Rh5BG123500

WPP domain-associated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0001383
Physical Location & Seq
Reverse (-)
11652046 .. 11684688
32643 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG123500.1

Sequence Viewer

Length: 3162 bp
ATGCCCCAGCTCCCAAAGTCTGCAGGTCGGATAAGATGCCGAAGATTGAGGTCTCCATGCAATTTGGCGTTGATCAAGCTCAAGATCAAGTTATCATTGCCGGAAGCTATGGCGGGTATGAGCAGCGCCGTCAACTCCAATCCAGAGCACCCGGAAACTGCTTTGTTGAAGAAGAAATCGAACCCAGAGATCCGGCTCCATCACCGGATTCAGCTTCTTCACTGCAATTTTGTGAATGTGCATGAGGCTATGGAGCGTTTAAAGGTCATGGATAATGATGTTAAATCATGCAATGGTGGGATGGAGAGTTTACAGGTCATGCGTAATGGTTTTCAATCATGCAATGGTTTGTTGGTGCAGCCTAATTATAGTGTGAAAGAAAGTGAGAATCCGGATGTTGATCTTCTTGAGGATTTGGACTCTTACATGGAAGATATCAACGAACGGTTGACCATATCAAGGATGGTGAGTGACTCGGTCATCAAGGGTATGGTGAATGCAGTAACAGAAGAGGCAGCCGAGAAAATTGCTCAGAAAGAACAAGAGGTGACTAAATTGAAGGAAATGTTACATATTTATCACGTGGGTGTTGATGAGAACGAATTCTCGGGGTCTTTAGTAATGCTCCGAGAGTCTAGAGGTACCCAACACGGACTTACTCATATGGGTAGCAAAGATCGAATGCAGCAGCCTACTTCCCTTGAAGCTGTTGCTGGGCATGATAGAATAGCAGAAACTTTGGTCCACTTAAGAGGGACTACTAATGAGGAATTCAAGAAGCTCAAAAAAGAAATTGATAGCATAAGAGGGCGTAATTCAATGAAGAGGATTAGTTCCAGTTCTGGTTTGGGTGACATACTGCAAGATAAAGTATCTGACAGGTGGGATGTGGATAGAACCTTGGATAGTCTAAAGACTACAATAGAAAGTGTCTGTCAACAGGTGGAAGAAATGGTTCACTTGTCAAAGGCATCAGTATATGAGTGGCAGGTGGAGCAGGAGTTTAAAGAAAAAATTGAAGGAGAAATTGAAGCGCTTGTGATGAGGAATTGTATTTGGAGCGTTGAAGAAAACATGTGGGATTGCTTTTATGGTGCAAAAAATGTGAACTGGGATGGAAGGATCAAAGGGATATCAAGTATACGTGATGAATTAGATGCTATTTCTAAATCACTATCTGTCTCTGACAATGGGCAGCTATCTTCTCATGGATCCTTGGAAGGTGAAGAAGAGAGTAGCAATGGTAAAAAGGGTGCCGGCTCTTACCGCGAGGTATTGAACAATCTTAAATCAGCATCATCATTACCATCAGCAATAACAACAACAGCAACAACATTATCACCATCAGCATCATCATCTTCGTCTCTTTGGGAAGAAAATGGTATACATGATGAGTTAGAAATAAATATGAAAGAACATTTGGATCCTGCCTTGCTTACGCATATGTCAAAAGATGAATTGATAAGCCACTGTAAGAATGAGATTACTAAATTGAAGAGAAACCATGAGTTAAAAATACGAGATCTGACCGAGCAGCATTTCAGCCACAGGAGGGAATTGCTGAGAGAAAGGAGACCCTCTCTAACAGTAAAGAAGAATAAGGAGTTGGATATGTTGAGAAAGAGAATCTCTGAGGTGATTTCTAAAGTAGATGAAATTCTTGTAGAAAAGGGGGAAGTAGCTATATTGCTTCCTCATACATTTGGCAGCAATGAAGAAAGTCTCAGCAGCTTGAAAGATAGAGTGGAATCACTCCTCTCAGAAAACCACCAACTCAGAGATTTGCTTGAGGATAAGAAGAGAGAAATTAAGTGCCTTTCACTACAAGTTTCTGAAGCTGCAGAGAACCTGTCACAACACTCTCTGGCTGAGGCAAAGTTATCGAAAACAGCTGGAAATATTAAAGCAGCTATGGAAGATGCGCGTATTGAAGCTTTAATTGGTGAAGATTTATTTGCTGTTATTGTCAAGGAAGTGGTGGATGAGATTAAATGCATTGCTGAAGAGTCACAGGTGGAGAATAGTATTATGCATGAAATTTACAAAAGCAAATTCAAAGAAGCTTTTCATGAAGCTGAACCTGCTACCATATGTGAATTGGAAGATTTGAATATGGAGTTCATCATCACGCAAGAACTATGTGGTGTTATATTCAAAGATGCTTTGAAGAATGCTGAGGAGAAACTCAATGAACTGAACATTAAATATATCGAGGAATGTGAACTTCGGGTTTTGCAGGAGATGGACAAACGAGAAAAGGAAAAACAATTAGAAGTGGAGGTTGCAAAGAAAGTGAGATTACAGCAAGAAGTACTTTTTCTGGGAGAAGAAAGGGAGCAGTTGGCACGAGATGCAGCAGCTGCATTGGCAAACGAAAAAGAAAGATATGAATTAGCTGCTCAAGAGGTTGAAAATTTAAGGGGTGAGATGTGTCAACATCAGAAATTGATTTCAGAAAGCGTTGAAGAGTCAAATGCTGCAAAGCGTGATTTGGTTGAAGCGTTGGAGCAAAATGAAAGACACAAGGCAGACATATGTAAGTTAGAACAAAAACTTGAAGCAGCAGTGAAAGAGTTGAGGCAAGTTGAGGAAGATAGAAGGAGGCTTCTTGATGTCGACCAAGAGAAGCAGAATGCTGTATCTCTGTTCGAAGCAAAAGAAAGGGAGCTTAGTGAACAATTTGAATCAATAGCTGTCTATGTCAGTGGATTATTGAAAGCGTTTGCTGATTTCGAATGTAGAGTGACACGAGATATTTCAGGAAAATGTTCGAGGTTGAAAAGTTTGACTTCTCAATCACATTTGCTTAAACAAAAAGCTGATGTACTTGTAAGACGAGGATTGCTGTACAAGCAGAGATTTGAAAAGAAATGTTCTGACCTTGAGAAAGCTGAAGCTGAGGTTGATCTTTTGGGGGATGAGGTGGACACTCTGTTGAATCTTGTTGAAAAAATATACATTGCCCTTGATCATTATTCACCAATATTGCAGCATTATCCTGGAGTAAGACACTTTCTTCTATTCCCCGTGATCATGTTAGCTCTATGCGTTCTATATCTTAGGGGACCATGTGCCAGGATGAAAATGTTGGTGTTAGTGGAGATACTATTGCATGTATTTGATATCCATAGAAATATTGGTAGAAATCAATGGAAACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1053

Amino Acids

119.95

Weight (kDa)

5.56

Isoelectric Point (pI)

44.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 979
Acc36I ACCTGC 3 cut(s) 14, 979, 2089
Acc65I GGTACC 1 cut(s) 641
AccB1I GGYRCC 2 cut(s) 641, 1253
AccI GTMKAC 3 cut(s) 1141, 1384, 2616
AccII CGCG 2 cut(s) 1269, 1924
AccIII TCCGGA 1 cut(s) 391
AciI CCGC 2 cut(s) 113, 1267
AclWI GGATC 6 cut(s) 184, 1130, 1206, 1219, 1418, 1431
AcsI RAATTY 6 cut(s) 602, 770, 1656, 2037, 2051, 2413
AcuI CTGAAG 3 cut(s) 1854, 2022, 2913
AcvI CACGTG 1 cut(s) 583
AfaI GTAC 4 cut(s) 643, 2313, 2826, 2849
AfeI AGCGCT 1 cut(s) 1035
AfiI CCNNNNNNNGG 2 cut(s) 459, 1552
AflII CTTAAG 1 cut(s) 748
AflIII ACRYGT 1 cut(s) 1074
AjnI CCWGG 2 cut(s) 2998, 3074
AjuI GAANNNNNNNTTGG 6 cut(s) 1403, 1435, 1589, 1621, 1923, 1955
AleI CACNNNNGTG 1 cut(s) 585
Alw21I GWGCWC 1 cut(s) 150
Alw26I GTCTC 5 cut(s) 57, 1186, 1368, 1567, 1727
AlwI GGATC 6 cut(s) 184, 1130, 1206, 1219, 1418, 1431
AlwNI CAGNNNCTG 1 cut(s) 2360
Ama87I CYCGRG 1 cut(s) 607
Aor13HI TCCGGA 1 cut(s) 391
Aor51HI AGCGCT 1 cut(s) 1035
ApoI RAATTY 6 cut(s) 602, 770, 1656, 2037, 2051, 2413
Asp700I GAANNNNTTC 4 cut(s) 602, 954, 2064, 2767
Asp718I GGTACC 1 cut(s) 641
AspLEI GCGC 3 cut(s) 128, 1036, 1924
AspS9I GGNCC 2 cut(s) 742, 3065
AsuC2I CCSGG 1 cut(s) 152
AsuII TTCGAA 2 cut(s) 2649, 2733
AvaI CYCGRG 1 cut(s) 607
AvaII GGWCC 2 cut(s) 742, 3065
BamHI GGATCC 2 cut(s) 1211, 1423
BanI GGYRCC 2 cut(s) 641, 1253
BauI CACGAG 2 cut(s) 2346, 2748
BbrPI CACGTG 1 cut(s) 583
Bbv12I GWGCWC 1 cut(s) 150
BbvCI CCTCAGC 3 cut(s) 1869, 2175, 2898
BccI CCATC 7 cut(s) 207, 295, 457, 1109, 1315, 1351, 2236
BceAI ACGGC 1 cut(s) 113
BcgI CGANNNNNNTGC 4 cut(s) 509, 543, 1863, 1897
BciT130I CCWGG 2 cut(s) 3000, 3076
BclI TGATCA 3 cut(s) 72, 2968, 3030
BcnI CCSGG 1 cut(s) 152
BcoDI GTCTC 5 cut(s) 57, 1186, 1368, 1567, 1727
BfaI CTAG 1 cut(s) 636
BfmI CTRYAG 2 cut(s) 21, 1839
BfoI RGCGCY 2 cut(s) 129, 1037
BfrI CTTAAG 1 cut(s) 748
BfuAI ACCTGC 3 cut(s) 14, 979, 2089
BglII AGATCT 1 cut(s) 1522
BmcAI AGTACT 1 cut(s) 2313
Bme1390I CCNGG 3 cut(s) 152, 3000, 3076
Bme18I GGWCC 2 cut(s) 742, 3065
BmeT110I CYCGRG 1 cut(s) 607
BmgT120I GGNCC 2 cut(s) 742, 3065
BmiI GGNNCC 6 cut(s) 197, 643, 1213, 1255, 1425, 3066
BmrFI CCNGG 3 cut(s) 152, 3000, 3076
BmrI ACTGGG 1 cut(s) 1120
BmsI GCATC 8 cut(s) 26, 980, 1147, 1304, 1358, 1909, 2149, 2341
BmuI ACTGGG 1 cut(s) 1120
BplI GAGNNNNNCTC 2 cut(s) 1564, 1596
BpmI CTGGAG 1 cut(s) 3021
Bpu10I CCTNAGC 3 cut(s) 1869, 2175, 2898
Bpu14I TTCGAA 2 cut(s) 2649, 2733
BpuEI CTTGAG 5 cut(s) 65, 428, 1808, 2385, 2903
BpuMI CCSGG 1 cut(s) 152
BsaAI YACGTR 2 cut(s) 583, 1145
BsaBI GATNNNNATC 1 cut(s) 399
BsaI GGTCTC 2 cut(s) 57, 1567
BsaJI CCNNGG 2 cut(s) 900, 1215
BsaWI WCCGGW 2 cut(s) 204, 391
BsaXI ACNNNNNCTCC 2 cut(s) 986, 1016
Bsc4I CCNNNNNNNGG 2 cut(s) 459, 1552
Bse118I RCCGGY 1 cut(s) 1256
Bse1I ACTGG 2 cut(s) 837, 1115
Bse3DI GCAATG 7 cut(s) 95, 298, 349, 1246, 1717, 1995, 2958
Bse8I GATNNNNATC 1 cut(s) 399
BseAI TCCGGA 1 cut(s) 391
BseBI CCWGG 2 cut(s) 3000, 3076
BseDI CCNNGG 2 cut(s) 900, 1215
BseGI GGATG 8 cut(s) 306, 400, 468, 892, 1120, 1987, 2923, 3084
BseJI GATNNNNATC 1 cut(s) 399
BseLI CCNNNNNNNGG 2 cut(s) 459, 1552
BseMI GCAATG 7 cut(s) 95, 298, 349, 1246, 1717, 1995, 2958
BseMII CTCAG 9 cut(s) 545, 1553, 1623, 1738, 1773, 1789, 1860, 2166, 2889
BseNI ACTGG 2 cut(s) 837, 1115
BseRI GAGGAG 2 cut(s) 1745, 2192
BseYI CCCAGC 2 cut(s) 6, 713
BsgI GTGCAG 1 cut(s) 377
Bsh1236I CGCG 2 cut(s) 1269, 1924
BshNI GGYRCC 2 cut(s) 641, 1253
BsiHKAI GWGCWC 1 cut(s) 150
BsiHKCI CYCGRG 1 cut(s) 607
BsiSI CCGG 6 cut(s) 101, 152, 193, 205, 392, 1257
BslFI GGGAC 2 cut(s) 769, 3078
BslI CCNNNNNNNGG 2 cut(s) 459, 1552
BsmAI GTCTC 5 cut(s) 57, 1186, 1368, 1567, 1727
BsmBI CGTCTC 1 cut(s) 1368
BsmFI GGGAC 2 cut(s) 769, 3078
BsmI GAATGC 4 cut(s) 502, 687, 2176, 2638
Bso31I GGTCTC 2 cut(s) 57, 1567
BsoBI CYCGRG 1 cut(s) 607
Bsp119I TTCGAA 2 cut(s) 2649, 2733
Bsp1286I GDGCHC 1 cut(s) 150
Bsp13I TCCGGA 1 cut(s) 391
Bsp1407I TGTACA 1 cut(s) 2847
BspACI CCGC 2 cut(s) 113, 1267
BspCNI CTCAG 9 cut(s) 544, 1554, 1624, 1737, 1772, 1788, 1861, 2167, 2890
BspEI TCCGGA 1 cut(s) 391
BspFNI CGCG 2 cut(s) 1269, 1924
BspHI TCATGA 1 cut(s) 2068
BspLI GGNNCC 6 cut(s) 197, 643, 1213, 1255, 1425, 3066
BspMAI CTGCAG 2 cut(s) 25, 1843
BspMI ACCTGC 3 cut(s) 14, 979, 2089
BspPI GGATC 6 cut(s) 184, 1130, 1206, 1219, 1418, 1431
BspT104I TTCGAA 2 cut(s) 2649, 2733
BspT107I GGYRCC 2 cut(s) 641, 1253
BspTI CTTAAG 1 cut(s) 748
BspTNI GGTCTC 2 cut(s) 57, 1567
BsrDI GCAATG 7 cut(s) 95, 298, 349, 1246, 1717, 1995, 2958
BsrFI RCCGGY 1 cut(s) 1256
BsrGI TGTACA 1 cut(s) 2847
BsrI ACTGG 2 cut(s) 837, 1115
BssAI RCCGGY 1 cut(s) 1256
BssECI CCNNGG 2 cut(s) 900, 1215
BssNAI GTATAC 2 cut(s) 1142, 1385
BssSI CACGAG 2 cut(s) 2346, 2748
BssT1I CCWWGG 2 cut(s) 900, 1215
Bst1107I GTATAC 2 cut(s) 1142, 1385
Bst2BI CACGAG 2 cut(s) 2346, 2748
Bst2UI CCWGG 2 cut(s) 3000, 3076
Bst4CI ACNGT 3 cut(s) 447, 1472, 1588
Bst6I CTCTTC 7 cut(s) 504, 818, 1224, 1490, 1793, 1998, 2460
BstAFI CTTAAG 1 cut(s) 748
BstAPI GCANNNNNTGC 2 cut(s) 2351, 2360
BstAUI TGTACA 1 cut(s) 2847
BstBAI YACGTR 2 cut(s) 583, 1145
BstBI TTCGAA 2 cut(s) 2649, 2733
BstC8I GCNNGC 1 cut(s) 1258
BstF5I GGATG 8 cut(s) 306, 400, 468, 892, 1120, 1987, 2923, 3084
BstFNI CGCG 2 cut(s) 1269, 1924
BstH2I RGCGCY 2 cut(s) 129, 1037
BstHHI GCGC 3 cut(s) 128, 1036, 1924
BstMAI GTCTC 5 cut(s) 57, 1186, 1368, 1567, 1727
BstMWI GCNNNNNNNGC 7 cut(s) 994, 1266, 2081, 2351, 2360, 2366, 2851
BstNI CCWGG 2 cut(s) 3000, 3076
BstNSI RCATGY 2 cut(s) 1078, 3116
BstSCI CCNGG 3 cut(s) 150, 2998, 3074
BstSFI CTRYAG 2 cut(s) 21, 1839
BstUI CGCG 2 cut(s) 1269, 1924
BstX2I RGATCY 4 cut(s) 189, 1211, 1423, 1522
BstYI RGATCY 4 cut(s) 189, 1211, 1423, 1522
BstZ17I GTATAC 2 cut(s) 1142, 1385
BtsCI GGATG 8 cut(s) 306, 400, 468, 892, 1120, 1987, 2923, 3084
BtsI GCAGTG 2 cut(s) 220, 2571
BtsIMutI CAGTG 4 cut(s) 220, 1468, 2571, 2710
BveI ACCTGC 3 cut(s) 14, 979, 2089
Cac8I GCNNGC 1 cut(s) 1258
CaiI CAGNNNCTG 1 cut(s) 2360
CciI TCATGA 1 cut(s) 2068
CfoI GCGC 3 cut(s) 128, 1036, 1924
Cfr10I RCCGGY 1 cut(s) 1256
Cfr13I GGNCC 2 cut(s) 742, 3065
Csp6I GTAC 4 cut(s) 642, 2312, 2825, 2848
CviQI GTAC 4 cut(s) 642, 2312, 2825, 2848
DraI TTTAAA 2 cut(s) 261, 1006
Eam1104I CTCTTC 7 cut(s) 504, 818, 1224, 1490, 1793, 1998, 2460
EarI CTCTTC 7 cut(s) 504, 818, 1224, 1490, 1793, 1998, 2460
Eco130I CCWWGG 2 cut(s) 900, 1215
Eco31I GGTCTC 2 cut(s) 57, 1567
Eco32I GATATC 3 cut(s) 436, 1134, 3124
Eco47I GGWCC 2 cut(s) 742, 3065
Eco47III AGCGCT 1 cut(s) 1035
Eco57I CTGAAG 3 cut(s) 1854, 2022, 2913
Eco72I CACGTG 1 cut(s) 583
Eco88I CYCGRG 1 cut(s) 607
EcoRI GAATTC 2 cut(s) 602, 770
EcoRII CCWGG 2 cut(s) 2998, 3074
EcoRV GATATC 3 cut(s) 436, 1134, 3124
EcoT14I CCWWGG 2 cut(s) 900, 1215
EcoT22I ATGCAT 2 cut(s) 1997, 2034
ErhI CCWWGG 2 cut(s) 900, 1215
Esp3I CGTCTC 1 cut(s) 1368
FalI AAGNNNNNCTT 4 cut(s) 2298, 2330, 2773, 2805
FaqI GGGAC 2 cut(s) 769, 3078
FauI CCCGC 1 cut(s) 106
FauNDI CATATG 4 cut(s) 663, 1443, 2090, 2534
FbaI TGATCA 3 cut(s) 72, 2968, 3030
FblI GTMKAC 3 cut(s) 1141, 1384, 2616
FokI GGATG 8 cut(s) 313, 407, 475, 899, 1127, 1994, 2930, 3091
FspBI CTAG 1 cut(s) 636
GlaI GCGC 3 cut(s) 127, 1035, 1923
GsaI CCCAGC 2 cut(s) 10, 717
GsuI CTGGAG 1 cut(s) 3021
HaeII RGCGCY 2 cut(s) 129, 1037
HapII CCGG 6 cut(s) 101, 152, 193, 205, 392, 1257
HhaI GCGC 3 cut(s) 128, 1036, 1924
Hin6I GCGC 3 cut(s) 126, 1034, 1922
HinP1I GCGC 3 cut(s) 126, 1034, 1922
HincII GTYRAC 5 cut(s) 133, 450, 938, 2435, 2617
HindII GTYRAC 5 cut(s) 133, 450, 938, 2435, 2617
HindIII AAGCTT 2 cut(s) 1932, 2061
HpaII CCGG 6 cut(s) 101, 152, 193, 205, 392, 1257
HpyAV CCTTC 5 cut(s) 553, 1013, 1113, 1214, 2592
HpyCH4III ACNGT 3 cut(s) 447, 1472, 1588
HpyCH4IV ACGT 2 cut(s) 582, 1144
HpyF10VI GCNNNNNNNGC 7 cut(s) 994, 1266, 2081, 2351, 2360, 2366, 2851
HpySE526I ACGT 2 cut(s) 582, 1144
HspAI GCGC 3 cut(s) 126, 1034, 1922
Kpn2I TCCGGA 1 cut(s) 391
KpnI GGTACC 1 cut(s) 645
KroI GCCGGC 1 cut(s) 1256
KroNI GCCGGC 1 cut(s) 1258
Ksp22I TGATCA 3 cut(s) 72, 2968, 3030
LmnI GCTCC 9 cut(s) 15, 201, 253, 630, 994, 1059, 2335, 2506, 2665
LweI GCATC 8 cut(s) 26, 980, 1147, 1304, 1358, 1909, 2149, 2341
MaeI CTAG 1 cut(s) 636
MaeII ACGT 2 cut(s) 582, 1144
MaeIII GTNAC 8 cut(s) 470, 502, 547, 567, 851, 1851, 2007, 2743
MflI RGATCY 4 cut(s) 189, 1211, 1423, 1522
MhlI GDGCHC 1 cut(s) 150
MlyI GAGTC 5 cut(s) 413, 467, 641, 2015, 2477
MmeI TCCRAC 3 cut(s) 8, 1587, 2484
Mph1103I ATGCAT 2 cut(s) 1997, 2034
MroI TCCGGA 1 cut(s) 391
MroNI GCCGGC 1 cut(s) 1256
MroXI GAANNNNTTC 4 cut(s) 602, 954, 2064, 2767
MslI CAYNNNNRTG 1 cut(s) 585
MspA1I CMGCKG 2 cut(s) 1892, 2360
MspCI CTTAAG 1 cut(s) 748
MspI CCGG 6 cut(s) 101, 152, 193, 205, 392, 1257
MspR9I CCNGG 3 cut(s) 152, 3000, 3076
Mva1269I GAATGC 4 cut(s) 502, 687, 2176, 2638
MvaI CCWGG 2 cut(s) 3000, 3076
MvnI CGCG 2 cut(s) 1269, 1924
MwoI GCNNNNNNNGC 7 cut(s) 994, 1266, 2081, 2351, 2360, 2366, 2851
NaeI GCCGGC 1 cut(s) 1258
NciI CCSGG 1 cut(s) 152
NdeI CATATG 4 cut(s) 663, 1443, 2090, 2534
NgoMIV GCCGGC 1 cut(s) 1256
NlaIV GGNNCC 6 cut(s) 197, 643, 1213, 1255, 1425, 3066
NmeAIII GCCGAG 1 cut(s) 544
NmuCI GTSAC 6 cut(s) 470, 547, 851, 1851, 2007, 2743
NsiI ATGCAT 2 cut(s) 1997, 2034
NspI RCATGY 2 cut(s) 1078, 3116
NspV TTCGAA 2 cut(s) 2649, 2733
OliI CACNNNNGTG 1 cut(s) 585
PagI TCATGA 1 cut(s) 2068
PaqCI CACCTGC 1 cut(s) 979
PciI ACATGT 1 cut(s) 1074
PctI GAATGC 4 cut(s) 502, 687, 2176, 2638
PdiI GCCGGC 1 cut(s) 1258
PdmI GAANNNNTTC 4 cut(s) 602, 954, 2064, 2767
PfeI GAWTC 6 cut(s) 208, 388, 1626, 1748, 2684, 2938
PflFI GACNNNGTC 1 cut(s) 476
PfoI TCCNGGA 1 cut(s) 2998
PleI GAGTC 5 cut(s) 413, 467, 640, 2014, 2476
PmaCI CACGTG 1 cut(s) 583
PmlI CACGTG 1 cut(s) 583
PpsI GAGTC 5 cut(s) 413, 467, 640, 2014, 2476
Ppu21I YACGTR 2 cut(s) 583, 1145
PscI ACATGT 1 cut(s) 1074
Psp6I CCWGG 2 cut(s) 2998, 3074
PspCI CACGTG 1 cut(s) 583
PspFI CCCAGC 2 cut(s) 6, 713
PspGI CCWGG 2 cut(s) 2998, 3074
PspN4I GGNNCC 6 cut(s) 197, 643, 1213, 1255, 1425, 3066
PspPI GGNCC 2 cut(s) 742, 3065
PstI CTGCAG 2 cut(s) 25, 1843
PstNI CAGNNNCTG 1 cut(s) 2360
PsuI RGATCY 4 cut(s) 189, 1211, 1423, 1522
PsyI GACNNNGTC 1 cut(s) 476
PvuII CAGCTG 2 cut(s) 1892, 2360
RsaI GTAC 4 cut(s) 643, 2313, 2826, 2849
RsaNI GTAC 4 cut(s) 642, 2312, 2825, 2848
RseI CAYNNNNRTG 1 cut(s) 585
SalI GTCGAC 1 cut(s) 2615
Sau96I GGNCC 2 cut(s) 742, 3065
ScaI AGTACT 1 cut(s) 2313
SchI GAGTC 5 cut(s) 413, 467, 641, 2015, 2477
ScrFI CCNGG 3 cut(s) 152, 3000, 3076
SduI GDGCHC 1 cut(s) 150
SfaNI GCATC 8 cut(s) 26, 980, 1147, 1304, 1358, 1909, 2149, 2341
SfcI CTRYAG 2 cut(s) 21, 1839
SfuI TTCGAA 2 cut(s) 2649, 2733
SinI GGWCC 2 cut(s) 742, 3065
SmiMI CAYNNNNRTG 1 cut(s) 585
SmlI CTYRAG 6 cut(s) 80, 407, 748, 1787, 2400, 2882
SmoI CTYRAG 6 cut(s) 80, 407, 748, 1787, 2400, 2882
SsiI CCGC 2 cut(s) 113, 1267
SspI AATATT 3 cut(s) 1900, 2985, 3136
SspMI CTAG 1 cut(s) 636
StyD4I CCNGG 3 cut(s) 150, 2998, 3074
StyI CCWWGG 2 cut(s) 900, 1215
TaaI ACNGT 3 cut(s) 447, 1472, 1588
TaiI ACGT 2 cut(s) 585, 1147
TaqI TCGA 8 cut(s) 179, 679, 1883, 2211, 2616, 2649, 2733, 2771
TaqII GACCGA 2 cut(s) 466, 1544
TatI WGTACW 3 cut(s) 2311, 2824, 2847
TfiI GAWTC 6 cut(s) 208, 388, 1626, 1748, 2684, 2938
TscAI CASTG 4 cut(s) 227, 1475, 2571, 2710
TseFI GTSAC 6 cut(s) 470, 547, 851, 1851, 2007, 2743
Tsp45I GTSAC 6 cut(s) 470, 547, 851, 1851, 2007, 2743
TspGWI ACGGA 1 cut(s) 666
TspRI CASTG 4 cut(s) 227, 1475, 2571, 2710
Tth111I GACNNNGTC 1 cut(s) 476
Vha464I CTTAAG 1 cut(s) 748
VpaK11BI GGWCC 2 cut(s) 742, 3065
XapI RAATTY 6 cut(s) 602, 770, 1656, 2037, 2051, 2413
XbaI TCTAGA 1 cut(s) 635
XceI RCATGY 2 cut(s) 1078, 3116
XcmI CCANNNNNNNNNTGG 4 cut(s) 460, 844, 2095, 3134
XmiI GTMKAC 3 cut(s) 1141, 1384, 2616
XmnI GAANNNNTTC 4 cut(s) 602, 954, 2064, 2767
XspI CTAG 1 cut(s) 636
ZrmI AGTACT 1 cut(s) 2313
Zsp2I ATGCAT 2 cut(s) 1997, 2034
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.