Rh5DG123200

WPP domain-associated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0001383
Physical Location & Seq
Forward (+)
11167163 .. 11171894
4732 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG123200.1

Sequence Viewer

Length: 2886 bp
ATGGATAATGATGTTAAATCGTGCAATGGTGGGATGGAGAGTTTAGAGGTCATGCGTAATGGTTTTCAATCATGCAATGGTTTGTTGGTGCAGCATAATTATAGTGTGAAAGAAAATGAGAATCCGAATGTTGATCTTCTTGAGGGTTTGGACTCTTACATGGAAGATATCAACGAACGGTTGACCATATCAAGGATGGTGAGTGACACGGTCATCAAGGGTATGGTGAATGCAGTAACAGAAGAGGCAGCTGAGAAAATTGCTCAGAAAGAACAAGAGGTGACTAAATTGAAGGAAATGTTACATATTTATCACGTGGGTGTTCATGAGAACGAATTCTCGGGGTCTTTAGTAATGCTCCGAGAGTCAAGAGGTACCCAACACGGACTTACTCATATGGGTAGCAAAGATCGAATGCAGCAGCCTACTTCATTTGAAGCTGTTGCTGGGCATGATAGAATAGCAGAAACTTTGGTCCACTTAAGAGGGACTACTAATGAGGAATTCAAGAAGCTCAAAAAAGAAATTGATAGCATAAGAGGGCGTAATTCAATGAAGAGGATTAATTCCAGTTCTGGTTTGGGTGGCATACTGCAAGATAAAGTATCTGACAGGTGGGATGTGGATAGAACCTTGGATAGTCTAAAGACTACAATAGAAAGTGTCTATCAACAGGTGGAAGAAATGGTTCACTTGTCAAAGGCATCAGTATATGAGTGGCAGGTGGATCAGGAGTTTAAAGAAAAAATTGAAGGTGAAATTGAAGCGCTTGTGATGAGGAATTGTATTTGGAGCGTTGAAGAAAACATATGGGATTGCTTTTCTGGTGCAAAAAATGTGAACTGGGATGGAAGGATCAAAGGGATATCAAGTATACGTGATGAATTAGATGCTATTTCTAAATCACTATCTGTCTCTGACAATGGGCAGCTATCTTCTCATGGATCCTTGGAAGGTGAAGAAGAGAGTAGCAATGGTAAAAAGGGTGCCGGTTCTTACCGCGAGGTATTGAACAATCTTAAATCAGCATCATCATTACCATCAACAATAACAACAACAGCAACAACATTATCACCATCAGCATCATCATCTTCATCTGTTCGGGAAGAAAATGGTATACATGATGAGTCAGAAATAAATATGGAAGAAGATTTAGATCCAGCTGCCTTGCTTAAGCATATGAAGAAATGTAAGAATGAGATTACTGAATTGAAGAGAAATCATGAGTTAGAAATACAAGATCTGACTGAGCAGCATTTCAGCCACATGAAGGAATTGCTGAAAGAAAGGAGACCGTCTTTAACATTGAAGAATAAGTTCGATATGTTGAGAAAGAGAATCTCTGAGGTGATTTCTAAAGTAGATGAAATTCTTGTAGAAAAGGGGGAAGTAGCTATATTGCTTCCTCATACATTTGGCAGCAATGAAGAAAGTCTCAGCAGCTTGAAAGATAGAGTGGAATCACTCCTCTCAGAAAACCACCAACTCAGAGATTTGCTTGAGGATAAGAAGAGAGAAATTAAGTGCCTTTCACTACAAGTTTCTGAAGCTGCAGAGAACCTGTCGCAACACTCTCTGGCTGAGGCAAAGTTATCGAAAACAGCTGGAAATATTAAAGCAGCTATGGAAGATGCGCATATTGAAGCTTTAATTGGTGAAGATTTATTTGCTGTTATTGTCAAGGAAGTGGTGGATGAGATTAAATGCATTGCTGAAGAGTCACAGGTGGAGAATAGTATTATGAATGAAGATTTGAATATGGAGTCCATCATCACGCAAGAACTATGTGGTGTTATGTTCAAAGATGATGAGGAGAAACTCAGTGAGCTGAACATTAAATATATTGAGGAATATGAACTTTGGGTTTTGCAGGAGATGGACAAACAAGAAAAGGAAAAACAATTAGAAGTGGAGGTTGCAAACAAAGTGAGCTTACAGAAAGAAGTACATTTTCTGGTAGGAGAAAAGGAGCAGTTGGCACGAGATGCAGCAGCTGCATTGGAAATCGAAAAAGAAAGATATGAATCAGCTGCTCAAGAGGTTGAAAATTTAAGGGGTGAGACGTGTCAACATCAGAAATTGATTTCAGAAAGCGTTGAAGAGTCAAATTCTGTAAAGCGTGGTTTGGCCGAGGCGTTGGAGCAAAATAAAGAAAATGAGCAGTTGGCGCGAGATGCAGCAGCTGCATTGGCAATCGAAAAGGAAAGATATGAATCAGCTGCTCAAGAGGTTGAAAATTTAAGGGGTGAGATATGTCAACATCAGAAATTTATTTCAGAAAGCGTTGAAAAGTCAAATGTTGCAAAGCGTGATTTGGCTGAGGCGTTGGAGCAAAATGAAAGACACAAGGCAGACATATGTAAGTTAGGACAAAAGCTTGAAGCAGCAGTGAAAAAGCTGAGGCAAGTTGAGGAAGATAGAAGGAGGCTTCTTGATGTCAACCAAGAGAAGCAGATTGCTGTATCTTGGTTCGAAGCAAAAGAAAGGGAGCTTAGCGAGCAACTTAAATCAATAGCTGTCTATATCAGTGGATTATTGGAAACGTTCGCTTATTTTGAACGTAGAGTGACACAAGATATTTCAGGGAAATGTTCGAGGTTGAAAAGTTTGACTTCTCAATCACATTTGCTTAAACAAAAAGCTGATGTACTTGTAAGACAAGGATTGCTGTACAAGCAAGGACTGGAAAAGAAATGTTCTGACCTACAGAAAGCTGAAGCTGAGGTCGATCTTTTGGGGGATAAGGTGGACACTCAGTTGAAGCTTGTTGAAAAAATATACATTGCCCTTGATCATTATTCACCAATATTGCAGCATTATCCTGGAATACCTGAGATTTTGGAGCTGTTAAGGAGGGAATTAAGTAAAGAAATTAACTCTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
No domains found.

Protein Analysis

961

Amino Acids

108.86

Weight (kDa)

5.07

Isoelectric Point (pI)

44.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 712
Acc16I TGCGCA 1 cut(s) 1635
Acc36I ACCTGC 1 cut(s) 712
Acc65I GGTACC 1 cut(s) 374
AccB1I GGYRCC 2 cut(s) 374, 986
AccI GTMKAC 2 cut(s) 874, 1117
AccII CGCG 2 cut(s) 1002, 2170
AciI CCGC 1 cut(s) 1000
AclI AACGTT 1 cut(s) 2543
AclWI GGATC 5 cut(s) 735, 863, 939, 952, 1151
AcoI YGGCCR 1 cut(s) 2127
AcsI RAATTY 7 cut(s) 335, 503, 1368, 2047, 2107, 2236, 2267
AcuI CTGAAG 3 cut(s) 1566, 1734, 2736
AcvI CACGTG 1 cut(s) 316
AfaI GTAC 4 cut(s) 376, 1947, 2649, 2672
AfeI AGCGCT 1 cut(s) 768
AfiI CCNNNNNNNGG 2 cut(s) 192, 1270
AflII CTTAAG 2 cut(s) 481, 1172
AflIII ACRYGT 1 cut(s) 2063
AjiI CACGTC 1 cut(s) 2064
AjnI CCWGG 1 cut(s) 2821
AjuI GAANNNNNNNTTGG 2 cut(s) 1635, 1667
AleI CACNNNNGTG 1 cut(s) 318
Alw26I GTCTC 4 cut(s) 919, 1285, 1439, 2054
AlwI GGATC 5 cut(s) 735, 863, 939, 952, 1151
AlwNI CAGNNNCTG 2 cut(s) 1994, 2183
Ama87I CYCGRG 1 cut(s) 340
Aor51HI AGCGCT 1 cut(s) 768
AoxI GGCC 1 cut(s) 2127
ApoI RAATTY 7 cut(s) 335, 503, 1368, 2047, 2107, 2236, 2267
AseI ATTAAT 1 cut(s) 564
Asp700I GAANNNNTTC 3 cut(s) 335, 687, 1316
Asp718I GGTACC 1 cut(s) 374
AspLEI GCGC 3 cut(s) 769, 1636, 2170
AspS9I GGNCC 1 cut(s) 475
AsuII TTCGAA 1 cut(s) 2472
AvaI CYCGRG 1 cut(s) 340
AvaII GGWCC 1 cut(s) 475
BamHI GGATCC 1 cut(s) 944
BanI GGYRCC 2 cut(s) 374, 986
BauI CACGAG 1 cut(s) 1980
BbrPI CACGTG 1 cut(s) 316
BbvCI CCTCAGC 4 cut(s) 1581, 2319, 2399, 2721
BccI CCATC 7 cut(s) 28, 190, 842, 1048, 1084, 1775, 1870
BcgI CGANNNNNNTGC 2 cut(s) 1575, 1609
BciT130I CCWGG 1 cut(s) 2823
BclI TGATCA 1 cut(s) 2791
BcoDI GTCTC 4 cut(s) 919, 1285, 1439, 2054
BfmI CTRYAG 2 cut(s) 1551, 2705
BfoI RGCGCY 1 cut(s) 770
BfrI CTTAAG 2 cut(s) 481, 1172
BfuAI ACCTGC 1 cut(s) 712
BglII AGATCT 1 cut(s) 1240
BlpI GCTNAGC 1 cut(s) 2492
Bme1390I CCNGG 1 cut(s) 2823
Bme18I GGWCC 1 cut(s) 475
BmeT110I CYCGRG 1 cut(s) 340
BmgBI CACGTC 1 cut(s) 2064
BmgT120I GGNCC 1 cut(s) 475
BmiI GGNNCC 3 cut(s) 376, 946, 988
BmrFI CCNGG 1 cut(s) 2823
BmrI ACTGGG 1 cut(s) 853
BmsI GCATC 7 cut(s) 713, 880, 1037, 1091, 1621, 1975, 2164
BmuI ACTGGG 1 cut(s) 853
Bpu10I CCTNAGC 4 cut(s) 1581, 2319, 2399, 2721
Bpu1102I GCTNAGC 1 cut(s) 2492
Bpu14I TTCGAA 1 cut(s) 2472
BpuEI CTTGAG 4 cut(s) 161, 1520, 2019, 2208
BsaAI YACGTR 2 cut(s) 316, 878
BsaBI GATNNNNATC 3 cut(s) 1155, 2023, 2212
BsaI GGTCTC 1 cut(s) 1285
BsaJI CCNNGG 3 cut(s) 633, 948, 2130
Bsc4I CCNNNNNNNGG 2 cut(s) 192, 1270
Bse118I RCCGGY 1 cut(s) 989
Bse1I ACTGG 3 cut(s) 570, 848, 2688
Bse3DI GCAATG 6 cut(s) 31, 82, 979, 1429, 1707, 2781
Bse8I GATNNNNATC 3 cut(s) 1155, 2023, 2212
BseBI CCWGG 1 cut(s) 2823
BseDI CCNNGG 3 cut(s) 633, 948, 2130
BseGI GGATG 5 cut(s) 39, 201, 625, 853, 1699
BseJI GATNNNNATC 3 cut(s) 1155, 2023, 2212
BseLI CCNNNNNNNGG 2 cut(s) 192, 1270
BseMI GCAATG 6 cut(s) 31, 82, 979, 1429, 1707, 2781
BseNI ACTGG 3 cut(s) 570, 848, 2688
BseRI GAGGAG 2 cut(s) 1457, 1826
BseYI CCCAGC 1 cut(s) 446
BsgI GTGCAG 1 cut(s) 110
Bsh1236I CGCG 2 cut(s) 1002, 2170
BshFI GGCC 1 cut(s) 2129
BshNI GGYRCC 2 cut(s) 374, 986
BsiHKCI CYCGRG 1 cut(s) 340
BsiSI CCGG 1 cut(s) 990
BslFI GGGAC 1 cut(s) 502
BslI CCNNNNNNNGG 2 cut(s) 192, 1270
BsmAI GTCTC 4 cut(s) 919, 1285, 1439, 2054
BsmBI CGTCTC 1 cut(s) 2054
BsmFI GGGAC 1 cut(s) 502
BsmI GAATGC 2 cut(s) 235, 420
BsnI GGCC 1 cut(s) 2129
Bso31I GGTCTC 1 cut(s) 1285
BsoBI CYCGRG 1 cut(s) 340
Bsp119I TTCGAA 1 cut(s) 2472
Bsp1407I TGTACA 1 cut(s) 2670
Bsp143I GATC 9 cut(s) 133, 409, 727, 855, 944, 1156, 1240, 2728, 2791
Bsp1720I GCTNAGC 1 cut(s) 2492
BspACI CCGC 1 cut(s) 1000
BspANI GGCC 1 cut(s) 2129
BspFNI CGCG 2 cut(s) 1002, 2170
BspHI TCATGA 2 cut(s) 325, 1222
BspLI GGNNCC 3 cut(s) 376, 946, 988
BspMAI CTGCAG 1 cut(s) 1555
BspMI ACCTGC 1 cut(s) 712
BspPI GGATC 5 cut(s) 735, 863, 939, 952, 1151
BspT104I TTCGAA 1 cut(s) 2472
BspT107I GGYRCC 2 cut(s) 374, 986
BspTI CTTAAG 2 cut(s) 481, 1172
BspTNI GGTCTC 1 cut(s) 1285
BsrDI GCAATG 6 cut(s) 31, 82, 979, 1429, 1707, 2781
BsrFI RCCGGY 1 cut(s) 989
BsrGI TGTACA 1 cut(s) 2670
BsrI ACTGG 3 cut(s) 570, 848, 2688
BssAI RCCGGY 1 cut(s) 989
BssECI CCNNGG 3 cut(s) 633, 948, 2130
BssMI GATC 9 cut(s) 133, 409, 727, 855, 944, 1156, 1240, 2728, 2791
BssNAI GTATAC 2 cut(s) 875, 1118
BssSI CACGAG 1 cut(s) 1980
BssT1I CCWWGG 2 cut(s) 633, 948
Bst1107I GTATAC 2 cut(s) 875, 1118
Bst2BI CACGAG 1 cut(s) 1980
Bst2UI CCWGG 1 cut(s) 2823
Bst4CI ACNGT 3 cut(s) 180, 211, 1296
Bst6I CTCTTC 7 cut(s) 237, 551, 957, 1208, 1505, 1710, 2094
BstAFI CTTAAG 2 cut(s) 481, 1172
BstAPI GCANNNNNTGC 3 cut(s) 1985, 1994, 2183
BstAUI TGTACA 1 cut(s) 2670
BstBAI YACGTR 2 cut(s) 316, 878
BstBI TTCGAA 1 cut(s) 2472
BstC8I GCNNGC 1 cut(s) 2498
BstF5I GGATG 5 cut(s) 39, 201, 625, 853, 1699
BstFNI CGCG 2 cut(s) 1002, 2170
BstH2I RGCGCY 1 cut(s) 770
BstHHI GCGC 3 cut(s) 769, 1636, 2170
BstKTI GATC 9 cut(s) 136, 412, 730, 858, 947, 1159, 1243, 2731, 2794
BstMAI GTCTC 4 cut(s) 919, 1285, 1439, 2054
BstMBI GATC 9 cut(s) 133, 409, 727, 855, 944, 1156, 1240, 2728, 2791
BstMWI GCNNNNNNNGC 8 cut(s) 1985, 1994, 2167, 2174, 2183, 2189, 2497, 2674
BstNI CCWGG 1 cut(s) 2823
BstSCI CCNGG 1 cut(s) 2821
BstSFI CTRYAG 2 cut(s) 1551, 2705
BstUI CGCG 2 cut(s) 1002, 2170
BstX2I RGATCY 3 cut(s) 944, 1156, 1240
BstYI RGATCY 3 cut(s) 944, 1156, 1240
BstZ17I GTATAC 2 cut(s) 875, 1118
BsuRI GGCC 1 cut(s) 2129
BtrI CACGTC 1 cut(s) 2064
BtsCI GGATG 5 cut(s) 39, 201, 625, 853, 1699
BtsI GCAGTG 1 cut(s) 2394
BtsIMutI CAGTG 3 cut(s) 1828, 2394, 2533
BveI ACCTGC 1 cut(s) 712
Cac8I GCNNGC 1 cut(s) 2498
CaiI CAGNNNCTG 2 cut(s) 1994, 2183
CciI TCATGA 2 cut(s) 325, 1222
CfoI GCGC 3 cut(s) 769, 1636, 2170
Cfr10I RCCGGY 1 cut(s) 989
Cfr13I GGNCC 1 cut(s) 475
Csp6I GTAC 4 cut(s) 375, 1946, 2648, 2671
CviAII CATG 9 cut(s) 52, 72, 160, 326, 452, 941, 1121, 1223, 1267
CviQI GTAC 4 cut(s) 375, 1946, 2648, 2671
DpnI GATC 9 cut(s) 135, 411, 729, 857, 946, 1158, 1242, 2730, 2793
DpnII GATC 9 cut(s) 133, 409, 727, 855, 944, 1156, 1240, 2728, 2791
DraI TTTAAA 1 cut(s) 739
EaeI YGGCCR 1 cut(s) 2127
Eam1104I CTCTTC 7 cut(s) 237, 551, 957, 1208, 1505, 1710, 2094
EarI CTCTTC 7 cut(s) 237, 551, 957, 1208, 1505, 1710, 2094
Eco130I CCWWGG 2 cut(s) 633, 948
Eco31I GGTCTC 1 cut(s) 1285
Eco32I GATATC 2 cut(s) 169, 867
Eco47I GGWCC 1 cut(s) 475
Eco47III AGCGCT 1 cut(s) 768
Eco57I CTGAAG 3 cut(s) 1566, 1734, 2736
Eco72I CACGTG 1 cut(s) 316
Eco88I CYCGRG 1 cut(s) 340
EcoRI GAATTC 2 cut(s) 335, 503
EcoRII CCWGG 1 cut(s) 2821
EcoRV GATATC 2 cut(s) 169, 867
EcoT14I CCWWGG 2 cut(s) 633, 948
EcoT22I ATGCAT 1 cut(s) 1709
ErhI CCWWGG 2 cut(s) 633, 948
Esp3I CGTCTC 1 cut(s) 2054
FaeI CATG 9 cut(s) 55, 75, 163, 329, 455, 944, 1124, 1226, 1270
FalI AAGNNNNNCTT 2 cut(s) 2596, 2628
FaqI GGGAC 1 cut(s) 502
FatI CATG 9 cut(s) 51, 71, 159, 325, 451, 940, 1120, 1222, 1266
FauNDI CATATG 4 cut(s) 396, 809, 1179, 2357
FbaI TGATCA 1 cut(s) 2791
FblI GTMKAC 2 cut(s) 874, 1117
FokI GGATG 5 cut(s) 46, 208, 632, 860, 1706
FspAI RTGCGCAY 1 cut(s) 1635
FspI TGCGCA 1 cut(s) 1635
GlaI GCGC 3 cut(s) 768, 1635, 2169
GsaI CCCAGC 1 cut(s) 450
HaeII RGCGCY 1 cut(s) 770
HaeIII GGCC 1 cut(s) 2129
HapII CCGG 1 cut(s) 990
HhaI GCGC 3 cut(s) 769, 1636, 2170
Hin1II CATG 9 cut(s) 55, 75, 163, 329, 455, 944, 1124, 1226, 1270
Hin6I GCGC 3 cut(s) 767, 1634, 2168
HinP1I GCGC 3 cut(s) 767, 1634, 2168
HincII GTYRAC 4 cut(s) 183, 2069, 2258, 2440
HindII GTYRAC 4 cut(s) 183, 2069, 2258, 2440
HindIII AAGCTT 3 cut(s) 1644, 2375, 2762
HpaII CCGG 1 cut(s) 990
HpyAV CCTTC 6 cut(s) 286, 746, 846, 947, 1264, 2415
HpyCH4III ACNGT 3 cut(s) 180, 211, 1296
HpyCH4IV ACGT 5 cut(s) 315, 877, 2063, 2543, 2560
HpyF10VI GCNNNNNNNGC 8 cut(s) 1985, 1994, 2167, 2174, 2183, 2189, 2497, 2674
HpySE526I ACGT 5 cut(s) 315, 877, 2063, 2543, 2560
Hsp92II CATG 9 cut(s) 55, 75, 163, 329, 455, 944, 1124, 1226, 1270
HspAI GCGC 3 cut(s) 767, 1634, 2168
KpnI GGTACC 1 cut(s) 378
Ksp22I TGATCA 1 cut(s) 2791
Kzo9I GATC 9 cut(s) 133, 409, 727, 855, 944, 1156, 1240, 2728, 2791
LmnI GCTCC 7 cut(s) 363, 792, 1969, 2140, 2329, 2488, 2842
LweI GCATC 7 cut(s) 713, 880, 1037, 1091, 1621, 1975, 2164
MaeII ACGT 5 cut(s) 315, 877, 2063, 2543, 2560
MaeIII GTNAC 6 cut(s) 203, 235, 280, 300, 1719, 2566
MalI GATC 9 cut(s) 135, 411, 729, 857, 946, 1158, 1242, 2730, 2793
MboI GATC 9 cut(s) 133, 409, 727, 855, 944, 1156, 1240, 2728, 2791
MflI RGATCY 3 cut(s) 944, 1156, 1240
MlyI GAGTC 6 cut(s) 146, 374, 1136, 1727, 1772, 2111
MmeI TCCRAC 2 cut(s) 2118, 2307
Mph1103I ATGCAT 1 cut(s) 1709
MroXI GAANNNNTTC 3 cut(s) 335, 687, 1316
MslI CAYNNNNRTG 1 cut(s) 318
MspA1I CMGCKG 7 cut(s) 251, 1163, 1604, 1994, 2030, 2183, 2219
MspCI CTTAAG 2 cut(s) 481, 1172
MspI CCGG 1 cut(s) 990
MspR9I CCNGG 1 cut(s) 2823
Mva1269I GAATGC 2 cut(s) 235, 420
MvaI CCWGG 1 cut(s) 2823
MvnI CGCG 2 cut(s) 1002, 2170
MwoI GCNNNNNNNGC 8 cut(s) 1985, 1994, 2167, 2174, 2183, 2189, 2497, 2674
NdeI CATATG 4 cut(s) 396, 809, 1179, 2357
NdeII GATC 9 cut(s) 133, 409, 727, 855, 944, 1156, 1240, 2728, 2791
NlaIII CATG 9 cut(s) 55, 75, 163, 329, 455, 944, 1124, 1226, 1270
NlaIV GGNNCC 3 cut(s) 376, 946, 988
NmeAIII GCCGAG 1 cut(s) 2155
NmuCI GTSAC 4 cut(s) 203, 280, 1719, 2566
NsbI TGCGCA 1 cut(s) 1635
NsiI ATGCAT 1 cut(s) 1709
NspV TTCGAA 1 cut(s) 2472
OliI CACNNNNGTG 1 cut(s) 318
PagI TCATGA 2 cut(s) 325, 1222
PaqCI CACCTGC 1 cut(s) 712
PctI GAATGC 2 cut(s) 235, 420
PdmI GAANNNNTTC 3 cut(s) 335, 687, 1316
PfeI GAWTC 5 cut(s) 121, 1338, 1460, 2024, 2213
PflFI GACNNNGTC 1 cut(s) 209
PfoI TCCNGGA 1 cut(s) 2821
PleI GAGTC 6 cut(s) 146, 373, 1135, 1726, 1771, 2110
PmaCI CACGTG 1 cut(s) 316
PmlI CACGTG 1 cut(s) 316
PpsI GAGTC 6 cut(s) 146, 373, 1135, 1726, 1771, 2110
Ppu21I YACGTR 2 cut(s) 316, 878
PshBI ATTAAT 1 cut(s) 564
Psp1406I AACGTT 1 cut(s) 2543
Psp6I CCWGG 1 cut(s) 2821
PspCI CACGTG 1 cut(s) 316
PspFI CCCAGC 1 cut(s) 446
PspGI CCWGG 1 cut(s) 2821
PspN4I GGNNCC 3 cut(s) 376, 946, 988
PspPI GGNCC 1 cut(s) 475
PstI CTGCAG 1 cut(s) 1555
PstNI CAGNNNCTG 2 cut(s) 1994, 2183
PsuI RGATCY 3 cut(s) 944, 1156, 1240
PsyI GACNNNGTC 1 cut(s) 209
PvuII CAGCTG 7 cut(s) 251, 1163, 1604, 1994, 2030, 2183, 2219
RsaI GTAC 4 cut(s) 376, 1947, 2649, 2672
RsaNI GTAC 4 cut(s) 375, 1946, 2648, 2671
RseI CAYNNNNRTG 1 cut(s) 318
Sau3AI GATC 9 cut(s) 133, 409, 727, 855, 944, 1156, 1240, 2728, 2791
Sau96I GGNCC 1 cut(s) 475
SchI GAGTC 6 cut(s) 146, 374, 1136, 1727, 1772, 2111
ScrFI CCNGG 1 cut(s) 2823
SfaNI GCATC 7 cut(s) 713, 880, 1037, 1091, 1621, 1975, 2164
SfcI CTRYAG 2 cut(s) 1551, 2705
SfuI TTCGAA 1 cut(s) 2472
SinI GGWCC 1 cut(s) 475
SmiMI CAYNNNNRTG 1 cut(s) 318
SmlI CTYRAG 6 cut(s) 140, 481, 1172, 1499, 2034, 2223
SmoI CTYRAG 6 cut(s) 140, 481, 1172, 1499, 2034, 2223
SsiI CCGC 1 cut(s) 1000
SspI AATATT 2 cut(s) 1612, 2808
StyD4I CCNGG 1 cut(s) 2821
StyI CCWWGG 2 cut(s) 633, 948
TaaI ACNGT 3 cut(s) 180, 211, 1296
TaiI ACGT 5 cut(s) 318, 880, 2066, 2546, 2563
TaqI TCGA 8 cut(s) 412, 1320, 1595, 2007, 2196, 2472, 2594, 2727
TatI WGTACW 3 cut(s) 1945, 2647, 2670
TfiI GAWTC 5 cut(s) 121, 1338, 1460, 2024, 2213
TscAI CASTG 3 cut(s) 1828, 2394, 2533
TseFI GTSAC 4 cut(s) 203, 280, 1719, 2566
Tsp45I GTSAC 4 cut(s) 203, 280, 1719, 2566
TspGWI ACGGA 1 cut(s) 399
TspRI CASTG 3 cut(s) 1828, 2394, 2533
Tth111I GACNNNGTC 1 cut(s) 209
Vha464I CTTAAG 2 cut(s) 481, 1172
VpaK11BI GGWCC 1 cut(s) 475
VspI ATTAAT 1 cut(s) 564
XapI RAATTY 7 cut(s) 335, 503, 1368, 2047, 2107, 2236, 2267
XcmI CCANNNNNNNNNTGG 2 cut(s) 193, 577
XmiI GTMKAC 2 cut(s) 874, 1117
XmnI GAANNNNTTC 3 cut(s) 335, 687, 1316
Zsp2I ATGCAT 1 cut(s) 1709
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.