RH3BG294400

dnaJ homolog subfamily C member

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
OG0003093
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG294400.1

Sequence Viewer

Length: 4011 bp
ATGTCGCCGGCGGCGGCGGACGCCCGGTCCCCGATTACCTCTAAACCCTCCGGCAATCCTCAAAACCCTAAACCTTCATCGGAGGAGACGCCTTCCTCTAACCCCTTCAATTTCAATGCTGTTGGTTCCGACGGTCCGTCGGGTCCAAATGTGCCGTCACGATCAGCTCGGCCGCGGCCGAGGTTGGCGAAGCACAGGAGGAAGCAGCAGGCGAATGCGGGGTCGAGAACTGGGCCGGCTGAGACGGCTGGGCCGGAGGTCAACCCGTTTTGCTCGGTAAGTGGTGGTGGTGCTGCTGCTACTAGTGTTTGTAATCAGTTCAGTTTTCCGAGTGGTGGTGTGGGTTTTGTGTTTGGCGCTACATTGAGTGGTGTTGATGAGCGGGCTCAGGTGAATAGTGGGGATGGTAGAGAGTTCGGTGAGGTTGAGAGTGTGAGTGCTAAGCAGGATGATCCTCCGGGACCGAGTTCGTGTGGGGAGAGCAGAGAATGTGACACTGATCAGAGTGGAAAAGGGATATTCGAGTGTGATCAGAACCATTCAGCTCCGAATGCGGAATGTGTTGAGAAACTCGGTGGTTTTGGGTGTGCTTCAGAGGTAGGACAGAGTGAATATTGTGAAAATGAGGGGAAGTCAGGTAATGACTCTAGTGGTATTGGTTTTGTGTTTGGTTCCGGTTGGTTTAATTCAAGTTCAGATTTGAATTCAGGAAAGAATGGCTCTAGTGGAAATATGGAAAAATTGGTTGATGAAGTTGGCAGGAAGATGAGAGTAGAGAGTGACACCGAGTTTGAGAAAGTGAAAGTTAATTCTTTCAAATTTCATAGTGAGGAGCGCTGGAGCTCAGACAAGGTTCATGACGAGGGCATTTTTGTATTTGGAAGCAGCGGTAAGAAAGGTTCCAGTTTGACGGATTCCAAGGTAGCTAATTGTCAAGATGAGGTGAAATCAAGTGATGAAGGAGATTGCAAGTCCAATTCAAACAGTCGGAATGATAATCTGAGTTCTGATTTCAGTAGCAAGTGTAATCTTGTATCTGAAACTAGTGAGGTAACTTGTGGAGATAATCATAAAAGTACTGACCATGTTGTATTTGGAAGAGAAAGTAACACGGCTGGTACCACCAGTGGGATTTCTAGTTCCACTGAGTTTACATTTCAGGCAGGACTTGGTGATAGTGTTGATGCAGGCCAGTTTCCTGAGTGTCAAATTAATAAACCCAATGCAGCTGCTGGCCCATGTTCATTCTCATCAATTGGTCTTGGCATCCAACTAAATGGTTGTGTTTCTGAAGCAGCTTCTGCGGGTGGAGTAAAAGGAAAAGATGAAAGTAGCTTTACTAGCTCTCCAGATGGATTTGGAGTGTGCTTTGAGGACTTCAACACTCCATTGCGGTTTCCTGCTTGCCTCAAAGAAAATCTATTTCCTGAAATAAATAAATCAAACATCAGTATGAAGGGTAGATCGGTTAGGGACAAGAGATCAAGGAAAACAAGGGGAAAGTTGAAGAAACCTTCTCTGAGTAAGCAATGGCCAGCACAAGATAATGTTCCCAAGGAAAGTAGTTCCCAAGAAACCCCAGTCTCACCTGGATGTGGCTCACCCATGGATTTCTCTCCATATGAGGAAACTACAGTTGCTAATCCACATTCGAGGGAATCTTCTACAGTGTCTAATGACACCTTCCACCTAGTCAGTAATACTGCACCTTGTGGCTCCGATGCAACAGTTCCTATTGGACCTAATGGTGATGAGGGAGAATTTGCCGCTAAAGGTGATCAGATATATGGTAAGGCCACTGACGAGAATTCTAGGTATCATGGTGAAAGAATATTTGTTGACAATTGTTCCTCCAAAGGGTCTGGTTCTGGAGCTGAAACCCCCTGCTTTAGCTCCAATGGTATCAGTCATGCTGGTAAGGATTCAGAAGACGTTAGAGCTGATAATGGTGTGAATGTAGAAACTCAAGAACAGGATTGTGGAACACCGTGTTTTGCTTTTGGTTTTGAAAATATGGAGAGGAAAACATTTACCTTTGTCGCATCATCTTCTGCAGAAGGAAGTCCAATAGTGGCAAGGCGTCTTCTGCGCAGAGTGAAAAATAAGAAGAAAGTTGGTTCTAATACATTTGTTATAAATCCAAGTCCAAATGTTCAGTTTGGAGGTTCTGACCAATTTACACCCCACTCTAGCACACCATTGTCTTTTGATGTGGTAGGAAAATCTGAGCCCCATGAACAAGTAACGAAAGTGCATATCCCTTCTACTGAGGCTACTCATGAGACTTGTGAGAAGTGGCGAATTAGGGGCAACAAAGCTTATAGGAACAAAGACTTTTCAAAAGCTGAAGACTTTTACACCCAGGGAATAGTTTCTGTACCTTCAAGTGAAAGATCGGGAAGCTGCCTTAAGCCTCTTTTACTATGCTATAGCAATCGGGCAGCAACAAGGATGTATATGGGAAGGATAAGGGAAGCTTTAGGGGACTGCATGATGGCCACTGCACTAGACCCCAACTTTCTCAAAGTTCAAATGAGAGCTGCAAATTTCCATCTTCTTCTCGGCGAAGTTGAAAATGCCCAACGGTACTTTAATAATTGCTTGGAATCCGGAACTGGTGTGTGTTTGGATCGGAGAATTGTAATTGATTCTGCTGATGGCATACAAAAGGCTCAGAAAGTGGCTGAGTATACGAATCGCTCTGCCAAGCTTCTGGAACAGAGAACTACAGATGCAGCTCTCAGTGCCTTGGAAATTGTTTCTGAGGCCTTGTCTATTAGTGAATACTCGGAAAAGTTACTTGAAATGAAGGCAGAGGCTCTGTGTTTGTTGAGGAGATATGAAGAGGCAATTCAACTGTGTGAACAGAGTATGTATTTTGCTGAGAAGAACTTTTCTTCGCTGAACAGCGTAGTAAATATGGATACTGCTGGATGTGAAGATCATCCATATGCTAGGTTGTGGAGGTGGTTCTTCATATCCAAATCTCACTTTCATTTGGGAAGGTTTCAGGCAGCTCTTGATTTACTTGAGAAGCTAGAGCAAGTGGGATCTATCAAAGACAGGTATGCGAGTAAGAATCTGGAATCATCAATTTCATTAGCTGTCACCATACGTGAACTGTTAAGCCACAAGGATGCAGGGAATGAAGCATTTAGATCAGGAAGATATACAGAAGCAGTGGAGCATTATACTGTTGCTTTATCTCGCAATATTGGATCTCGGCCATTTTCTGCAATCTGTTTGTGCAACCGTGCTGCAGCACACCAAGCTTTGGGTCAAATTACTGATGCCATTGCTGACTGCAGTCTTGCAATAGCTCTTGATGGACATTATGTTAAGGCAGTTTCTAGAAGAGCTACCTTACATGAGATGATACGGGACTATGGACAGGCTGCTAGCGATCTCCAAAGACTTATTTCTGTACTGGAAAACCAATCTGGTGACAAGGCCAAAGAACCTACCTCACAAGGTAGCTCCAATGGCCGTACACAAGAATTACGGAACTCTTATCGACGTATGCCTTTAATGGAAGAAGAAGCTAAGAAAGGAATCCCCTTGAATTTTTACCTCATTCTGGGAATTAAATCATCTGACACAAGTTCTGACATTAAGAAGGCATACCGTAAGGCTGCTCTCAAGCATCATCCCGACAAGGCTGGTCAGTTCTTGGCAAGAAGTGAGAGTGGAGATGAAGGGCAACTCTGGAAAGAAATCTCTCTCGAGGTTCACAAGGATGCTGACAGACTCTTTAAAATGATCGGAGAGGCATATGCAGTACTTTCAGATCCCAACAAGCGCTCAGAATATGATCTTGAGGAAGACATAAGAAAATCAGCAAAGGAAAGCAAGGAACGTGGCGTCTACAGAAAGTCTTCAGATTTTCAGAGTCCTAGACGCAGCAGCTATAGAAAACCAGATTTTTATAGCTCTCCATTCGAGAGAAGTTCATATTGTCGGAACAGTAGGGAGGGTTGGAAGACATATGGAGATTCGTATTCACGATGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ TPR_8

Protein Analysis

1336

Amino Acids

145.41

Weight (kDa)

6.1

Isoelectric Point (pI)

46.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 1188 - 1220 1.8e-09 DnaJ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2135
Acc16I TGCGCA 1 cut(s) 2090
Acc65I GGTACC 1 cut(s) 1118
AccB1I GGYRCC 1 cut(s) 1118
AccB7I CCANNNNNTGG 1 cut(s) 3274
AccBSI CCGCTC 1 cut(s) 382
AccI GTMKAC 2 cut(s) 2690, 3864
AccII CGCG 1 cut(s) 175
AccIII TCCGGA 1 cut(s) 2609
AclWI GGATC 5 cut(s) 446, 2637, 3058, 3226, 3782
AcoI YGGCCR 6 cut(s) 170, 176, 1532, 2496, 3224, 3484
AcsI RAATTY 6 cut(s) 703, 818, 1760, 1807, 2545, 3562
AcuI CTGAAG 4 cut(s) 576, 1311, 2367, 3861
AcyI GRCGYC 4 cut(s) 21, 89, 2080, 3861
AdeI CACNNNGTG 1 cut(s) 1712
AfaI GTAC 7 cut(s) 1078, 1120, 2379, 2588, 3426, 3490, 3780
AfeI AGCGCT 2 cut(s) 836, 3800
AfiI CCNNNNNNNGG 6 cut(s) 335, 1128, 1595, 1857, 3274, 3577
AflII CTTAAG 1 cut(s) 2408
AhdI GACNNNNNGTC 2 cut(s) 25, 136
AhlI ACTAGT 2 cut(s) 302, 1043
AjnI CCWGG 2 cut(s) 1588, 2361
AloI GAACNNNNNNTCC 2 cut(s) 1123, 1155
Alw21I GWGCWC 1 cut(s) 845
Alw26I GTCTC 4 cut(s) 80, 236, 1588, 2276
AlwI GGATC 5 cut(s) 446, 2637, 3058, 3226, 3782
AlwNI CAGNNNCTG 2 cut(s) 1232, 1301
Ama87I CYCGRG 1 cut(s) 3722
Aor13HI TCCGGA 1 cut(s) 2609
Aor51HI AGCGCT 2 cut(s) 836, 3800
ApoI RAATTY 6 cut(s) 703, 818, 1760, 1807, 2545, 3562
ArsI GACNNNNNNTTYG 6 cut(s) 140, 172, 206, 238, 773, 805
AseI ATTAAT 1 cut(s) 1212
Asp700I GAANNNNTTC 2 cut(s) 2371, 3874
Asp718I GGTACC 1 cut(s) 1118
AspLEI GCGC 4 cut(s) 359, 837, 2091, 3801
AspS9I GGNCC 8 cut(s) 27, 134, 143, 233, 251, 461, 1235, 1739
AsuC2I CCSGG 2 cut(s) 25, 459
AsuNHI GCTAGC 1 cut(s) 3398
AvaI CYCGRG 1 cut(s) 3722
AvaII GGWCC 5 cut(s) 27, 134, 143, 461, 1739
BalI TGGCCA 2 cut(s) 1534, 2498
BanI GGYRCC 1 cut(s) 1118
BanII GRGCYC 3 cut(s) 388, 845, 2232
BbsI GAAGAC 6 cut(s) 1935, 2075, 2355, 3828, 3867, 3986
Bbv12I GWGCWC 1 cut(s) 845
BccI CCATC 7 cut(s) 398, 1346, 2488, 2559, 2651, 3320, 3999
BceAI ACGGC 4 cut(s) 139, 261, 1128, 3471
BciT130I CCWGG 2 cut(s) 1590, 2363
BciVI GTATCC 1 cut(s) 2917
BclI TGATCA 3 cut(s) 499, 529, 1777
BcnI CCSGG 2 cut(s) 25, 459
BcoDI GTCTC 4 cut(s) 80, 236, 1588, 2276
BcuI ACTAGT 2 cut(s) 302, 1043
BfmI CTRYAG 9 cut(s) 1632, 1665, 2052, 2428, 2727, 3258, 3304, 3865, 3907
BfoI RGCGCY 3 cut(s) 360, 838, 3802
BfrI CTTAAG 1 cut(s) 2408
BfuI GTATCC 1 cut(s) 2917
BlpI GCTNAGC 1 cut(s) 441
BmcAI AGTACT 2 cut(s) 1078, 3780
Bme1390I CCNGG 4 cut(s) 25, 459, 1590, 2363
Bme18I GGWCC 5 cut(s) 27, 134, 143, 461, 1739
BmeRI GACNNNNNGTC 2 cut(s) 25, 136
BmeT110I CYCGRG 1 cut(s) 3722
BmgT120I GGNCC 8 cut(s) 27, 134, 143, 233, 251, 461, 1235, 1739
BmiI GGNNCC 8 cut(s) 29, 127, 144, 462, 673, 901, 1120, 1717
BmrFI CCNGG 4 cut(s) 25, 459, 1590, 2363
BmrI ACTGGG 2 cut(s) 240, 1574
BmsI GCATC 9 cut(s) 1174, 1275, 1711, 2051, 2722, 3127, 3280, 3652, 3727
BmtI GCTAGC 1 cut(s) 3402
BmuI ACTGGG 2 cut(s) 240, 1574
BoxI GACNNNNGTC 1 cut(s) 3306
BpiI GAAGAC 6 cut(s) 1935, 2075, 2355, 3828, 3867, 3986
BpmI CTGGAG 3 cut(s) 859, 1332, 1890
Bpu10I CCTNAGC 1 cut(s) 387
Bpu1102I GCTNAGC 1 cut(s) 441
BpuEI CTTGAG 4 cut(s) 1950, 3050, 3623, 3836
BpuMI CCSGG 2 cut(s) 25, 459
BsaAI YACGTR 1 cut(s) 3116
BsaHI GRCGYC 4 cut(s) 21, 89, 2080, 3861
BsaJI CCNNGG 8 cut(s) 173, 179, 918, 1554, 1605, 2361, 2362, 2748
BsaWI WCCGGW 2 cut(s) 674, 2609
BsaXI ACNNNNNCTCC 2 cut(s) 1330, 1360
Bsc4I CCNNNNNNNGG 6 cut(s) 335, 1128, 1595, 1857, 3274, 3577
Bse118I RCCGGY 2 cut(s) 7, 235
Bse1I ACTGG 7 cut(s) 235, 903, 1125, 1192, 1580, 2620, 3432
Bse3DI GCAATG 3 cut(s) 1388, 1535, 3294
BseAI TCCGGA 1 cut(s) 2609
BseBI CCWGG 2 cut(s) 1590, 2363
BseDI CCNNGG 8 cut(s) 173, 179, 918, 1554, 1605, 2361, 2362, 2748
BseLI CCNNNNNNNGG 6 cut(s) 335, 1128, 1595, 1857, 3274, 3577
BseMI GCAATG 3 cut(s) 1388, 1535, 3294
BseNI ACTGG 7 cut(s) 235, 903, 1125, 1192, 1580, 2620, 3432
BseRI GAGGAG 3 cut(s) 98, 845, 2848
BseX3I CGGCCG 2 cut(s) 170, 176
BseYI CCCAGC 1 cut(s) 248
BsgI GTGCAG 2 cut(s) 1689, 2487
Bsh1236I CGCG 1 cut(s) 175
Bsh1285I CGRYCG 2 cut(s) 173, 179
BshNI GGYRCC 1 cut(s) 1118
BsiEI CGRYCG 2 cut(s) 173, 179
BsiHKAI GWGCWC 1 cut(s) 845
BsiHKCI CYCGRG 1 cut(s) 3722
BsiSI CCGG 8 cut(s) 8, 25, 51, 236, 254, 458, 675, 2610
BslFI GGGAC 5 cut(s) 13, 474, 1487, 2498, 3395
BslI CCNNNNNNNGG 6 cut(s) 335, 1128, 1595, 1857, 3274, 3577
BsmAI GTCTC 4 cut(s) 80, 236, 1588, 2276
BsmBI CGTCTC 2 cut(s) 80, 236
BsmFI GGGAC 5 cut(s) 13, 474, 1487, 2498, 3395
BsmI GAATGC 2 cut(s) 220, 556
BsoBI CYCGRG 1 cut(s) 3722
Bsp1286I GDGCHC 3 cut(s) 388, 845, 2232
Bsp13I TCCGGA 1 cut(s) 2609
Bsp1720I GCTNAGC 1 cut(s) 441
Bsp19I CCATGG 1 cut(s) 1605
BspEI TCCGGA 1 cut(s) 2609
BspFNI CGCG 1 cut(s) 175
BspHI TCATGA 2 cut(s) 856, 2278
BspLI GGNNCC 8 cut(s) 29, 127, 144, 462, 673, 901, 1120, 1717
BspMAI CTGCAG 3 cut(s) 2056, 3262, 3308
BspOI GCTAGC 1 cut(s) 3402
BspPI GGATC 5 cut(s) 446, 2637, 3058, 3226, 3782
BspQI GCTCTTC 1 cut(s) 3349
BspT107I GGYRCC 1 cut(s) 1118
BspTI CTTAAG 1 cut(s) 2408
BsrBI CCGCTC 1 cut(s) 382
BsrDI GCAATG 3 cut(s) 1388, 1535, 3294
BsrFI RCCGGY 2 cut(s) 7, 235
BsrI ACTGG 7 cut(s) 235, 903, 1125, 1192, 1580, 2620, 3432
BssAI RCCGGY 2 cut(s) 7, 235
BssECI CCNNGG 8 cut(s) 173, 179, 918, 1554, 1605, 2361, 2362, 2748
BssNAI GTATAC 1 cut(s) 2691
BssNI GRCGYC 4 cut(s) 21, 89, 2080, 3861
BssT1I CCWWGG 4 cut(s) 918, 1554, 1605, 2748
Bst1107I GTATAC 1 cut(s) 2691
Bst2UI CCWGG 2 cut(s) 1590, 2363
Bst6I CTCTTC 3 cut(s) 1093, 2838, 3349
BstACI GRCGYC 4 cut(s) 21, 89, 2080, 3861
BstAFI CTTAAG 1 cut(s) 2408
BstAPI GCANNNNNTGC 1 cut(s) 1301
BstBAI YACGTR 1 cut(s) 3116
BstC8I GCNNGC 9 cut(s) 9, 210, 237, 384, 1189, 1234, 1405, 1536, 3400
BstDSI CCRYGG 2 cut(s) 173, 1605
BstFNI CGCG 1 cut(s) 175
BstH2I RGCGCY 3 cut(s) 360, 838, 3802
BstHHI GCGC 4 cut(s) 359, 837, 2091, 3801
BstMAI GTCTC 4 cut(s) 80, 236, 1588, 2276
BstMCI CGRYCG 2 cut(s) 173, 179
BstMWI GCNNNNNNNGC 9 cut(s) 20, 245, 551, 1301, 1341, 2086, 2744, 3269, 3483
BstNI CCWGG 2 cut(s) 1590, 2363
BstPAI GACNNNNGTC 1 cut(s) 3306
BstSCI CCNGG 4 cut(s) 23, 457, 1588, 2361
BstSFI CTRYAG 9 cut(s) 1632, 1665, 2052, 2428, 2727, 3258, 3304, 3865, 3907
BstUI CGCG 1 cut(s) 175
BstV2I GAAGAC 6 cut(s) 1935, 2075, 2355, 3828, 3867, 3986
BstX2I RGATCY 3 cut(s) 3050, 3218, 3787
BstXI CCANNNNNNTGG 2 cut(s) 1277, 2713
BstYI RGATCY 3 cut(s) 3050, 3218, 3787
BstZ17I GTATAC 1 cut(s) 2691
BstZI CGGCCG 2 cut(s) 170, 176
BsuI GTATCC 1 cut(s) 2917
BtgI CCRYGG 2 cut(s) 173, 1605
BtsI GCAGTG 2 cut(s) 2499, 3186
BtsIMutI CAGTG 8 cut(s) 495, 1132, 1143, 1674, 1797, 2499, 2749, 3186
Cac8I GCNNGC 9 cut(s) 9, 210, 237, 384, 1189, 1234, 1405, 1536, 3400
CaiI CAGNNNCTG 2 cut(s) 1232, 1301
CciI TCATGA 2 cut(s) 856, 2278
CfoI GCGC 4 cut(s) 359, 837, 2091, 3801
Cfr10I RCCGGY 2 cut(s) 7, 235
Cfr13I GGNCC 8 cut(s) 27, 134, 143, 233, 251, 461, 1235, 1739
Cfr42I CCGCGG 1 cut(s) 176
CpoI CGGWCCG 1 cut(s) 134
CseI GACGC 5 cut(s) 29, 97, 2069, 3850, 3906
Csp6I GTAC 7 cut(s) 1077, 1119, 2378, 2587, 3425, 3489, 3779
CspCI CAANNNNNGTGG 2 cut(s) 3838, 3873
CspI CGGWCCG 1 cut(s) 134
CviQI GTAC 7 cut(s) 1077, 1119, 2378, 2587, 3425, 3489, 3779
DraI TTTAAA 1 cut(s) 3754
DraIII CACNNNGTG 1 cut(s) 1712
DriI GACNNNNNGTC 2 cut(s) 25, 136
EaeI YGGCCR 6 cut(s) 170, 176, 1532, 2496, 3224, 3484
EagI CGGCCG 2 cut(s) 170, 176
Eam1104I CTCTTC 3 cut(s) 1093, 2838, 3349
Eam1105I GACNNNNNGTC 2 cut(s) 25, 136
EarI CTCTTC 3 cut(s) 1093, 2838, 3349
EciI GGCGGA 1 cut(s) 32
Ecl136II GAGCTC 1 cut(s) 843
EclXI CGGCCG 2 cut(s) 170, 176
Eco130I CCWWGG 4 cut(s) 918, 1554, 1605, 2748
Eco147I AGGCCT 1 cut(s) 2768
Eco24I GRGCYC 3 cut(s) 388, 845, 2232
Eco47I GGWCC 5 cut(s) 27, 134, 143, 461, 1739
Eco47III AGCGCT 2 cut(s) 836, 3800
Eco52I CGGCCG 2 cut(s) 170, 176
Eco53kI GAGCTC 1 cut(s) 843
Eco57I CTGAAG 4 cut(s) 576, 1311, 2367, 3861
Eco88I CYCGRG 1 cut(s) 3722
EcoICRI GAGCTC 1 cut(s) 843
EcoRI GAATTC 2 cut(s) 703, 1807
EcoRII CCWGG 2 cut(s) 1588, 2361
EcoT14I CCWWGG 4 cut(s) 918, 1554, 1605, 2748
EcoT38I GRGCYC 3 cut(s) 388, 845, 2232
ErhI CCWWGG 4 cut(s) 918, 1554, 1605, 2748
Esp3I CGTCTC 2 cut(s) 80, 236
FalI AAGNNNNNCTT 2 cut(s) 2461, 2493
FaqI GGGAC 5 cut(s) 13, 474, 1487, 2498, 3395
FauI CCCGC 3 cut(s) 211, 375, 1297
FauNDI CATATG 4 cut(s) 1621, 2950, 3772, 3985
FbaI TGATCA 3 cut(s) 499, 529, 1777
FblI GTMKAC 2 cut(s) 2690, 3864
FriOI GRGCYC 3 cut(s) 388, 845, 2232
FspI TGCGCA 1 cut(s) 2090
GlaI GCGC 4 cut(s) 358, 836, 2090, 3800
GsaI CCCAGC 1 cut(s) 252
GsuI CTGGAG 3 cut(s) 859, 1332, 1890
HaeII RGCGCY 3 cut(s) 360, 838, 3802
HapII CCGG 8 cut(s) 8, 25, 51, 236, 254, 458, 675, 2610
HgaI GACGC 5 cut(s) 29, 97, 2069, 3850, 3906
HhaI GCGC 4 cut(s) 359, 837, 2091, 3801
Hin1I GRCGYC 4 cut(s) 21, 89, 2080, 3861
Hin6I GCGC 4 cut(s) 357, 835, 2089, 3799
HinP1I GCGC 4 cut(s) 357, 835, 2089, 3799
HincII GTYRAC 2 cut(s) 262, 1840
HindII GTYRAC 2 cut(s) 262, 1840
HindIII AAGCTT 4 cut(s) 2316, 2475, 2708, 3270
HpaII CCGG 8 cut(s) 8, 25, 51, 236, 254, 458, 675, 2610
Hpy166II GTNNAC 9 cut(s) 262, 1152, 1840, 2691, 2864, 3119, 3491, 3730, 3865
Hpy8I GTNNAC 9 cut(s) 262, 1152, 1840, 2691, 2864, 3119, 3491, 3730, 3865
Hpy99I CGWCG 3 cut(s) 134, 142, 3519
HpyCH4IV ACGT 4 cut(s) 1932, 3115, 3517, 3856
HpyF10VI GCNNNNNNNGC 9 cut(s) 20, 245, 551, 1301, 1341, 2086, 2744, 3269, 3483
HpySE526I ACGT 4 cut(s) 1932, 3115, 3517, 3856
Hsp92I GRCGYC 4 cut(s) 21, 89, 2080, 3861
HspAI GCGC 4 cut(s) 357, 835, 2089, 3799
Kpn2I TCCGGA 1 cut(s) 2609
KpnI GGTACC 1 cut(s) 1122
KroI GCCGGC 2 cut(s) 7, 235
KroNI GCCGGC 2 cut(s) 9, 237
Ksp22I TGATCA 3 cut(s) 499, 529, 1777
KspI CCGCGG 1 cut(s) 176
LguI GCTCTTC 1 cut(s) 3349
LmnI GCTCC 8 cut(s) 550, 832, 840, 1721, 1871, 1898, 3184, 3482
LweI GCATC 9 cut(s) 1174, 1275, 1711, 2051, 2722, 3127, 3280, 3652, 3727
MaeII ACGT 4 cut(s) 1932, 3115, 3517, 3856
MaeIII GTNAC 9 cut(s) 156, 491, 779, 1051, 1106, 2242, 2796, 3106, 3443
MbiI CCGCTC 1 cut(s) 382
MfeI CAATTG 2 cut(s) 1254, 1843
MflI RGATCY 3 cut(s) 3050, 3218, 3787
MhlI GDGCHC 3 cut(s) 388, 845, 2232
MlsI TGGCCA 2 cut(s) 1534, 2498
MluNI TGGCCA 2 cut(s) 1534, 2498
MlyI GAGTC 3 cut(s) 638, 3741, 3898
MmeI TCCRAC 5 cut(s) 153, 968, 1294, 3938, 3956
Mox20I TGGCCA 2 cut(s) 1534, 2498
MreI CGCCGGCG 1 cut(s) 7
MroI TCCGGA 1 cut(s) 2609
MroNI GCCGGC 2 cut(s) 7, 235
MroXI GAANNNNTTC 2 cut(s) 2371, 3874
MscI TGGCCA 2 cut(s) 1534, 2498
MslI CAYNNNNRTG 5 cut(s) 1451, 1591, 2949, 3135, 3735
Msp20I TGGCCA 2 cut(s) 1534, 2498
MspA1I CMGCKG 3 cut(s) 175, 888, 1229
MspCI CTTAAG 1 cut(s) 2408
MspI CCGG 8 cut(s) 8, 25, 51, 236, 254, 458, 675, 2610
MspR9I CCNGG 4 cut(s) 25, 459, 1590, 2363
MunI CAATTG 2 cut(s) 1254, 1843
Mva1269I GAATGC 2 cut(s) 220, 556
MvaI CCWGG 2 cut(s) 1590, 2363
MvnI CGCG 1 cut(s) 175
MwoI GCNNNNNNNGC 9 cut(s) 20, 245, 551, 1301, 1341, 2086, 2744, 3269, 3483
NaeI GCCGGC 2 cut(s) 9, 237
NciI CCSGG 2 cut(s) 25, 459
NcoI CCATGG 1 cut(s) 1605
NdeI CATATG 4 cut(s) 1621, 2950, 3772, 3985
NgoMIV GCCGGC 2 cut(s) 7, 235
NheI GCTAGC 1 cut(s) 3398
NlaIV GGNNCC 8 cut(s) 29, 127, 144, 462, 673, 901, 1120, 1717
NmeAIII GCCGAG 4 cut(s) 148, 204, 2541, 3202
NmuCI GTSAC 5 cut(s) 156, 491, 779, 3106, 3443
NsbI TGCGCA 1 cut(s) 2090
PaeR7I CTCGAG 1 cut(s) 3722
PagI TCATGA 2 cut(s) 856, 2278
PasI CCCWGGG 1 cut(s) 2362
PceI AGGCCT 1 cut(s) 2768
PciSI GCTCTTC 1 cut(s) 3349
PctI GAATGC 2 cut(s) 220, 556
PdiI GCCGGC 2 cut(s) 9, 237
PdmI GAANNNNTTC 2 cut(s) 2371, 3874
PflMI CCANNNNNTGG 1 cut(s) 3274
PfoI TCCNGGA 1 cut(s) 457
PleI GAGTC 3 cut(s) 638, 3741, 3897
PpsI GAGTC 3 cut(s) 638, 3741, 3897
Ppu21I YACGTR 1 cut(s) 3116
PshAI GACNNNNGTC 1 cut(s) 3306
PshBI ATTAAT 1 cut(s) 1212
PsiI TTATAA 1 cut(s) 2135
Psp124BI GAGCTC 1 cut(s) 845
Psp6I CCWGG 2 cut(s) 1588, 2361
PspFI CCCAGC 1 cut(s) 248
PspGI CCWGG 2 cut(s) 1588, 2361
PspN4I GGNNCC 8 cut(s) 29, 127, 144, 462, 673, 901, 1120, 1717
PspPI GGNCC 8 cut(s) 27, 134, 143, 233, 251, 461, 1235, 1739
PsrI GAACNNNNNNTAC 2 cut(s) 883, 915
PstI CTGCAG 3 cut(s) 2056, 3262, 3308
PstNI CAGNNNCTG 2 cut(s) 1232, 1301
PsuI RGATCY 3 cut(s) 3050, 3218, 3787
PvuII CAGCTG 1 cut(s) 1229
RsaI GTAC 7 cut(s) 1078, 1120, 2379, 2588, 3426, 3490, 3780
RsaNI GTAC 7 cut(s) 1077, 1119, 2378, 2587, 3425, 3489, 3779
RseI CAYNNNNRTG 5 cut(s) 1451, 1591, 2949, 3135, 3735
Rsr2I CGGWCCG 1 cut(s) 134
RsrII CGGWCCG 1 cut(s) 134
SacI GAGCTC 1 cut(s) 845
SacII CCGCGG 1 cut(s) 176
SapI GCTCTTC 1 cut(s) 3349
Sau96I GGNCC 8 cut(s) 27, 134, 143, 233, 251, 461, 1235, 1739
ScaI AGTACT 2 cut(s) 1078, 3780
SchI GAGTC 3 cut(s) 638, 3741, 3898
ScrFI CCNGG 4 cut(s) 25, 459, 1590, 2363
SduI GDGCHC 3 cut(s) 388, 845, 2232
SfaNI GCATC 9 cut(s) 1174, 1275, 1711, 2051, 2722, 3127, 3280, 3652, 3727
SfcI CTRYAG 9 cut(s) 1632, 1665, 2052, 2428, 2727, 3258, 3304, 3865, 3907
Sfr274I CTCGAG 1 cut(s) 3722
Sfr303I CCGCGG 1 cut(s) 176
SgrAI CRCCGGYG 1 cut(s) 7
SgrBI CCGCGG 1 cut(s) 176
SinI GGWCC 5 cut(s) 27, 134, 143, 461, 1739
SlaI CTCGAG 1 cut(s) 3722
SmiMI CAYNNNNRTG 5 cut(s) 1451, 1591, 2949, 3135, 3735
SmlI CTYRAG 6 cut(s) 1965, 2408, 3029, 3638, 3722, 3815
SmoI CTYRAG 6 cut(s) 1965, 2408, 3029, 3638, 3722, 3815
SpeI ACTAGT 2 cut(s) 302, 1043
SseBI AGGCCT 1 cut(s) 2768
SspI AATATT 3 cut(s) 614, 1833, 3214
SstI GAGCTC 1 cut(s) 845
StuI AGGCCT 1 cut(s) 2768
StyD4I CCNGG 4 cut(s) 23, 457, 1588, 2361
StyI CCWWGG 4 cut(s) 918, 1554, 1605, 2748
TaiI ACGT 4 cut(s) 1935, 3118, 3520, 3859
TaqI TCGA 6 cut(s) 224, 522, 1652, 3514, 3723, 3939
TaqII GACCGA 1 cut(s) 478
TatI WGTACW 3 cut(s) 1076, 3424, 3778
TauI GCSGC 5 cut(s) 14, 17, 175, 178, 1769
TscAI CASTG 8 cut(s) 502, 1132, 1150, 1674, 1804, 2506, 2749, 3186
TseFI GTSAC 5 cut(s) 156, 491, 779, 3106, 3443
Tsp45I GTSAC 5 cut(s) 156, 491, 779, 3106, 3443
TspGWI ACGGA 3 cut(s) 126, 926, 3517
TspRI CASTG 8 cut(s) 502, 1132, 1150, 1674, 1804, 2506, 2749, 3186
Van91I CCANNNNNTGG 1 cut(s) 3274
Vha464I CTTAAG 1 cut(s) 2408
VpaK11BI GGWCC 5 cut(s) 27, 134, 143, 461, 1739
VspI ATTAAT 1 cut(s) 1212
XapI RAATTY 6 cut(s) 703, 818, 1760, 1807, 2545, 3562
XbaI TCTAGA 1 cut(s) 3350
XcmI CCANNNNNNNNNTGG 1 cut(s) 1091
XhoI CTCGAG 1 cut(s) 3722
XmiI GTMKAC 2 cut(s) 2690, 3864
XmnI GAANNNNTTC 2 cut(s) 2371, 3874
ZrmI AGTACT 2 cut(s) 1078, 3780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.