117
RsaI GTAC 6 cut(s) 394, 508, 1456, 2070, 2583, 2606
RsaNI GTAC 6 cut(s) 393, 507, 1455, 2069, 2582, 2605
RseI CAYNNNNRTG 6 cut(s) 78, 144, 336, 557, 1123, 1883
Sau3AI GATC 8 cut(s) 35, 136, 962, 1180, 1279, 1705, 2662, 2725
Sau96I GGNCC 3 cut(s) 493, 810, 1331
ScaI AGTACT 1 cut(s) 2070
SchI GAGTC 5 cut(s) 179, 218, 1772, 1883, 2680
ScrFI CCNGG 1 cut(s) 2757
SduI GDGCHC 1 cut(s) 451
SfcI CTRYAG 4 cut(s) 249, 414, 1303, 1580
Sfr274I CTCGAG 1 cut(s) 1544
SfuI TTCGAA 1 cut(s) 1812
SinI GGWCC 3 cut(s) 493, 810, 1331
SlaI CTCGAG 1 cut(s) 1544
SmiMI CAYNNNNRTG 6 cut(s) 78, 144, 336, 557, 1123, 1883
SmlI CTYRAG 7 cut(s) 158, 499, 1193, 1544, 2157, 2342, 2639
SmoI CTYRAG 7 cut(s) 158, 499, 1193, 1544, 2157, 2342, 2639
SsiI CCGC 1 cut(s) 1018
SspI AATATT 1 cut(s) 2742
SspMI CTAG 3 cut(s) 444, 905, 1842
StyD4I CCNGG 1 cut(s) 2755
StyI CCWWGG 2 cut(s) 651, 966
TaaI ACNGT 7 cut(s) 98, 814, 856, 1345, 1648, 1781, 1896
TaiI ACGT 6 cut(s) 336, 898, 1026, 1686, 1753, 1905
TaqI TCGA 5 cut(s) 209, 1545, 1812, 2497, 2528
TaqII GACCGA 2 cut(s) 217, 1301
TatI WGTACW 3 cut(s) 2068, 2581, 2604
TfiI GAWTC 7 cut(s) 706, 833, 1383, 1505, 2396, 2441, 2695
TscAI CASTG 4 cut(s) 258, 1350, 2328, 2467
TspRI CASTG 4 cut(s) 258, 1350, 2328, 2467
Tth111I GACNNNGTC 1 cut(s) 227
Vha464I CTTAAG 2 cut(s) 499, 1193
VpaK11BI GGWCC 3 cut(s) 493, 810, 1331
VspI ATTAAT 2 cut(s) 189, 1161
XapI RAATTY 6 cut(s) 353, 432, 521, 1413, 1794, 2170
XceI RCATGY 4 cut(s) 181, 326, 1461, 2561
XcmI CCANNNNNNNNNTGG 1 cut(s) 211
XhoI CTCGAG 1 cut(s) 1544
XmiI GTMKAC 2 cut(s) 892, 1141
XmnI GAANNNNTTC 3 cut(s) 353, 705, 1821
XspI CTAG 3 cut(s) 444, 905, 1842
ZrmI AGTACT 1 cut(s) 2070
Zsp2I ATGCAT 1 cut(s) 75
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.