Prupe.6G009000_v2.0.a1

WPP domain-associated

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
701409 .. 704357
2949 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G009000.1

Sequence Viewer

Length: 1545 bp
ATGAGTAACGGTGTTCAATCATGCAATGGAGGGTTGCAGCTTAGCAATGATGTGAAGAAGAATGATAATGGGGATGTTGACCTTGTTGAGGAATTTGATTCTTATTGGCAAGATATCAATTACCGGTTGACCGTGTCTAGGGTGGTGAGTGACACAGTCATCAAGGGTATGGTACAAGAGGCAGCAGAGAAAATTGCTGATAAAGAACTAGAGGTGACTAAATTGAAAGAAATGTTACATGTTTACCATGAGGATGTTGAAAATGAATTCTTGGCGTCTTTAGCAATAAGCCAGGAGTCAAACAGACTTGTTAAACAAGGTACCAAAGACAAGATACATCCTAGCTCTCTTGAAGCTATTTTAGAGTACGATAGAATAGAACAATCTTTGAGCAGCTTAAGAGGAGCAACTAAAGAGGAGTTTAAGAAGCTCGAGGCAGAAATTGATAGCATAAGAGGCAGCTCAGTTAAGATAATTTCTGAGTTGTTGGGTTTGAGTGACATACTGCAACATAAAGTTTCTGACAGATGGGGGATTGGTGTAGATAGGACGCTTAATTGTCTAAAGAGTGCAATAGAAACTGGCTTTCAACAGGTGGAACAAATGGTTCGCTTGTCAAAGGCTGATGTACGTGAGTGGCAACAGGAACAGGAGTTAAAAGCAGAAATTGAAGCATTTGTGATGAGGAATTGCATTTGGAGATTCGAAGAAAAAATTTGGGACCAGTTTTATAGTGATAAAAATGTGAATGGGCATGGAAGGATGAAAGAGTGGATATCAGGTTTACAGCAGGAATTGGACGCCATTTCTATATCACTATCTGTTTCTGACTTTGGGCAGCTATTTTCTCATGTATCTTTGGAAGGTGACGAAGAAAGTAATAATTTTAAGAAGGGAGACCGTCCCCACCGGAAGGTTTTGAACGATCTTAAATCATCATCTCCATCTCCAGCAACATCATCACCAACATCAACATCATCACCATCATCATCATCATCTAGTTGGGAAGAAAATGGCGCGCATGATAAGTCAGAAATAAATATGTCAAGAGATGAACTGATAAATTATTCTAATACTGAGATGACTGAGTTGAAGAGAAATCGTGAGTCTAAAATGCAAGATATGACTGAACAACTGTTCAGCCTCAGGAGGGAATTGTTGAAAGAACGGGGATCTTCTTTGCCATCAAAGAAGAATAAGGAGTTTGACATGCTGAGGAGGAGAATATCTGAGGTTATTTCTAAATTAGATGACATTCTTGTCGAAAATGAGCCAAAAGCTACATTTGGTATCGATGAAGAAAGTCTTAGCCGTTTGAAAGACAGACTGGAATCACTCCTTTCAGAAAACGCCAGCTCAGAGATTTGCTCACAGATAAGAAGAGGGAAATTAAGTGCCTTTCACTACAAGTTTCTGAAGCTGCAGAGAAAATGTCAGAGCACAATGGTGGATCTTCTAGCCAGCTCTTTCTGGCAGAAGCAAAGGAGCGATTGGAACAAGATGCAGCAGCTGCCTTGGAAAAGGATAAGGAGCGATATGAATTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families
No domains found.

Protein Analysis

515

Amino Acids

59.02

Weight (kDa)

5.51

Isoelectric Point (pI)

55.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1259
Acc65I GGTACC 1 cut(s) 320
AccB1I GGYRCC 1 cut(s) 320
AccII CGCG 1 cut(s) 1019
AclWI GGATC 2 cut(s) 1180, 1458
AcsI RAATTY 3 cut(s) 92, 266, 714
AcuI CTGAAG 1 cut(s) 1436
AcyI GRCGYC 2 cut(s) 275, 801
AfaI GTAC 4 cut(s) 174, 322, 368, 630
AfiI CCNNNNNNNGG 4 cut(s) 88, 138, 913, 1150
AflII CTTAAG 1 cut(s) 397
AflIII ACRYGT 1 cut(s) 238
AgeI ACCGGT 1 cut(s) 123
AjnI CCWGG 1 cut(s) 291
AleI CACNNNNGTG 1 cut(s) 1445
Alw21I GWGCWC 1 cut(s) 1442
Alw26I GTCTC 1 cut(s) 891
AlwI GGATC 2 cut(s) 1180, 1458
AlwNI CAGNNNCTG 1 cut(s) 1510
Ama87I CYCGRG 1 cut(s) 431
ApeKI GCWGC 9 cut(s) 37, 182, 393, 459, 838, 1420, 1504, 1507, 1510
ApoI RAATTY 3 cut(s) 92, 266, 714
AsiGI ACCGGT 1 cut(s) 123
Asp718I GGTACC 1 cut(s) 320
AspLEI GCGC 2 cut(s) 1019, 1021
AspS9I GGNCC 1 cut(s) 721
AsuHPI GGTGA 5 cut(s) 157, 226, 878, 954, 972
AsuII TTCGAA 1 cut(s) 705
AvaI CYCGRG 1 cut(s) 431
AvaII GGWCC 1 cut(s) 721
AxyI CCTNAGG 1 cut(s) 1145
BanI GGYRCC 1 cut(s) 320
Bbv12I GWGCWC 1 cut(s) 1442
BbvCI CCTCAGC 1 cut(s) 1214
BbvI GCAGC 9 cut(s) 49, 194, 405, 471, 850, 1407, 1497, 1516, 1519
BccI CCATC 4 cut(s) 522, 952, 991, 1192
BceAI ACGGC 1 cut(s) 1296
BciT130I CCWGG 1 cut(s) 293
BcoDI GTCTC 1 cut(s) 891
BfaI CTAG 5 cut(s) 138, 209, 342, 999, 1457
BfmI CTRYAG 1 cut(s) 1421
BfrI CTTAAG 1 cut(s) 397
BisI GCNGC 9 cut(s) 38, 183, 394, 460, 839, 1421, 1505, 1508, 1511
BlpI GCTNAGC 1 cut(s) 41
BlsI GCNGC 9 cut(s) 39, 184, 395, 461, 840, 1422, 1506, 1509, 1512
Bme1390I CCNGG 1 cut(s) 293
Bme18I GGWCC 1 cut(s) 721
BmeT110I CYCGRG 1 cut(s) 431
BmgT120I GGNCC 1 cut(s) 721
BmiI GGNNCC 2 cut(s) 322, 722
BmrFI CCNGG 1 cut(s) 293
BmsI GCATC 1 cut(s) 1491
BplI GAGNNNNNCTC 2 cut(s) 1352, 1384
BpmI CTGGAG 1 cut(s) 933
Bpu10I CCTNAGC 1 cut(s) 1214
Bpu1102I GCTNAGC 1 cut(s) 41
Bpu14I TTCGAA 1 cut(s) 705
Bsa29I ATCGAT 1 cut(s) 1293
BsaAI YACGTR 1 cut(s) 632
BsaHI GRCGYC 2 cut(s) 275, 801
BsaI GGTCTC 1 cut(s) 891
BsaJI CCNNGG 1 cut(s) 1514
BsaWI WCCGGW 2 cut(s) 123, 909
Bsc4I CCNNNNNNNGG 4 cut(s) 88, 138, 913, 1150
Bse118I RCCGGY 1 cut(s) 123
Bse1I ACTGG 3 cut(s) 586, 724, 1332
Bse21I CCTNAGG 1 cut(s) 1145
Bse3DI GCAATG 2 cut(s) 31, 52
BseBI CCWGG 1 cut(s) 293
BseCI ATCGAT 1 cut(s) 1293
BseDI CCNNGG 1 cut(s) 1514
BseGI GGATG 4 cut(s) 79, 259, 337, 768
BseLI CCNNNNNNNGG 4 cut(s) 88, 138, 913, 1150
BseMI GCAATG 2 cut(s) 31, 52
BseMII CTCAG 8 cut(s) 471, 477, 1068, 1077, 1159, 1205, 1221, 1371
BseNI ACTGG 3 cut(s) 586, 724, 1332
BsePI GCGCGC 1 cut(s) 1017
BseRI GAGGAG 4 cut(s) 417, 431, 1231, 1234
BseXI GCAGC 9 cut(s) 49, 194, 405, 471, 850, 1407, 1497, 1516, 1519
Bsh1236I CGCG 1 cut(s) 1019
BshNI GGYRCC 1 cut(s) 320
BshTI ACCGGT 1 cut(s) 123
BshVI ATCGAT 1 cut(s) 1293
BsiHKAI GWGCWC 1 cut(s) 1442
BsiHKCI CYCGRG 1 cut(s) 431
BsiSI CCGG 2 cut(s) 124, 910
BslFI GGGAC 2 cut(s) 734, 888
BslI CCNNNNNNNGG 4 cut(s) 88, 138, 913, 1150
BsmAI GTCTC 1 cut(s) 891
BsmFI GGGAC 2 cut(s) 734, 888
Bso31I GGTCTC 1 cut(s) 891
BsoBI CYCGRG 1 cut(s) 431
Bsp119I TTCGAA 1 cut(s) 705
Bsp1286I GDGCHC 1 cut(s) 1442
Bsp143I GATC 3 cut(s) 925, 1172, 1450
Bsp1720I GCTNAGC 1 cut(s) 41
BspCNI CTCAG 8 cut(s) 472, 476, 1069, 1078, 1158, 1206, 1222, 1370
BspDI ATCGAT 1 cut(s) 1293
BspFNI CGCG 1 cut(s) 1019
BspLI GGNNCC 2 cut(s) 322, 722
BspMAI CTGCAG 1 cut(s) 1425
BspPI GGATC 2 cut(s) 1180, 1458
BspT104I TTCGAA 1 cut(s) 705
BspT107I GGYRCC 1 cut(s) 320
BspTI CTTAAG 1 cut(s) 397
BspTNI GGTCTC 1 cut(s) 891
BsrDI GCAATG 2 cut(s) 31, 52
BsrFI RCCGGY 1 cut(s) 123
BsrI ACTGG 3 cut(s) 586, 724, 1332
BssAI RCCGGY 1 cut(s) 123
BssECI CCNNGG 1 cut(s) 1514
BssHII GCGCGC 1 cut(s) 1017
BssMI GATC 3 cut(s) 925, 1172, 1450
BssNI GRCGYC 2 cut(s) 275, 801
BssT1I CCWWGG 1 cut(s) 1514
Bst2UI CCWGG 1 cut(s) 293
Bst4CI ACNGT 5 cut(s) 11, 133, 157, 902, 1137
Bst6I CTCTTC 2 cut(s) 1088, 1375
BstACI GRCGYC 2 cut(s) 275, 801
BstAFI CTTAAG 1 cut(s) 397
BstAPI GCANNNNNTGC 1 cut(s) 1510
BstBAI YACGTR 1 cut(s) 632
BstBI TTCGAA 1 cut(s) 705
BstC8I GCNNGC 3 cut(s) 1019, 1354, 1462
BstENI CCTNNNNNAGG 1 cut(s) 86
BstF5I GGATG 4 cut(s) 79, 259, 337, 768
BstFNI CGCG 1 cut(s) 1019
BstHHI GCGC 2 cut(s) 1019, 1021
BstKTI GATC 3 cut(s) 928, 1175, 1453
BstMAI GTCTC 1 cut(s) 891
BstMBI GATC 3 cut(s) 925, 1172, 1450
BstMWI GCNNNNNNNGC 3 cut(s) 281, 456, 1510
BstNI CCWGG 1 cut(s) 293
BstNSI RCATGY 2 cut(s) 242, 1213
BstSCI CCNGG 1 cut(s) 291
BstSFI CTRYAG 1 cut(s) 1421
BstUI CGCG 1 cut(s) 1019
BstV1I GCAGC 9 cut(s) 49, 194, 405, 471, 850, 1407, 1497, 1516, 1519
BstX2I RGATCY 2 cut(s) 1172, 1450
BstYI RGATCY 2 cut(s) 1172, 1450
Bsu15I ATCGAT 1 cut(s) 1293
Bsu36I CCTNAGG 1 cut(s) 1145
BsuTUI ATCGAT 1 cut(s) 1293
BtsCI GGATG 4 cut(s) 79, 259, 337, 768
Cac8I GCNNGC 3 cut(s) 1019, 1354, 1462
CaiI CAGNNNCTG 1 cut(s) 1510
CfoI GCGC 2 cut(s) 1019, 1021
Cfr10I RCCGGY 1 cut(s) 123
Cfr13I GGNCC 1 cut(s) 721
ClaI ATCGAT 1 cut(s) 1293
CseI GACGC 3 cut(s) 264, 559, 809
Csp6I GTAC 4 cut(s) 173, 321, 367, 629
CspAI ACCGGT 1 cut(s) 123
CviAII CATG 7 cut(s) 21, 239, 248, 755, 851, 1022, 1210
CviQI GTAC 4 cut(s) 173, 321, 367, 629
DpnI GATC 3 cut(s) 927, 1174, 1452
DpnII GATC 3 cut(s) 925, 1172, 1450
DrdI GACNNNNNNGTC 1 cut(s) 1259
DseDI GACNNNNNNGTC 1 cut(s) 1259
Eam1104I CTCTTC 2 cut(s) 1088, 1375
EarI CTCTTC 2 cut(s) 1088, 1375
Eco130I CCWWGG 1 cut(s) 1514
Eco31I GGTCTC 1 cut(s) 891
Eco32I GATATC 2 cut(s) 115, 777
Eco47I GGWCC 1 cut(s) 721
Eco57I CTGAAG 1 cut(s) 1436
Eco81I CCTNAGG 1 cut(s) 1145
Eco88I CYCGRG 1 cut(s) 431
EcoNI CCTNNNNNAGG 1 cut(s) 86
EcoRI GAATTC 1 cut(s) 266
EcoRII CCWGG 1 cut(s) 291
EcoRV GATATC 2 cut(s) 115, 777
EcoT14I CCWWGG 1 cut(s) 1514
ErhI CCWWGG 1 cut(s) 1514
FaeI CATG 7 cut(s) 24, 242, 251, 758, 854, 1025, 1213
FalI AAGNNNNNCTT 2 cut(s) 1290, 1322
FaqI GGGAC 2 cut(s) 734, 888
FatI CATG 7 cut(s) 20, 238, 247, 754, 850, 1021, 1209
Fnu4HI GCNGC 9 cut(s) 38, 183, 394, 460, 839, 1421, 1505, 1508, 1511
FokI GGATG 4 cut(s) 86, 266, 324, 775
Fsp4HI GCNGC 9 cut(s) 38, 183, 394, 460, 839, 1421, 1505, 1508, 1511
FspBI CTAG 5 cut(s) 138, 209, 342, 999, 1457
GlaI GCGC 2 cut(s) 1018, 1020
GluI GCNGC 9 cut(s) 38, 183, 394, 460, 839, 1421, 1505, 1508, 1511
GsuI CTGGAG 1 cut(s) 933
HapII CCGG 2 cut(s) 124, 910
HgaI GACGC 3 cut(s) 264, 559, 809
HhaI GCGC 2 cut(s) 1019, 1021
Hin1I GRCGYC 2 cut(s) 275, 801
Hin1II CATG 7 cut(s) 24, 242, 251, 758, 854, 1025, 1213
Hin6I GCGC 2 cut(s) 1017, 1019
HinP1I GCGC 2 cut(s) 1017, 1019
HincII GTYRAC 2 cut(s) 79, 129
HindII GTYRAC 2 cut(s) 79, 129
HinfI GANTC 5 cut(s) 98, 296, 702, 1106, 1331
HpaII CCGG 2 cut(s) 124, 910
HphI GGTGA 5 cut(s) 157, 226, 878, 954, 972
Hpy166II GTNNAC 4 cut(s) 79, 129, 244, 785
Hpy188I TCNGA 9 cut(s) 481, 523, 829, 1033, 1231, 1345, 1360, 1416, 1437
Hpy188III TCNNGA 4 cut(s) 350, 1047, 1103, 1147
Hpy8I GTNNAC 4 cut(s) 79, 129, 244, 785
HpyAV CCTTC 4 cut(s) 753, 857, 886, 907
HpyCH4III ACNGT 5 cut(s) 11, 133, 157, 902, 1137
HpyCH4IV ACGT 1 cut(s) 631
HpyCH4V TGCA 8 cut(s) 24, 37, 508, 572, 693, 1117, 1423, 1504
HpyF10VI GCNNNNNNNGC 3 cut(s) 281, 456, 1510
HpySE526I ACGT 1 cut(s) 631
Hsp92I GRCGYC 2 cut(s) 275, 801
Hsp92II CATG 7 cut(s) 24, 242, 251, 758, 854, 1025, 1213
HspAI GCGC 2 cut(s) 1017, 1019
KpnI GGTACC 1 cut(s) 324
Kzo9I GATC 3 cut(s) 925, 1172, 1450
LmnI GCTCC 3 cut(s) 404, 1485, 1530
Lsp1109I GCAGC 9 cut(s) 49, 194, 405, 471, 850, 1407, 1497, 1516, 1519
LweI GCATC 1 cut(s) 1491
MaeI CTAG 5 cut(s) 138, 209, 342, 999, 1457
MaeII ACGT 1 cut(s) 631
MaeIII GTNAC 6 cut(s) 5, 149, 214, 234, 497, 866
MalI GATC 3 cut(s) 927, 1174, 1452
MboI GATC 3 cut(s) 925, 1172, 1450
MflI RGATCY 2 cut(s) 1172, 1450
MhlI GDGCHC 1 cut(s) 1442
MlyI GAGTC 2 cut(s) 305, 1115
MseI TTAA 9 cut(s) 312, 398, 423, 468, 555, 656, 888, 930, 1391
MslI CAYNNNNRTG 2 cut(s) 252, 1445
MspA1I CMGCKG 1 cut(s) 1510
MspCI CTTAAG 1 cut(s) 397
MspI CCGG 2 cut(s) 124, 910
MspR9I CCNGG 1 cut(s) 293
MvaI CCWGG 1 cut(s) 293
MvnI CGCG 1 cut(s) 1019
MwoI GCNNNNNNNGC 3 cut(s) 281, 456, 1510
NdeII GATC 3 cut(s) 925, 1172, 1450
NlaIII CATG 7 cut(s) 24, 242, 251, 758, 854, 1025, 1213
NlaIV GGNNCC 2 cut(s) 322, 722
NmuCI GTSAC 4 cut(s) 149, 214, 497, 866
NspI RCATGY 2 cut(s) 242, 1213
NspV TTCGAA 1 cut(s) 705
OliI CACNNNNGTG 1 cut(s) 1445
PaeR7I CTCGAG 1 cut(s) 431
PauI GCGCGC 1 cut(s) 1017
PciI ACATGT 1 cut(s) 238
PfeI GAWTC 3 cut(s) 98, 702, 1331
PflFI GACNNNGTC 2 cut(s) 133, 155
PinAI ACCGGT 1 cut(s) 123
PkrI GCNGC 9 cut(s) 39, 184, 395, 461, 840, 1422, 1506, 1509, 1512
PleI GAGTC 2 cut(s) 304, 1114
PpsI GAGTC 2 cut(s) 304, 1114
Ppu21I YACGTR 1 cut(s) 632
PscI ACATGT 1 cut(s) 238
Psp6I CCWGG 1 cut(s) 291
PspGI CCWGG 1 cut(s) 291
PspN4I GGNNCC 2 cut(s) 322, 722
PspPI GGNCC 1 cut(s) 721
PspXI VCTCGAGB 1 cut(s) 431
PstI CTGCAG 1 cut(s) 1425
PstNI CAGNNNCTG 1 cut(s) 1510
PsuI RGATCY 2 cut(s) 1172, 1450
PsyI GACNNNGTC 2 cut(s) 133, 155
PteI GCGCGC 1 cut(s) 1017
PvuII CAGCTG 1 cut(s) 1510
RsaI GTAC 4 cut(s) 174, 322, 368, 630
RsaNI GTAC 4 cut(s) 173, 321, 367, 629
RseI CAYNNNNRTG 2 cut(s) 252, 1445
SaqAI TTAA 9 cut(s) 312, 398, 423, 468, 555, 656, 888, 930, 1391
SatI GCNGC 9 cut(s) 38, 183, 394, 460, 839, 1421, 1505, 1508, 1511
Sau3AI GATC 3 cut(s) 925, 1172, 1450
Sau96I GGNCC 1 cut(s) 721
SchI GAGTC 2 cut(s) 305, 1115
ScrFI CCNGG 1 cut(s) 293
SduI GDGCHC 1 cut(s) 1442
SfaNI GCATC 1 cut(s) 1491
SfcI CTRYAG 1 cut(s) 1421
Sfr274I CTCGAG 1 cut(s) 431
SfuI TTCGAA 1 cut(s) 705
SinI GGWCC 1 cut(s) 721
SlaI CTCGAG 1 cut(s) 431
SmiMI CAYNNNNRTG 2 cut(s) 252, 1445
SmlI CTYRAG 2 cut(s) 397, 431
SmoI CTYRAG 2 cut(s) 397, 431
SspMI CTAG 5 cut(s) 138, 209, 342, 999, 1457
StyD4I CCNGG 1 cut(s) 291
StyI CCWWGG 1 cut(s) 1514
TaaI ACNGT 5 cut(s) 11, 133, 157, 902, 1137
TaiI ACGT 1 cut(s) 634
TaqI TCGA 4 cut(s) 432, 705, 1263, 1293
TfiI GAWTC 3 cut(s) 98, 702, 1331
Tru1I TTAA 9 cut(s) 312, 398, 423, 468, 555, 656, 888, 930, 1391
Tru9I TTAA 9 cut(s) 312, 398, 423, 468, 555, 656, 888, 930, 1391
TseFI GTSAC 4 cut(s) 149, 214, 497, 866
TseI GCWGC 9 cut(s) 37, 182, 393, 459, 838, 1420, 1504, 1507, 1510
Tsp45I GTSAC 4 cut(s) 149, 214, 497, 866
TspDTI ATGAA 4 cut(s) 279, 779, 1068, 1311
Tth111I GACNNNGTC 2 cut(s) 133, 155
Vha464I CTTAAG 1 cut(s) 397
VpaK11BI GGWCC 1 cut(s) 721
XagI CCTNNNNNAGG 1 cut(s) 86
XapI RAATTY 3 cut(s) 92, 266, 714
XceI RCATGY 2 cut(s) 242, 1213
XhoI CTCGAG 1 cut(s) 431
XspI CTAG 5 cut(s) 138, 209, 342, 999, 1457
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.