Rh3CG292200

dnaJ homolog subfamily C member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0003093
Physical Location & Seq
Reverse (-)
29759592 .. 29768619
9028 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG292200.1

Sequence Viewer

Length: 3672 bp
ATGACGCCGGCGGCGGCGGACGTCCGGTCCCCGATTACCTCTAAACCCTCCGGCAATCCTCAAAACCCTAAACCTTCATCGGAGGAGACGCCTTCCTCTAACCCCTTCAATTTCAATGCTGCTGGTTCCGACGGTCCGTCGTGTCCAAATGTGCCGTCACGATCAGCTCGGCCGCGGCCGAGGTTGGCGAAGCACAGGAGGAAGCAGCATGCGAATGCGGGGTCGAGAACTGAGACGGCTGGGCCGGAGGTCAACCCGTTTTGCTCGGTAAGTGGTGGTGCTGCTACTAGTGTTTTTAATCAGTTCAGTTTTCCGAGTGGTGGTGTGGGTTTTGTGTTTGCCGCTACATTGAGTGGTGTTGATGAGCGGGCTCAGGTGAACGGTGGGGATGGTAGAGAGTTCGGTGAGGTTGAGAGTGTGAGTGCTAAGCAGGATGATCCTCCGGGGCCGAGTTCGTGTGGGGAGAGGAGAGAATGTGACACTGATCAACGTGGAAAAGGGATATTCGAGTGTGATCAGAACCATTCAGCTCCGAATTTGAGTGCCGAAAATGGAGAATCGGCAGAATGTGTTGAGAGACTCGGTGATTTTGGGTGTGGTTCAGAGGTAGGACGGAGTGAATATTGTGAAAATGAGGGGAAGTCAGGTAATGACTCTAGTGGTATTGGTTTTGTGTTTGGTTCCGGTTGGTTTAATTCAAGTTCAGATTTGAATTCAGGAAAGAATGACTCTAGTGGAAATGTGGAAAAATTGGTTGATGAAGTTGGCAGGAAGATGAGAGTAGAGAGTGACACCGAGTTTGAGAAAGTGAAAGTTAATTCTTTCGAATTTCATACTGAAGAGCGTTGGAGCTCAGACAAGGTTCATGATGAGGGCATTTTTGTATTTGGAAGCAGCGGTAAGAAAGGTTCCAGTTTGACGGATTCCAAGGTAGCTAATTGTCAAGATGAGGTGAAATCAAGTGATGAAGGAGATTGCAAGTCCAATTCAAACAGTCGGAATGATAATCTGAGTTCTGATTTCAGTAGCAAGTGTAATCTTGTATCTGAAACTAGTGAGGTAACTTGTGGAGATAATCATAAAAGTACTGACCATGTTGTATTTGGAAGCGAAAGTAACAAGGCTGGTACCACCAGTGGGATTTCTAGTTCCACTGAGTTTACATTTCAGGCAGGACTTGGTGATAGTGTTGATGCAGGCCAGTTTCCTGAGTGTCAAATTAATAAACCCAATGCAGCTGCTGGCCCATGTTCATTCTCATCAATTGGTCTTGGCATCCAACTAAATGGTTGTGTTTCTGAAGCAGCTTCTGCGGGTGGAGTAAAAGGTAAAGATGAAAGTAGCTTTACTACCTCTCCAGATGGATTTGGAGTGTGCTTTGAGGACTTCAACACTCCATTGCGGTTTCCTGCTTGCCTCAAAGAAAATCTATTTCCTGAAATAAATAAATCAAACATCAGTATGAAGGGTAGATCGGTTAGGGACAAGGGATCAAGGAAAACAAGGGGAAGGTTGAAGAAACCTTCTCTGAGTAAGCAATGGCCATTGCAAGATAATGTTCCCAAGGAAAGTAGTTCCCAAGAAAACCCAGTCTCACCTGGATGTGGCTCACCCATGGATTTCTCTCCATATGAGGAAACTACAGTTGCTGATCCACATTCGAGGGAATCTTCTACAATGTCTAATGACACCTTCCACCTAGTCGGTAATACTGCACCTTGTGGCTCCGATGCAACAGTTCCCATTGGACGTAATGGTGATGAGGGAGAATTTGCCGCTAACGTTGATCAGATATATGGTAAGGCCACTGACGAGAATTCTAGGTATCATGGTGAAAGAATATTTGTTGACAATTGTTCTTCCAAAGGGTCTGGTTCTGGAGCTGAAACTCCCTGCTTTAGCTCCAATGGTATCAGTCATGCTGGTAAGGATTCAGAAGACGTTAGAGCTGATAATGGTGTGAATGTAGAAAGTCAAGAACAGGATTGTGGAACACCGTGTTTTGCTTCTGGTTTGAAATATATGGAGAGGAAAACATTTACCTTTGTTGCATCATCTTCTGCAGAAGGAAGTCCAATAGTGGCAAGGCGTCTTCCGCGCAGAGTGAAAAATAAGAAGAAAGTTGGTTCTAAAACGTTTGTTATAACTCCAATTCCAAATGTTCAGTTTGGAGGTTCTGACCAATTTACACCCCACTCTAGCACACCATTGTCTTTTGATGCGGTAGGAAAATCTGAGCCCCATGAACAAGTAACGAAAGTGCATATCCCTTCTACTGAGGCTACTCATGAGACTTGTGAGAAGTGGCGTATTAGGGGCAACAAAGCTTATAGGAACAAAGACTTTTCAAAAGCTGAAGACTTTTACACACAGGGAATAGTTTCTGTACCTTCAAGTGAAAGATCAGGAAGCTGCCTTAGGCCTCTTGTACTATGCTATAGCAATCGTGCAGCAACAAGGATGTATATGGGAAGGATAAGGGAAGCTTTAGGGGACTGCATGATGGCCACTGCACTAGACCCCAACTTTCTCAAAGTTCAAATGAGAGCTGCAAATTTCCATCTTCTTCTTGGCGAAGTTGAAAATGCCCAACGGTACTTTAATAATTGCTTGGAATCCAGAACTGGTGTGTGTTTGGATCGGAGAATTGTAATTGATTCTGCTGATGGCATACAAAAGGCTCAGAAAGTGGCTGAGGATACGAATCGCTCTGCCAAGCTTCTGGAACAGAGAACTGCAGATGCAGCTCTCAGTGCCTTGGAAATTGTTTCTGAGGCCTTATCTATTAGTGAATACTCGGAAAAGTTACTTGAAATGAAGGCAGAGGCTTTGTGTTTGTTGAGGAGATATGAAGAGGCAATTCAACTGTGTGAACAGAGTATGTATTTTGCTGAGAAGAACTTTTCTTCGCTGAACAGTGTAGTAAATATGGATGCTGCTGGATGTGAAGATCATCCATATGCTAGGTTGTGGAGGTGGTTCTTCATATCCAAATGTTACTTTCATTTGGGAAGGTTTCAGGCAGCACTTGATTTACTTGAGAAGCTAGAGCAAGTGGGATCTATCAAAGACAGGTATGCGAGTAAGAATCTGGAATCATCAATTTCATTAGCTGCCACCATACGTGAACTGTTAAGCCACAAGGATGCAGGGAATGAAGCATTTAGATCAGGAAGATATACAGAAGCAGTGGAGCATTATACTGTTGCTTTATCTCGCAATATTGGATCTCGGCCATTTTCTGCAATCTGTTTGTGCAACCGTGCTGCAGCACACCAAGCTTTGGGTCAAATTACTGATGCCATTGCTGACTGCAGTCTTGCAATAGCTCTTGATGGACATTATGTTAAGGCAGTTTCTAGAAGAGCTACCTTACATGAGATGATACGGGACTATGGACAGGCTGCTAGCGATCTCCAAAGACTTATTTCTGTACTGGAAAACCAATCTGGTGACAAGGCCAAAGAACCTACCTCACAAGGTAGCTCCAATGGCCGTACACAAGAATTACGGAACTCTTATCGACGTATGCCTTTAATGGAACAAGAAGCTAAGAAAGGAATCCCCTTGAATTTTTACCTCATTCTGGGAATTAAATCATCTGACACAAGTTCTGACATTAAGAAGGCATACCGTAAGGCTGCTCTCAAGCATCATCCCGACAAGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ TPR_8

Protein Analysis

1223

Amino Acids

132.54

Weight (kDa)

5.93

Isoelectric Point (pI)

44.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 1191 - 1222 6.7e-09 DnaJ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2144
AatII GACGTC 1 cut(s) 24
Acc65I GGTACC 1 cut(s) 1127
AccB1I GGYRCC 1 cut(s) 1127
AccB7I CCANNNNNTGG 1 cut(s) 3283
AccBSI CCGCTC 1 cut(s) 367
AccII CGCG 2 cut(s) 175, 2098
AclI AACGTT 2 cut(s) 1782, 2135
AclWI GGATC 6 cut(s) 431, 1498, 1646, 2646, 3067, 3235
AcoI YGGCCR 6 cut(s) 170, 176, 1541, 2505, 3233, 3493
AcsI RAATTY 7 cut(s) 535, 712, 827, 1769, 1816, 2554, 3571
AcuI CTGAAG 3 cut(s) 858, 1320, 2376
AcyI GRCGYC 4 cut(s) 5, 21, 89, 2089
AdeI CACNNNGTG 1 cut(s) 1721
AfaI GTAC 7 cut(s) 1087, 1129, 2388, 2430, 2597, 3435, 3499
AfiI CCNNNNNNNGG 5 cut(s) 320, 1137, 1604, 3283, 3586
AhdI GACNNNNNGTC 2 cut(s) 25, 136
AhlI ACTAGT 2 cut(s) 287, 1052
AjnI CCWGG 1 cut(s) 1597
AloI GAACNNNNNNTCC 2 cut(s) 1132, 1164
Alw21I GWGCWC 1 cut(s) 854
Alw26I GTCTC 5 cut(s) 80, 227, 571, 1597, 2285
AlwI GGATC 6 cut(s) 431, 1498, 1646, 2646, 3067, 3235
AlwNI CAGNNNCTG 3 cut(s) 1241, 1310, 1649
ApoI RAATTY 7 cut(s) 535, 712, 827, 1769, 1816, 2554, 3571
ArsI GACNNNNNNTTYG 6 cut(s) 140, 172, 206, 238, 782, 814
AseI ATTAAT 1 cut(s) 1221
Asp700I GAANNNNTTC 1 cut(s) 2380
Asp718I GGTACC 1 cut(s) 1127
AspLEI GCGC 1 cut(s) 2100
AspS9I GGNCC 5 cut(s) 27, 134, 242, 446, 1244
AsuC2I CCSGG 1 cut(s) 444
AsuII TTCGAA 1 cut(s) 825
AsuNHI GCTAGC 1 cut(s) 3407
AvaII GGWCC 2 cut(s) 27, 134
AxyI CCTNAGG 1 cut(s) 2417
BalI TGGCCA 2 cut(s) 1543, 2507
BanI GGYRCC 1 cut(s) 1127
BanII GRGCYC 3 cut(s) 373, 854, 2241
BbsI GAAGAC 3 cut(s) 1944, 2084, 2364
Bbv12I GWGCWC 1 cut(s) 854
BbvCI CCTCAGC 1 cut(s) 2694
BccI CCATC 6 cut(s) 383, 1355, 2497, 2568, 2660, 3329
BceAI ACGGC 3 cut(s) 139, 252, 3480
BciT130I CCWGG 1 cut(s) 1599
BciVI GTATCC 1 cut(s) 2692
BclI TGATCA 3 cut(s) 484, 514, 1786
BcnI CCSGG 1 cut(s) 444
BcoDI GTCTC 5 cut(s) 80, 227, 571, 1597, 2285
BcuI ACTAGT 2 cut(s) 287, 1052
BfmI CTRYAG 6 cut(s) 1641, 2061, 2437, 2736, 3267, 3313
BfuI GTATCC 1 cut(s) 2692
BlpI GCTNAGC 1 cut(s) 426
BmcAI AGTACT 1 cut(s) 1087
Bme1390I CCNGG 2 cut(s) 444, 1599
Bme18I GGWCC 2 cut(s) 27, 134
BmeRI GACNNNNNGTC 2 cut(s) 25, 136
BmgT120I GGNCC 5 cut(s) 27, 134, 242, 446, 1244
BmiI GGNNCC 7 cut(s) 29, 127, 447, 682, 910, 1129, 1726
BmrFI CCNGG 2 cut(s) 444, 1599
BmrI ACTGGG 1 cut(s) 1583
BmtI GCTAGC 1 cut(s) 3411
BmuI ACTGGG 1 cut(s) 1583
BoxI GACNNNNGTC 1 cut(s) 3315
BpiI GAAGAC 3 cut(s) 1944, 2084, 2364
BpmI CTGGAG 2 cut(s) 1341, 1899
Bpu10I CCTNAGC 2 cut(s) 372, 2694
Bpu1102I GCTNAGC 1 cut(s) 426
Bpu14I TTCGAA 1 cut(s) 825
BpuEI CTTGAG 2 cut(s) 3059, 3632
BpuMI CCSGG 1 cut(s) 444
BsaAI YACGTR 1 cut(s) 3125
BsaBI GATNNNNATC 1 cut(s) 2703
BsaHI GRCGYC 4 cut(s) 5, 21, 89, 2089
BsaJI CCNNGG 7 cut(s) 173, 179, 443, 927, 1563, 1614, 2757
BsaWI WCCGGW 2 cut(s) 24, 683
BsaXI ACNNNNNCTCC 4 cut(s) 460, 490, 1339, 1369
Bsc4I CCNNNNNNNGG 5 cut(s) 320, 1137, 1604, 3283, 3586
Bse118I RCCGGY 1 cut(s) 7
Bse1I ACTGG 6 cut(s) 912, 1134, 1201, 1589, 2629, 3441
Bse21I CCTNAGG 1 cut(s) 2417
Bse3DI GCAATG 4 cut(s) 1397, 1544, 1544, 3303
Bse8I GATNNNNATC 1 cut(s) 2703
BseBI CCWGG 1 cut(s) 1599
BseDI CCNNGG 7 cut(s) 173, 179, 443, 927, 1563, 1614, 2757
BseJI GATNNNNATC 1 cut(s) 2703
BseLI CCNNNNNNNGG 5 cut(s) 320, 1137, 1604, 3283, 3586
BseMI GCAATG 4 cut(s) 1397, 1544, 1544, 3303
BseNI ACTGG 6 cut(s) 912, 1134, 1201, 1589, 2629, 3441
BseRI GAGGAG 3 cut(s) 98, 481, 2857
BseX3I CGGCCG 2 cut(s) 170, 176
BseYI CCCAGC 1 cut(s) 239
BsgI GTGCAG 3 cut(s) 1698, 2469, 2496
Bsh1236I CGCG 2 cut(s) 175, 2098
Bsh1285I CGRYCG 2 cut(s) 173, 179
BshNI GGYRCC 1 cut(s) 1127
BsiEI CGRYCG 2 cut(s) 173, 179
BsiHKAI GWGCWC 1 cut(s) 854
BsiSI CCGG 6 cut(s) 8, 25, 51, 245, 443, 684
BslFI GGGAC 4 cut(s) 13, 1496, 2507, 3404
BslI CCNNNNNNNGG 5 cut(s) 320, 1137, 1604, 3283, 3586
BsmAI GTCTC 5 cut(s) 80, 227, 571, 1597, 2285
BsmBI CGTCTC 2 cut(s) 80, 227
BsmFI GGGAC 4 cut(s) 13, 1496, 2507, 3404
BsmI GAATGC 1 cut(s) 220
Bsp119I TTCGAA 1 cut(s) 825
Bsp1286I GDGCHC 3 cut(s) 373, 854, 2241
Bsp1720I GCTNAGC 1 cut(s) 426
Bsp19I CCATGG 1 cut(s) 1614
BspFNI CGCG 2 cut(s) 175, 2098
BspHI TCATGA 2 cut(s) 865, 2287
BspLI GGNNCC 7 cut(s) 29, 127, 447, 682, 910, 1129, 1726
BspMAI CTGCAG 4 cut(s) 2065, 2740, 3271, 3317
BspOI GCTAGC 1 cut(s) 3411
BspPI GGATC 6 cut(s) 431, 1498, 1646, 2646, 3067, 3235
BspQI GCTCTTC 2 cut(s) 834, 3358
BspT104I TTCGAA 1 cut(s) 825
BspT107I GGYRCC 1 cut(s) 1127
BsrBI CCGCTC 1 cut(s) 367
BsrDI GCAATG 4 cut(s) 1397, 1544, 1544, 3303
BsrFI RCCGGY 1 cut(s) 7
BsrI ACTGG 6 cut(s) 912, 1134, 1201, 1589, 2629, 3441
BssAI RCCGGY 1 cut(s) 7
BssECI CCNNGG 7 cut(s) 173, 179, 443, 927, 1563, 1614, 2757
BssNI GRCGYC 4 cut(s) 5, 21, 89, 2089
BssT1I CCWWGG 4 cut(s) 927, 1563, 1614, 2757
Bst2UI CCWGG 1 cut(s) 1599
Bst6I CTCTTC 3 cut(s) 834, 2847, 3358
BstACI GRCGYC 4 cut(s) 5, 21, 89, 2089
BstAPI GCANNNNNTGC 1 cut(s) 1310
BstBAI YACGTR 1 cut(s) 3125
BstBI TTCGAA 1 cut(s) 825
BstC8I GCNNGC 7 cut(s) 9, 210, 369, 1198, 1243, 1414, 3409
BstDSI CCRYGG 2 cut(s) 173, 1614
BstFNI CGCG 2 cut(s) 175, 2098
BstHHI GCGC 1 cut(s) 2100
BstMAI GTCTC 5 cut(s) 80, 227, 571, 1597, 2285
BstMCI CGRYCG 2 cut(s) 173, 179
BstMWI GCNNNNNNNGC 6 cut(s) 1310, 2095, 2744, 2753, 3278, 3492
BstNI CCWGG 1 cut(s) 1599
BstNSI RCATGY 1 cut(s) 212
BstPAI GACNNNNGTC 1 cut(s) 3315
BstSCI CCNGG 2 cut(s) 442, 1597
BstSFI CTRYAG 6 cut(s) 1641, 2061, 2437, 2736, 3267, 3313
BstUI CGCG 2 cut(s) 175, 2098
BstV2I GAAGAC 3 cut(s) 1944, 2084, 2364
BstX2I RGATCY 2 cut(s) 3059, 3227
BstXI CCANNNNNNTGG 2 cut(s) 1286, 2722
BstYI RGATCY 2 cut(s) 3059, 3227
BstZI CGGCCG 2 cut(s) 170, 176
Bsu36I CCTNAGG 1 cut(s) 2417
BsuI GTATCC 1 cut(s) 2692
BtgI CCRYGG 2 cut(s) 173, 1614
BtsI GCAGTG 2 cut(s) 2508, 3195
BtsIMutI CAGTG 8 cut(s) 480, 1141, 1152, 1806, 2508, 2758, 2923, 3195
Cac8I GCNNGC 7 cut(s) 9, 210, 369, 1198, 1243, 1414, 3409
CaiI CAGNNNCTG 3 cut(s) 1241, 1310, 1649
CciI TCATGA 2 cut(s) 865, 2287
CfoI GCGC 1 cut(s) 2100
Cfr10I RCCGGY 1 cut(s) 7
Cfr13I GGNCC 5 cut(s) 27, 134, 242, 446, 1244
Cfr42I CCGCGG 1 cut(s) 176
CpoI CGGWCCG 1 cut(s) 134
CseI GACGC 3 cut(s) 13, 97, 2078
Csp6I GTAC 7 cut(s) 1086, 1128, 2387, 2429, 2596, 3434, 3498
CspI CGGWCCG 1 cut(s) 134
CviQI GTAC 7 cut(s) 1086, 1128, 2387, 2429, 2596, 3434, 3498
DraIII CACNNNGTG 1 cut(s) 1721
DriI GACNNNNNGTC 2 cut(s) 25, 136
EaeI YGGCCR 6 cut(s) 170, 176, 1541, 2505, 3233, 3493
EagI CGGCCG 2 cut(s) 170, 176
Eam1104I CTCTTC 3 cut(s) 834, 2847, 3358
Eam1105I GACNNNNNGTC 2 cut(s) 25, 136
EarI CTCTTC 3 cut(s) 834, 2847, 3358
EciI GGCGGA 1 cut(s) 32
Ecl136II GAGCTC 1 cut(s) 852
EclXI CGGCCG 2 cut(s) 170, 176
Eco130I CCWWGG 4 cut(s) 927, 1563, 1614, 2757
Eco147I AGGCCT 2 cut(s) 2422, 2777
Eco24I GRGCYC 3 cut(s) 373, 854, 2241
Eco47I GGWCC 2 cut(s) 27, 134
Eco52I CGGCCG 2 cut(s) 170, 176
Eco53kI GAGCTC 1 cut(s) 852
Eco57I CTGAAG 3 cut(s) 858, 1320, 2376
Eco81I CCTNAGG 1 cut(s) 2417
EcoICRI GAGCTC 1 cut(s) 852
EcoRI GAATTC 2 cut(s) 712, 1816
EcoRII CCWGG 1 cut(s) 1597
EcoT14I CCWWGG 4 cut(s) 927, 1563, 1614, 2757
EcoT38I GRGCYC 3 cut(s) 373, 854, 2241
ErhI CCWWGG 4 cut(s) 927, 1563, 1614, 2757
Esp3I CGTCTC 2 cut(s) 80, 227
FalI AAGNNNNNCTT 2 cut(s) 2470, 2502
FaqI GGGAC 4 cut(s) 13, 1496, 2507, 3404
FauI CCCGC 3 cut(s) 211, 360, 1306
FauNDI CATATG 2 cut(s) 1630, 2959
FbaI TGATCA 3 cut(s) 484, 514, 1786
FriOI GRGCYC 3 cut(s) 373, 854, 2241
GlaI GCGC 1 cut(s) 2099
GsaI CCCAGC 1 cut(s) 243
GsuI CTGGAG 2 cut(s) 1341, 1899
HapII CCGG 6 cut(s) 8, 25, 51, 245, 443, 684
HgaI GACGC 3 cut(s) 13, 97, 2078
HhaI GCGC 1 cut(s) 2100
Hin1I GRCGYC 4 cut(s) 5, 21, 89, 2089
Hin6I GCGC 1 cut(s) 2098
HinP1I GCGC 1 cut(s) 2098
HincII GTYRAC 2 cut(s) 253, 1849
HindII GTYRAC 2 cut(s) 253, 1849
HindIII AAGCTT 4 cut(s) 2325, 2484, 2717, 3279
HpaII CCGG 6 cut(s) 8, 25, 51, 245, 443, 684
Hpy166II GTNNAC 7 cut(s) 253, 379, 1161, 1849, 2873, 3128, 3500
Hpy8I GTNNAC 7 cut(s) 253, 379, 1161, 1849, 2873, 3128, 3500
Hpy99I CGWCG 3 cut(s) 134, 142, 3528
HpyCH4IV ACGT 8 cut(s) 21, 490, 1750, 1782, 1941, 2135, 3124, 3526
HpyF10VI GCNNNNNNNGC 6 cut(s) 1310, 2095, 2744, 2753, 3278, 3492
HpySE526I ACGT 8 cut(s) 21, 490, 1750, 1782, 1941, 2135, 3124, 3526
Hsp92I GRCGYC 4 cut(s) 5, 21, 89, 2089
HspAI GCGC 1 cut(s) 2098
KpnI GGTACC 1 cut(s) 1131
KroI GCCGGC 1 cut(s) 7
KroNI GCCGGC 1 cut(s) 9
Ksp22I TGATCA 3 cut(s) 484, 514, 1786
KspI CCGCGG 1 cut(s) 176
LguI GCTCTTC 2 cut(s) 834, 3358
LmnI GCTCC 7 cut(s) 535, 849, 1730, 1880, 1907, 3193, 3491
MaeII ACGT 8 cut(s) 21, 490, 1750, 1782, 1941, 2135, 3124, 3526
MaeIII GTNAC 9 cut(s) 156, 476, 788, 1060, 1115, 2251, 2805, 2996, 3452
MbiI CCGCTC 1 cut(s) 367
MfeI CAATTG 2 cut(s) 1263, 1852
MflI RGATCY 2 cut(s) 3059, 3227
MhlI GDGCHC 3 cut(s) 373, 854, 2241
MlsI TGGCCA 2 cut(s) 1543, 2507
MluNI TGGCCA 2 cut(s) 1543, 2507
MlyI GAGTC 3 cut(s) 573, 647, 722
MmeI TCCRAC 4 cut(s) 153, 827, 977, 1303
Mox20I TGGCCA 2 cut(s) 1543, 2507
MreI CGCCGGCG 1 cut(s) 7
MroNI GCCGGC 1 cut(s) 7
MroXI GAANNNNTTC 1 cut(s) 2380
MscI TGGCCA 2 cut(s) 1543, 2507
MslI CAYNNNNRTG 5 cut(s) 213, 1460, 1600, 2958, 3144
Msp20I TGGCCA 2 cut(s) 1543, 2507
MspA1I CMGCKG 3 cut(s) 175, 897, 1238
MspI CCGG 6 cut(s) 8, 25, 51, 245, 443, 684
MspR9I CCNGG 2 cut(s) 444, 1599
MunI CAATTG 2 cut(s) 1263, 1852
Mva1269I GAATGC 1 cut(s) 220
MvaI CCWGG 1 cut(s) 1599
MvnI CGCG 2 cut(s) 175, 2098
MwoI GCNNNNNNNGC 6 cut(s) 1310, 2095, 2744, 2753, 3278, 3492
NaeI GCCGGC 1 cut(s) 9
NciI CCSGG 1 cut(s) 444
NcoI CCATGG 1 cut(s) 1614
NdeI CATATG 2 cut(s) 1630, 2959
NgoMIV GCCGGC 1 cut(s) 7
NheI GCTAGC 1 cut(s) 3407
NlaIV GGNNCC 7 cut(s) 29, 127, 447, 682, 910, 1129, 1726
NmeAIII GCCGAG 4 cut(s) 148, 204, 474, 3211
NmuCI GTSAC 4 cut(s) 156, 476, 788, 3452
NspI RCATGY 1 cut(s) 212
NspV TTCGAA 1 cut(s) 825
PaeI GCATGC 1 cut(s) 212
PagI TCATGA 2 cut(s) 865, 2287
PceI AGGCCT 2 cut(s) 2422, 2777
PciSI GCTCTTC 2 cut(s) 834, 3358
PctI GAATGC 1 cut(s) 220
PdiI GCCGGC 1 cut(s) 9
PdmI GAANNNNTTC 1 cut(s) 2380
PflMI CCANNNNNTGG 1 cut(s) 3283
PleI GAGTC 3 cut(s) 573, 647, 722
PpsI GAGTC 3 cut(s) 573, 647, 722
Ppu21I YACGTR 1 cut(s) 3125
PshAI GACNNNNGTC 1 cut(s) 3315
PshBI ATTAAT 1 cut(s) 1221
PsiI TTATAA 1 cut(s) 2144
Psp124BI GAGCTC 1 cut(s) 854
Psp1406I AACGTT 2 cut(s) 1782, 2135
Psp6I CCWGG 1 cut(s) 1597
PspFI CCCAGC 1 cut(s) 239
PspGI CCWGG 1 cut(s) 1597
PspN4I GGNNCC 7 cut(s) 29, 127, 447, 682, 910, 1129, 1726
PspPI GGNCC 5 cut(s) 27, 134, 242, 446, 1244
PsrI GAACNNNNNNTAC 2 cut(s) 892, 924
PstI CTGCAG 4 cut(s) 2065, 2740, 3271, 3317
PstNI CAGNNNCTG 3 cut(s) 1241, 1310, 1649
PsuI RGATCY 2 cut(s) 3059, 3227
PvuII CAGCTG 1 cut(s) 1238
RsaI GTAC 7 cut(s) 1087, 1129, 2388, 2430, 2597, 3435, 3499
RsaNI GTAC 7 cut(s) 1086, 1128, 2387, 2429, 2596, 3434, 3498
RseI CAYNNNNRTG 5 cut(s) 213, 1460, 1600, 2958, 3144
Rsr2I CGGWCCG 1 cut(s) 134
RsrII CGGWCCG 1 cut(s) 134
SacI GAGCTC 1 cut(s) 854
SacII CCGCGG 1 cut(s) 176
SapI GCTCTTC 2 cut(s) 834, 3358
Sau96I GGNCC 5 cut(s) 27, 134, 242, 446, 1244
ScaI AGTACT 1 cut(s) 1087
SchI GAGTC 3 cut(s) 573, 647, 722
ScrFI CCNGG 2 cut(s) 444, 1599
SduI GDGCHC 3 cut(s) 373, 854, 2241
SfcI CTRYAG 6 cut(s) 1641, 2061, 2437, 2736, 3267, 3313
Sfr303I CCGCGG 1 cut(s) 176
SfuI TTCGAA 1 cut(s) 825
SgrAI CRCCGGYG 1 cut(s) 7
SgrBI CCGCGG 1 cut(s) 176
SinI GGWCC 2 cut(s) 27, 134
SmiMI CAYNNNNRTG 5 cut(s) 213, 1460, 1600, 2958, 3144
SmlI CTYRAG 2 cut(s) 3038, 3647
SmoI CTYRAG 2 cut(s) 3038, 3647
SpeI ACTAGT 2 cut(s) 287, 1052
SphI GCATGC 1 cut(s) 212
SseBI AGGCCT 2 cut(s) 2422, 2777
SspI AATATT 3 cut(s) 623, 1842, 3223
SstI GAGCTC 1 cut(s) 854
StuI AGGCCT 2 cut(s) 2422, 2777
StyD4I CCNGG 2 cut(s) 442, 1597
StyI CCWWGG 4 cut(s) 927, 1563, 1614, 2757
TaiI ACGT 8 cut(s) 24, 493, 1753, 1785, 1944, 2138, 3127, 3529
TaqI TCGA 5 cut(s) 224, 507, 825, 1661, 3523
TatI WGTACW 3 cut(s) 1085, 2428, 3433
TauI GCSGC 6 cut(s) 14, 17, 175, 178, 344, 1778
TscAI CASTG 8 cut(s) 487, 1141, 1159, 1813, 2515, 2758, 2923, 3195
TseFI GTSAC 4 cut(s) 156, 476, 788, 3452
Tsp45I GTSAC 4 cut(s) 156, 476, 788, 3452
TspGWI ACGGA 4 cut(s) 126, 628, 935, 3526
TspRI CASTG 8 cut(s) 487, 1141, 1159, 1813, 2515, 2758, 2923, 3195
Van91I CCANNNNNTGG 1 cut(s) 3283
VpaK11BI GGWCC 2 cut(s) 27, 134
VspI ATTAAT 1 cut(s) 1221
XapI RAATTY 7 cut(s) 535, 712, 827, 1769, 1816, 2554, 3571
XbaI TCTAGA 1 cut(s) 3359
XceI RCATGY 1 cut(s) 212
XcmI CCANNNNNNNNNTGG 2 cut(s) 1100, 2567
XmnI GAANNNNTTC 1 cut(s) 2380
ZraI GACGTC 1 cut(s) 22
ZrmI AGTACT 1 cut(s) 1087
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.