Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003093

Physical Location & Seq

Genomic Coordinates Forward (+)

17317467 .. 17323056

Gene Structure 5590 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G41520.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3327 bp

ATGTCTCCTGCGGCGGTGGAGATTGGGTCTCCGGTTGAAAAAGTCTCTTCTGTTCTAAACCCTATGGAAAATTTCTCTGCATTTTTTCCGGAGAGTGTTCACTCTCACGATCAACGAACCATGGGCTCTTCGTTCTCCTTCGGATTTGGAGCTGGTTCAGGACAAACCACGAAGACTCGACACAAGCCGAGGCTCGTGAAATTGAGGAAGAACGGAAGAGAGGTGAAAAAACCTTCTTTTTCCGGCGAGATCCTCTCAGGTTTCAATCCGTTTGCGCCGCCGGGTAAAGGTAGTCTTCATATGAACAGTGGGAATGATAGAGATGCTGGCCAATCACCTGGGGATAAATGTTTTGTCTTTGGAGCTAGTGGGAACAGTTCTGGTGCAAAATCTAGTCCAGGCAATGCCACAATAGCTTCTTTGTCTGATGAAGAGGAGTTTAGTACACCTATAGGGGACTCTGAGTTGGATTCGGAATCCATTAAAGAACATTCAAATGGAGTTAGGGGAAAGGTTGATAATGATCGGGAAAACATCAGACCGTGTAGTGAGAGCACAATTTTTGATGCCACAAATGGATTTAGGTTTGATGGTGGTGTTAACGGAAGCTGGAAAAGTGTTGAGAATCCAGATGCTGTCAAGGAGTTTTTTCGAAGACAGAATGGCATGGACAAGGCATCAGCGAGTAAATCTTGTAGCAAGTCTAACAGTGTACAATATGCTCATGGTAAAAATAGGGATGATCCTGAATTGAACCTGCTTGCTGACATGGAGAAGCTTAATATCAGTGATTCCAGAGTTCATGGTGGCAGCGACTATGAGGAAGCAAGCAAATCCAATAAGACACCTGTATTTACTTTTAGTAGCTTTGGAAAGGTTGATCCTATATGTAAAGAAGGTGCGGCGACATCAGAGCCATACTCGTTCAGTTCCAATGGTTTTCAGCAAAGTAATAATGCGTCGGGTGAAAACCCCACTTTTCATTCCCAGACCACCTACGGAAACAACTTAACAAACACTAGCTTTGCTACAAAAACATTCTTTGATGATTTCAAAGTACCTGAATGGGATCCTTCGTTGCTTAAGGACAGTCTGTTTCCAGAAGTAGACAGAAATCCAGTACATGCGCGAAGTAATCGTTCGTCCAAGGACAAGAGATCAAAGAAAGTTAAGGAAAAAATGAAACAGGGTGAGCCAGATCGATGCAATGGTCAAACTGCTGAGGGAATTGAGGCTCAAGAAAAACTCAATTCCCCTGGATATTGCTCACCCATGGATTATTCTCCTTATCAAGGTGACAAAACGAGCAATCAATTTCCAACAGAAACTCCCCTGGCACCATCACATTCAAGAGAACATATTGATTCCCGCTCTAGCAATGACTTTAAGGTTGCGTCAGCCAGGGATTCATCTCTCTTCACGGCAGAGGATCATGGGAGTACTTGTATTCCGAATTTTTCTTTCTCAGCGTCCACCTCTCAGGAAACAATACGACATAAAAAGCTTCAAGCTGTAAAGAAATATAGGAGGAAAGTTAACAACAGTTTGCCGAAAAGCAATCTTAATGCCACCATGCGAAACAATCAAGAGAATCAACCTGTGAATACAGGTCAAGCCAAACAGGACTCGGGCTCCACATCGATGATGCCTGATGTCTGTGAGGTTTGGCGACTAAGGGGAAATCAAGCCTACAAAAATGGTTATATGTCTAAAGCTGAGGAATGTTACACACATGGTATTAATTCTTCTCCGTCAAAAGATAATTCAGAATACTCTGTGAAGCCTCTTGCGCTTTGCTATGGTAACCGCGCCGCAGCACGGATTTCTCTTGGAAGATTGAGGGAGGCTATAAGCGACTGTGAGATGGCTGCCTCACTTGATCCTAGCTACATTAAAGCGTATATGAGAGCTGCAAATTGTCATCTTGTGCTGGGGGAACTTGGATCAGCAGTGCAGTATTTTAATAAATGCATGAAATCCACCTCTAGTGTCTGCTTGGATCGACGAACTACTATAGAAGCAGCTGAAGGTTTACAACAGGCTCAAAGGGTAGCTGACTTTACCAGCTGTGCATCCATATTTTTGGAAAAGAGAACACCTGATGGCGCATCTGACGCATTGGTTCCAATTGCCAATGCCTTATCAATTAGTTCATGCTCAGATAAATTGCTTCAAATGAAGGCCGAGGCCCTATTTATGATCCGACGATATAAAGAAGTTATTGAGCTTTGTGAGAATACCCTTCAGACTGCTGAGAGGAATTTTGTTTCAGCAGGGATTGGTGGGACGACAAATGTTAATGGATTAGGGTCTACGTATCACTCGCTAATAGTTTGGAGATGGAACAAAATTTCCAAGTCGCACTTCTACTTGGGAAACCTTGAGAAGGCCCTTGATATATTAGAAAAGTTACAGCAAGTGGAATATACCTGCAATGAAAATCAGGAAGAGTGTCGTGAGTCACCAGCTTCTTTAGTGGCCACCATTTCTGAACTCTTACGTTACAAGAACGCAGGTAATGAAGCTGTTCGGGACAGAAAGTATATGGAAGCAGTAGAGCAGTATACTGCTGCACTATCAAGAAATGTTGACTCACGCCCTTTTGCAGCAATTTGCTTCTGCAATCGTGCGGCTGCTAATCAGGCCCTAGTTCAAATTGCTGATGCAATTGCCGACTGTAGTCTTGCCATGGCTCTTGATGAAAACTACACAAAGGCAGTTTCCAGGAGAGCCACATTACATGAGATGATCAGAGACTATGATCAAGCAGCTAGTGATCTCCAGAGACTTATCAGCATTCTCGTAAAGCAAAGTGATAAAACAAAAACGCCAGAGACATCTGTCGATCGTGCAAGTAGCAGGAAAGAACTAAAGCAGGCCCGTCAACGGTTGTCTGTGATGGAAGAAAAATCTAAAGAGGGAATTCATCTGGATTTCTTCCTAATCATGGGAGTGAAGACATCTGACTCTGCTGCTGATATCAAAAAGGCATACCGCAAAGCAGCTCTTAGACATCACCCAGACAAAGCTGCACAGATTCTTGTCAGAAGCGAAAGTGAAGGACCATGGTTGAAGGAGATATTAGAAGAGGTTCACAAGGGTGCAGATAGGCTCTTCAAAATGATTGGAGAGGCATATTCAGTTCTTTCTGACCCAACTAAGAGGTCGGATTATGAACTTGAGGAAGAAATTAGAAAAGCCAGGGCATCTAGAGAAAGCTACAGGAGCAGAAAGGCTGCAGAAGCAAGTAGCCCTCCATATCAGACAAGCAGGCGATACTGGAAGGACAGTTGGAGGACAAACCAAAACACGCCTTCTTGGTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006457 GO:0006458 GO:0008150 GO:0009987 GO:0031072 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0051084 GO:0051085 GO:0061077 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ TPR_8

Protein Analysis

1108

Amino Acids

122.78

Weight (kDa)

8.4

Isoelectric Point (pI)

45.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	878 - 910	9.5e-08	DnaJ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003093)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41520 AT2G41520 AT2G41520
fragaria_vesca	FvH4_2g04200 FvH4_6g24600 FvH4_6g24600
malus_domestica	MD12G1083200.v1.1 MD14G1078300.v1.1
prunus_persica	Prupe.7G052600_v2.0.a1 Prupe.7G052600_v2.0.a1 Prupe.7G052600_v2.0.a1 Prupe.7G052600_v2.0.a1
pyrus_communis	pycom12g07010
rosa_chinensis	RchiOBHm_Chr3g0483931 RchiOBHm_Chr6g0253551
rosa_laevigata	RLG00000015000 RLG00000023251
rosa_multiflora	Rmu_sc0002252.1_g000005
rosa_roxburghii	Rroxscaffold_6G00398000 Rroxscaffold_7G00211760
rosa_rugosa	Rorug03G0209000 Rorug05G0545000 Rorug05G0545000
rosa_samantha	Rh3AG257600 Rh3BG294400 Rh3CG292200 Rh3DG287400 Rh6AG060100 Rh6AG060200 Rh6AG060300 Rh6BG054200 Rh6CG053900 Rh6CG054000 Rh6DG051400 Rh6DG051500
rosa_wichuraiana	Rw3G023280 Rw6G005380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	765, 2438, 2504
AccB1I	GGYRCC	1 cut(s)	1336
AccBSI	CCGCTC	1 cut(s)	1371
AccI	GTMKAC	3 cut(s)	1107, 2312, 2564
AccII	CGCG	2 cut(s)	1129, 1809
AccIII	TCCGGA	1 cut(s)	88
AciI	CCGC	9 cut(s)	11, 14, 278, 902, 1369, 1807, 1812, 2630, 2995
AcoI	YGGCCR	2 cut(s)	328, 2478
AcsI	RAATTY	5 cut(s)	70, 1453, 2260, 2349, 2922
AcuI	CTGAAG	2 cut(s)	2046, 2228
AfaI	GTAC	5 cut(s)	445, 714, 1059, 1122, 1441
AfiI	CCNNNNNNNGG	6 cut(s)	287, 1292, 1818, 2386, 2886, 2947
AflII	CTTAAG	1 cut(s)	1082
AjnI	CCWGG	7 cut(s)	337, 397, 1255, 1332, 1400, 2723, 3200
AjuI	GAANNNNNNNTTGG	2 cut(s)	2348, 2380
AleI	CACNNNNGTG	1 cut(s)	3099
AloI	GAACNNNNNNTCC	2 cut(s)	2336, 2368
Alw21I	GWGCWC	1 cut(s)	557
Alw26I	GTCTC	6 cut(s)	9, 33, 49, 2748, 2779, 2828
AlwNI	CAGNNNCTG	1 cut(s)	635
Ama87I	CYCGRG	1 cut(s)	1627
Aor13HI	TCCGGA	1 cut(s)	88
AoxI	GGCC	7 cut(s)	328, 2181, 2187, 2388, 2478, 2643, 2877
ApoI	RAATTY	5 cut(s)	70, 1453, 2260, 2349, 2922
AseI	ATTAAT	1 cut(s)	1740
Asp700I	GAANNNNTTC	2 cut(s)	2526, 3090
AspLEI	GCGC	5 cut(s)	277, 1129, 1792, 1811, 2108
AspS9I	GGNCC	5 cut(s)	2188, 2389, 2644, 2878, 3062
AsuC2I	CCSGG	1 cut(s)	282
AsuHPI	GGTGA	8 cut(s)	235, 327, 977, 1202, 1260, 1307, 2454, 3008
AsuII	TTCGAA	1 cut(s)	652
AvaI	CYCGRG	1 cut(s)	1627
AvaII	GGWCC	1 cut(s)	3062
BalI	TGGCCA	2 cut(s)	330, 2480
BamHI	GGATCC	1 cut(s)	1069
BanI	GGYRCC	1 cut(s)	1336
BanII	GRGCYC	2 cut(s)	128, 1634
BarI	GAAGNNNNNNTAC	2 cut(s)	1729, 1761
BauI	CACGAG	1 cut(s)	194
BbsI	GAAGAC	4 cut(s)	179, 287, 661, 2963
Bbv12I	GWGCWC	1 cut(s)	557
BbvCI	CCTCAGC	2 cut(s)	1221, 1716
BccI	CCATC	6 cut(s)	584, 1348, 1858, 2096, 2334, 2893
BceAI	ACGGC	1 cut(s)	1437
BciT130I	CCWGG	7 cut(s)	339, 399, 1257, 1334, 1402, 2725, 3202
BclI	TGATCA	2 cut(s)	2748, 2761
BcnI	CCSGG	1 cut(s)	282
BcoDI	GTCTC	6 cut(s)	9, 33, 49, 2748, 2779, 2828
BfaI	CTAG	9 cut(s)	366, 393, 1020, 1374, 1884, 1986, 2648, 2772, 3210
BfmI	CTRYAG	5 cut(s)	450, 2013, 2677, 3220, 3237
BfrI	CTTAAG	1 cut(s)	1082
BfuAI	ACCTGC	3 cut(s)	765, 2438, 2504
BmcAI	AGTACT	1 cut(s)	1441
Bme1390I	CCNGG	8 cut(s)	282, 339, 399, 1257, 1334, 1402, 2725, 3202
Bme18I	GGWCC	1 cut(s)	3062
BmeT110I	CYCGRG	1 cut(s)	1627
BmgT120I	GGNCC	5 cut(s)	2188, 2389, 2644, 2878, 3062
BmiI	GGNNCC	4 cut(s)	1071, 1338, 1633, 2124
BmrFI	CCNGG	8 cut(s)	282, 339, 399, 1257, 1334, 1402, 2725, 3202
BoxI	GACNNNNGTC	2 cut(s)	2679, 2840
BpiI	GAAGAC	4 cut(s)	179, 287, 661, 2963
BplI	GAGNNNNNCTC	4 cut(s)	239, 271, 905, 937
BpmI	CTGGAG	1 cut(s)	2765
Bpu10I	CCTNAGC	2 cut(s)	1221, 1716
Bpu14I	TTCGAA	1 cut(s)	652
BpuEI	CTTGAG	3 cut(s)	1221, 2402, 3200
BpuMI	CCSGG	1 cut(s)	282
Bsa29I	ATCGAT	2 cut(s)	1201, 1640
BsaAI	YACGTR	1 cut(s)	2316
BsaBI	GATNNNNATC	1 cut(s)	522
BsaI	GGTCTC	1 cut(s)	33
BsaWI	WCCGGW	2 cut(s)	31, 88
BsaXI	ACNNNNNCTCC	8 cut(s)	11, 41, 1312, 1342, 1429, 1459, 1616, 1646
Bsc4I	CCNNNNNNNGG	6 cut(s)	287, 1292, 1818, 2386, 2886, 2947
Bse1I	ACTGG	2 cut(s)	1118, 3284
Bse3DI	GCAATG	4 cut(s)	409, 1213, 1384, 2440
Bse8I	GATNNNNATC	1 cut(s)	522
BseAI	TCCGGA	1 cut(s)	88
BseBI	CCWGG	7 cut(s)	339, 399, 1257, 1334, 1402, 2725, 3202
BseCI	ATCGAT	2 cut(s)	1201, 1640
BseGI	GGATG	2 cut(s)	745, 2072
BseJI	GATNNNNATC	1 cut(s)	522
BseLI	CCNNNNNNNGG	6 cut(s)	287, 1292, 1818, 2386, 2886, 2947
BseMI	GCAATG	4 cut(s)	409, 1213, 1384, 2440
BseMII	CTCAG	8 cut(s)	270, 453, 1212, 1479, 1493, 1707, 2172, 2244
BseNI	ACTGG	2 cut(s)	1118, 3284
BseRI	GAGGAG	1 cut(s)	449
BseYI	CCCAGC	1 cut(s)	1930
BsgI	GTGCAG	4 cut(s)	1973, 2556, 3015, 3123
Bsh1236I	CGCG	2 cut(s)	1129, 1809
Bsh1285I	CGRYCG	1 cut(s)	2848
BshFI	GGCC	7 cut(s)	330, 2183, 2189, 2390, 2480, 2645, 2879
BshNI	GGYRCC	1 cut(s)	1336
BshVI	ATCGAT	2 cut(s)	1201, 1640
BsiEI	CGRYCG	1 cut(s)	2848
BsiHKAI	GWGCWC	1 cut(s)	557
BsiHKCI	CYCGRG	1 cut(s)	1627
BsiSI	CCGG	4 cut(s)	32, 89, 243, 281
BslFI	GGGAC	3 cut(s)	470, 2299, 2546
BslI	CCNNNNNNNGG	6 cut(s)	287, 1292, 1818, 2386, 2886, 2947
BsmAI	GTCTC	6 cut(s)	9, 33, 49, 2748, 2779, 2828
BsmFI	GGGAC	3 cut(s)	470, 2299, 2546
BsmI	GAATGC	1 cut(s)	2796
BsnI	GGCC	7 cut(s)	330, 2183, 2189, 2390, 2480, 2645, 2879
Bso31I	GGTCTC	1 cut(s)	33
BsoBI	CYCGRG	1 cut(s)	1627
Bsp119I	TTCGAA	1 cut(s)	652
Bsp1286I	GDGCHC	3 cut(s)	128, 557, 1634
Bsp13I	TCCGGA	1 cut(s)	88
Bsp1407I	TGTACA	1 cut(s)	712
Bsp19I	CCATGG	4 cut(s)	120, 1272, 2688, 3065
BspACI	CCGC	9 cut(s)	11, 14, 278, 902, 1369, 1807, 1812, 2630, 2995
BspANI	GGCC	7 cut(s)	330, 2183, 2189, 2390, 2480, 2645, 2879
BspCNI	CTCAG	8 cut(s)	269, 454, 1213, 1478, 1492, 1708, 2171, 2245
BspDI	ATCGAT	2 cut(s)	1201, 1640
BspEI	TCCGGA	1 cut(s)	88
BspFNI	CGCG	2 cut(s)	1129, 1809
BspLI	GGNNCC	4 cut(s)	1071, 1338, 1633, 2124
BspMAI	CTGCAG	1 cut(s)	3241
BspMI	ACCTGC	3 cut(s)	765, 2438, 2504
BspQI	GCTCTTC	2 cut(s)	133, 3119
BspT104I	TTCGAA	1 cut(s)	652
BspT107I	GGYRCC	1 cut(s)	1336
BspTI	CTTAAG	1 cut(s)	1082
BspTNI	GGTCTC	1 cut(s)	33
BsrBI	CCGCTC	1 cut(s)	1371
BsrDI	GCAATG	4 cut(s)	409, 1213, 1384, 2440
BsrGI	TGTACA	1 cut(s)	712
BsrI	ACTGG	2 cut(s)	1118, 3284
BssNAI	GTATAC	1 cut(s)	2565
BssSI	CACGAG	1 cut(s)	194
BssT1I	CCWWGG	5 cut(s)	120, 1146, 1272, 2688, 3065
Bst1107I	GTATAC	1 cut(s)	2565
Bst2BI	CACGAG	1 cut(s)	194
Bst2UI	CCWGG	7 cut(s)	339, 399, 1257, 1334, 1402, 2725, 3202
Bst6I	CTCTTC	8 cut(s)	52, 133, 211, 426, 1421, 2442, 3081, 3119
BstAFI	CTTAAG	1 cut(s)	1082
BstAUI	TGTACA	1 cut(s)	712
BstBAI	YACGTR	1 cut(s)	2316
BstBI	TTCGAA	1 cut(s)	652
BstC8I	GCNNGC	5 cut(s)	328, 762, 829, 2877, 3272
BstDSI	CCRYGG	4 cut(s)	120, 1272, 2688, 3065
BstEII	GGTNACC	1 cut(s)	1802
BstENI	CCTNNNNNAGG	2 cut(s)	1290, 2384
BstF5I	GGATG	2 cut(s)	745, 2072
BstFNI	CGCG	2 cut(s)	1129, 1809
BstHHI	GCGC	5 cut(s)	277, 1129, 1792, 1811, 2108
BstMAI	GTCTC	6 cut(s)	9, 33, 49, 2748, 2779, 2828
BstMCI	CGRYCG	1 cut(s)	2848
BstMWI	GCNNNNNNNGC	6 cut(s)	413, 1789, 2114, 2642, 3225, 3242
BstNI	CCWGG	7 cut(s)	339, 399, 1257, 1334, 1402, 2725, 3202
BstNSI	RCATGY	1 cut(s)	1127
BstPAI	GACNNNNGTC	2 cut(s)	2679, 2840
BstPI	GGTNACC	1 cut(s)	1802
BstSCI	CCNGG	8 cut(s)	280, 337, 397, 1255, 1332, 1400, 2723, 3200
BstSFI	CTRYAG	5 cut(s)	450, 2013, 2677, 3220, 3237
BstSNI	TACGTA	1 cut(s)	2316
BstUI	CGCG	2 cut(s)	1129, 1809
BstV2I	GAAGAC	4 cut(s)	179, 287, 661, 2963
BstX2I	RGATCY	2 cut(s)	249, 1069
BstXI	CCANNNNNNTGG	2 cut(s)	338, 2083
BstYI	RGATCY	2 cut(s)	249, 1069
BstZ17I	GTATAC	1 cut(s)	2565
Bsu15I	ATCGAT	2 cut(s)	1201, 1640
BsuRI	GGCC	7 cut(s)	330, 2183, 2189, 2390, 2480, 2645, 2879
BsuTUI	ATCGAT	2 cut(s)	1201, 1640
BtgI	CCRYGG	4 cut(s)	120, 1272, 2688, 3065
BtsCI	GGATG	2 cut(s)	745, 2072
BtsI	GCAGTG	1 cut(s)	1956
BtsIMutI	CAGTG	4 cut(s)	313, 715, 793, 1956
BveI	ACCTGC	3 cut(s)	765, 2438, 2504
Cac8I	GCNNGC	5 cut(s)	328, 762, 829, 2877, 3272
CaiI	CAGNNNCTG	1 cut(s)	635
CfoI	GCGC	5 cut(s)	277, 1129, 1792, 1811, 2108
Cfr13I	GGNCC	5 cut(s)	2188, 2389, 2644, 2878, 3062
ClaI	ATCGAT	2 cut(s)	1201, 1640
CseI	GACGC	4 cut(s)	948, 1383, 1458, 2123
Csp6I	GTAC	5 cut(s)	444, 713, 1058, 1121, 1440
CviQI	GTAC	5 cut(s)	444, 713, 1058, 1121, 1440
EaeI	YGGCCR	2 cut(s)	328, 2478
Eam1104I	CTCTTC	8 cut(s)	52, 133, 211, 426, 1421, 2442, 3081, 3119
EarI	CTCTTC	8 cut(s)	52, 133, 211, 426, 1421, 2442, 3081, 3119
Eco105I	TACGTA	1 cut(s)	2316
Eco130I	CCWWGG	5 cut(s)	120, 1146, 1272, 2688, 3065
Eco24I	GRGCYC	2 cut(s)	128, 1634
Eco31I	GGTCTC	1 cut(s)	33
Eco32I	GATATC	1 cut(s)	2980
Eco47I	GGWCC	1 cut(s)	3062
Eco57I	CTGAAG	2 cut(s)	2046, 2228
Eco88I	CYCGRG	1 cut(s)	1627
Eco91I	GGTNACC	1 cut(s)	1802
EcoNI	CCTNNNNNAGG	2 cut(s)	1290, 2384
EcoO109I	RGGNCCY	3 cut(s)	2188, 2389, 2644
EcoO65I	GGTNACC	1 cut(s)	1802
EcoRI	GAATTC	1 cut(s)	2922
EcoRII	CCWGG	7 cut(s)	337, 397, 1255, 1332, 1400, 2723, 3200
EcoRV	GATATC	1 cut(s)	2980
EcoT14I	CCWWGG	5 cut(s)	120, 1146, 1272, 2688, 3065
EcoT22I	ATGCAT	1 cut(s)	1973
EcoT38I	GRGCYC	2 cut(s)	128, 1634
ErhI	CCWWGG	5 cut(s)	120, 1146, 1272, 2688, 3065
FalI	AAGNNNNNCTT	6 cut(s)	279, 311, 2348, 2380, 2991, 3023
FaqI	GGGAC	3 cut(s)	470, 2299, 2546
FauI	CCCGC	1 cut(s)	1376
FauNDI	CATATG	1 cut(s)	300
FbaI	TGATCA	2 cut(s)	2748, 2761
FblI	GTMKAC	3 cut(s)	1107, 2312, 2564
FokI	GGATG	2 cut(s)	752, 2059
FriOI	GRGCYC	2 cut(s)	128, 1634
FspBI	CTAG	9 cut(s)	366, 393, 1020, 1374, 1884, 1986, 2648, 2772, 3210
GlaI	GCGC	5 cut(s)	276, 1128, 1791, 1810, 2107
GsaI	CCCAGC	1 cut(s)	1934
GsuI	CTGGAG	1 cut(s)	2765
HaeIII	GGCC	7 cut(s)	330, 2183, 2189, 2390, 2480, 2645, 2879
HapII	CCGG	4 cut(s)	32, 89, 243, 281
HgaI	GACGC	4 cut(s)	948, 1383, 1458, 2123
HhaI	GCGC	5 cut(s)	277, 1129, 1792, 1811, 2108
Hin6I	GCGC	5 cut(s)	275, 1127, 1790, 1809, 2106
HinP1I	GCGC	5 cut(s)	275, 1127, 1790, 1809, 2106
HincII	GTYRAC	4 cut(s)	601, 1537, 2590, 2885
HindII	GTYRAC	4 cut(s)	601, 1537, 2590, 2885
HindIII	AAGCTT	2 cut(s)	776, 1502
HpaI	GTTAAC	2 cut(s)	601, 1537
HpaII	CCGG	4 cut(s)	32, 89, 243, 281
HphI	GGTGA	8 cut(s)	235, 327, 977, 1202, 1260, 1307, 2454, 3008
Hpy99I	CGWCG	3 cut(s)	964, 2007, 2208
HpyCH4IV	ACGT	2 cut(s)	2315, 2500
HpyF10VI	GCNNNNNNNGC	6 cut(s)	413, 1789, 2114, 2642, 3225, 3242
HpySE526I	ACGT	2 cut(s)	2315, 2500
HspAI	GCGC	5 cut(s)	275, 1127, 1790, 1809, 2106
Kpn2I	TCCGGA	1 cut(s)	88
Ksp22I	TGATCA	2 cut(s)	2748, 2761
KspAI	GTTAAC	2 cut(s)	601, 1537
LguI	GCTCTTC	2 cut(s)	133, 3119
LmnI	GCTCC	4 cut(s)	149, 362, 1637, 3225
MaeI	CTAG	9 cut(s)	366, 393, 1020, 1374, 1884, 1986, 2648, 2772, 3210
MaeII	ACGT	2 cut(s)	2315, 2500
MaeIII	GTNAC	6 cut(s)	1295, 1724, 1802, 2409, 2460, 2501
MbiI	CCGCTC	1 cut(s)	1371
MfeI	CAATTG	2 cut(s)	2127, 2667
MflI	RGATCY	2 cut(s)	249, 1069
MhlI	GDGCHC	3 cut(s)	128, 557, 1634
MlsI	TGGCCA	2 cut(s)	330, 2480
MluNI	TGGCCA	2 cut(s)	330, 2480
MlyI	GAGTC	6 cut(s)	169, 452, 1619, 2468, 2585, 2960
MmeI	TCCRAC	5 cut(s)	447, 1343, 2227, 3147, 3272
Mox20I	TGGCCA	2 cut(s)	330, 2480
Mph1103I	ATGCAT	1 cut(s)	1973
MroI	TCCGGA	1 cut(s)	88
MroXI	GAANNNNTTC	2 cut(s)	2526, 3090
MscI	TGGCCA	2 cut(s)	330, 2480
MslI	CAYNNNNRTG	4 cut(s)	495, 1640, 2951, 3099
Msp20I	TGGCCA	2 cut(s)	330, 2480
MspA1I	CMGCKG	2 cut(s)	2024, 2067
MspCI	CTTAAG	1 cut(s)	1082
MspI	CCGG	4 cut(s)	32, 89, 243, 281
MspR9I	CCNGG	8 cut(s)	282, 339, 399, 1257, 1334, 1402, 2725, 3202
MunI	CAATTG	2 cut(s)	2127, 2667
Mva1269I	GAATGC	1 cut(s)	2796
MvaI	CCWGG	7 cut(s)	339, 399, 1257, 1334, 1402, 2725, 3202
MvnI	CGCG	2 cut(s)	1129, 1809
MwoI	GCNNNNNNNGC	6 cut(s)	413, 1789, 2114, 2642, 3225, 3242
NciI	CCSGG	1 cut(s)	282
NcoI	CCATGG	4 cut(s)	120, 1272, 2688, 3065
NdeI	CATATG	1 cut(s)	300
NlaIV	GGNNCC	4 cut(s)	1071, 1338, 1633, 2124
NmeAIII	GCCGAG	2 cut(s)	213, 2209
NmuCI	GTSAC	2 cut(s)	1295, 2460
NsiI	ATGCAT	1 cut(s)	1973
NspI	RCATGY	1 cut(s)	1127
NspV	TTCGAA	1 cut(s)	652
OliI	CACNNNNGTG	1 cut(s)	3099
PciSI	GCTCTTC	2 cut(s)	133, 3119
PctI	GAATGC	1 cut(s)	2796
PdmI	GAANNNNTTC	2 cut(s)	2526, 3090
PfeI	GAWTC	8 cut(s)	470, 476, 625, 791, 1364, 1406, 1591, 3037
PfoI	TCCNGGA	1 cut(s)	2723
Ple19I	CGATCG	1 cut(s)	2848
PleI	GAGTC	6 cut(s)	169, 452, 1619, 2467, 2585, 2960
PpsI	GAGTC	6 cut(s)	169, 452, 1619, 2467, 2585, 2960
Ppu21I	YACGTR	1 cut(s)	2316
PshAI	GACNNNNGTC	2 cut(s)	2679, 2840
PshBI	ATTAAT	1 cut(s)	1740
Psp6I	CCWGG	7 cut(s)	337, 397, 1255, 1332, 1400, 2723, 3200
PspEI	GGTNACC	1 cut(s)	1802
PspFI	CCCAGC	1 cut(s)	1930
PspGI	CCWGG	7 cut(s)	337, 397, 1255, 1332, 1400, 2723, 3200
PspN4I	GGNNCC	4 cut(s)	1071, 1338, 1633, 2124
PspPI	GGNCC	5 cut(s)	2188, 2389, 2644, 2878, 3062
PstI	CTGCAG	1 cut(s)	3241
PstNI	CAGNNNCTG	1 cut(s)	635
PsuI	RGATCY	2 cut(s)	249, 1069
PvuI	CGATCG	1 cut(s)	2848
PvuII	CAGCTG	2 cut(s)	2024, 2067
RsaI	GTAC	5 cut(s)	445, 714, 1059, 1122, 1441
RsaNI	GTAC	5 cut(s)	444, 713, 1058, 1121, 1440
RseI	CAYNNNNRTG	4 cut(s)	495, 1640, 2951, 3099
SapI	GCTCTTC	2 cut(s)	133, 3119
Sau96I	GGNCC	5 cut(s)	2188, 2389, 2644, 2878, 3062
ScaI	AGTACT	1 cut(s)	1441
SchI	GAGTC	6 cut(s)	169, 452, 1619, 2468, 2585, 2960
ScrFI	CCNGG	8 cut(s)	282, 339, 399, 1257, 1334, 1402, 2725, 3202
SduI	GDGCHC	3 cut(s)	128, 557, 1634
SfcI	CTRYAG	5 cut(s)	450, 2013, 2677, 3220, 3237
SfuI	TTCGAA	1 cut(s)	652
SinI	GGWCC	1 cut(s)	3062
SmiMI	CAYNNNNRTG	4 cut(s)	495, 1640, 2951, 3099
SmlI	CTYRAG	4 cut(s)	1082, 1236, 2381, 3179
SmoI	CTYRAG	4 cut(s)	1082, 1236, 2381, 3179
SnaBI	TACGTA	1 cut(s)	2316
SsiI	CCGC	9 cut(s)	11, 14, 278, 902, 1369, 1807, 1812, 2630, 2995
SspMI	CTAG	9 cut(s)	366, 393, 1020, 1374, 1884, 1986, 2648, 2772, 3210
StyD4I	CCNGG	8 cut(s)	280, 337, 397, 1255, 1332, 1400, 2723, 3200
StyI	CCWWGG	5 cut(s)	120, 1146, 1272, 2688, 3065
TaiI	ACGT	2 cut(s)	2318, 2503
TaqI	TCGA	6 cut(s)	178, 652, 1201, 1640, 2002, 2844
TatI	WGTACW	4 cut(s)	443, 712, 1120, 1439
TauI	GCSGC	5 cut(s)	14, 280, 905, 1814, 2633
TfiI	GAWTC	8 cut(s)	470, 476, 625, 791, 1364, 1406, 1591, 3037
TscAI	CASTG	4 cut(s)	313, 715, 793, 1956
TseFI	GTSAC	2 cut(s)	1295, 2460
Tsp45I	GTSAC	2 cut(s)	1295, 2460
TspGWI	ACGGA	6 cut(s)	228, 258, 618, 1014, 1740, 1834
TspRI	CASTG	4 cut(s)	313, 715, 793, 1956
Vha464I	CTTAAG	1 cut(s)	1082
VpaK11BI	GGWCC	1 cut(s)	3062
VspI	ATTAAT	1 cut(s)	1740
XagI	CCTNNNNNAGG	2 cut(s)	1290, 2384
XapI	RAATTY	5 cut(s)	70, 1453, 2260, 2349, 2922
XbaI	TCTAGA	1 cut(s)	3209
XceI	RCATGY	1 cut(s)	1127
XmiI	GTMKAC	3 cut(s)	1107, 2312, 2564
XmnI	GAANNNNTTC	2 cut(s)	2526, 3090
XspI	CTAG	9 cut(s)	366, 393, 1020, 1374, 1884, 1986, 2648, 2772, 3210
ZrmI	AGTACT	1 cut(s)	1441
Zsp2I	ATGCAT	1 cut(s)	1973

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.