MD10G1252800.v1.1

WPP domain-associated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0001383
Physical Location & Seq
Forward (+)
34558657 .. 34563991
5335 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1252800.v1.1.491

Sequence Viewer

Length: 2715 bp
ATGGAGAGTTTAGAAGTCATGAGTAACGGTGTTGAATCATGCAATGGAGATTCGGTTCAGCTTAGCAATGATGTGAAAGAAAATGATAATCGGGATCTTGACCTTCTCCAGGATTTGGATTCTTATTGGGAAGAAATCAGTGACCGGTTGACCATATCGAGGATGGTGAGTGACTCAGTCATCAAGGGGATTGTTAATGCAGTAACCAATGACGCAGCAGAGAAAATTGCTCAAAAAGAACTAGAGGTGACTAAGCTGAAGGAAATGTTACATGTTTACCATTTGGGTGGTGAGGAAAACGAATTCTCACCCATGCAGCGAGAGTCAAAGGGAACTGAAGACAGACCTATTAAAAAAGGTGCCAAAGGTGGCATGCGTCCTAGCTTTCTTGAAGCTGTCGTACAGCATGATGGCATAGAAAAAACTTTGGGCATCTTAAAAGGAACAACTGAAGAGCACTTCAAGCAGCTCAAGAATGAAATTGATGGGATTAGAGGGTGTAGTTCGATCAAGAGGATTGGTTCTGGTTCTCAGTTGTTGGGTTTCGGTGACATACTGCAAGATAATGTATCTGACAGATGGATTGATGTGGATAGATTGCTCAATAGCCTAAAAGGTGCAATAGAAACTGTCTTTCAACGGGTGGAAGAAATGGTTAGCTTGGCAAATGCATCAGTCTGTGAATGGCAGCAGGAGCAGGATTTTAAAGCAGAAATAGACGCACTGGTGATGAGGAATTGTATCCGGAGTGTTGAAGAAAAAAATTTGGACCGGTTTCATGGCGATAAGAATTTGCATTGGCTTGGAAGGATGGAAGAGATATCAAGTTTACGTGAGGAATTAGATACCATTTCAAAATCACTATCTATTTCTGACATTGGGCACCTATCTTCTTACGGGTCCTTGGAAGGTGATGAAGAGAGTAATAATTATAAGAAGGGTGACCGTTTGCACCGCAAGGTTTCATCATCGTTGCTATCATCACCAACAATGACTTCAACATCAACATCAACATCAACATCATCATCATCATCTCTTTGGGAAGAAAATGGAAAACATGATGAGTCAGAAATAATGCAAGAACATTTGGATGCCACCCGGCTTAGGCATATGTCAATAGATGAGTTGACAAACTATTACAATAATGAGATGACTAAATTGAAGAGAAGTCATGAATCTGAAGTGCTAAATTTGACTGAGCAACTATTCAGCCTCAGAAGAGAATTTTTCAGGGAAAGGGGATCCTCTTTGCCGTCAAAGAAGAGTAAGGAGTTTGACATGTTGAGGAGGCGAATCTCTGAGGTTATTACTAAATTAGATGAAGTGCTTGTCGAAAAGGCGGACGTGGCTACATTTGGTATTTATGAAGAAAGTCTTAGCAGTTTGAAAGACAGACTGGAGTTGCTCATTTCAGAAAATAAGCACCTCAGATATTTGCTTGCAGATAAGAAAAGGGAAGTTAAGTGTCTTTCAATTCAAGTTTCTGAGGCTGCTAAGAAAATGTCAGAACATTCCATGGCTGAGGCAAAGTTGTTAAAAACAACTGCTAATCTTAAATCAGCTGTTAAAGATGCGGATATTGAAGCTTTAATTGTTGAAGATACATATGCTTGTATTCTCAGGGGAATGATGGATCAAATTAATTGTATCGCTGAAGAGTCACATATGGAAAATATTTATATGCAAGAAATCTACAAAGGTATACTTAAAGAAGCTGCCCATAGTGCTCAACCTGCTAGCCAACGTGAAATTGAAGATTTGAGTATGGAGTACACTATCATGCAAGAACTATGTGTACTTGTATTCAAAGAAGTCATGAAAGATGCTGAGAAAAATCTCAACAACCTGAACTTGAAATATATAGAAGAAAATGAACTCCGGGTTTTGATTGAGATGGAAAAACTAGAAAAAGAGAAACAATGTGAATTGGAGGTTGCAAACACAGTGAGATTAAAGCAAGAAATATTATCTCTGTCAGAAGAAAAGGAGCAGTTGGCACAGGATGCAACAGCGGCATTGGAAAACGAAAAGGAGAGATATGAATTAGCTGCTCAGGAGCTACATAATTTAAGGGACGAGACATGTCGGCAACAGAAATTGATTTCTGACAGCATTGAAGAGTCAAATGCTACAAAGCAGAACTTAACTGATGCATTGGAGCAAATTGAAAGACGTAAGGCTGACATGTGCATGTTAGATCAGAGGCTTGAACTAGCAATGAAAGAGTTAAGCGAAGTTAATGAGGAGAGGAGAATGCTTCTTGATGCAAACCAAGAGAAGCAGAATGTTTTATCTTTGTTGGAAGCAAAAGAAAGGGAACACAAGCAGCAATTGGAATCAACGGCTGTGTATATCCGTGAATTATTGAAAGGGGTTGCTGAATTTGAATGTAGAGTAACACAAGATATTTCAAGGAAATGTTCAAGGTTGAAGAGTTTGGGTTCTCAATTGCGTTTTCTTAAACAAAAAGCTAATGTCATTGTAAGAAGAGGGTTGCTGTACCGGCAGAGACTCGAAAAGAAATGTTCTGACCTTGAAAAGGCCGAAGCTGAGGTTGATCTTTTGGGGGATGAGGTGGGGACTCTATTGAGCCTTGTTGAGAAAATATACATTGCTCTTGATCATTATTCACCAGTATTGAAGCATTATCCTGGAATAACTGAAATCTTGACGCTGGTAAGAAGAGAACTAACTGGAGAAATTAAAGCAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
No domains found.

Protein Analysis

905

Amino Acids

103.36

Weight (kDa)

5.13

Isoelectric Point (pI)

48.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 933
Acc36I ACCTGC 1 cut(s) 1741
AccB1I GGYRCC 2 cut(s) 359, 882
AccB7I CCANNNNNTGG 1 cut(s) 115
AccI GTMKAC 1 cut(s) 1702
AccIII TCCGGA 1 cut(s) 744
AciI CCGC 4 cut(s) 955, 1340, 1574, 2012
AclWI GGATC 4 cut(s) 102, 1236, 1249, 1641
AcsI RAATTY 6 cut(s) 302, 763, 790, 1189, 1223, 2381
AcuI CTGAAG 5 cut(s) 278, 357, 471, 1200, 1674
AfaI GTAC 4 cut(s) 402, 1772, 1797, 2501
AfiI CCNNNNNNNGG 5 cut(s) 109, 115, 159, 1104, 2539
AflIII ACRYGT 4 cut(s) 271, 1278, 2081, 2184
AgeI ACCGGT 2 cut(s) 144, 771
AjiI CACGTC 1 cut(s) 1345
AjnI CCWGG 2 cut(s) 108, 2650
AjuI GAANNNNNNNTTGG 2 cut(s) 979, 1011
AloI GAACNNNNNNTCC 2 cut(s) 39, 71
Alw21I GWGCWC 2 cut(s) 459, 1729
Alw26I GTCTC 2 cut(s) 2072, 2503
AlwI GGATC 4 cut(s) 102, 1236, 1249, 1641
Aor13HI TCCGGA 1 cut(s) 744
AoxI GGCC 1 cut(s) 2541
ApeKI GCWGC 9 cut(s) 215, 316, 466, 688, 1490, 1715, 2048, 2326, 2708
ApoI RAATTY 6 cut(s) 302, 763, 790, 1189, 1223, 2381
AseI ATTAAT 1 cut(s) 1641
AsiGI ACCGGT 2 cut(s) 144, 771
AspS9I GGNCC 2 cut(s) 769, 900
AsuC2I CCSGG 2 cut(s) 1099, 1880
AsuNHI GCTAGC 1 cut(s) 1736
AvaII GGWCC 2 cut(s) 769, 900
BaeGI GKGCMC 1 cut(s) 885
BamHI GGATCC 1 cut(s) 1241
BanI GGYRCC 2 cut(s) 359, 882
BarI GAAGNNNNNNTAC 2 cut(s) 384, 416
BbsI GAAGAC 1 cut(s) 345
Bbv12I GWGCWC 2 cut(s) 459, 1729
BbvCI CCTCAGC 2 cut(s) 1521, 2550
BbvI GCAGC 8 cut(s) 227, 328, 478, 700, 1477, 1702, 2035, 2338
BccI CCATC 7 cut(s) 157, 404, 479, 573, 805, 1624, 1888
BceAI ACGGC 2 cut(s) 1237, 2358
BciT130I CCWGG 2 cut(s) 110, 2652
BciVI GTATCC 1 cut(s) 752
BclI TGATCA 1 cut(s) 2620
BcnI CCSGG 2 cut(s) 1099, 1880
BcoDI GTCTC 2 cut(s) 2072, 2503
BfaI CTAG 5 cut(s) 242, 381, 1737, 1904, 2213
BfuAI ACCTGC 1 cut(s) 1741
BfuI GTATCC 1 cut(s) 752
BlpI GCTNAGC 1 cut(s) 62
Bme1390I CCNGG 4 cut(s) 110, 1099, 1880, 2652
Bme18I GGWCC 2 cut(s) 769, 900
BmgBI CACGTC 1 cut(s) 1345
BmgT120I GGNCC 2 cut(s) 769, 900
BmiI GGNNCC 4 cut(s) 361, 884, 901, 1243
BmrFI CCNGG 4 cut(s) 110, 1099, 1880, 2652
BmsI GCATC 8 cut(s) 441, 680, 1081, 1561, 1813, 1993, 2140, 2254
BmtI GCTAGC 1 cut(s) 1740
BpiI GAAGAC 1 cut(s) 345
BpmI CTGGAG 3 cut(s) 92, 1418, 2715
Bpu10I CCTNAGC 4 cut(s) 1103, 1521, 2052, 2550
Bpu1102I GCTNAGC 1 cut(s) 62
BpuEI CTTGAG 1 cut(s) 455
BpuMI CCSGG 2 cut(s) 1099, 1880
BsaAI YACGTR 1 cut(s) 833
BsaJI CCNNGG 2 cut(s) 903, 1515
BsaWI WCCGGW 3 cut(s) 144, 744, 771
BsaXI ACNNNNNCTCC 2 cut(s) 39, 69
Bsc4I CCNNNNNNNGG 5 cut(s) 109, 115, 159, 1104, 2539
Bse118I RCCGGY 3 cut(s) 144, 771, 2502
Bse1I ACTGG 4 cut(s) 729, 1401, 2633, 2698
Bse3DI GCAATG 4 cut(s) 49, 73, 2223, 2610
BseAI TCCGGA 1 cut(s) 744
BseBI CCWGG 2 cut(s) 110, 2652
BseDI CCNNGG 2 cut(s) 903, 1515
BseGI GGATG 5 cut(s) 168, 816, 1096, 2008, 2575
BseLI CCNNNNNNNGG 5 cut(s) 109, 115, 159, 1104, 2539
BseMI GCAATG 4 cut(s) 49, 73, 2223, 2610
BseNI ACTGG 4 cut(s) 729, 1401, 2633, 2698
BseRI GAGGAG 3 cut(s) 1300, 2258, 2263
BseSI GKGCMC 1 cut(s) 885
BseXI GCAGC 8 cut(s) 227, 328, 478, 700, 1477, 1702, 2035, 2338
BshFI GGCC 1 cut(s) 2543
BshNI GGYRCC 2 cut(s) 359, 882
BshTI ACCGGT 2 cut(s) 144, 771
BsiHKAI GWGCWC 2 cut(s) 459, 1729
BsiSI CCGG 6 cut(s) 145, 745, 772, 1099, 1879, 2503
BslFI GGGAC 2 cut(s) 2087, 2593
BslI CCNNNNNNNGG 5 cut(s) 109, 115, 159, 1104, 2539
BsmAI GTCTC 2 cut(s) 2072, 2503
BsmFI GGGAC 2 cut(s) 2087, 2593
BsmI GAATGC 1 cut(s) 2259
BsnI GGCC 1 cut(s) 2543
Bsp1286I GDGCHC 3 cut(s) 459, 885, 1729
Bsp13I TCCGGA 1 cut(s) 744
Bsp143I GATC 7 cut(s) 94, 507, 1241, 1633, 2197, 2557, 2620
Bsp1720I GCTNAGC 1 cut(s) 62
Bsp19I CCATGG 1 cut(s) 1515
BspACI CCGC 4 cut(s) 955, 1340, 1574, 2012
BspANI GGCC 1 cut(s) 2543
BspEI TCCGGA 1 cut(s) 744
BspHI TCATGA 3 cut(s) 18, 1171, 1815
BspLI GGNNCC 4 cut(s) 361, 884, 901, 1243
BspMI ACCTGC 1 cut(s) 1741
BspOI GCTAGC 1 cut(s) 1740
BspPI GGATC 4 cut(s) 102, 1236, 1249, 1641
BspQI GCTCTTC 1 cut(s) 447
BspT107I GGYRCC 2 cut(s) 359, 882
BsrDI GCAATG 4 cut(s) 49, 73, 2223, 2610
BsrFI RCCGGY 3 cut(s) 144, 771, 2502
BsrI ACTGG 4 cut(s) 729, 1401, 2633, 2698
BssAI RCCGGY 3 cut(s) 144, 771, 2502
BssECI CCNNGG 2 cut(s) 903, 1515
BssMI GATC 7 cut(s) 94, 507, 1241, 1633, 2197, 2557, 2620
BssNAI GTATAC 1 cut(s) 1703
BssT1I CCWWGG 2 cut(s) 903, 1515
Bst1107I GTATAC 1 cut(s) 1703
Bst2UI CCWGG 2 cut(s) 110, 2652
Bst4CI ACNGT 4 cut(s) 29, 631, 947, 1945
BstAPI GCANNNNNTGC 1 cut(s) 2003
BstBAI YACGTR 1 cut(s) 833
BstC8I GCNNGC 3 cut(s) 374, 1440, 1738
BstDSI CCRYGG 1 cut(s) 1515
BstEII GGTNACC 1 cut(s) 941
BstENI CCTNNNNNAGG 2 cut(s) 107, 2537
BstF5I GGATG 5 cut(s) 168, 816, 1096, 2008, 2575
BstKTI GATC 7 cut(s) 97, 510, 1244, 1636, 2200, 2560, 2623
BstMAI GTCTC 2 cut(s) 2072, 2503
BstMBI GATC 7 cut(s) 94, 507, 1241, 1633, 2197, 2557, 2620
BstMWI GCNNNNNNNGC 8 cut(s) 463, 694, 1346, 1724, 1733, 2003, 2012, 2503
BstNI CCWGG 2 cut(s) 110, 2652
BstNSI RCATGY 6 cut(s) 275, 376, 1282, 2085, 2188, 2194
BstPI GGTNACC 1 cut(s) 941
BstSCI CCNGG 4 cut(s) 108, 1097, 1878, 2650
BstSLI GKGCMC 1 cut(s) 885
BstV1I GCAGC 8 cut(s) 227, 328, 478, 700, 1477, 1702, 2035, 2338
BstV2I GAAGAC 1 cut(s) 345
BstX2I RGATCY 2 cut(s) 94, 1241
BstXI CCANNNNNNTGG 1 cut(s) 287
BstYI RGATCY 2 cut(s) 94, 1241
BstZ17I GTATAC 1 cut(s) 1703
BsuI GTATCC 1 cut(s) 752
BsuRI GGCC 1 cut(s) 2543
BtgI CCRYGG 1 cut(s) 1515
BtrI CACGTC 1 cut(s) 1345
BtsCI GGATG 5 cut(s) 168, 816, 1096, 2008, 2575
BtsIMutI CAGTG 3 cut(s) 145, 722, 1950
BveI ACCTGC 1 cut(s) 1741
Cac8I GCNNGC 3 cut(s) 374, 1440, 1738
CciI TCATGA 3 cut(s) 18, 1171, 1815
Cfr10I RCCGGY 3 cut(s) 144, 771, 2502
Cfr13I GGNCC 2 cut(s) 769, 900
CseI GACGC 4 cut(s) 221, 365, 728, 2680
Csp6I GTAC 4 cut(s) 401, 1771, 1796, 2500
CspAI ACCGGT 2 cut(s) 144, 771
CviQI GTAC 4 cut(s) 401, 1771, 1796, 2500
DpnI GATC 7 cut(s) 96, 509, 1243, 1635, 2199, 2559, 2622
DpnII GATC 7 cut(s) 94, 507, 1241, 1633, 2197, 2557, 2620
DraI TTTAAA 1 cut(s) 706
EciI GGCGGA 1 cut(s) 1355
Eco130I CCWWGG 2 cut(s) 903, 1515
Eco32I GATATC 1 cut(s) 822
Eco47I GGWCC 2 cut(s) 769, 900
Eco57I CTGAAG 5 cut(s) 278, 357, 471, 1200, 1674
Eco91I GGTNACC 1 cut(s) 941
EcoNI CCTNNNNNAGG 2 cut(s) 107, 2537
EcoO109I RGGNCCY 1 cut(s) 900
EcoO65I GGTNACC 1 cut(s) 941
EcoRI GAATTC 1 cut(s) 302
EcoRII CCWGG 2 cut(s) 108, 2650
EcoRV GATATC 1 cut(s) 822
EcoT14I CCWWGG 2 cut(s) 903, 1515
EcoT22I ATGCAT 2 cut(s) 673, 2155
ErhI CCWWGG 2 cut(s) 903, 1515
FalI AAGNNNNNCTT 6 cut(s) 1359, 1391, 1689, 1721, 2126, 2158
FaqI GGGAC 2 cut(s) 2087, 2593
FauNDI CATATG 3 cut(s) 1110, 1606, 1665
FbaI TGATCA 1 cut(s) 2620
FblI GTMKAC 1 cut(s) 1702
FokI GGATG 5 cut(s) 175, 823, 1103, 2015, 2582
FspBI CTAG 5 cut(s) 242, 381, 1737, 1904, 2213
GsuI CTGGAG 3 cut(s) 92, 1418, 2715
HaeIII GGCC 1 cut(s) 2543
HapII CCGG 6 cut(s) 145, 745, 772, 1099, 1879, 2503
HgaI GACGC 4 cut(s) 221, 365, 728, 2680
HincII GTYRAC 2 cut(s) 150, 1128
HindII GTYRAC 2 cut(s) 150, 1128
HindIII AAGCTT 1 cut(s) 1584
HpaII CCGG 6 cut(s) 145, 745, 772, 1099, 1879, 2503
Hpy166II GTNNAC 7 cut(s) 150, 277, 830, 1128, 1703, 1773, 1796
Hpy8I GTNNAC 7 cut(s) 150, 277, 830, 1128, 1703, 1773, 1796
HpyAV CCTTC 5 cut(s) 113, 253, 801, 902, 931
HpyCH4III ACNGT 4 cut(s) 29, 631, 947, 1945
HpyCH4IV ACGT 4 cut(s) 832, 1344, 1744, 2173
HpyF10VI GCNNNNNNNGC 8 cut(s) 463, 694, 1346, 1724, 1733, 2003, 2012, 2503
HpySE526I ACGT 4 cut(s) 832, 1344, 1744, 2173
Kpn2I TCCGGA 1 cut(s) 744
Ksp22I TGATCA 1 cut(s) 2620
Kzo9I GATC 7 cut(s) 94, 507, 1241, 1633, 2197, 2557, 2620
LguI GCTCTTC 1 cut(s) 447
LmnI GCTCC 4 cut(s) 694, 1987, 2056, 2158
Lsp1109I GCAGC 8 cut(s) 227, 328, 478, 700, 1477, 1702, 2035, 2338
LweI GCATC 8 cut(s) 441, 680, 1081, 1561, 1813, 1993, 2140, 2254
MaeI CTAG 5 cut(s) 242, 381, 1737, 1904, 2213
MaeII ACGT 4 cut(s) 832, 1344, 1744, 2173
MalI GATC 7 cut(s) 96, 509, 1243, 1635, 2199, 2559, 2622
MboI GATC 7 cut(s) 94, 507, 1241, 1633, 2197, 2557, 2620
MfeI CAATTG 2 cut(s) 2330, 2447
MflI RGATCY 2 cut(s) 94, 1241
MhlI GDGCHC 3 cut(s) 459, 885, 1729
MlyI GAGTC 7 cut(s) 167, 332, 1073, 1667, 2129, 2505, 2575
MmeI TCCRAC 1 cut(s) 2280
Mph1103I ATGCAT 2 cut(s) 673, 2155
MroI TCCGGA 1 cut(s) 744
MslI CAYNNNNRTG 4 cut(s) 285, 1089, 1778, 2189
MspA1I CMGCKG 2 cut(s) 1562, 2012
MspI CCGG 6 cut(s) 145, 745, 772, 1099, 1879, 2503
MspR9I CCNGG 4 cut(s) 110, 1099, 1880, 2652
MunI CAATTG 2 cut(s) 2330, 2447
Mva1269I GAATGC 1 cut(s) 2259
MvaI CCWGG 2 cut(s) 110, 2652
MwoI GCNNNNNNNGC 8 cut(s) 463, 694, 1346, 1724, 1733, 2003, 2012, 2503
NciI CCSGG 2 cut(s) 1099, 1880
NcoI CCATGG 1 cut(s) 1515
NdeI CATATG 3 cut(s) 1110, 1606, 1665
NdeII GATC 7 cut(s) 94, 507, 1241, 1633, 2197, 2557, 2620
NheI GCTAGC 1 cut(s) 1736
NlaIV GGNNCC 4 cut(s) 361, 884, 901, 1243
NmuCI GTSAC 6 cut(s) 140, 170, 247, 548, 941, 1659
NsiI ATGCAT 2 cut(s) 673, 2155
NspI RCATGY 6 cut(s) 275, 376, 1282, 2085, 2188, 2194
PaeI GCATGC 1 cut(s) 376
PagI TCATGA 3 cut(s) 18, 1171, 1815
PciI ACATGT 4 cut(s) 271, 1278, 2081, 2184
PciSI GCTCTTC 1 cut(s) 447
PctI GAATGC 1 cut(s) 2259
PfeI GAWTC 6 cut(s) 35, 50, 119, 1175, 1293, 2336
PflFI GACNNNGTC 1 cut(s) 176
PflMI CCANNNNNTGG 1 cut(s) 115
PfoI TCCNGGA 2 cut(s) 108, 2650
PinAI ACCGGT 2 cut(s) 144, 771
PleI GAGTC 7 cut(s) 167, 331, 1072, 1666, 2128, 2505, 2575
PpsI GAGTC 7 cut(s) 167, 331, 1072, 1666, 2128, 2505, 2575
Ppu21I YACGTR 1 cut(s) 833
PpuMI RGGWCCY 1 cut(s) 900
PscI ACATGT 4 cut(s) 271, 1278, 2081, 2184
PshBI ATTAAT 1 cut(s) 1641
PsiI TTATAA 1 cut(s) 933
Psp5II RGGWCCY 1 cut(s) 900
Psp6I CCWGG 2 cut(s) 108, 2650
PspEI GGTNACC 1 cut(s) 941
PspGI CCWGG 2 cut(s) 108, 2650
PspN4I GGNNCC 4 cut(s) 361, 884, 901, 1243
PspPI GGNCC 2 cut(s) 769, 900
PspPPI RGGWCCY 1 cut(s) 900
PsrI GAACNNNNNNTAC 2 cut(s) 1779, 1811
PsuI RGATCY 2 cut(s) 94, 1241
PsyI GACNNNGTC 1 cut(s) 176
PvuII CAGCTG 1 cut(s) 1562
RsaI GTAC 4 cut(s) 402, 1772, 1797, 2501
RsaNI GTAC 4 cut(s) 401, 1771, 1796, 2500
RseI CAYNNNNRTG 4 cut(s) 285, 1089, 1778, 2189
SapI GCTCTTC 1 cut(s) 447
Sau3AI GATC 7 cut(s) 94, 507, 1241, 1633, 2197, 2557, 2620
Sau96I GGNCC 2 cut(s) 769, 900
SchI GAGTC 7 cut(s) 167, 332, 1073, 1667, 2129, 2505, 2575
ScrFI CCNGG 4 cut(s) 110, 1099, 1880, 2652
SduI GDGCHC 3 cut(s) 459, 885, 1729
SfaNI GCATC 8 cut(s) 441, 680, 1081, 1561, 1813, 1993, 2140, 2254
SinI GGWCC 2 cut(s) 769, 900
SmiMI CAYNNNNRTG 4 cut(s) 285, 1089, 1778, 2189
SmlI CTYRAG 1 cut(s) 470
SmoI CTYRAG 1 cut(s) 470
SphI GCATGC 1 cut(s) 376
SsiI CCGC 4 cut(s) 955, 1340, 1574, 2012
SspI AATATT 2 cut(s) 1675, 1965
SspMI CTAG 5 cut(s) 242, 381, 1737, 1904, 2213
StyD4I CCNGG 4 cut(s) 108, 1097, 1878, 2650
StyI CCWWGG 2 cut(s) 903, 1515
TaaI ACNGT 4 cut(s) 29, 631, 947, 1945
TaiI ACGT 4 cut(s) 835, 1347, 1747, 2176
TaqI TCGA 4 cut(s) 158, 506, 1332, 2514
TatI WGTACW 2 cut(s) 1770, 1795
TauI GCSGC 1 cut(s) 2015
TfiI GAWTC 6 cut(s) 35, 50, 119, 1175, 1293, 2336
TscAI CASTG 3 cut(s) 145, 729, 1950
TseFI GTSAC 6 cut(s) 140, 170, 247, 548, 941, 1659
TseI GCWGC 9 cut(s) 215, 316, 466, 688, 1490, 1715, 2048, 2326, 2708
Tsp45I GTSAC 6 cut(s) 140, 170, 247, 548, 941, 1659
TspGWI ACGGA 1 cut(s) 2345
TspRI CASTG 3 cut(s) 145, 729, 1950
Tth111I GACNNNGTC 1 cut(s) 176
Van91I CCANNNNNTGG 1 cut(s) 115
VpaK11BI GGWCC 2 cut(s) 769, 900
VspI ATTAAT 1 cut(s) 1641
XagI CCTNNNNNAGG 2 cut(s) 107, 2537
XapI RAATTY 6 cut(s) 302, 763, 790, 1189, 1223, 2381
XceI RCATGY 6 cut(s) 275, 376, 1282, 2085, 2188, 2194
XcmI CCANNNNNNNNNTGG 1 cut(s) 160
XmiI GTMKAC 1 cut(s) 1702
XspI CTAG 5 cut(s) 242, 381, 1737, 1904, 2213
Zsp2I ATGCAT 2 cut(s) 673, 2155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.